>B4GT2_MOUSE (Q9Z2Y2) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.-)|
(Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2)
(UDP-galactose:beta-N-acetylglucosamine
beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
beta-1,4-galactosyltransferase 2) [Includes: L
Length = 369
Score = 30.8 bits (68), Expect = 3.4
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 94 TPAA*IWPASSSITSPSNPRANSVSAGLSIEIPLHPKHRPLEFGVVVDVVP 246
+PA ++PA+SS T+ S P A + S+GL P P RP G V+P
Sbjct: 49 SPAHALYPAASSSTNCSRPNATAASSGL----PEVPSARP---GPTAPVIP 92
>B4GT2_CRIGR (Q80WN9) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.-)|
(Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2)
(UDP-galactose:beta-N-acetylglucosamine
beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
beta-1,4-galactosyltransferase 2) [Includes: L
Length = 369
Score = 30.0 bits (66), Expect = 5.8
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 94 TPAA*IWPASSSITSPSNPRANSVSAGLSIEIPLHPKHRPLEFGVVVDVVP 246
+PA ++PA+SS T+ S P A + S+GL P P RP G V+P
Sbjct: 49 SPAHALYPAASSSTNCSRPNATASSSGL----PEVPSARP---GPTAPVIP 92
>MARE2_XENLA (Q7ZXP1) Microtubule-associated protein RP/EB family member 2|
Length = 327
Score = 29.3 bits (64), Expect = 10.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 111 NLSCGGASTWANLAEAGNKPGRPKAGKKALPSPS 10
N GA+ + +A+ G+ RP + KKA+P PS
Sbjct: 198 NSPTAGAARSSPIAKPGSTSSRPSSAKKAVPCPS 231
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,212,576
Number of Sequences: 219361
Number of extensions: 2023269
Number of successful extensions: 5660
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5656
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)