ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| basd2o05 | 596 | AV922903 | not_full | ref|NM_189333.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 | 44 | not_full | FTSY_AQUAE (O67066) Cell division protein ftsY homolog Length = 461 | 129 | -- | --- | - | -- | --- | - |
| basd2o02 | 619 | AV922902 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2o01 | 50 | AV836264 | not_full | gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, complete sequence Length = 158892 | 23 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2n24 | 407 | AV922901 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2n23 | 369 | AV922900 | not_full | ref|XM_465422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2750 | 24 | not_full | KEULE_ARATH (Q9C5X3) SNARE-interacting protein KEULE Length = 666 | 71 | -- | --- | - | -- | --- | - |
| basd2n22 | 642 | AV922899 | full | emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 | 195 | not_full | XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 | 86 | -- | --- | - | -- | --- | - |
| basd2n21 | 654 | AV922898 | not_full | ref|XM_472545.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 | 39 | not_full | GRPE_ANASP (Q8YUA7) Protein grpE (HSP-70 cofactor) Length = 248 | 137 | -- | --- | - | -- | --- | - |
| basd2n19 | 611 | AV922897 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_KLULA (Q6CQE5) Protein TAR1 Length = 109 | 2 | -- | --- | - | -- | --- | - |
| basd2n18 | 447 | AV922896 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 262 | not_full | NAC19_ARATH (Q9C932) NAC domain-containing protein 19 (ANAC019) (ANAC) (Abscicic-acid-responsive NAC) Length = 317 | 26 | -- | --- | - | -- | --- | - |
| basd2n17 | 573 | AV922895 | not_full | emb|X94296.1|HVRL24E H.vulgare mRNA for L24 ribosomal protein Length = 708 | 243 | not_full | RL24_HORVU (P50888) 60S ribosomal protein L24 Length = 162 | 30 | -- | --- | - | -- | --- | - |
| basd2n16 | 455 | AV922894 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 24 | not_full | TIPT_DROME (Q9U3V5) Protein tiptop Length = 1024 | 12 | -- | --- | - | -- | --- | - |
| basd2n15 | 348 | AV922893 | not_full | ref|XM_801227.1| Trypanosoma cruzi strain CL Brener tubulin folding cofactor D (Tc00.1047053511067.10) partial mRNA Length = 3945 | 500 | not_full | LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) Length = 1487 | 13 | -- | --- | - | -- | --- | - |
| basd2n14 | 632 | AV836263 | not_full | gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026G02, complete sequence Length = 123472 | 35 | not_full | RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2 Length = 1271 | 60 | -- | --- | - | -- | --- | - |
| basd2n13 | 107 | AV922892 | not_full | gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 | 60 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 53 | -- | --- | - | -- | --- | - |
| basd2n11 | 597 | AV922891 | not_full | dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 | 367 | not_full | RS4_MAIZE (O22424) 40S ribosomal protein S4 Length = 265 | 82 | -- | --- | - | -- | --- | - |
| basd2n10 | 693 | AV922890 | not_full | ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3112 | 117 | not_full | IFEB_HELPO (P16275) Non-neuronal cytoplasmic intermediate filament protein B (IFB) Length = 450 | 10 | -- | --- | - | -- | --- | - |
| basd2n08 | 701 | AV922889 | not_full | ref|XM_477069.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 | 71 | not_full | YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-) Length = 598 | 31 | -- | --- | - | -- | --- | - |
| basd2n07 | 644 | AV922888 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2n06 | 54 | AV836262 | not_full | ref|XM_754008.1| Ustilago maydis 521 hypothetical protein (UM02954.1) partial mRNA Length = 5052 | 4 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2n05 | 657 | AV922887 | not_full | ref|XM_464102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3311 | 48 | not_full | GAL1_PASMU (P57899) Galactokinase (EC 2.7.1.6) (Galactose kinase) Length = 385 | 34 | -- | --- | - | -- | --- | - |
| basd2n03 | 593 | AV922886 | not_full | gb|AF262984.1|AF262984 Triticum aestivum cyclophilin A-3 (CyP3) mRNA, complete cds Length = 869 | 500 | not_full | CYPH_MAIZE (P21569) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) Length = 172 | 220 | -- | --- | - | -- | --- | - |
| basd2m23 | 628 | AV922885 | not_full | gb|DQ128063.1| Triticum monococcum clone tm3-1, genomic sequence Length = 499 | 22 | not_full | PRIC1_RAT (Q71QF9) Prickle-like protein 1 (REST/NRSF-interacting LIM domain protein 1) Length = 831 | 8 | -- | --- | - | -- | --- | - |
| basd2m22 | 553 | AV922884 | full | emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor Length = 498 | 28 | not_full | IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1 precursor Length = 102 | 21 | -- | --- | - | -- | --- | - |
| basd2m21 | 563 | AV922883 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 3 | -- | --- | - | -- | --- | - |
| basd2m20 | 410 | AV922882 | not_full | emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 | 44 | full | CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 | 91 | -- | --- | - | -- | --- | - |
| basd2m19 | 373 | AV922881 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 99 | not_full | MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C Length = 162 | 20 | -- | --- | - | -- | --- | - |
| basd2m18 | 954 | AV922880 | not_full | gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 162 | -- | --- | - | -- | --- | - |
| basd2m17 | 599 | AV922879 | not_full | gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 | 500 | not_full | CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase) (Choline acetylase) (ChAT) Length = 748 | 3 | -- | --- | - | -- | --- | - |
| basd2m15 | 466 | AV922878 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | POF13_SCHPO (O94334) F-box protein pof13 Length = 396 | 10 | -- | --- | - | -- | --- | - |
| basd2m11 | 127 | AV922877 | not_full | ref|XM_470212.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 633 | 34 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2m05 | 544 | AV922876 | not_full | emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 | 148 | not_full | NLT41_HORVU (Q43767) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1) (CW21) (CW-21) Length = 115 | 76 | -- | --- | - | -- | --- | - |
| basd2m04 | 38 | AV836261 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2m03 | 602 | AV922875 | not_full | dbj|AK099449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022F08, full insert sequence Length = 829 | 57 | not_full | CI085_RAT (Q68FU5) Protein C9orf85 homolog Length = 155 | 19 | -- | --- | - | -- | --- | - |
| basd2m01 | 385 | AV836260 | not_full | dbj|AK066934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A09, full insert sequence Length = 2372 | 32 | not_full | ACOX3_ARATH (Q9LLH9) Acyl-coenzyme A oxidase 3, peroxisomal precursor (EC 1.3.3.6) (AOX 3) (Medium-chain acyl-CoA oxidase) (AtCX3) Length = 675 | 42 | -- | --- | - | -- | --- | - |
| basd2l23 | 58 | AV836259 | not_full | dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 | 13 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2l22 | 555 | AV836258 | not_full | gb|BC071110.1| Xenopus laevis MGC81280 protein, mRNA (cDNA clone MGC:81280 IMAGE:6631808), complete cds Length = 1877 | 51 | not_full | YO125_YEAST (Q12383) Uncharacterized protein YOL125W Length = 476 | 3 | -- | --- | - | -- | --- | - |
| basd2l16 | 599 | AV922874 | not_full | gb|BC060367.1| Xenopus laevis hypothetical protein MGC68803, mRNA (cDNA clone MGC:68803 IMAGE:4203518), complete cds Length = 3740 | 443 | not_full | GLK_RHIME (Q92T27) Glucokinase (EC 2.7.1.2) (Glucose kinase) Length = 339 | 1 | -- | --- | - | -- | --- | - |
| basd2l15 | 340 | AV922873 | not_full | ref|XM_482032.1| Oryza sativa (japonica cultivar-group), mRNA Length = 638 | 500 | not_full | LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) Length = 1487 | 13 | -- | --- | - | -- | --- | - |
| basd2l13 | 391 | AV922872 | not_full | ref|NM_112003.2| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / tRNA ligase AT3G11710 mRNA, complete cds Length = 2155 | 251 | not_full | SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) Length = 602 | 85 | -- | --- | - | -- | --- | - |
| basd2l11 | 532 | AV922871 | not_full | gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds Length = 842 | 9 | not_full | WIR1A_WHEAT (Q01482) WIR1A protein Length = 88 | 41 | -- | --- | - | -- | --- | - |
| basd2l07 | 309 | AV922870 | not_full | gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 | 258 | not_full | PI5K1_ORYSA (Q6EX42) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) Length = 801 | 16 | -- | --- | - | -- | --- | - |
| basd2l05 | 43 | AV836257 | not_full | ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 | 89 | not_full | CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor (LHCII type I CAB-1B) (LHCP) Length = 265 | 55 | -- | --- | - | -- | --- | - |
| basd2l03 | 451 | AV922869 | not_full | gb|AY552749.1| Hordeum vulgare subsp. vulgare 18S ribosomal RNA gene, partial sequence Length = 1014 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2l01 | 638 | AV922868 | not_full | dbj|AK111922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B03, full insert sequence Length = 1093 | 291 | full | KC1D_ARATH (P42158) Casein kinase I isoform delta-like (EC 2.7.11.1) (CKI-delta) Length = 450 | 500 | -- | --- | - | -- | --- | - |
| basd2k24 | 455 | AV836256 | not_full | dbj|AP000942.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-864G5, complete sequence Length = 185984 | 99 | not_full | HAP28_HUMAN (Q13442) 28 kDa heat- and acid-stable phosphoprotein (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) Length = 181 | 9 | -- | --- | - | -- | --- | - |
| basd2k23 | 335 | AV922867 | not_full | dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 | 58 | not_full | ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-) Length = 471 | 146 | -- | --- | - | -- | --- | - |
| basd2k22 | 466 | AV922866 | not_full | emb|AJ517224.1|EAT517224 Elymus athericus microsatellite DNA, isolate Schiermonnikoog_K2 Length = 267 | 500 | full | ICI2_HORVU (P01053) Subtilisin-chymotrypsin inhibitor-2A (CI-2A) Length = 83 | 46 | -- | --- | - | -- | --- | - |
| basd2k21 | 477 | AV922865 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2k20 | 188 | AV922864 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | E41LA_HUMAN (Q9HCS5) Band 4.1-like protein 4A (NBL4 protein) Length = 598 | 4 | -- | --- | - | -- | --- | - |
| basd2k18 | 442 | AV922863 | not_full | gb|AC157977.1| Genomic sequence for Zea mays chromosome 8 BAC clone ZMMBBb0284N04, complete sequence Length = 107631 | 34 | not_full | YHW2_YEAST (P38857) UPF0041 protein YHR162w Length = 129 | 9 | -- | --- | - | -- | --- | - |
