ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2n18 |
|---|---|
| Clone Library Name | barley_pub |
>NAC19_ARATH (Q9C932) NAC domain-containing protein 19 (ANAC019) (ANAC)| (Abscicic-acid-responsive NAC) Length = 317 Score = 131 bits (329), Expect = 9e-31 Identities = 62/87 (71%), Positives = 71/87 (81%) Frame = -2 Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222 L +A++G+ EWYFFSPRDRKYPNG RPNR AGS YWKATGTDK I + GQ VG+KKA Sbjct: 59 LPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKA 116 Query: 221 LVFYKGRLPKGTKTAWVMHEYRLAIDP 141 LVFY G+ PKGTKT W+MHEYRL I+P Sbjct: 117 LVFYIGKAPKGTKTNWIMHEYRL-IEP 142
>NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2)| (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP) Length = 268 Score = 130 bits (327), Expect = 1e-30 Identities = 59/84 (70%), Positives = 69/84 (82%) Frame = -2 Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225 +L + +G++EWYFFSPR+RKYPNG+RPNRAA S YWKATGTDK IH ++ VGVKK Sbjct: 53 QLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSS--NVGVKK 110 Query: 224 ALVFYKGRLPKGTKTAWVMHEYRL 153 ALVFYKGR PKG KT W+MHEYRL Sbjct: 111 ALVFYKGRPPKGIKTDWIMHEYRL 134
>NAC2_ARATH (Q39013) NAC domain-containing protein 2 (ANAC002)| Length = 289 Score = 129 bits (324), Expect = 3e-30 Identities = 59/85 (69%), Positives = 67/85 (78%) Frame = -2 Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225 +L A+YG+ EWYFFSPRDRKYPNG RPNR+AGS YWKATG DKPI + VG+KK Sbjct: 51 ELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKK 107 Query: 224 ALVFYKGRLPKGTKTAWVMHEYRLA 150 ALVFY G+ PKG KT W+MHEYRLA Sbjct: 108 ALVFYAGKAPKGEKTNWIMHEYRLA 132
>NAC68_ORYSA (Q52QH4) NAC domain-containing protein 68 (ONAC068)| Length = 318 Score = 129 bits (324), Expect = 3e-30 Identities = 55/84 (65%), Positives = 66/84 (78%) Frame = -2 Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222 L +A++G EWYFF+PRDRKYPNG RPNRAAG YWKATG DKP+ + + VG+KKA Sbjct: 66 LPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKA 125 Query: 221 LVFYKGRLPKGTKTAWVMHEYRLA 150 LVFY G+ P+G KT W+MHEYRLA Sbjct: 126 LVFYSGKAPRGVKTDWIMHEYRLA 149
>NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)| Length = 303 Score = 129 bits (324), Expect = 3e-30 Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 1/98 (1%) Frame = -2 Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225 +L A+YG+ EWYFFSPRDRKYPNG RPNRAAGS YWKATG DKP+ + + V +KK Sbjct: 53 QLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV---GSPKPVAIKK 109 Query: 224 ALVFYKGRLPKGTKTAWVMHEYRLA-IDPLAVVVNTYR 114 ALVFY G+ PKG KT W+MHEYRLA +D A N+ R Sbjct: 110 ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLR 147
>NAC18_ARATH (Q9ZNU2) NAC domain-containing protein 18 (ANAC018) (NO APICAL| MERISTEM protein) (AtNAM) Length = 320 Score = 128 bits (322), Expect = 6e-30 Identities = 59/86 (68%), Positives = 68/86 (79%), Gaps = 2/86 (2%) Frame = -2 Query: 404 KLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATG--QGVGV 231 +L A+A +G+ EWYFFSPRDRKYPNG RPNRAA S YWKATGTDKP+ G + VGV Sbjct: 61 ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120 Query: 230 KKALVFYKGRLPKGTKTAWVMHEYRL 153 KKALVFY G+ PKG K+ W+MHEYRL Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEYRL 146
>NAC71_ORYSA (Q53NF7) NAC domain-containing protein 71 (ONAC071)| Length = 329 Score = 124 bits (310), Expect = 1e-28 Identities = 56/84 (66%), Positives = 66/84 (78%) Frame = -2 Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222 L +A+ G+ EWYFFSPRDRKYPNG RPNRAAG+ YWKATG DKP+ + + V +KKA Sbjct: 54 LPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPV---GSPRAVAIKKA 110 Query: 221 LVFYKGRLPKGTKTAWVMHEYRLA 150 LVFY G+ PKG KT W+MHEYRLA Sbjct: 111 LVFYAGKPPKGVKTNWIMHEYRLA 134
>NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)| Length = 276 Score = 123 bits (308), Expect = 2e-28 Identities = 55/84 (65%), Positives = 65/84 (77%) Frame = -2 Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKA 222 L +A++G EWYFF+PRDRKYPNG RPNRAA S YWKATG DKP+ G+ G+KKA Sbjct: 62 LPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPV--LHNGRTAGIKKA 119 Query: 221 LVFYKGRLPKGTKTAWVMHEYRLA 150 LVFY G+ P+G KT W+MHEYRLA Sbjct: 120 LVFYHGKPPRGVKTEWIMHEYRLA 143
>NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (ANAC009)| Length = 418 Score = 113 bits (282), Expect = 2e-25 Identities = 47/79 (59%), Positives = 61/79 (77%) Frame = -2 Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFY 210 A+ G+ EWYF+ PRDRKY N RPNR G+ +WKATGTD+PI+ + + +G+KK+LVFY Sbjct: 65 AMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFY 124 Query: 209 KGRLPKGTKTAWVMHEYRL 153 KGR KG KT W+MHE+RL Sbjct: 125 KGRAAKGVKTDWMMHEFRL 143
>NAC94_ARATH (Q9FIW5) Putative NAC domain-containing protein 94 (ANAC094)| Length = 337 Score = 111 bits (277), Expect = 9e-25 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -2 Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFY 210 A G+ EWYF+ PRDRKY N RPNR G +WKATGTD+PI+ + + +G+KK+LVFY Sbjct: 69 AAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFY 128 Query: 209 KGRLPKGTKTAWVMHEYRL 153 +GR KG KT W+MHE+RL Sbjct: 129 RGRAAKGVKTDWMMHEFRL 147
>NAC77_ORYSA (Q5CD17) NAC domain-containing protein 77 (ONAC077) (ONAC300)| Length = 396 Score = 100 bits (248), Expect = 2e-21 Identities = 52/97 (53%), Positives = 60/97 (61%), Gaps = 14/97 (14%) Frame = -2 Query: 401 LQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPI--HDAATG------ 246 L ++A G+ EWYFFS +D KYP G+R NRA YWKATG D+ I AA Sbjct: 64 LPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGG 123 Query: 245 ------QGVGVKKALVFYKGRLPKGTKTAWVMHEYRL 153 Q VG+KK LVFY GR PKGTKT WVMHE+RL Sbjct: 124 SSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 160
>NAC22_ARATH (Q84TE6) NAC domain-containing protein 21/22 (ANAC021) (ANAC022)| Length = 324 Score = 99.4 bits (246), Expect = 4e-21 Identities = 45/79 (56%), Positives = 56/79 (70%) Frame = -2 Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFY 210 A G +WYF+S RDRKY G+R NRA + YWKATG D+ I G+ VG++K LVFY Sbjct: 69 ACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTI--LRKGKLVGMRKTLVFY 126 Query: 209 KGRLPKGTKTAWVMHEYRL 153 +GR P+G KT WVMHE+RL Sbjct: 127 QGRAPRGRKTDWVMHEFRL 145
>NAC43_ARATH (Q84WP6) NAC domain-containing protein 43 (ANAC043) (NAC SECONDARY| WALL THICKENING PROMOTING FACTOR 1) (Protein EMBRYO DEFECTIVE 2301) Length = 365 Score = 99.0 bits (245), Expect = 5e-21 Identities = 42/74 (56%), Positives = 56/74 (75%) Frame = -2 Query: 374 SEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195 ++WYFFS +D+KYP G R NRA + +WKATG DK I+ + G+ +G++K LVFYKGR P Sbjct: 73 NDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIY--SNGRRIGMRKTLVFYKGRAP 130 Query: 194 KGTKTAWVMHEYRL 153 G K+ W+MHEYRL Sbjct: 131 HGQKSDWIMHEYRL 144
>NAC42_ARATH (Q9SK55) Putative NAC domain-containing protein 42 (ANAC042)| Length = 275 Score = 98.6 bits (244), Expect = 6e-21 Identities = 44/76 (57%), Positives = 55/76 (72%) Frame = -2 Query: 380 GDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGR 201 G+ EWYFF R RKY N +RPNR GS +WKATG DKP++ + VG+KK+LV+Y G Sbjct: 70 GEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVY--SNLDCVGLKKSLVYYLGS 127 Query: 200 LPKGTKTAWVMHEYRL 153 KGTKT W+MHE+RL Sbjct: 128 AGKGTKTDWMMHEFRL 143
>NAC66_ARATH (Q9M274) NAC domain-containing protein 66 (ANAC066) (NAC SECONDARY| WALL THICKENING PROMOTING FACTOR 2) Length = 334 Score = 95.9 bits (237), Expect = 4e-20 Identities = 41/74 (55%), Positives = 53/74 (71%) Frame = -2 Query: 374 SEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195 ++WYF+S +D+KYP G R NRA +WKATG DK I+ G +G++K LVFYKGR P Sbjct: 68 NDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIY--TNGDRIGMRKTLVFYKGRAP 125 Query: 194 KGTKTAWVMHEYRL 153 G K+ W+MHEYRL Sbjct: 126 HGQKSDWIMHEYRL 139
>NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076)| Length = 276 Score = 95.9 bits (237), Expect = 4e-20 Identities = 45/81 (55%), Positives = 55/81 (67%) Frame = -2 Query: 374 SEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195 +EWYFFS +D+KYP G R NRA + +WKATG DK I A +G++K LVFY GR P Sbjct: 67 NEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIF-LANACRIGMRKTLVFYVGRAP 125 Query: 194 KGTKTAWVMHEYRLAIDPLAV 132 G KT W+MHEYRL D + V Sbjct: 126 HGKKTDWIMHEYRLDQDNVDV 146
>NAC78_ARATH (Q84K00) NAC domain-containing protein 78 (ANAC078)| Length = 567 Score = 94.4 bits (233), Expect = 1e-19 Identities = 43/80 (53%), Positives = 56/80 (70%) Frame = -2 Query: 377 DSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRL 198 D EWYFFS D+KY NG + NRA YWK TG D+ I + + + VG+KK LV++KGR Sbjct: 64 DLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGS--RVVGMKKTLVYHKGRA 121 Query: 197 PKGTKTAWVMHEYRLAIDPL 138 P+G +T WVMHEYRL+ + L Sbjct: 122 PRGERTNWVMHEYRLSDEDL 141
>NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074)| Length = 489 Score = 91.3 bits (225), Expect = 1e-18 Identities = 40/73 (54%), Positives = 52/73 (71%) Frame = -2 Query: 377 DSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRL 198 D++W+FF+ RDRKYPNG R NRA + YWK+TG D+ I Q +G KK LVF++GR Sbjct: 64 DNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGK--QTIGTKKTLVFHEGRP 121 Query: 197 PKGTKTAWVMHEY 159 P G +T W+MHEY Sbjct: 122 PTGRRTEWIMHEY 134
>NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (ANAC061)| Length = 228 Score = 79.7 bits (195), Expect = 3e-15 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = -2 Query: 401 LQAQAVYGDSE-WYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKK 225 L + GD+E W FF PR + G RP+R GS YWKATG+ P+ + + +GVKK Sbjct: 54 LAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVF-SPDNRVIGVKK 112 Query: 224 ALVFYKGRLPKGTKTAWVMHEYR 156 +VFY G+ P G KT W M+EY+ Sbjct: 113 TMVFYTGKAPTGRKTKWKMNEYK 135
>NAC90_ARATH (Q9FMR3) NAC domain-containing protein 90 (ANAC090)| Length = 235 Score = 79.0 bits (193), Expect = 5e-15 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = -2 Query: 380 GDSE-WYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKG 204 GD+E W+FF PR + G RP+R GS YWKATG+ P+ + + +G KK +VFY G Sbjct: 62 GDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVF-SKDNKMIGAKKTMVFYTG 120 Query: 203 RLPKGTKTAWVMHEYRLAID 144 + P G KT W M+EY A+D Sbjct: 121 KAPTGRKTKWKMNEYH-AVD 139
>MURG_PROMA (Q7VDZ2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 357 Score = 28.9 bits (63), Expect = 6.0 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 235 PTPWPVAASWMGLSVPVAFQ*LEPAARLGRMPLGYLRSRGLKKYHSL 375 P W + SW+G+ + Q + + +P+G L+S+GL+KY L Sbjct: 26 PESWDI--SWLGVPERLENQLVPTKYDMTVIPVGGLQSKGLRKYFQL 70
>PSAD_CUCSA (P32869) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) (PS I subunit 5) Length = 207 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -2 Query: 407 MKLQAQAVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTD-KPIHDAATGQGV 237 +K Q V+ + E + P+D YP + P R +++ G + PI TG+ V Sbjct: 147 IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQV 204
>MDTF_ECOLI (P37637) Multidrug resistance protein mdtF| Length = 1037 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Frame = -2 Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVG-VKKALVF 213 + Y +EW + SPR +Y NGI G +AA G+ G K + Sbjct: 800 SAYSSTEWTYGSPRLERY-NGIPSMEILG--------------EAAAGKSTGDAMKFMAD 844 Query: 212 YKGRLPKGTKTAWVMHEYRLAI 147 +LP G +W Y+ A+ Sbjct: 845 LVAKLPAGVGYSWTGLSYQEAL 866
>MDTF_ECOL6 (Q8FCI8) Multidrug resistance protein mdtF| Length = 1037 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Frame = -2 Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVG-VKKALVF 213 + Y +EW + SPR +Y NGI G +AA G+ G K + Sbjct: 800 SAYSSTEWTYGSPRLERY-NGIPSMEILG--------------EAAAGKSTGDAMKFMAD 844 Query: 212 YKGRLPKGTKTAWVMHEYRLAI 147 +LP G +W Y+ A+ Sbjct: 845 LVAKLPAGVGYSWTGLSYQEAL 866
>MDTF_ECO57 (Q8X3J5) Multidrug resistance protein mdtF| Length = 1037 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Frame = -2 Query: 389 AVYGDSEWYFFSPRDRKYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVG-VKKALVF 213 + Y +EW + SPR +Y NGI G +AA G+ G K + Sbjct: 800 SAYSSTEWTYGSPRLERY-NGIPSMEILG--------------EAAAGKSTGDAMKFMAD 844 Query: 212 YKGRLPKGTKTAWVMHEYRLAI 147 +LP G +W Y+ A+ Sbjct: 845 LVAKLPAGVGYSWTGLSYQEAL 866
>RFX1_MOUSE (P48377) DNA-binding protein RFX1| Length = 963 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -2 Query: 341 KYPNGIRPNRAAGSSYWKATGTDKPIHDAATGQGVGVKKALVFYKGRLP 195 +YP + AG+SY++A+GT + AT Q V ++ Y P Sbjct: 307 QYPETPIYTQTAGTSYYEASGTAAQVSTPATSQTVASSGSVPMYVSGSP 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,118,765 Number of Sequences: 219361 Number of extensions: 879145 Number of successful extensions: 2601 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2533 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2584 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
