Clone Name | basd2n10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3112 Score = 214 bits (108), Expect = 3e-52 Identities = 273/328 (83%) Strand = Plus / Plus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 248 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 307 Query: 236 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 295 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 308 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 367 Query: 296 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 355 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 368 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 427 Query: 356 agtttggccctgatgctgacttcattctcacttacactgatgaggatggggatgttgtca 415 ||||||| | |||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 428 agtttggttcggatgtcgacttcattctgacttacactgatgaggatggggatattgtca 487 Query: 416 tgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctca 475 ||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| |||| Sbjct: 488 tgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctca 547 Query: 476 ggattaatgttcaggtaaagaatagcca 503 |||||||||||||| |||| || ||||| Sbjct: 548 ggattaatgttcagttaaacaacagcca 575 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 69 ccgccgctgcggctcacggctacgcagctctc 100
>ref|XM_506848.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016G10.28-1 mRNA Length = 3152 Score = 214 bits (108), Expect = 3e-52 Identities = 273/328 (83%) Strand = Plus / Plus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 288 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 347 Query: 236 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 295 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 348 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 407 Query: 296 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 355 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 408 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 467 Query: 356 agtttggccctgatgctgacttcattctcacttacactgatgaggatggggatgttgtca 415 ||||||| | |||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 468 agtttggttcggatgtcgacttcattctgacttacactgatgaggatggggatattgtca 527 Query: 416 tgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctca 475 ||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| |||| Sbjct: 528 tgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctca 587 Query: 476 ggattaatgttcaggtaaagaatagcca 503 |||||||||||||| |||| || ||||| Sbjct: 588 ggattaatgttcagttaaacaacagcca 615 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 109 ccgccgctgcggctcacggctacgcagctctc 140
>dbj|AK099686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E12, full insert sequence Length = 3112 Score = 214 bits (108), Expect = 3e-52 Identities = 273/328 (83%) Strand = Plus / Plus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 248 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 307 Query: 236 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 295 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 308 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 367 Query: 296 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 355 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 368 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 427 Query: 356 agtttggccctgatgctgacttcattctcacttacactgatgaggatggggatgttgtca 415 ||||||| | |||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 428 agtttggttcggatgtcgacttcattctgacttacactgatgaggatggggatattgtca 487 Query: 416 tgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctca 475 ||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| |||| Sbjct: 488 tgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctca 547 Query: 476 ggattaatgttcaggtaaagaatagcca 503 |||||||||||||| |||| || ||||| Sbjct: 548 ggattaatgttcagttaaacaacagcca 575 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 69 ccgccgctgcggctcacggctacgcagctctc 100
>dbj|AK072838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141P19, full insert sequence Length = 3149 Score = 186 bits (94), Expect = 7e-44 Identities = 270/328 (82%), Gaps = 3/328 (0%) Strand = Plus / Plus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 288 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 347 Query: 236 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 295 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 348 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 407 Query: 296 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 355 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 408 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 467 Query: 356 agtttggccctgatgctgacttcattctcacttacactgatgaggatggggatgttgtca 415 ||||||| | |||| ||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 468 agtttggttcggatgtcgacttcattctgacttacactgatgagg---gggatattgtca 524 Query: 416 tgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctca 475 ||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| |||| Sbjct: 525 tgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctca 584 Query: 476 ggattaatgttcaggtaaagaatagcca 503 |||||||||||||| |||| || ||||| Sbjct: 585 ggattaatgttcagttaaacaacagcca 612 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 109 ccgccgctgcggctcacggctacgcagctctc 140
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 176 bits (89), Expect = 6e-41 Identities = 206/245 (84%) Strand = Plus / Minus Query: 259 tatggtgacacacttaagaggttcaatggctatgtcaacggaacacacttcactttgaat 318 |||||||| || |||||||||||| ||| ||||| | ||| |||| |||| |||| Sbjct: 23004653 tatggtgaaactcttaagaggttcggtgggtatgtgcaaggaccacaattcagcctgaac 23004594 Query: 319 ctatctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttc 378 |||| ||||| || ||||| |||||| ||||||||||||||| | |||| |||||| Sbjct: 23004593 ttatccgctctccggtccaagattgcatctgcttttaagtttggttcggatgtcgacttc 23004534 Query: 379 attctcacttacactgatgaggatggggatgttgtcatgctggacgatgacgaggacttg 438 ||||| |||||||||||||||||||||||| ||||||||||||| ||||| || || || Sbjct: 23004533 attctgacttacactgatgaggatggggatattgtcatgctggatgatgatgatgatctg 23004474 Query: 439 catgatgcagctatccatcagaaactgaaccctctcaggattaatgttcaggtaaagaat 498 |||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 23004473 catgatgctgctattcatcagaaactgaaccccctcaggattaatgttcagttaaacaac 23004414 Query: 499 agcca 503 ||||| Sbjct: 23004413 agcca 23004409 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 23006876 ccgccgctgcggctcacggctacgcagctctc 23006845 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 23006697 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 23006638 Query: 236 gggacgtcgtcgtcaaggt 254 ||||||||||| ||||||| Sbjct: 23006637 gggacgtcgtcctcaaggt 23006619 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ccgtcccccatgccaccaccaccgc 26 ||||| ||||||||||||||||||| Sbjct: 27747661 ccgtcgcccatgccaccaccaccgc 27747637
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 176 bits (89), Expect = 6e-41 Identities = 206/245 (84%) Strand = Plus / Minus Query: 259 tatggtgacacacttaagaggttcaatggctatgtcaacggaacacacttcactttgaat 318 |||||||| || |||||||||||| ||| ||||| | ||| |||| |||| |||| Sbjct: 29050 tatggtgaaactcttaagaggttcggtgggtatgtgcaaggaccacaattcagcctgaac 28991 Query: 319 ctatctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttc 378 |||| ||||| || ||||| |||||| ||||||||||||||| | |||| |||||| Sbjct: 28990 ttatccgctctccggtccaagattgcatctgcttttaagtttggttcggatgtcgacttc 28931 Query: 379 attctcacttacactgatgaggatggggatgttgtcatgctggacgatgacgaggacttg 438 ||||| |||||||||||||||||||||||| ||||||||||||| ||||| || || || Sbjct: 28930 attctgacttacactgatgaggatggggatattgtcatgctggatgatgatgatgatctg 28871 Query: 439 catgatgcagctatccatcagaaactgaaccctctcaggattaatgttcaggtaaagaat 498 |||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 28870 catgatgctgctattcatcagaaactgaaccccctcaggattaatgttcagttaaacaac 28811 Query: 499 agcca 503 ||||| Sbjct: 28810 agcca 28806 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 31273 ccgccgctgcggctcacggctacgcagctctc 31242 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 31094 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 31035 Query: 236 gggacgtcgtcgtcaaggt 254 ||||||||||| ||||||| Sbjct: 31034 gggacgtcgtcctcaaggt 31016
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 176 bits (89), Expect = 6e-41 Identities = 206/245 (84%) Strand = Plus / Minus Query: 259 tatggtgacacacttaagaggttcaatggctatgtcaacggaacacacttcactttgaat 318 |||||||| || |||||||||||| ||| ||||| | ||| |||| |||| |||| Sbjct: 124455 tatggtgaaactcttaagaggttcggtgggtatgtgcaaggaccacaattcagcctgaac 124396 Query: 319 ctatctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttc 378 |||| ||||| || ||||| |||||| ||||||||||||||| | |||| |||||| Sbjct: 124395 ttatccgctctccggtccaagattgcatctgcttttaagtttggttcggatgtcgacttc 124336 Query: 379 attctcacttacactgatgaggatggggatgttgtcatgctggacgatgacgaggacttg 438 ||||| |||||||||||||||||||||||| ||||||||||||| ||||| || || || Sbjct: 124335 attctgacttacactgatgaggatggggatattgtcatgctggatgatgatgatgatctg 124276 Query: 439 catgatgcagctatccatcagaaactgaaccctctcaggattaatgttcaggtaaagaat 498 |||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 124275 catgatgctgctattcatcagaaactgaaccccctcaggattaatgttcagttaaacaac 124216 Query: 499 agcca 503 ||||| Sbjct: 124215 agcca 124211 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 23 ccgccgctgcggcttacggctacgcagctctc 54 |||||||||||||| ||||||||||||||||| Sbjct: 126678 ccgccgctgcggctcacggctacgcagctctc 126647 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 176 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 235 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 126499 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 126440 Query: 236 gggacgtcgtcgtcaaggt 254 ||||||||||| ||||||| Sbjct: 126439 gggacgtcgtcctcaaggt 126421
>gb|AY596599.1| Saccharum officinarum clone SCEPLR1008G04, complete sequence Length = 3065 Score = 113 bits (57), Expect = 8e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 352 tttaagtttggccctgatgctgacttcattctcacttacactgatgaggatggggatgtt 411 ||||||||||| |||||||||||||| |||| |||||| | ||||||||||| ||| || Sbjct: 371 tttaagtttggtgctgatgctgacttcgttctgacttacgccgatgaggatggtgatatt 430 Query: 412 gtcatgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccct 471 |||||||| || ||||| || ||||||| |||||||||| | | ||||||| | |||||| Sbjct: 431 gtcatgctagatgatgatgatgacttgcgtgatgcagctctgcgtcagaaattaaaccct 490 Query: 472 ctcaggattaatgttca 488 || ||||||| |||||| Sbjct: 491 ctgaggattactgttca 507 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 14 ccaccaccaccgccgctgcggcttacggctacgcagc 50 ||||||||||| | ||||||||| ||||||||||||| Sbjct: 15 ccaccaccaccactgctgcggctcacggctacgcagc 51 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 235 tgggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggtt 281 ||||||||| | ||||||||||||||||||| || ||||| ||||| Sbjct: 254 tgggacgtcaccttcaaggtcaaatatggtgatacgcttaaaaggtt 300
>ref|XM_472873.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2646 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 323 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 382 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 134 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 193 Query: 383 tcacttacactgatgaggatggggatgttgtcatgctggacgatga 428 |||| || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 194 tcacctatactgatgaggatggggatgttgtcatactggatgatga 239
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 323 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 382 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 11103 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 11044 Query: 383 tcacttacactgatgaggatggggatgttgtcatgctggacgatga 428 |||| || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 11043 tcacctatactgatgaggatggggatgttgtcatactggatgatga 10998
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 323 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 382 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 23846230 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 23846171 Query: 383 tcacttacactgatgaggatggggatgttgtcatgctggacgatga 428 |||| || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 23846170 tcacctatactgatgaggatggggatgttgtcatactggatgatga 23846125
>dbj|AK070908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064I21, full insert sequence Length = 3123 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 323 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 382 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 266 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 325 Query: 383 tcacttacactgatgaggatggggatgttgtcatgctggacgatga 428 |||| || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 326 tcacctatactgatgaggatggggatgttgtcatactggatgatga 371
>ref|NM_118602.3| Arabidopsis thaliana zinc ion binding AT4G24690 mRNA, complete cds Length = 2604 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 309 gatgctgaattgagtctgacttactctgatgaggatggggatgt 352
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 16005 gatgctgaattgagtctgacttactctgatgaggatggggatgt 16048
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 39503 gatgctgaattgagtctgacttactctgatgaggatggggatgt 39460
>gb|BT008425.1| Arabidopsis thaliana At4g24690 gene, complete cds Length = 2115 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 151 gatgctgaattgagtctgacttactctgatgaggatggggatgt 194
>gb|AY140081.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2438 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 286 gatgctgaattgagtctgacttactctgatgaggatggggatgt 329
>gb|AY128759.1| Arabidopsis thaliana putative protein (At4g24690) mRNA, complete cds Length = 2144 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 151 gatgctgaattgagtctgacttactctgatgaggatggggatgt 194
>gb|AY062827.1| Arabidopsis thaliana putative protein (At4g24690; F22K18.110) mRNA, complete cds Length = 2283 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 367 gatgctgacttcattctcacttacactgatgaggatggggatgt 410 |||||||| || | ||| |||||| ||||||||||||||||||| Sbjct: 229 gatgctgaattgagtctgacttactctgatgaggatggggatgt 272
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgcggc 35 ||||||||||||||||||||||| Sbjct: 301582 gccaccaccaccgccgctgcggc 301560
>dbj|AB044554.1| Staphylococcus aureus prophage phiPV83 proviral DNA, complete sequence Length = 45636 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 332 gttccaaaattgcaagtgctttt 354 ||||||||||||||||||||||| Sbjct: 3767 gttccaaaattgcaagtgctttt 3745
>gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J24, complete sequence Length = 184118 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 454 catcagaaactgaaccctctca 475 |||||||||||||||||||||| Sbjct: 144237 catcagaaactgaaccctctca 144216
>gb|AC008935.8|AC008935 Homo sapiens chromosome 5 clone CTD-2308L13, complete sequence Length = 102477 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 454 catcagaaactgaaccctctca 475 |||||||||||||||||||||| Sbjct: 47232 catcagaaactgaaccctctca 47253
>ref|XM_479614.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcgcgtccctcgacgccgccg 73 ||||||||||||||||||||| Sbjct: 495 tcgcgtccctcgacgccgccg 515
>ref|XM_957679.1| Neurospora crassa OR74A hypothetical protein (NCU05667.1) partial mRNA Length = 660 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 387 tgccaccaccaccgccgctgc 407
>ref|XM_325521.1| Neurospora crassa OR74A hypothetical protein (NCU05667.1) partial mRNA Length = 660 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 387 tgccaccaccaccgccgctgc 407
>ref|NM_018774.1| Mus musculus polyhomeotic-like 2 (Drosophila) (Phc2), mRNA Length = 3832 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 174 tgccaccaccaccgccgctgc 154
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 581 agataaaatcagtaattgatg 601 ||||||||||||||||||||| Sbjct: 39923 agataaaatcagtaattgatg 39943
>emb|AJ493263.1|ABA493263 Acipenser baeri partial mRNA for keratin type IIE (krt2 gene) Length = 1835 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 1413 tgccaccaccaccgccgctgc 1393
>dbj|AK051465.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130050K19 product:polyhomeotic-like 2 (Drosophila), full insert sequence Length = 775 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 278 tgccaccaccaccgccgctgc 258
>tpg|BK004879.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) growth-regulating factor 10 (GRF10) gene, complete cds Length = 4980 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 ccgtcccccatgccaccaccaccgc 26 ||||| ||||||||||||||||||| Sbjct: 2652 ccgtcgcccatgccaccaccaccgc 2676
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tcgcgtccctcgacgccgccg 73 ||||||||||||||||||||| Sbjct: 29365036 tcgcgtccctcgacgccgccg 29365016
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 ccctcgacgccgccgccgctg 79 ||||||||||||||||||||| Sbjct: 5175256 ccctcgacgccgccgccgctg 5175276
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ccgtcccccatgccaccaccaccgc 26 ||||| ||||||||||||||||||| Sbjct: 32994 ccgtcgcccatgccaccaccaccgc 32970
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ccgtcccccatgccaccaccaccgc 26 ||||| ||||||||||||||||||| Sbjct: 133527 ccgtcgcccatgccaccaccaccgc 133503
>dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B21, full insert sequence Length = 1221 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcgcgtccctcgacgccgccg 73 ||||||||||||||||||||| Sbjct: 495 tcgcgtccctcgacgccgccg 515
>gb|BC057571.1| Mus musculus polyhomeotic-like 2 (Drosophila), mRNA (cDNA clone MGC:66958 IMAGE:6410302), complete cds Length = 3897 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 220 tgccaccaccaccgccgctgc 200
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tcgcgtccctcgacgccgccg 73 ||||||||||||||||||||| Sbjct: 27958 tcgcgtccctcgacgccgccg 27938
>gb|U81491.1|MMU81491 Mus musculus polyhomeotic (mPh2) mRNA, complete cds Length = 3832 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 174 tgccaccaccaccgccgctgc 154
>gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complete sequence Length = 212677 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 16591 tgccaccaccaccgccgctgc 16611
>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete sequence Length = 174305 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 167670 tgccaccaccaccgccgctgc 167650
>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence Length = 173511 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgccaccaccaccgccgctgc 32 ||||||||||||||||||||| Sbjct: 89226 tgccaccaccaccgccgctgc 89206
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 196549 gccaccaccaccgccgctgc 196530
>ref|XM_528644.1| PREDICTED: Pan troglodytes DnaJ subfamily A member 2 (LOC473274), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 907 ccatgccaccacctccgccgctgc 884
>ref|XM_521048.1| PREDICTED: Pan troglodytes similar to Histone-lysine N-methyltransferase, H3 lysine-9 specific 1 (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog 1) (Su(var)3-9 homolog 1) (LOC465618), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 397 cccatgccaccaccaccgcc 416
>ref|NM_187500.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 cgcgtccctcgacgccgccgccgc 77 ||||||| |||||||||||||||| Sbjct: 1167 cgcgtccatcgacgccgccgccgc 1144
>ref|NM_006721.2| Homo sapiens adenosine kinase (ADK), transcript variant ADK-long, mRNA Length = 2018 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 700 ttcactttgaatctatctgc 719
>ref|NM_001123.2| Homo sapiens adenosine kinase (ADK), transcript variant ADK-short, mRNA Length = 2082 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 764 ttcactttgaatctatctgc 783
>ref|NM_010135.1| Mus musculus enabled homolog (Drosophila) (Enah), mRNA Length = 2899 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 1492 gccaccaccaccgccgctgc 1511
>gb|AC115618.3| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete sequence Length = 158454 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 126904 cccatgccaccaccaccgcc 126923
>gb|AF196970.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 112600 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 36701 cccatgccaccaccaccgcc 36720
>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11, complete sequence Length = 103615 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 12719 gccaccaccaccgccgctgc 12738
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 98792 gccaccaccaccgccgctgc 98811
>gb|BC015809.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 2, mRNA (cDNA clone MGC:9488 IMAGE:3922477), complete cds Length = 2023 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 348 ccatgccaccacctccgccgctgc 325
>gb|BC003568.1| Homo sapiens adenosine kinase, transcript variant ADK-short, mRNA (cDNA clone MGC:2085 IMAGE:3544131), complete cds Length = 1414 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 676 ttcactttgaatctatctgc 695
>gb|BC012738.2| Homo sapiens Wiskott-Aldrich syndrome (eczema-thrombocytopenia), mRNA (cDNA clone MGC:15218 IMAGE:3688197), complete cds Length = 1814 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1202 cccatgccaccaccaccgcc 1221
>ref|NM_000377.1| Homo sapiens Wiskott-Aldrich syndrome (eczema-thrombocytopenia) (WAS), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1208 cccatgccaccaccaccgcc 1227
>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence Length = 197949 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 143836 gccaccaccaccgccgctgc 143855
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctgagcgcgccgccgttcg 208 |||||||||||||||||||| Sbjct: 2036917 cctgagcgcgccgccgttcg 2036936
>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete sequence Length = 190939 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 catatcagaacctttgagat 634 |||||||||||||||||||| Sbjct: 125323 catatcagaacctttgagat 125304
>gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromosome 7, complete sequence Length = 190856 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 catatcagaacctttgagat 634 |||||||||||||||||||| Sbjct: 190245 catatcagaacctttgagat 190226
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccgctgtccgaggtttccgg 93 |||||||||||||||||||| Sbjct: 640270 ccgctgtccgaggtttccgg 640251
>ref|NM_005880.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 2 (DNAJA2), mRNA Length = 1993 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 305 ccatgccaccacctccgccgctgc 282
>gb|AY915332.1| Schistosoma japonicum SJCHGC04939 protein mRNA, partial cds Length = 1470 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 654 actagctcatttaaaatcag 673 |||||||||||||||||||| Sbjct: 128 actagctcatttaaaatcag 147
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 catgctggacgatgacgagg 433 |||||||||||||||||||| Sbjct: 677446 catgctggacgatgacgagg 677427
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cgcgtccctcgacgccgccgccgc 77 ||||||| |||||||||||||||| Sbjct: 9012391 cgcgtccatcgacgccgccgccgc 9012414
>gb|BC002961.1| Homo sapiens Wiskott-Aldrich syndrome (eczema-thrombocytopenia), mRNA (cDNA clone IMAGE:3542929), partial cds Length = 1835 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1210 cccatgccaccaccaccgcc 1229
>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence Length = 198781 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 152189 ttcactttgaatctatctgc 152170
>gb|AC022498.18| Homo sapiens 3 BAC RP11-430L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122437 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 60740 gccaccaccaccgccgctgc 60759
>emb|AJ001309.1|HSH4DNAJ Homo sapiens mRNA for DnaJ protein Length = 1862 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 305 ccatgccaccacctccgccgctgc 282
>emb|AJ010321.1|CAJ10321 Caulobacter crescentus partial tig gene and clpP, cicA, clpX, lon genes Length = 6710 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gacgtcgtcgtcaaggtcaa 257 |||||||||||||||||||| Sbjct: 298 gacgtcgtcgtcaaggtcaa 317
>gb|BT007895.1| Synthetic construct Homo sapiens adenosine kinase mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|BT006788.1| Homo sapiens adenosine kinase mRNA, complete cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|BC013044.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 2, mRNA (cDNA clone MGC:819 IMAGE:3505399), complete cds Length = 1590 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 347 ccatgccaccacctccgccgctgc 324
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcgacgccgccgccgctg 79 |||||||||||||||||||| Sbjct: 927911 cctcgacgccgccgccgctg 927892
>gb|AE005869.1| Caulobacter crescentus CB15 section 195 of 359 of the complete genome Length = 10960 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gacgtcgtcgtcaaggtcaa 257 |||||||||||||||||||| Sbjct: 10187 gacgtcgtcgtcaaggtcaa 10168
>emb|CR622758.1| full-length cDNA clone CS0DJ004YB06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1924 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 333 ccatgccaccacctccgccgctgc 310
>emb|CR621166.1| full-length cDNA clone CS0DN005YB14 of Adult brain of Homo sapiens (human) Length = 1825 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 432 ccatgccaccacctccgccgctgc 409
>emb|CR605854.1| full-length cDNA clone CS0DJ014YF16 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1780 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1202 cccatgccaccaccaccgcc 1221
>emb|CR605612.1| full-length cDNA clone CS0DH001YF09 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1805 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1220 cccatgccaccaccaccgcc 1239
>emb|CR597304.1| full-length cDNA clone CS0DC028YN22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 773 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 86 ttcactttgaatctatctgc 105
>emb|CR591854.1| full-length cDNA clone CS0DH001YF10 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1799 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1220 cccatgccaccaccaccgcc 1239
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gatgaggatggggatgttgt 413 |||||||||||||||||||| Sbjct: 1566038 gatgaggatggggatgttgt 1566019
>gb|AC022540.9| Homo sapiens chromosome 10 clone RP11-46O21, complete sequence Length = 71736 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 60792 ttcactttgaatctatctgc 60811
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 28733 gccaccaccaccgccgctgc 28714
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 120266 gccaccaccaccgccgctgc 120247
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cgcgtccctcgacgccgccgccgc 77 ||||||| |||||||||||||||| Sbjct: 137252 cgcgtccatcgacgccgccgccgc 137275
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cgcgtccctcgacgccgccgccgc 77 ||||||| |||||||||||||||| Sbjct: 19427 cgcgtccatcgacgccgccgccgc 19450
>gb|AY335649.1| Synthetic construct Homo sapiens adenosine kinase (ADK) mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AF116720.1|AF116720 Homo sapiens PRO3015 mRNA, complete cds Length = 1765 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 267 ccatgccaccacctccgccgctgc 290
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 2463534 gccaccaccaccgccgctgc 2463515
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 18131537 gccaccaccaccgccgctgc 18131556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cgcgtccctcgacgccgccgccgc 77 ||||||| |||||||||||||||| Sbjct: 9010226 cgcgtccatcgacgccgccgccgc 9010249
>gb|AC156355.4| Carollia perspicillata clone 201H7, complete sequence Length = 45928 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 662 atttaaaatcagcccttgat 681 |||||||||||||||||||| Sbjct: 39261 atttaaaatcagcccttgat 39280
>gb|AC007338.6| Homo sapiens chromosome 16 clone RP11-283C7, complete sequence Length = 185281 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 125243 ccatgccaccacctccgccgctgc 125220
>gb|AC018845.7| Homo sapiens chromosome 16 clone RP11-169E6, complete sequence Length = 176184 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ccatgccaccaccaccgccgctgc 32 ||||||||||||| |||||||||| Sbjct: 111510 ccatgccaccacctccgccgctgc 111533
>gb|AY892031.1| Synthetic construct Homo sapiens clone FLH110836.01L adenosine kinase (ADK) mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AY892030.1| Synthetic construct Homo sapiens clone FLH110835.01L adenosine kinase (ADK) mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AY889573.1| Synthetic construct Homo sapiens clone FLH110840.01X adenosine kinase (ADK) mRNA, complete cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AE005133.1| Halobacterium sp. NRC-1 section 164 of 170 of the complete genome Length = 12130 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccgccgccgctgtccgag 85 |||||||||||||||||||| Sbjct: 10128 cgccgccgccgctgtccgag 10109
>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence Length = 118313 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 catatcagaacctttgagat 634 |||||||||||||||||||| Sbjct: 36455 catatcagaacctttgagat 36436
>dbj|AK108185.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-B08, full insert sequence Length = 1136 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 cgcgtccctcgacgccgccgccgc 77 ||||||| |||||||||||||||| Sbjct: 616 cgcgtccatcgacgccgccgccgc 593
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccgccgccgctgtccgag 85 |||||||||||||||||||| Sbjct: 112871 cgccgccgccgctgtccgag 112852
>gb|AF115549.2|HSWASPG2 Homo sapiens Wiskott-Aldrich Syndrome protein (WASP) gene, 5' flanking region, complete cds, and 3' flanking region Length = 9484 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 6715 cccatgccaccaccaccgcc 6734
>gb|U72523.1|MMU72523 Mus musculus neural variant mena+++ protein (Mena) mRNA, complete cds Length = 2899 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 1492 gccaccaccaccgccgctgc 1511
>gb|U72522.1|MMU72522 Mus musculus neural variant mena++ protein (Mena) mRNA, complete cds Length = 2854 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 1447 gccaccaccaccgccgctgc 1466
>gb|U72521.1|MMU72521 Mus musculus neural variant mena+ protein (Mena) mRNA, complete cds Length = 2842 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 1435 gccaccaccaccgccgctgc 1454
>gb|U19927.1|HSU19927 Human Wiskott-Aldrich syndrome (WAS) mRNA, complete cds Length = 1796 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1198 cccatgccaccaccaccgcc 1217
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 2463485 gccaccaccaccgccgctgc 2463466
>gb|U90339.1|HSU90339 Human adenosine kinase short form mRNA, complete cds Length = 1172 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 670 ttcactttgaatctatctgc 689
>gb|U90338.1|HSU90338 Human adenosine kinase long form mRNA, complete cds Length = 1181 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 678 ttcactttgaatctatctgc 697
>gb|U33936.1|HSU33936 Human adenosine kinase mRNA, complete cds Length = 1096 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 635 ttcactttgaatctatctgc 654
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 662 atttaaaatcagcccttgat 681 |||||||||||||||||||| Sbjct: 708434 atttaaaatcagcccttgat 708453
>gb|U50196.1|HSU50196 Human adenosine kinase mRNA, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcactttgaatctatctgc 326 |||||||||||||||||||| Sbjct: 760 ttcactttgaatctatctgc 779
>gb|U12707.1|HSU12707 Human Wiskott-Aldrich syndrome protein (WASP) mRNA, complete cds Length = 1806 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatgccaccaccaccgcc 27 |||||||||||||||||||| Sbjct: 1208 cccatgccaccaccaccgcc 1227
>emb|X69722.1|MMIRS1 M.musculus mRNA for insulin receptor substrate 1 Length = 5246 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 3844 gccaccaccaccgccgctgc 3825
>dbj|D10727.1|MUSNDPP1 Mus musculus mRNA for NDPP-1 protein, complete cds Length = 4308 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccaccaccaccgccgctgc 32 |||||||||||||||||||| Sbjct: 974 gccaccaccaccgccgctgc 993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,475,255 Number of Sequences: 3902068 Number of extensions: 6475255 Number of successful extensions: 299131 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 297385 Number of HSP's gapped (non-prelim): 1738 length of query: 693 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 670 effective length of database: 17,143,297,704 effective search space: 11486009461680 effective search space used: 11486009461680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)