Clone Name | basd2o01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, complete sequence Length = 158892 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 gagcacccaactggtcttc 29 ||||||||||||||||||| Sbjct: 78274 gagcacccaactggtcttc 78292
>gb|AC160054.2| Gallus gallus BAC clone TAM32-10H18 from chromosome unknown, complete sequence Length = 173827 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 cagcaaatgggagcaccca 19 ||||||||||||||||||| Sbjct: 22045 cagcaaatgggagcaccca 22063
>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence Length = 191541 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 gagcacccaactggtcttc 29 ||||||||||||||||||| Sbjct: 110493 gagcacccaactggtcttc 110511
>gb|AC115691.8| Mus musculus chromosome 18, clone RP24-286B14, complete sequence Length = 175016 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaactggtcttcagatc 34 |||||||||||||||||| Sbjct: 26151 ccaactggtcttcagatc 26168
>gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosome 10, complete sequence Length = 183115 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 11 gagcacccaactggtcttcaga 32 |||||||| ||||||||||||| Sbjct: 141040 gagcacccgactggtcttcaga 141061
>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence Length = 192584 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 117437 gagcacccaactgctcttcaga 117416
>gb|AC125157.4| Mus musculus BAC clone RP24-390G17 from chromosome 18, complete sequence Length = 207265 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaactggtcttcagatc 34 |||||||||||||||||| Sbjct: 79245 ccaactggtcttcagatc 79262
>gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosome 17, complete sequence Length = 204354 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 17358 gagcacccaactgttcttcaga 17337
>gb|AC114004.5| Mus musculus BAC clone RP23-174P2 from 7, complete sequence Length = 187196 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 175583 gagcacccaactgctcttcaga 175562
>gb|AC124531.5| Mus musculus BAC clone RP23-299D2 from 7, complete sequence Length = 191228 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 156378 gagcacccaactgctcttcaga 156357
>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence Length = 202340 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 16149 gagcacccaactgttcttcaga 16170
>gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosome 10, complete sequence Length = 175812 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 |||||||| ||||||||||||| Sbjct: 169860 gagcacccgactggtcttcaga 169839
>emb|AL080286.16|HSDJ655C4 Human DNA sequence from clone RP4-655C4 on chromosome 1p32.3-34.3 Contains a ferritin light polypeptide (FTL) pseudogene, complete sequence Length = 155278 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ggagcacccaactggtct 27 |||||||||||||||||| Sbjct: 47458 ggagcacccaactggtct 47441
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 33 tccaatgcaagcgttggg 50 |||||||||||||||||| Sbjct: 2587156 tccaatgcaagcgttggg 2587139
>gb|AC022690.6| Homo sapiens chromosome 8, clone RP11-480O10, complete sequence Length = 178316 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 22 tggtcttcagatccaatg 39 |||||||||||||||||| Sbjct: 93869 tggtcttcagatccaatg 93886
>dbj|AK086038.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830048A06 product:unclassifiable, full insert sequence Length = 3371 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 |||||||| ||||||||||||| Sbjct: 1896 gagcacccgactggtcttcaga 1875
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 actggtcttcagatccaa 37 |||||||||||||||||| Sbjct: 15634401 actggtcttcagatccaa 15634418
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 actggtcttcagatccaa 37 |||||||||||||||||| Sbjct: 25708 actggtcttcagatccaa 25725
>emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chromosome 2, complete sequence Length = 222104 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 21 ctggtcttcagatccaat 38 |||||||||||||||||| Sbjct: 213597 ctggtcttcagatccaat 213614
>gb|AC134825.5| Mus musculus BAC clone RP24-456L17 from 9, complete sequence Length = 173663 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 112458 gagcacccaactgctcttcaga 112437
>gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, complete sequence Length = 216721 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 159787 gagcacccaactgttcttcaga 159766
>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence Length = 211504 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 gagcacccaactggtcttcaga 32 ||||||||||||| |||||||| Sbjct: 84515 gagcacccaactgctcttcaga 84494
>emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on chromosome 2, complete sequence Length = 209013 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 21 ctggtcttcagatccaat 38 |||||||||||||||||| Sbjct: 65190 ctggtcttcagatccaat 65207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 276,254 Number of Sequences: 3902068 Number of extensions: 276254 Number of successful extensions: 71151 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71084 Number of HSP's gapped (non-prelim): 67 length of query: 50 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 30 effective length of database: 17,155,003,908 effective search space: 514650117240 effective search space used: 514650117240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)