ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2k20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E41LA_HUMAN (Q9HCS5) Band 4.1-like protein 4A (NBL4 protein) 29 3.0
2FAEB_ASPNG (Q8WZI8) Feruloyl esterase B precursor (EC 3.1.1.73) ... 28 5.1
3YR01_CAEEL (Q10014) Hypothetical protein T25E4.1 precursor 28 5.1
4ALS2_MOUSE (Q920R0) Alsin (Amyotrophic lateral sclerosis protein... 28 8.7

>E41LA_HUMAN (Q9HCS5) Band 4.1-like protein 4A (NBL4 protein)|
          Length = 598

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 176 RSPRFGSISSDNRPIKTRFRYGSGGFRSLNQATAYESPAHSSTGTRSEITFPSH 15
           R+P  GS +   +P++ R  + SG    L Q     S  ++S+G+ SE +   H
Sbjct: 443 RNPSCGSDNDSVQPVRRRKAHNSGEDSDLKQRRRSRSRCNTSSGSESENSNREH 496



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>FAEB_ASPNG (Q8WZI8) Feruloyl esterase B precursor (EC 3.1.1.73) (Ferulic acid|
           esterase B) (FAEB) (FAE-I) (Cinnamoyl esterase) (CinnAE)
          Length = 521

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 39  PRAC*RMSRRLIGSGLVKGTEPTGAVAKASLNRAIVTAYGPE 164
           P  C  +  RLI  G   GT        A +NRA+   YGP+
Sbjct: 267 PDFCAPVIERLICDGTTNGTSCITGAQAAKVNRALSDFYGPD 308



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>YR01_CAEEL (Q10014) Hypothetical protein T25E4.1 precursor|
          Length = 231

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 157 P*AVTIALLRLAFATAPVGSVPLTKPLPMSRRLI 56
           P A   AL+R AFA  PV + P   P+P++  ++
Sbjct: 55  PVAAAPALVRPAFAPVPVAAAPAFAPVPVAAPMV 88



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>ALS2_MOUSE (Q920R0) Alsin (Amyotrophic lateral sclerosis protein 2 homolog)|
          Length = 1651

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 136  LLRLAFATAPV--GSVPLTKPLPMSRRLILQQARGQRSLSPPTGW 8
            L+R  F   P    ++PL+ PLP  RR         RS SP  G+
Sbjct: 1419 LVRFLFPELPEEGSTIPLSAPLPTGRRSFCTGKSDSRSESPEPGY 1463


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,543,910
Number of Sequences: 219361
Number of extensions: 502899
Number of successful extensions: 1338
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 80,573,946
effective HSP length: 38
effective length of database: 72,238,228
effective search space used: 1733717472
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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