ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 37 0.021
2CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 37 0.021
3CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 37 0.021
4CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 37 0.021
5CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 37 0.021
6CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 37 0.021
7CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 37 0.021
8CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 37 0.021
9CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 37 0.021
10CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 37 0.021
11CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 37 0.021
12CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 37 0.021
13CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 37 0.021
14CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 37 0.021
15CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 37 0.021
16CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 37 0.021
17CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 37 0.021
18CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 37 0.021
19CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 37 0.021
20CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 37 0.021
21CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 37 0.021
22CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 37 0.021
23CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 37 0.021
24CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 37 0.021
25CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 37 0.021
26CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 35 0.061
27CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 33 0.23
28CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 33 0.30
29CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 33 0.30
30CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 33 0.30
31CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 33 0.30
32CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 33 0.30
33CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 33 0.30
34CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 33 0.30
35CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 33 0.30
36CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 33 0.30
37CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 33 0.30
38CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 33 0.30
39CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 33 0.30
40CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 33 0.30
41CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 33 0.30
42CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 33 0.30
43CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 33 0.30
44CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 33 0.30
45CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 33 0.30
46CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 33 0.30
47CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 33 0.30
48CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 32 0.52
49CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 32 0.52
50CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 32 0.52
51CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 32 0.52
52CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 30 1.5
53CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 30 2.6
54CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 28 5.7
55CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 28 7.4 
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 100 VIHCRWAMLGALGC 113
to top
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 100 VIHCRWAMLGALGC 113
to top
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 100 VIHCRWAMLGALGC 113
to top
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 100 VIHCRWAMLGALGC 113
to top
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 99  VIHCRWAMLGALGC 112
to top
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 100 VIHCRWAMLGALGC 113
to top
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 101 VIHCRWAMLGALGC 114
to top
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 98  VIHCRWAMLGALGC 111
to top
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 108 VIHCRWAMLGALGC 121
to top
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWAMLGALGC
Sbjct: 71  VIHCRWAMLGALGC 84
to top
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 35.0 bits (79), Expect = 0.061
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRW MLGALGC
Sbjct: 100 VIHCRWTMLGALGC 113
to top
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 102 VIHARWAMLGALGC 115
to top
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 79  VIHSRWAMLGALGC 92
to top
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 89  VIHSRWAMLGALGC 102
to top
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 112 VIHSRWAMLGALGC 125
to top
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 112 VIHSRWAMLGALGC 125
to top
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 99  VIHSRWAMLGALGC 112
to top
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 99  VIHSRWAMLGALGC 112
to top
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 99  VIHSRWAMLGALGC 112
to top
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 98  VIHSRWAMLGALGC 111
to top
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 99  VIHSRWAMLGALGC 112
to top
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 96  VIHSRWAMLGALGC 109
to top
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 98  VIHSRWAMLGALGC 111
to top
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 90  VIHSRWAMLGALGC 103
to top
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 102 VIHSRWAMLGALGC 115
to top
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 103 VIHSRWAMLGALGC 116
to top
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 97  VIHSRWAMLGALGC 110
to top
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 97  VIHSRWAMLGALGC 110
to top
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 100 VIHSRWAMLGALGC 113
to top
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 100 VIHSRWAMLGALGC 113
to top
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 95  VIHSRWAMLGALGC 108
to top
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 62  VIHSRWAMLGALGC 75
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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.52
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 97  VIHGRWAMLGALGC 110
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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 32.0 bits (71), Expect = 0.52
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 98  VIHGRWAMLGALGC 111
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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 32.0 bits (71), Expect = 0.52
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           +IH RWAMLGALGC
Sbjct: 87  LIHARWAMLGALGC 100
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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 32.0 bits (71), Expect = 0.52
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIH RWAMLGALGC
Sbjct: 100 VIHGRWAMLGALGC 113
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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
          (Chlorophyll a-b binding protein of LHCII type I) (CAB)
          (LHCP) (Fragment)
          Length = 206

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 1  VIHCRWAMLGALGC 42
          VIH  WAMLGALGC
Sbjct: 40 VIHSTWAMLGALGC 53
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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALG 39
           ++HCRWAMLGA G
Sbjct: 108 LVHCRWAMLGAAG 120
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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   VIHCRWAMLGALG 39
           VIH RWA+LGALG
Sbjct: 89  VIHARWALLGALG 101
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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 1   VIHCRWAMLGALGC 42
           VIHCRWA+   LGC
Sbjct: 98  VIHCRWAIAVGLGC 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,763,450
Number of Sequences: 219361
Number of extensions: 18707
Number of successful extensions: 92
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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