ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2n05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3311 Score = 367 bits (185), Expect = 3e-98 Identities = 326/373 (87%) Strand = Plus / Plus Query: 285 ttctgaagaatatgaaaaatatggtgtggagcttctgaaatctgaagcttcgctgcagta 344 |||||| ||||| ||| || ||||||| || ||| ||||||||||||| |||||| |||| Sbjct: 2437 ttctgatgaatacgaagaacatggtgtagatcttttgaaatctgaagcgtcgctggagta 2496 Query: 345 tttatgcaacctaccacctcataggtatgaagctgcctatgcgagagatatccctgagct 404 |||||||||||||||||||||||| |||||||||| || ||||||||||| || ||| | Sbjct: 2497 tttatgcaacctaccacctcatagatatgaagctgtttacgcgagagatattccagagat 2556 Query: 405 cattactggggatgagtttatgaagaaatatggagatcacaacgatgcagtaacagttgt 464 ||| || ||||||| ||| || |||| ||||||||||| || |||||||||||| ||| Sbjct: 2557 cataaccggggatgcatttttggagaagtatggagatcataatgatgcagtaacaactgt 2616 Query: 465 tgacccaaaaagatcttacagtgtgaaggcccccactagacatcccatctacgagaactt 524 |||||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 2617 tgacccaaaacgatcttactgtgtgaaggctcctactagacatcctatatacgagaactt 2676 Query: 525 ccgcgttgaggccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagc 584 ||| ||||||||||||||||||||| |||||||||||||||||| |||||||| || || Sbjct: 2677 ccgagttgaggccttcaaagcattgctaacagcagccaaaacagttgagcaactttcggc 2736 Query: 585 gcttggagaacttatgtatcagtgccattacagctataatgcttgcgggcttggttctga 644 ||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 2737 ccttggagaattgatgtatcagtgccactacagctacaatgcttgtgggcttggttctga 2796 Query: 645 tgggactgacagg 657 ||| || |||||| Sbjct: 2797 tggaaccgacagg 2809 Score = 323 bits (163), Expect = 4e-85 Identities = 220/239 (92%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2147 gttggagcaccttgtggtgtaatggatcaaatgacatctgcttgtggagaagctaacaaa 2206 Query: 61 cttcttgcaatggtttgccagcctgcagaagtgaaagaattggttagcattccaacccac 120 |||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 2207 cttcttgcaatgatttgtcagcctgcagaagtgaaagagttggtcagcattccaactcac 2266 Query: 121 atacgattttggggtctcgactctgggatacggcatagtgttggtgggactgattacgga 180 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 2267 attcgattttggggtcttgactctgggatacgacatagtgttggtgggactgattatggc 2326 Query: 181 tctgtgagggtaggcacatatatgggacgcaagatgattaagtgtgctgcatctgatct 239 ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 2327 tctgtaagggtaggcacttacatgggacgcaagatgatcaagtgtgctgcatctgatct 2385
>ref|XM_506716.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1123_E07.2 mRNA Length = 3765 Score = 367 bits (185), Expect = 3e-98 Identities = 326/373 (87%) Strand = Plus / Plus Query: 285 ttctgaagaatatgaaaaatatggtgtggagcttctgaaatctgaagcttcgctgcagta 344 |||||| ||||| ||| || ||||||| || ||| ||||||||||||| |||||| |||| Sbjct: 2432 ttctgatgaatacgaagaacatggtgtagatcttttgaaatctgaagcgtcgctggagta 2491 Query: 345 tttatgcaacctaccacctcataggtatgaagctgcctatgcgagagatatccctgagct 404 |||||||||||||||||||||||| |||||||||| || ||||||||||| || ||| | Sbjct: 2492 tttatgcaacctaccacctcatagatatgaagctgtttacgcgagagatattccagagat 2551 Query: 405 cattactggggatgagtttatgaagaaatatggagatcacaacgatgcagtaacagttgt 464 ||| || ||||||| ||| || |||| ||||||||||| || |||||||||||| ||| Sbjct: 2552 cataaccggggatgcatttttggagaagtatggagatcataatgatgcagtaacaactgt 2611 Query: 465 tgacccaaaaagatcttacagtgtgaaggcccccactagacatcccatctacgagaactt 524 |||||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 2612 tgacccaaaacgatcttactgtgtgaaggctcctactagacatcctatatacgagaactt 2671 Query: 525 ccgcgttgaggccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagc 584 ||| ||||||||||||||||||||| |||||||||||||||||| |||||||| || || Sbjct: 2672 ccgagttgaggccttcaaagcattgctaacagcagccaaaacagttgagcaactttcggc 2731 Query: 585 gcttggagaacttatgtatcagtgccattacagctataatgcttgcgggcttggttctga 644 ||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 2732 ccttggagaattgatgtatcagtgccactacagctacaatgcttgtgggcttggttctga 2791 Query: 645 tgggactgacagg 657 ||| || |||||| Sbjct: 2792 tggaaccgacagg 2804 Score = 323 bits (163), Expect = 4e-85 Identities = 220/239 (92%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2142 gttggagcaccttgtggtgtaatggatcaaatgacatctgcttgtggagaagctaacaaa 2201 Query: 61 cttcttgcaatggtttgccagcctgcagaagtgaaagaattggttagcattccaacccac 120 |||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 2202 cttcttgcaatgatttgtcagcctgcagaagtgaaagagttggtcagcattccaactcac 2261 Query: 121 atacgattttggggtctcgactctgggatacggcatagtgttggtgggactgattacgga 180 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 2262 attcgattttggggtcttgactctgggatacgacatagtgttggtgggactgattatggc 2321 Query: 181 tctgtgagggtaggcacatatatgggacgcaagatgattaagtgtgctgcatctgatct 239 ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 2322 tctgtaagggtaggcacttacatgggacgcaagatgatcaagtgtgctgcatctgatct 2380
>dbj|AK074020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075P06, full insert sequence Length = 3312 Score = 367 bits (185), Expect = 3e-98 Identities = 326/373 (87%) Strand = Plus / Plus Query: 285 ttctgaagaatatgaaaaatatggtgtggagcttctgaaatctgaagcttcgctgcagta 344 |||||| ||||| ||| || ||||||| || ||| ||||||||||||| |||||| |||| Sbjct: 2438 ttctgatgaatacgaagaacatggtgtagatcttttgaaatctgaagcgtcgctggagta 2497 Query: 345 tttatgcaacctaccacctcataggtatgaagctgcctatgcgagagatatccctgagct 404 |||||||||||||||||||||||| |||||||||| || ||||||||||| || ||| | Sbjct: 2498 tttatgcaacctaccacctcatagatatgaagctgtttacgcgagagatattccagagat 2557 Query: 405 cattactggggatgagtttatgaagaaatatggagatcacaacgatgcagtaacagttgt 464 ||| || ||||||| ||| || |||| ||||||||||| || |||||||||||| ||| Sbjct: 2558 cataaccggggatgcatttttggagaagtatggagatcataatgatgcagtaacaactgt 2617 Query: 465 tgacccaaaaagatcttacagtgtgaaggcccccactagacatcccatctacgagaactt 524 |||||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 2618 tgacccaaaacgatcttactgtgtgaaggctcctactagacatcctatatacgagaactt 2677 Query: 525 ccgcgttgaggccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagc 584 ||| ||||||||||||||||||||| |||||||||||||||||| |||||||| || || Sbjct: 2678 ccgagttgaggccttcaaagcattgctaacagcagccaaaacagttgagcaactttcggc 2737 Query: 585 gcttggagaacttatgtatcagtgccattacagctataatgcttgcgggcttggttctga 644 ||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 2738 ccttggagaattgatgtatcagtgccactacagctacaatgcttgtgggcttggttctga 2797 Query: 645 tgggactgacagg 657 ||| || |||||| Sbjct: 2798 tggaaccgacagg 2810 Score = 323 bits (163), Expect = 4e-85 Identities = 220/239 (92%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2148 gttggagcaccttgtggtgtaatggatcaaatgacatctgcttgtggagaagctaacaaa 2207 Query: 61 cttcttgcaatggtttgccagcctgcagaagtgaaagaattggttagcattccaacccac 120 |||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 2208 cttcttgcaatgatttgtcagcctgcagaagtgaaagagttggtcagcattccaactcac 2267 Query: 121 atacgattttggggtctcgactctgggatacggcatagtgttggtgggactgattacgga 180 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 2268 attcgattttggggtcttgactctgggatacgacatagtgttggtgggactgattatggc 2327 Query: 181 tctgtgagggtaggcacatatatgggacgcaagatgattaagtgtgctgcatctgatct 239 ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 2328 tctgtaagggtaggcacttacatgggacgcaagatgatcaagtgtgctgcatctgatct 2386
>dbj|AK067279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097O08, full insert sequence Length = 3764 Score = 367 bits (185), Expect = 3e-98 Identities = 326/373 (87%) Strand = Plus / Plus Query: 285 ttctgaagaatatgaaaaatatggtgtggagcttctgaaatctgaagcttcgctgcagta 344 |||||| ||||| ||| || ||||||| || ||| ||||||||||||| |||||| |||| Sbjct: 2431 ttctgatgaatacgaagaacatggtgtagatcttttgaaatctgaagcgtcgctggagta 2490 Query: 345 tttatgcaacctaccacctcataggtatgaagctgcctatgcgagagatatccctgagct 404 |||||||||||||||||||||||| |||||||||| || ||||||||||| || ||| | Sbjct: 2491 tttatgcaacctaccacctcatagatatgaagctgtttacgcgagagatattccagagat 2550 Query: 405 cattactggggatgagtttatgaagaaatatggagatcacaacgatgcagtaacagttgt 464 ||| || ||||||| ||| || |||| ||||||||||| || |||||||||||| ||| Sbjct: 2551 cataaccggggatgcatttttggagaagtatggagatcataatgatgcagtaacaactgt 2610 Query: 465 tgacccaaaaagatcttacagtgtgaaggcccccactagacatcccatctacgagaactt 524 |||||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 2611 tgacccaaaacgatcttactgtgtgaaggctcctactagacatcctatatacgagaactt 2670 Query: 525 ccgcgttgaggccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagc 584 ||| ||||||||||||||||||||| |||||||||||||||||| |||||||| || || Sbjct: 2671 ccgagttgaggccttcaaagcattgctaacagcagccaaaacagttgagcaactttcggc 2730 Query: 585 gcttggagaacttatgtatcagtgccattacagctataatgcttgcgggcttggttctga 644 ||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 2731 ccttggagaattgatgtatcagtgccactacagctacaatgcttgtgggcttggttctga 2790 Query: 645 tgggactgacagg 657 ||| || |||||| Sbjct: 2791 tggaaccgacagg 2803 Score = 323 bits (163), Expect = 4e-85 Identities = 220/239 (92%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2141 gttggagcaccttgtggtgtaatggatcaaatgacatctgcttgtggagaagctaacaaa 2200 Query: 61 cttcttgcaatggtttgccagcctgcagaagtgaaagaattggttagcattccaacccac 120 |||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 2201 cttcttgcaatgatttgtcagcctgcagaagtgaaagagttggtcagcattccaactcac 2260 Query: 121 atacgattttggggtctcgactctgggatacggcatagtgttggtgggactgattacgga 180 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 2261 attcgattttggggtcttgactctgggatacgacatagtgttggtgggactgattatggc 2320 Query: 181 tctgtgagggtaggcacatatatgggacgcaagatgattaagtgtgctgcatctgatct 239 ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 2321 tctgtaagggtaggcacttacatgggacgcaagatgatcaagtgtgctgcatctgatct 2379
>dbj|AK072069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L09, full insert sequence Length = 3647 Score = 268 bits (135), Expect = 2e-68 Identities = 285/335 (85%) Strand = Plus / Plus Query: 319 ctgaaatctgaagcttcgctgcagtatttatgcaacctaccacctcataggtatgaagct 378 |||||||| |||||||| ||| ||||||| |||||| |||||||||| || ||||||||| Sbjct: 2424 ctgaaatccgaagcttccctggagtatttgtgcaacataccacctcacagatatgaagct 2483 Query: 379 gcctatgcgagagatatccctgagctcattactggggatgagtttatgaagaaatatgga 438 ||||| | |||||| || ||| |||||||||| |||| ||| |||||||||||||| Sbjct: 2484 atttatgcaaaagatattccagaggtcattactggagatgcatttttgaagaaatatgga 2543 Query: 439 gatcacaacgatgcagtaacagttgttgacccaaaaagatcttacagtgtgaaggccccc 498 |||||| | ||| ||||||||| ||||||| ||||||||||||| ||||||||| || Sbjct: 2544 gatcacgatgatacagtaacagcaattgaccctaaaagatcttacaatgtgaaggctcct 2603 Query: 499 actagacatcccatctacgagaacttccgcgttgaggccttcaaagcattgttaacagca 558 ||||| |||||||| || |||||||| || |||||| ||||||||||| | ||| |||| Sbjct: 2604 actaggcatcccatatatgagaactttcgagttgagaccttcaaagcactcttagaagca 2663 Query: 559 gccaaaacagacgagcaactgtcagcgcttggagaacttatgtatcagtgccattacagc 618 || || || || |||||| ||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2664 gctaataccgatgagcaattgtcagcccttggagaacttatgtaccagtgccactacagc 2723 Query: 619 tataatgcttgcgggcttggttctgatgggactga 653 |||||||| || || |||||||||||||||||||| Sbjct: 2724 tataatgcatgtggtcttggttctgatgggactga 2758 Score = 234 bits (118), Expect = 3e-58 Identities = 202/230 (87%) Strand = Plus / Plus Query: 4 ggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaactt 63 |||||||| ||||| || ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2118 ggagctccatgtggagtaatggaccaaatgacatctgcttgtggagaagctaacaaactc 2177 Query: 64 cttgcaatggtttgccagcctgcagaagtgaaagaattggttagcattccaacccacata 123 ||||| |||||||||||||||||||||||||| ||||||||| |||||| | || || Sbjct: 2178 cttgcgatggtttgccagcctgcagaagtgaaggaattggttgccattcctaatcatatg 2237 Query: 124 cgattttggggtctcgactctgggatacggcatagtgttggtgggactgattacggatct 183 || ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 2238 cggttttggggtctggactcagggatacggcatagtgttggtgggggagattacggatct 2297 Query: 184 gtgagggtaggcacatatatgggacgcaagatgattaagtgtgctgcatc 233 || ||||||||||| || |||||||| || ||||| |||||||| ||||| Sbjct: 2298 gtaagggtaggcacttacatgggacgaaaaatgatcaagtgtgcagcatc 2347
>dbj|AK067999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F06, full insert sequence Length = 3724 Score = 268 bits (135), Expect = 2e-68 Identities = 285/335 (85%) Strand = Plus / Plus Query: 319 ctgaaatctgaagcttcgctgcagtatttatgcaacctaccacctcataggtatgaagct 378 |||||||| |||||||| ||| ||||||| |||||| |||||||||| || ||||||||| Sbjct: 2801 ctgaaatccgaagcttccctggagtatttgtgcaacataccacctcacagatatgaagct 2860 Query: 379 gcctatgcgagagatatccctgagctcattactggggatgagtttatgaagaaatatgga 438 ||||| | |||||| || ||| |||||||||| |||| ||| |||||||||||||| Sbjct: 2861 atttatgcaaaagatattccagaggtcattactggagatgcatttttgaagaaatatgga 2920 Query: 439 gatcacaacgatgcagtaacagttgttgacccaaaaagatcttacagtgtgaaggccccc 498 |||||| | ||| ||||||||| ||||||| ||||||||||||| ||||||||| || Sbjct: 2921 gatcacgatgatacagtaacagcaattgaccctaaaagatcttacaatgtgaaggctcct 2980 Query: 499 actagacatcccatctacgagaacttccgcgttgaggccttcaaagcattgttaacagca 558 ||||| |||||||| || |||||||| || |||||| ||||||||||| | ||| |||| Sbjct: 2981 actaggcatcccatatatgagaactttcgagttgagaccttcaaagcactcttagaagca 3040 Query: 559 gccaaaacagacgagcaactgtcagcgcttggagaacttatgtatcagtgccattacagc 618 || || || || |||||| ||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 3041 gctaataccgatgagcaattgtcagcccttggagaacttatgtaccagtgccactacagc 3100 Query: 619 tataatgcttgcgggcttggttctgatgggactga 653 |||||||| || || |||||||||||||||||||| Sbjct: 3101 tataatgcatgtggtcttggttctgatgggactga 3135 Score = 234 bits (118), Expect = 3e-58 Identities = 202/230 (87%) Strand = Plus / Plus Query: 4 ggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaactt 63 |||||||| ||||| || ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2495 ggagctccatgtggagtaatggaccaaatgacatctgcttgtggagaagctaacaaactc 2554 Query: 64 cttgcaatggtttgccagcctgcagaagtgaaagaattggttagcattccaacccacata 123 ||||| |||||||||||||||||||||||||| ||||||||| |||||| | || || Sbjct: 2555 cttgcgatggtttgccagcctgcagaagtgaaggaattggttgccattcctaatcatatg 2614 Query: 124 cgattttggggtctcgactctgggatacggcatagtgttggtgggactgattacggatct 183 || ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 2615 cggttttggggtctggactcagggatacggcatagtgttggtgggggagattacggatct 2674 Query: 184 gtgagggtaggcacatatatgggacgcaagatgattaagtgtgctgcatc 233 || ||||||||||| || |||||||| || ||||| |||||||| ||||| Sbjct: 2675 gtaagggtaggcacttacatgggacgaaaaatgatcaagtgtgcagcatc 2724
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 142/166 (85%) Strand = Plus / Minus Query: 370 tatgaagctgcctatgcgagagatatccctgagctcattactggggatgagtttatgaag 429 |||||||||| || ||||||||||| || ||| |||| || ||||||| ||| || || Sbjct: 2232457 tatgaagctgtttacgcgagagatattccagagatcataaccggggatgcatttttggag 2232398 Query: 430 aaatatggagatcacaacgatgcagtaacagttgttgacccaaaaagatcttacagtgtg 489 || ||||||||||| || |||||||||||| ||||||||||||| |||||||| ||||| Sbjct: 2232397 aagtatggagatcataatgatgcagtaacaactgttgacccaaaacgatcttactgtgtg 2232338 Query: 490 aaggcccccactagacatcccatctacgagaacttccgcgttgagg 535 ||||| || ||||||||||| || |||||||||||||| ||||||| Sbjct: 2232337 aaggctcctactagacatcctatatacgagaacttccgagttgagg 2232292 Score = 117 bits (59), Expect = 5e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 157 agtgttggtgggactgattacggatctgtgagggtaggcacatatatgggacgcaagatg 216 |||||||||||||||||||| || ||||| ||||||||||| || ||||||||||||||| Sbjct: 2232760 agtgttggtgggactgattatggctctgtaagggtaggcacttacatgggacgcaagatg 2232701 Query: 217 attaagtgtgctgcatctgatct 239 || |||||||||||||||||||| Sbjct: 2232700 atcaagtgtgctgcatctgatct 2232678 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 79 cagcctgcagaagtgaaagaattggttagcattccaacccacatacgattttggggtctc 138 |||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 2232952 cagcctgcagaagtgaaagagttggtcagcattccaactcacattcgattttggggtctt 2232893 Query: 139 gactctgggatacggcatag 158 |||||||||||||| ||||| Sbjct: 2232892 gactctgggatacgacatag 2232873 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2233136 gttggagcaccttgtggtgtaatggatcaaatgacatctgcttgtggagaagctaacaaa 2233077 Query: 61 cttcttgcaatggtttg 77 |||||||||||| |||| Sbjct: 2233076 cttcttgcaatgatttg 2233060 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 285 ttctgaagaatatgaaaaatatggtgtggagcttctgaaatctgaagcttcgctgcagta 344 |||||| ||||| ||| || ||||||| || ||| ||||||||||||| |||||| |||| Sbjct: 2232626 ttctgatgaatacgaagaacatggtgtagatcttttgaaatctgaagcgtcgctggagta 2232567 Query: 345 tttatgcaacctaccacctcataggt 370 |||||||||||||||||||||||||| Sbjct: 2232566 tttatgcaacctaccacctcataggt 2232541 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 533 aggccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagcgcttggag 592 ||||||||||||||||| |||||||||||||||||| |||||||| || || ||||||| Sbjct: 2232018 aggccttcaaagcattgctaacagcagccaaaacagttgagcaactttcggcccttggag 2231959 Query: 593 aacttatgtatcag 606 || | ||||||||| Sbjct: 2231958 aattgatgtatcag 2231945 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||| | || |||| |||||||||| ||||||| |||||||| |||||| Sbjct: 2328632 gttggagcaccttgctgggtaatgggccaaatgacacctgcttgtggagaagctaacaaa 2328573 Query: 61 cttcttgcaatggtttgcc 79 |||||||||||| |||||| Sbjct: 2328572 cttcttgcaatgatttgcc 2328554 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 604 cagtgccattacagctataatgcttgcgggcttggttctgatgggactgacagg 657 |||||||| |||||||| |||||||| ||||||||||||||||| || |||||| Sbjct: 2231852 cagtgccactacagctacaatgcttgtgggcttggttctgatggaaccgacagg 2231799
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 139 bits (70), Expect = 1e-29 Identities = 142/166 (85%) Strand = Plus / Minus Query: 370 tatgaagctgcctatgcgagagatatccctgagctcattactggggatgagtttatgaag 429 |||||||||| || ||||||||||| || ||| |||| || ||||||| ||| || || Sbjct: 19406 tatgaagctgtttacgcgagagatattccagagatcataaccggggatgcatttttggag 19347 Query: 430 aaatatggagatcacaacgatgcagtaacagttgttgacccaaaaagatcttacagtgtg 489 || ||||||||||| || |||||||||||| ||||||||||||| |||||||| ||||| Sbjct: 19346 aagtatggagatcataatgatgcagtaacaactgttgacccaaaacgatcttactgtgtg 19287 Query: 490 aaggcccccactagacatcccatctacgagaacttccgcgttgagg 535 ||||| || ||||||||||| || |||||||||||||| ||||||| Sbjct: 19286 aaggctcctactagacatcctatatacgagaacttccgagttgagg 19241 Score = 117 bits (59), Expect = 5e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 157 agtgttggtgggactgattacggatctgtgagggtaggcacatatatgggacgcaagatg 216 |||||||||||||||||||| || ||||| ||||||||||| || ||||||||||||||| Sbjct: 19709 agtgttggtgggactgattatggctctgtaagggtaggcacttacatgggacgcaagatg 19650 Query: 217 attaagtgtgctgcatctgatct 239 || |||||||||||||||||||| Sbjct: 19649 atcaagtgtgctgcatctgatct 19627 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 79 cagcctgcagaagtgaaagaattggttagcattccaacccacatacgattttggggtctc 138 |||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 19901 cagcctgcagaagtgaaagagttggtcagcattccaactcacattcgattttggggtctt 19842 Query: 139 gactctgggatacggcatag 158 |||||||||||||| ||||| Sbjct: 19841 gactctgggatacgacatag 19822 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 20085 gttggagcaccttgtggtgtaatggatcaaatgacatctgcttgtggagaagctaacaaa 20026 Query: 61 cttcttgcaatggtttg 77 |||||||||||| |||| Sbjct: 20025 cttcttgcaatgatttg 20009 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 285 ttctgaagaatatgaaaaatatggtgtggagcttctgaaatctgaagcttcgctgcagta 344 |||||| ||||| ||| || ||||||| || ||| ||||||||||||| |||||| |||| Sbjct: 19575 ttctgatgaatacgaagaacatggtgtagatcttttgaaatctgaagcgtcgctggagta 19516 Query: 345 tttatgcaacctaccacctcataggt 370 |||||||||||||||||||||||||| Sbjct: 19515 tttatgcaacctaccacctcataggt 19490 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 533 aggccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagcgcttggag 592 ||||||||||||||||| |||||||||||||||||| |||||||| || || ||||||| Sbjct: 18967 aggccttcaaagcattgctaacagcagccaaaacagttgagcaactttcggcccttggag 18908 Query: 593 aacttatgtatcag 606 || | ||||||||| Sbjct: 18907 aattgatgtatcag 18894 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 604 cagtgccattacagctataatgcttgcgggcttggttctgatgggactgacagg 657 |||||||| |||||||| |||||||| ||||||||||||||||| || |||||| Sbjct: 18801 cagtgccactacagctacaatgcttgtgggcttggttctgatggaaccgacagg 18748
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 390 agatatccctgagctcattactggggatgagtttatgaagaaatatggagatcacaacga 449 |||||| || ||| |||||||||| |||| ||| |||||||||||||||||||| | || Sbjct: 29116960 agatattccagaggtcattactggagatgcatttttgaagaaatatggagatcacgatga 29117019 Query: 450 tgcagtaacagttgttgacccaaaaagatcttacagtgtgaaggcccccactagacatcc 509 | ||||||||| ||||||| ||||||||||||| ||||||||| || ||||| ||||| Sbjct: 29117020 tacagtaacagcaattgaccctaaaagatcttacaatgtgaaggctcctactaggcatcc 29117079 Query: 510 catctacgagaacttccgcgttgagg 535 ||| || |||||||| || ||||||| Sbjct: 29117080 catatatgagaactttcgagttgagg 29117105 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 4 ggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaactt 63 |||||||| ||||| || ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 29116282 ggagctccatgtggagtaatggaccaaatgacatctgcttgtggagaagctaacaaactc 29116341 Query: 64 cttgcaatggtttgccag 81 ||||| |||||||||||| Sbjct: 29116342 cttgcgatggtttgccag 29116359 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 156 tagtgttggtgggactgattacggatctgtgagggtaggcacatatatgggacgcaagat 215 ||||||||||||| |||||||||||||| ||||||||||| || |||||||| || || Sbjct: 29116646 tagtgttggtgggggagattacggatctgtaagggtaggcacttacatgggacgaaaaat 29116705 Query: 216 gattaagtgtgctgcatc 233 ||| |||||||| ||||| Sbjct: 29116706 gatcaagtgtgcagcatc 29116723 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 79 cagcctgcagaagtgaaagaattggttagcattccaacccacatacgattttggggtctc 138 ||||||||||||||||| ||||||||| |||||| | || || || ||||||||||| Sbjct: 29116458 cagcctgcagaagtgaaggaattggttgccattcctaatcatatgcggttttggggtctg 29116517 Query: 139 gactctgggatacggcatag 158 ||||| |||||||||||||| Sbjct: 29116518 gactcagggatacggcatag 29116537 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 604 cagtgccattacagctataatgcttgcgggcttggttctgatgggactga 653 |||||||| |||||||||||||| || || |||||||||||||||||||| Sbjct: 29117584 cagtgccactacagctataatgcatgtggtcttggttctgatgggactga 29117633 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 536 ccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagcgcttggagaac 595 ||||||||||| | ||| |||||| || || || |||||| ||||||| |||||||||| Sbjct: 29117384 ccttcaaagcactcttagaagcagctaataccgatgagcaattgtcagcccttggagaac 29117443 Query: 596 ttatgta 602 ||||||| Sbjct: 29117444 ttatgta 29117450
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 390 agatatccctgagctcattactggggatgagtttatgaagaaatatggagatcacaacga 449 |||||| || ||| |||||||||| |||| ||| |||||||||||||||||||| | || Sbjct: 131947 agatattccagaggtcattactggagatgcatttttgaagaaatatggagatcacgatga 132006 Query: 450 tgcagtaacagttgttgacccaaaaagatcttacagtgtgaaggcccccactagacatcc 509 | ||||||||| ||||||| ||||||||||||| ||||||||| || ||||| ||||| Sbjct: 132007 tacagtaacagcaattgaccctaaaagatcttacaatgtgaaggctcctactaggcatcc 132066 Query: 510 catctacgagaacttccgcgttgagg 535 ||| || |||||||| || ||||||| Sbjct: 132067 catatatgagaactttcgagttgagg 132092 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 4 ggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaactt 63 |||||||| ||||| || ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 131269 ggagctccatgtggagtaatggaccaaatgacatctgcttgtggagaagctaacaaactc 131328 Query: 64 cttgcaatggtttgccag 81 ||||| |||||||||||| Sbjct: 131329 cttgcgatggtttgccag 131346 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 156 tagtgttggtgggactgattacggatctgtgagggtaggcacatatatgggacgcaagat 215 ||||||||||||| |||||||||||||| ||||||||||| || |||||||| || || Sbjct: 131633 tagtgttggtgggggagattacggatctgtaagggtaggcacttacatgggacgaaaaat 131692 Query: 216 gattaagtgtgctgcatc 233 ||| |||||||| ||||| Sbjct: 131693 gatcaagtgtgcagcatc 131710 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 79 cagcctgcagaagtgaaagaattggttagcattccaacccacatacgattttggggtctc 138 ||||||||||||||||| ||||||||| |||||| | || || || ||||||||||| Sbjct: 131445 cagcctgcagaagtgaaggaattggttgccattcctaatcatatgcggttttggggtctg 131504 Query: 139 gactctgggatacggcatag 158 ||||| |||||||||||||| Sbjct: 131505 gactcagggatacggcatag 131524 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 604 cagtgccattacagctataatgcttgcgggcttggttctgatgggactga 653 |||||||| |||||||||||||| || || |||||||||||||||||||| Sbjct: 132571 cagtgccactacagctataatgcatgtggtcttggttctgatgggactga 132620 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 536 ccttcaaagcattgttaacagcagccaaaacagacgagcaactgtcagcgcttggagaac 595 ||||||||||| | ||| |||||| || || || |||||| ||||||| |||||||||| Sbjct: 132371 ccttcaaagcactcttagaagcagctaataccgatgagcaattgtcagcccttggagaac 132430 Query: 596 ttatgta 602 ||||||| Sbjct: 132431 ttatgta 132437
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 |||||||| ||||| | || |||| |||||||||| ||||||| |||||||| |||||| Sbjct: 64709 gttggagcaccttgctgggtaatgggccaaatgacacctgcttgtggagaagctaacaaa 64650 Query: 61 cttcttgcaatggtttgcc 79 |||||||||||| |||||| Sbjct: 64649 cttcttgcaatgatttgcc 64631
>ref|NM_117706.2| Arabidopsis thaliana ARA1 (ARABINOSE SENSITIVE 1); ATP binding / galactokinase AT4G16130 (ARA1) mRNA, complete cds Length = 3410 Score = 48.1 bits (24), Expect = 0.037 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 ||||||||||| |||||||| ||||| || ||||| ||| | || || |||||||| ||| Sbjct: 2217 gttggagctccatgtggtgttatggatcagatgacttcttcctgtggggaagccaataaa 2276 Query: 61 cttcttgcaatggtttgccagcctgcagaagt 92 || | || ||| | ||||| ||||||||||| Sbjct: 2277 ctgttggccatgatctgccaacctgcagaagt 2308
>ref|NM_114153.1| Arabidopsis thaliana ATP binding / galactokinase/ kinase/ phosphotransferase, alcohol group as acceptor AT3G42850 mRNA, complete cds Length = 2895 Score = 48.1 bits (24), Expect = 0.037 Identities = 51/60 (85%) Strand = Plus / Plus Query: 499 actagacatcccatctacgagaacttccgcgttgaggccttcaaagcattgttaacagca 558 ||||||||||| || || ||||| ||||| || |||| |||||||||||||| |||||| Sbjct: 2470 actagacatccaatttatgagaatttccgtgtgcaggctttcaaagcattgttgacagca 2529
>gb|BT003908.1| Arabidopsis thaliana clone RAFL15-15-P11 (R20658) At4g16130 mRNA, complete sequence Length = 3392 Score = 48.1 bits (24), Expect = 0.037 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 ||||||||||| |||||||| ||||| || ||||| ||| | || || |||||||| ||| Sbjct: 2215 gttggagctccatgtggtgttatggatcagatgacttcttcctgtggggaagccaataaa 2274 Query: 61 cttcttgcaatggtttgccagcctgcagaagt 92 || | || ||| | ||||| ||||||||||| Sbjct: 2275 ctgttggccatgatctgccaacctgcagaagt 2306
>emb|Y14404.1|ATY14404 Arabidopsis thaliana ISA1 gene Length = 3352 Score = 48.1 bits (24), Expect = 0.037 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 ||||||||||| |||||||| ||||| || ||||| ||| | || || |||||||| ||| Sbjct: 2187 gttggagctccatgtggtgttatggatcagatgacttcttcctgtggggaagccaataaa 2246 Query: 61 cttcttgcaatggtttgccagcctgcagaagt 92 || | || ||| | ||||| ||||||||||| Sbjct: 2247 ctgttggccatgatctgccaacctgcagaagt 2278
>gb|DQ447188.1| Spodoptera frugiperda trehalase mRNA, complete cds Length = 1764 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 418 gagtttatgaagaaatatggaga 440 ||||||||||||||||||||||| Sbjct: 1651 gagtttatgaagaaatatggaga 1673
>ref|XM_961933.1| PREDICTED: Tribolium castaneum similar to CG8274-PA (LOC655393), mRNA Length = 6954 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 gcagaagtgaaagaattggtta 106 |||||||||||||||||||||| Sbjct: 2104 gcagaagtgaaagaattggtta 2125
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 ||||||||||| |||||||| ||||| || ||||| ||| | || || |||||||| ||| Sbjct: 92748 gttggagctccatgtggtgttatggatcagatgacttcttcctgtggggaagccaataaa 92807 Query: 61 ct 62 || Sbjct: 92808 ct 92809
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 ||||||||||| |||||||| ||||| || ||||| ||| | || || |||||||| ||| Sbjct: 61738 gttggagctccatgtggtgttatggatcagatgacttcttcctgtggggaagccaataaa 61797 Query: 61 ct 62 || Sbjct: 61798 ct 61799
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the 5' end of Ntn1 gene for netrin 1, three genes for a novel proteins (F730038I15Rik), the 3' end of a novel gene (4930535C22Rik) and two CpG islands, complete sequence Length = 221455 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 tcattactggggatgagtttatgaag 429 |||| ||||||||||||||||||||| Sbjct: 99298 tcatgactggggatgagtttatgaag 99323
>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence Length = 200028 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 419 agtttatgaagaaatatggaga 440 |||||||||||||||||||||| Sbjct: 51470 agtttatgaagaaatatggaga 51491
>gb|AC018475.32| Homo sapiens 12 BAC RP11-490G8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152757 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 547 ttgttaacagcagccaaaacagacga 572 ||||||||||||||| |||||||||| Sbjct: 123854 ttgttaacagcagcccaaacagacga 123829
>emb|Y14403.1|ATY14403 Arabidopsis thaliana SEB1, ISA1 genes Length = 13973 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1 gttggagctccttgtggtgtgatggaccaaatgacatctgcttgcggagaagccaacaaa 60 ||||||||||| |||||||| ||||| || ||||| ||| | || || |||||||| ||| Sbjct: 11605 gttggagctccatgtggtgttatggatcagatgacttcttcctgtggggaagccaataaa 11664 Query: 61 ct 62 || Sbjct: 11665 ct 11666
>ref|XM_415031.1| PREDICTED: Gallus gallus similar to KIAA1264 protein (LOC416734), mRNA Length = 5343 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 caactgtcagcgcttggagaa 594 ||||||||||||||||||||| Sbjct: 1549 caactgtcagcgcttggagaa 1569
>emb|AL139189.14| Human DNA sequence from clone RP11-94F16 on chromosome 13, complete sequence Length = 119395 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 tctgaagaatatgaaaaatat 306 ||||||||||||||||||||| Sbjct: 20351 tctgaagaatatgaaaaatat 20371
>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR35N03, complete sequence Length = 169271 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 tgccagcctgcagaagtgaaa 96 ||||||||||||||||||||| Sbjct: 46026 tgccagcctgcagaagtgaaa 46006
>gb|AC097500.3| Homo sapiens BAC clone RP11-335G13 from 2, complete sequence Length = 180215 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 tttatgaagaaatatggagat 441 ||||||||||||||||||||| Sbjct: 177698 tttatgaagaaatatggagat 177678
>gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86 of 118 of the complete sequence Length = 253272 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 tgccagcctgcagaagtgaaa 96 ||||||||||||||||||||| Sbjct: 240052 tgccagcctgcagaagtgaaa 240072
>ref|NM_001016322.2| Xenopus tropicalis hypothetical protein LOC549076 (LOC549076), mRNA Length = 1831 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 tggagcttctgaaatctgaagctt 334 |||||||||||| ||||||||||| Sbjct: 1081 tggagcttctgagatctgaagctt 1104
>gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome 3, complete sequence Length = 165047 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ttctgaagaatatgaaaaat 304 |||||||||||||||||||| Sbjct: 2017 ttctgaagaatatgaaaaat 1998
>gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, complete sequence Length = 234874 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ttctgaagaatatgaaaaat 304 |||||||||||||||||||| Sbjct: 112274 ttctgaagaatatgaaaaat 112293
>gb|AC153871.5| Mus musculus 10 BAC RP23-402I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186142 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 agagatatccctgagctcat 407 |||||||||||||||||||| Sbjct: 139716 agagatatccctgagctcat 139735
>emb|AL356137.10| Human DNA sequence from clone RP11-515I12 on chromosome 6, complete sequence Length = 135837 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 agttgttgacccaaaaagat 478 |||||||||||||||||||| Sbjct: 94066 agttgttgacccaaaaagat 94047
>gb|AC131066.8| Mus musculus, clone RP23-373E24, complete sequence Length = 174546 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 agagatatccctgagctcat 407 |||||||||||||||||||| Sbjct: 120630 agagatatccctgagctcat 120611
>emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 9/17 Length = 336609 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 tgagtttatgaagaaatatg 436 |||||||||||||||||||| Sbjct: 40033 tgagtttatgaagaaatatg 40014
>gb|AC103768.2| Homo sapiens chromosome 18, clone RP11-108G18, complete sequence Length = 180473 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcttctgaagaatatgaaaa 302 |||||||||||||||||||| Sbjct: 86246 gcttctgaagaatatgaaaa 86265
>gb|AC103774.2| Homo sapiens chromosome 18, clone RP11-177E16, complete sequence Length = 175384 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcttctgaagaatatgaaaa 302 |||||||||||||||||||| Sbjct: 85847 gcttctgaagaatatgaaaa 85866
>gb|AC096566.2| Homo sapiens BAC clone RP11-292B1 from 4, complete sequence Length = 101931 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 agttgttgacccaaaaagat 478 |||||||||||||||||||| Sbjct: 38102 agttgttgacccaaaaagat 38121
>emb|BX897661.7| Zebrafish DNA sequence from clone DKEY-261N7 in linkage group 7, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tgtggagcttctgaaatctg 328 |||||||||||||||||||| Sbjct: 127181 tgtggagcttctgaaatctg 127200
>emb|BX088559.18| Zebrafish DNA sequence from clone DKEY-238P16 in linkage group 7, complete sequence Length = 159610 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tgtggagcttctgaaatctg 328 |||||||||||||||||||| Sbjct: 140352 tgtggagcttctgaaatctg 140371
>gb|AC153553.4| Mus musculus 10 BAC RP23-329D17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185583 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcaagatgattaagtgtgct 228 |||||||||||||||||||| Sbjct: 44612 gcaagatgattaagtgtgct 44631
>gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, complete sequence Length = 161500 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 taacagcagccaaaacagac 570 |||||||||||||||||||| Sbjct: 96001 taacagcagccaaaacagac 95982
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 atgcaacctaccacctcata 367 |||||||||||||||||||| Sbjct: 1773236 atgcaacctaccacctcata 1773217
>gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, complete sequence Length = 190436 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 aagaatatgaaaaatatggt 309 |||||||||||||||||||| Sbjct: 106033 aagaatatgaaaaatatggt 106052
>emb|CR761454.2| Xenopus tropicalis finished cDNA, clone TGas126d14 Length = 1831 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 tggagcttctgaaatctgaagctt 334 |||||||||||| ||||||||||| Sbjct: 1081 tggagcttctgagatctgaagctt 1104
>dbj|AP003056.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-372E19, complete sequences Length = 85000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatatgaaaaatatggtg 310 |||||||||||||||||||| Sbjct: 62726 agaatatgaaaaatatggtg 62745
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tgaagaatatgaaaaatatggtgt 311 ||||||| |||||||||||||||| Sbjct: 739216 tgaagaagatgaaaaatatggtgt 739193
>gb|AC154369.1| Mus musculus BAC clone RP24-572H8 from 17, complete sequence Length = 165594 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tgaagaatatgaaaaatatg 307 |||||||||||||||||||| Sbjct: 70275 tgaagaatatgaaaaatatg 70256 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,245,760 Number of Sequences: 3902068 Number of extensions: 5245760 Number of successful extensions: 120577 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120359 Number of HSP's gapped (non-prelim): 218 length of query: 657 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 634 effective length of database: 17,143,297,704 effective search space: 10868850744336 effective search space used: 10868850744336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
