ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NAC19_ARATH (Q9C932) NAC domain-containing protein 19 (ANAC019) ... 131 9e-31
2NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) ... 130 1e-30
3NAC2_ARATH (Q39013) NAC domain-containing protein 2 (ANAC002) 129 3e-30
4NAC68_ORYSA (Q52QH4) NAC domain-containing protein 68 (ONAC068) 129 3e-30
5NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048) 129 3e-30
6NAC18_ARATH (Q9ZNU2) NAC domain-containing protein 18 (ANAC018) ... 128 6e-30
7NAC71_ORYSA (Q53NF7) NAC domain-containing protein 71 (ONAC071) 124 1e-28
8NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067) 123 2e-28
9NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (AN... 113 2e-25
10NAC94_ARATH (Q9FIW5) Putative NAC domain-containing protein 94 (... 111 9e-25
11NAC77_ORYSA (Q5CD17) NAC domain-containing protein 77 (ONAC077) ... 100 2e-21
12NAC22_ARATH (Q84TE6) NAC domain-containing protein 21/22 (ANAC02... 99 4e-21
13NAC43_ARATH (Q84WP6) NAC domain-containing protein 43 (ANAC043) ... 99 5e-21
14NAC42_ARATH (Q9SK55) Putative NAC domain-containing protein 42 (... 99 6e-21
15NAC66_ARATH (Q9M274) NAC domain-containing protein 66 (ANAC066) ... 96 4e-20
16NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076) 96 4e-20
17NAC78_ARATH (Q84K00) NAC domain-containing protein 78 (ANAC078) 94 1e-19
18NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074) 91 1e-18
19NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (... 80 3e-15
20NAC90_ARATH (Q9FMR3) NAC domain-containing protein 90 (ANAC090) 79 5e-15
21MURG_PROMA (Q7VDZ2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 29 6.0
22PSAD_CUCSA (P32869) Photosystem I reaction center subunit II, ch... 29 6.0
23MDTF_ECOLI (P37637) Multidrug resistance protein mdtF 28 7.9
24MDTF_ECOL6 (Q8FCI8) Multidrug resistance protein mdtF 28 7.9
25MDTF_ECO57 (Q8X3J5) Multidrug resistance protein mdtF 28 7.9
26RFX1_MOUSE (P48377) DNA-binding protein RFX1 28 7.9

>NAC19_ARATH (Q9C932) NAC domain-containing protein 19 (ANAC019) (ANAC)|
           (Abscicic-acid-responsive NAC)
          Length = 317

 Score =  131 bits (329), Expect = 9e-31
 Identities = 62/87 (71%), Positives = 71/87 (81%)
 Frame = -2

Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222
           L  +A++G+ EWYFFSPRDRKYPNG RPNR AGS YWKATGTDK I  +  GQ VG+KKA
Sbjct: 59  LPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKA 116

Query: 221 LVFYKGRLPKGTKTAWVMHEYRLAIDP 141
           LVFY G+ PKGTKT W+MHEYRL I+P
Sbjct: 117 LVFYIGKAPKGTKTNWIMHEYRL-IEP 142



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>NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2)|
           (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP)
          Length = 268

 Score =  130 bits (327), Expect = 1e-30
 Identities = 59/84 (70%), Positives = 69/84 (82%)
 Frame = -2

Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225
           +L  +  +G++EWYFFSPR+RKYPNG+RPNRAA S YWKATGTDK IH  ++   VGVKK
Sbjct: 53  QLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSS--NVGVKK 110

Query: 224 ALVFYKGRLPKGTKTAWVMHEYRL 153
           ALVFYKGR PKG KT W+MHEYRL
Sbjct: 111 ALVFYKGRPPKGIKTDWIMHEYRL 134



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>NAC2_ARATH (Q39013) NAC domain-containing protein 2 (ANAC002)|
          Length = 289

 Score =  129 bits (324), Expect = 3e-30
 Identities = 59/85 (69%), Positives = 67/85 (78%)
 Frame = -2

Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225
           +L   A+YG+ EWYFFSPRDRKYPNG RPNR+AGS YWKATG DKPI      + VG+KK
Sbjct: 51  ELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKK 107

Query: 224 ALVFYKGRLPKGTKTAWVMHEYRLA 150
           ALVFY G+ PKG KT W+MHEYRLA
Sbjct: 108 ALVFYAGKAPKGEKTNWIMHEYRLA 132



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>NAC68_ORYSA (Q52QH4) NAC domain-containing protein 68 (ONAC068)|
          Length = 318

 Score =  129 bits (324), Expect = 3e-30
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = -2

Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222
           L  +A++G  EWYFF+PRDRKYPNG RPNRAAG  YWKATG DKP+    + + VG+KKA
Sbjct: 66  LPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKA 125

Query: 221 LVFYKGRLPKGTKTAWVMHEYRLA 150
           LVFY G+ P+G KT W+MHEYRLA
Sbjct: 126 LVFYSGKAPRGVKTDWIMHEYRLA 149



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>NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)|
          Length = 303

 Score =  129 bits (324), Expect = 3e-30
 Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = -2

Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225
           +L   A+YG+ EWYFFSPRDRKYPNG RPNRAAGS YWKATG DKP+    + + V +KK
Sbjct: 53  QLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV---GSPKPVAIKK 109

Query: 224 ALVFYKGRLPKGTKTAWVMHEYRLA-IDPLAVVVNTYR 114
           ALVFY G+ PKG KT W+MHEYRLA +D  A   N+ R
Sbjct: 110 ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLR 147



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>NAC18_ARATH (Q9ZNU2) NAC domain-containing protein 18 (ANAC018) (NO APICAL|
           MERISTEM protein) (AtNAM)
          Length = 320

 Score =  128 bits (322), Expect = 6e-30
 Identities = 59/86 (68%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
 Frame = -2

Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATG--QGVGV 231
           +L A+A +G+ EWYFFSPRDRKYPNG RPNRAA S YWKATGTDKP+     G  + VGV
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query: 230 KKALVFYKGRLPKGTKTAWVMHEYRL 153
           KKALVFY G+ PKG K+ W+MHEYRL
Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEYRL 146



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>NAC71_ORYSA (Q53NF7) NAC domain-containing protein 71 (ONAC071)|
          Length = 329

 Score =  124 bits (310), Expect = 1e-28
 Identities = 56/84 (66%), Positives = 66/84 (78%)
 Frame = -2

Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222
           L  +A+ G+ EWYFFSPRDRKYPNG RPNRAAG+ YWKATG DKP+    + + V +KKA
Sbjct: 54  LPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPV---GSPRAVAIKKA 110

Query: 221 LVFYKGRLPKGTKTAWVMHEYRLA 150
           LVFY G+ PKG KT W+MHEYRLA
Sbjct: 111 LVFYAGKPPKGVKTNWIMHEYRLA 134



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>NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)|
          Length = 276

 Score =  123 bits (308), Expect = 2e-28
 Identities = 55/84 (65%), Positives = 65/84 (77%)
 Frame = -2

Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222
           L  +A++G  EWYFF+PRDRKYPNG RPNRAA S YWKATG DKP+     G+  G+KKA
Sbjct: 62  LPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPV--LHNGRTAGIKKA 119

Query: 221 LVFYKGRLPKGTKTAWVMHEYRLA 150
           LVFY G+ P+G KT W+MHEYRLA
Sbjct: 120 LVFYHGKPPRGVKTEWIMHEYRLA 143



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>NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (ANAC009)|
          Length = 418

 Score =  113 bits (282), Expect = 2e-25
 Identities = 47/79 (59%), Positives = 61/79 (77%)
 Frame = -2

Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFY 210
           A+ G+ EWYF+ PRDRKY N  RPNR  G+ +WKATGTD+PI+ +   + +G+KK+LVFY
Sbjct: 65  AMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFY 124

Query: 209 KGRLPKGTKTAWVMHEYRL 153
           KGR  KG KT W+MHE+RL
Sbjct: 125 KGRAAKGVKTDWMMHEFRL 143



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>NAC94_ARATH (Q9FIW5) Putative NAC domain-containing protein 94 (ANAC094)|
          Length = 337

 Score =  111 bits (277), Expect = 9e-25
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = -2

Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFY 210
           A  G+ EWYF+ PRDRKY N  RPNR  G  +WKATGTD+PI+   + + +G+KK+LVFY
Sbjct: 69  AAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFY 128

Query: 209 KGRLPKGTKTAWVMHEYRL 153
           +GR  KG KT W+MHE+RL
Sbjct: 129 RGRAAKGVKTDWMMHEFRL 147



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>NAC77_ORYSA (Q5CD17) NAC domain-containing protein 77 (ONAC077) (ONAC300)|
          Length = 396

 Score =  100 bits (248), Expect = 2e-21
 Identities = 52/97 (53%), Positives = 60/97 (61%), Gaps = 14/97 (14%)
 Frame = -2

Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPI--HDAATG------ 246
           L ++A  G+ EWYFFS +D KYP G+R NRA    YWKATG D+ I    AA        
Sbjct: 64  LPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGG 123

Query: 245 ------QGVGVKKALVFYKGRLPKGTKTAWVMHEYRL 153
                 Q VG+KK LVFY GR PKGTKT WVMHE+RL
Sbjct: 124 SSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 160



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>NAC22_ARATH (Q84TE6) NAC domain-containing protein 21/22 (ANAC021) (ANAC022)|
          Length = 324

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 45/79 (56%), Positives = 56/79 (70%)
 Frame = -2

Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFY 210
           A  G  +WYF+S RDRKY  G+R NRA  + YWKATG D+ I     G+ VG++K LVFY
Sbjct: 69  ACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTI--LRKGKLVGMRKTLVFY 126

Query: 209 KGRLPKGTKTAWVMHEYRL 153
           +GR P+G KT WVMHE+RL
Sbjct: 127 QGRAPRGRKTDWVMHEFRL 145



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>NAC43_ARATH (Q84WP6) NAC domain-containing protein 43 (ANAC043) (NAC SECONDARY|
           WALL THICKENING PROMOTING FACTOR 1) (Protein EMBRYO
           DEFECTIVE 2301)
          Length = 365

 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 42/74 (56%), Positives = 56/74 (75%)
 Frame = -2

Query: 374 SEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195
           ++WYFFS +D+KYP G R NRA  + +WKATG DK I+  + G+ +G++K LVFYKGR P
Sbjct: 73  NDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIY--SNGRRIGMRKTLVFYKGRAP 130

Query: 194 KGTKTAWVMHEYRL 153
            G K+ W+MHEYRL
Sbjct: 131 HGQKSDWIMHEYRL 144



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>NAC42_ARATH (Q9SK55) Putative NAC domain-containing protein 42 (ANAC042)|
          Length = 275

 Score = 98.6 bits (244), Expect = 6e-21
 Identities = 44/76 (57%), Positives = 55/76 (72%)
 Frame = -2

Query: 380 GDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGR 201
           G+ EWYFF  R RKY N +RPNR  GS +WKATG DKP++  +    VG+KK+LV+Y G 
Sbjct: 70  GEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVY--SNLDCVGLKKSLVYYLGS 127

Query: 200 LPKGTKTAWVMHEYRL 153
             KGTKT W+MHE+RL
Sbjct: 128 AGKGTKTDWMMHEFRL 143



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>NAC66_ARATH (Q9M274) NAC domain-containing protein 66 (ANAC066) (NAC SECONDARY|
           WALL THICKENING PROMOTING FACTOR 2)
          Length = 334

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = -2

Query: 374 SEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195
           ++WYF+S +D+KYP G R NRA    +WKATG DK I+    G  +G++K LVFYKGR P
Sbjct: 68  NDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIY--TNGDRIGMRKTLVFYKGRAP 125

Query: 194 KGTKTAWVMHEYRL 153
            G K+ W+MHEYRL
Sbjct: 126 HGQKSDWIMHEYRL 139



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>NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076)|
          Length = 276

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 45/81 (55%), Positives = 55/81 (67%)
 Frame = -2

Query: 374 SEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195
           +EWYFFS +D+KYP G R NRA  + +WKATG DK I   A    +G++K LVFY GR P
Sbjct: 67  NEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIF-LANACRIGMRKTLVFYVGRAP 125

Query: 194 KGTKTAWVMHEYRLAIDPLAV 132
            G KT W+MHEYRL  D + V
Sbjct: 126 HGKKTDWIMHEYRLDQDNVDV 146



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>NAC78_ARATH (Q84K00) NAC domain-containing protein 78 (ANAC078)|
          Length = 567

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = -2

Query: 377 DSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRL 198
           D EWYFFS  D+KY NG + NRA    YWK TG D+ I + +  + VG+KK LV++KGR 
Sbjct: 64  DLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGS--RVVGMKKTLVYHKGRA 121

Query: 197 PKGTKTAWVMHEYRLAIDPL 138
           P+G +T WVMHEYRL+ + L
Sbjct: 122 PRGERTNWVMHEYRLSDEDL 141



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>NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074)|
          Length = 489

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 40/73 (54%), Positives = 52/73 (71%)
 Frame = -2

Query: 377 DSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRL 198
           D++W+FF+ RDRKYPNG R NRA  + YWK+TG D+ I      Q +G KK LVF++GR 
Sbjct: 64  DNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGK--QTIGTKKTLVFHEGRP 121

Query: 197 PKGTKTAWVMHEY 159
           P G +T W+MHEY
Sbjct: 122 PTGRRTEWIMHEY 134



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>NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (ANAC061)|
          Length = 228

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -2

Query: 401 LQAQAVYGDSE-WYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225
           L  +   GD+E W FF PR  +   G RP+R  GS YWKATG+  P+  +   + +GVKK
Sbjct: 54  LAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVF-SPDNRVIGVKK 112

Query: 224 ALVFYKGRLPKGTKTAWVMHEYR 156
            +VFY G+ P G KT W M+EY+
Sbjct: 113 TMVFYTGKAPTGRKTKWKMNEYK 135



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>NAC90_ARATH (Q9FMR3) NAC domain-containing protein 90 (ANAC090)|
          Length = 235

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 380 GDSE-WYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKG 204
           GD+E W+FF PR  +   G RP+R  GS YWKATG+  P+  +   + +G KK +VFY G
Sbjct: 62  GDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVF-SKDNKMIGAKKTMVFYTG 120

Query: 203 RLPKGTKTAWVMHEYRLAID 144
           + P G KT W M+EY  A+D
Sbjct: 121 KAPTGRKTKWKMNEYH-AVD 139



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>MURG_PROMA (Q7VDZ2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 357

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 235 PTPWPVAASWMGLSVPVAFQ*LEPAARLGRMPLGYLRSRGLKKYHSL 375
           P  W +  SW+G+   +  Q +     +  +P+G L+S+GL+KY  L
Sbjct: 26  PESWDI--SWLGVPERLENQLVPTKYDMTVIPVGGLQSKGLRKYFQL 70



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>PSAD_CUCSA (P32869) Photosystem I reaction center subunit II, chloroplast|
           precursor (Photosystem I 20 kDa subunit) (PSI-D) (PS I
           subunit 5)
          Length = 207

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 407 MKLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTD-KPIHDAATGQGV 237
           +K Q   V+ + E  +  P+D  YP  + P R      +++ G +  PI    TG+ V
Sbjct: 147 IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQV 204



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>MDTF_ECOLI (P37637) Multidrug resistance protein mdtF|
          Length = 1037

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = -2

Query: 389  AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVG-VKKALVF 213
            + Y  +EW + SPR  +Y NGI      G              +AA G+  G   K +  
Sbjct: 800  SAYSSTEWTYGSPRLERY-NGIPSMEILG--------------EAAAGKSTGDAMKFMAD 844

Query: 212  YKGRLPKGTKTAWVMHEYRLAI 147
               +LP G   +W    Y+ A+
Sbjct: 845  LVAKLPAGVGYSWTGLSYQEAL 866



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>MDTF_ECOL6 (Q8FCI8) Multidrug resistance protein mdtF|
          Length = 1037

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = -2

Query: 389  AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVG-VKKALVF 213
            + Y  +EW + SPR  +Y NGI      G              +AA G+  G   K +  
Sbjct: 800  SAYSSTEWTYGSPRLERY-NGIPSMEILG--------------EAAAGKSTGDAMKFMAD 844

Query: 212  YKGRLPKGTKTAWVMHEYRLAI 147
               +LP G   +W    Y+ A+
Sbjct: 845  LVAKLPAGVGYSWTGLSYQEAL 866



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>MDTF_ECO57 (Q8X3J5) Multidrug resistance protein mdtF|
          Length = 1037

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = -2

Query: 389  AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVG-VKKALVF 213
            + Y  +EW + SPR  +Y NGI      G              +AA G+  G   K +  
Sbjct: 800  SAYSSTEWTYGSPRLERY-NGIPSMEILG--------------EAAAGKSTGDAMKFMAD 844

Query: 212  YKGRLPKGTKTAWVMHEYRLAI 147
               +LP G   +W    Y+ A+
Sbjct: 845  LVAKLPAGVGYSWTGLSYQEAL 866



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>RFX1_MOUSE (P48377) DNA-binding protein RFX1|
          Length = 963

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 341 KYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195
           +YP      + AG+SY++A+GT   +   AT Q V    ++  Y    P
Sbjct: 307 QYPETPIYTQTAGTSYYEASGTAAQVSTPATSQTVASSGSVPMYVSGSP 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,118,765
Number of Sequences: 219361
Number of extensions: 879145
Number of successful extensions: 2601
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2584
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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