ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, co... 343 2e-91
2gb|AY110563.1| Zea mays CL897_1 mRNA sequence 52 0.001
3gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 48 0.018
4gb|AY110047.1| Zea mays CL878_1 mRNA sequence 48 0.018
5ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.28
6gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.28
8gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom... 44 0.28
9gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ... 44 0.28
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
11ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
12ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
13ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
14gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.1
15gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
16gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.1
17emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease 42 1.1
18gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 1.1
19emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.1
20emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.1
21emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.1
22emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 42 1.1
23emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 1.1
24emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 42 1.1
25emb|AJ428571.1|AEV428571 Azoarcus evansii partial padR gene, pad... 42 1.1
26dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.1
29dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.1
30dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
31dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
32dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
33dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
34gb|AY109416.1| Zea mays CL694_1 mRNA sequence 42 1.1
35dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene... 42 1.1
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
37ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
38gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
39ref|XM_848249.1| PREDICTED: Canis familiaris similar to TSPY-lik... 40 4.4
40emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 40 4.4
41gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.4
42gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine p... 40 4.4
43emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine pro... 40 4.4
44emb|CR857593.1| Pongo pygmaeus mRNA; cDNA DKFZp469H1115 (from cl... 40 4.4
45dbj|AK125157.1| Homo sapiens cDNA FLJ43167 fis, clone FCBBF3004041 40 4.4
46gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 40 4.4
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
49gb|AF133838.1| Sandersonia aurantiaca papain-like cysteine prote... 40 4.4
50dbj|AB186750.1| Sphingomonas paucimobilis orf1, orf2, ligM, metF... 40 4.4
51gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complet... 40 4.4
52dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.4
53dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
54dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
55gb|AY104208.1| Zea mays PCO086864 mRNA sequence 40 4.4
56gb|AY944523.1| Unidentified soil organism clone XIX-33 from Aust... 40 4.4
57emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 40 4.4
58dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.4 
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds
          Length = 1260

 Score =  343 bits (173), Expect = 2e-91
 Identities = 257/285 (90%), Gaps = 2/285 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcatgcggatgctgctgggcgtttgctgcggtggcgacggtggagagcttgaacaagata 60
           ||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 547 gcatgtggatgctgctgggcatttgctgcagcggcgacggtggagagcttgaacaagata 606

                                                                       
Query: 61  aatggcggggtagctggtggacctgtcggngcangagctggtggactgcagcacgggtgt 120
           |||||||||| ||||||| |||||||| | ||| ||||||||||||||||||||||| ||
Sbjct: 607 aatggcgggg-agctggttgacctgtccgtgcaggagctggtggactgcagcacgggcgt 665

                                                                       
Query: 121 gttcagctcgccgtgcggctacgggtggcccaagagcgcactccagtggatcaaatcaaa 180
           |||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||
Sbjct: 666 gttcagctcgccatgcggctacgggtggcccaagagcgcactcgcatggatcaaatcaaa 725

                                                                       
Query: 181 aggtggnctcctcacngaggccgagtacccntacntggccaagcgaggcagatgcgaggt 240
           ||| || |||||||| |||||||||||||| ||| ||||||||||||||||||||| |||
Sbjct: 726 agggggcctcctcacggaggccgagtacccctacatggccaagcgaggcagatgcgcggt 785

                                                        
Query: 241 gcacgacgccgnccgacgcatcggcaagatcaccggcgtncagga 285
           ||||||| | | ||| ||  ||||||| ||||||||||| |||||
Sbjct: 786 gcacgacacagcccg-cgtgtcggcaaaatcaccggcgtccagga 829
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>gb|AY110563.1| Zea mays CL897_1 mRNA sequence
          Length = 794

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 66  cggggtagctggtggacctgtcggngcangagctggtggactgc 109
           ||||| ||||||||  |||||||| ||| |||||||||||||||
Sbjct: 109 cggggaagctggtgtccctgtcggagcaggagctggtggactgc 152
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 108     gcagcacgggtgtgttcagctcgc 131
               ||||||||||||||||||||||||
Sbjct: 3667548 gcagcacgggtgtgttcagctcgc 3667525
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>gb|AY110047.1| Zea mays CL878_1 mRNA sequence
          Length = 1403

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 72  agctggtggacctgtcggngcangagctggtggactgc 109
           ||||||||  |||||||| ||| |||||||||||||||
Sbjct: 589 agctggtgtccctgtcggagcaggagctggtggactgc 626
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>ref|XM_469786.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1460

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 66  cggggtagctggtggacctgtcggngcangagctggtggactgc 109
           ||||| ||||||||   ||||||| ||| |||||||||||||||
Sbjct: 572 cggggcagctggtgtcgctgtcggagcaggagctggtggactgc 615
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>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 66    cggggtagctggtggacctgtcggngcangagctggtggactgc 109
             ||||| ||||||||   ||||||| ||| |||||||||||||||
Sbjct: 71922 cggggcagctggtgtcgctgtcggagcaggagctggtggactgc 71879
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 66       cggggtagctggtggacctgtcggngcangagctggtggactgc 109
                ||||| ||||||||   ||||||| ||| |||||||||||||||
Sbjct: 30731861 cggggcagctggtgtcgctgtcggagcaggagctggtggactgc 30731904
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>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 66    cggggtagctggtggacctgtcggngcangagctggtggactgc 109
             ||||| ||||||||   ||||||| ||| |||||||||||||||
Sbjct: 30529 cggggcagctggtgtcgctgtcggagcaggagctggtggactgc 30486
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>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 66    cggggtagctggtggacctgtcggngcangagctggtggactgc 109
             ||||| ||||||||   ||||||| ||| |||||||||||||||
Sbjct: 40562 cggggcagctggtgtcgctgtcggagcaggagctggtggactgc 40605
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 66       cggggtagctggtggacctgtcggngcangagctggtggactgc 109
                ||||| ||||||||   ||||||| ||| |||||||||||||||
Sbjct: 30823285 cggggcagctggtgtcgctgtcggagcaggagctggtggactgc 30823328
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>ref|NM_184000.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1026

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 83  ctgtcggngcangagctggtggactgc 109
           ||||||| ||| |||||||||||||||
Sbjct: 508 ctgtcggagcaggagctggtggactgc 534
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>ref|NM_183998.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1029

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 83  ctgtcggngcangagctggtggactgc 109
           ||||||| ||| |||||||||||||||
Sbjct: 511 ctgtcggagcaggagctggtggactgc 537
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>ref|NM_183859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1074

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 83  ctgtcggngcangagctggtggactgc 109
           ||||||| ||| |||||||||||||||
Sbjct: 538 ctgtcggagcaggagctggtggactgc 564
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 311     gcgctggcgctggccgtgctc 331
               |||||||||||||||||||||
Sbjct: 2787919 gcgctggcgctggccgtgctc 2787899
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>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026D03 map near S2137, complete sequence
          Length = 115141

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 83    ctgtcggngcangagctggtggactgc 109
             ||||||| ||| |||||||||||||||
Sbjct: 33237 ctgtcggagcaggagctggtggactgc 33263
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 298     gagcaacgaggacgcgctggc 318
               |||||||||||||||||||||
Sbjct: 1399401 gagcaacgaggacgcgctggc 1399381
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>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease
          Length = 1440

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 83  ctgtcggngcangagctggtggactgc 109
           ||||||| ||| |||||||||||||||
Sbjct: 661 ctgtcggagcaggagctggtggactgc 687
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 257    cgcatcggcaagatcaccggc 277
              |||||||||||||||||||||
Sbjct: 408078 cgcatcggcaagatcaccggc 408098
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 257     cgcatcggcaagatcaccggc 277
               |||||||||||||||||||||
Sbjct: 3397999 cgcatcggcaagatcaccggc 3398019
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 257    cgcatcggcaagatcaccggc 277
              |||||||||||||||||||||
Sbjct: 190311 cgcatcggcaagatcaccggc 190291
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    cgcgctggcgctggccgtgct 330
              |||||||||||||||||||||
Sbjct: 167306 cgcgctggcgctggccgtgct 167286
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   cgcgctggcgctggccgtgct 330
             |||||||||||||||||||||
Sbjct: 79306 cgcgctggcgctggccgtgct 79286
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   cgcatcggcaagatcaccggc 277
             |||||||||||||||||||||
Sbjct: 47906 cgcatcggcaagatcaccggc 47926
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   cgcatcggcaagatcaccggc 277
             |||||||||||||||||||||
Sbjct: 59682 cgcatcggcaagatcaccggc 59662
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>emb|AJ428571.1|AEV428571 Azoarcus evansii partial padR gene, padA gene, padB gene, padC gene,
             padD gene, padE gene, padF gene, padG gene, padH gene,
             padI gene, padJ gene, ORFA, ORFB and ORFC
          Length = 16922

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   cgcatcggcaagatcaccggc 277
             |||||||||||||||||||||
Sbjct: 12145 cgcatcggcaagatcaccggc 12165
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 83      ctgtcggngcangagctggtggactgc 109
               ||||||| ||| |||||||||||||||
Sbjct: 8299163 ctgtcggagcaggagctggtggactgc 8299137
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 83       ctgtcggngcangagctggtggactgc 109
                ||||||| ||| |||||||||||||||
Sbjct: 13831389 ctgtcggagcaggagctggtggactgc 13831363



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 83       ctgtcggngcangagctggtggactgc 109
                ||||||| ||| |||||||||||||||
Sbjct: 13825868 ctgtcggagcaggagctggtggactgc 13825894



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 83       ctgtcggngcangagctggtggactgc 109
                ||||||| ||| |||||||||||||||
Sbjct: 12729172 ctgtcggagcaggagctggtggactgc 12729146
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 304     cgaggacgcgctggcgctggc 324
               |||||||||||||||||||||
Sbjct: 2818896 cgaggacgcgctggcgctggc 2818876
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    gcgctggcgctggccgtgctc 331
              |||||||||||||||||||||
Sbjct: 866178 gcgctggcgctggccgtgctc 866198
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 83    ctgtcggngcangagctggtggactgc 109
             ||||||| ||| |||||||||||||||
Sbjct: 68792 ctgtcggagcaggagctggtggactgc 68766



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 83    ctgtcggngcangagctggtggactgc 109
             ||||||| ||| |||||||||||||||
Sbjct: 63271 ctgtcggagcaggagctggtggactgc 63297
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>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0489E06
          Length = 140229

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 83   ctgtcggngcangagctggtggactgc 109
            ||||||| ||| |||||||||||||||
Sbjct: 9571 ctgtcggagcaggagctggtggactgc 9545
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>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0554D10
          Length = 158723

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 83    ctgtcggngcangagctggtggactgc 109
             ||||||| ||| |||||||||||||||
Sbjct: 96201 ctgtcggagcaggagctggtggactgc 96175
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>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full
           insert sequence
          Length = 1511

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 83  ctgtcggngcangagctggtggactgc 109
           ||||||| ||| |||||||||||||||
Sbjct: 667 ctgtcggagcaggagctggtggactgc 693
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>gb|AY109416.1| Zea mays CL694_1 mRNA sequence
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 83   ctgtcggngcangagctggtggactgc 109
            ||||||| ||| |||||||||||||||
Sbjct: 3115 ctgtcggagcaggagctggtggactgc 3089
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>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine
            endopeptidase, complete cds
          Length = 3836

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 83   ctgtcggngcangagctggtggactgc 109
            ||||||| ||| |||||||||||||||
Sbjct: 1771 ctgtcggagcaggagctggtggactgc 1797
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 83      ctgtcggngcangagctggtggactgc 109
               ||||||| ||| |||||||||||||||
Sbjct: 8369926 ctgtcggagcaggagctggtggactgc 8369900
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>ref|XM_470991.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 83  ctgtcggngcangagctggtggactg 108
           ||||||| ||| ||||||||||||||
Sbjct: 619 ctgtcggagcaagagctggtggactg 644
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01,
              complete sequence
          Length = 152233

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                                
Query: 83     ctgtcggngcangagctggtggactgcagcacgg 116
              ||||||| ||| |||||| | |||||||||||||
Sbjct: 116994 ctgtcggagcaggagctgatcgactgcagcacgg 117027
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>ref|XM_848249.1| PREDICTED: Canis familiaris similar to TSPY-like 5 (LOC610706),
           mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 gctggcgctggccgtgctca 332
           ||||||||||||||||||||
Sbjct: 929 gctggcgctggccgtgctca 948
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>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    atcggcaagatcaccggcgt 279
              ||||||||||||||||||||
Sbjct: 272699 atcggcaagatcaccggcgt 272680
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 306     aggacgcgctggcgctggcc 325
               ||||||||||||||||||||
Sbjct: 2231891 aggacgcgctggcgctggcc 2231910
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>gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine protease CP1 mRNA,
           complete cds
          Length = 1227

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                             
Query: 83  ctgtcggngcangagctggtggactgcagcacgg 116
           ||||||| ||| |||||| | |||||||||||||
Sbjct: 577 ctgtcggagcaggagctgatcgactgcagcacgg 610
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>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
          Length = 5593

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 10   tgctgctgggcgtttgctgcggtggcgacggtggag 45
            ||||||||||||||  | ||||||||| ||||||||
Sbjct: 4331 tgctgctgggcgttctcggcggtggcggcggtggag 4366
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>emb|CR857593.1| Pongo pygmaeus mRNA; cDNA DKFZp469H1115 (from clone DKFZp469H1115)
          Length = 4699

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gcgctggcgctggccgtgct 330
           ||||||||||||||||||||
Sbjct: 158 gcgctggcgctggccgtgct 139
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>dbj|AK125157.1| Homo sapiens cDNA FLJ43167 fis, clone FCBBF3004041
          Length = 2595

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gcgctggcgctggccgtgct 330
           ||||||||||||||||||||
Sbjct: 190 gcgctggcgctggccgtgct 171
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>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                               
Query: 83    ctgtcggngcangagctggtggactgcagcacgg 116
             ||||||| ||| |||||| | |||||||||||||
Sbjct: 55145 ctgtcggagcaggagctgatcgactgcagcacgg 55178
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 83     ctgtcggngcangagctggtggactg 108
              ||||||| ||| ||||||||||||||
Sbjct: 462410 ctgtcggagcaagagctggtggactg 462385
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                                
Query: 83     ctgtcggngcangagctggtggactgcagcacgg 116
              ||||||| ||| |||||| | |||||||||||||
Sbjct: 455347 ctgtcggagcaggagctgatcgactgcagcacgg 455380
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>gb|AF133838.1| Sandersonia aurantiaca papain-like cysteine protease (PRT15) mRNA,
           partial cds
          Length = 1456

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 83  ctgtcggngcangagctggtggactg 108
           ||||||| ||| ||||||||||||||
Sbjct: 262 ctgtcggagcaggagctggtggactg 287
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>dbj|AB186750.1| Sphingomonas paucimobilis orf1, orf2, ligM, metF, ligH genes for
            putative formaldehyde dehydrogenase, putative alkyl
            salicylate esterase, vanillate/3-O-methylgallate
            O-demethylase, 5,10-methylenetetrahydrofolate reductase,
            10-formyltetrahydrofolate synthetase, partial and
            complete cds
          Length = 9491

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  acgaggacgcgctggcgctg 322
            ||||||||||||||||||||
Sbjct: 4136 acgaggacgcgctggcgctg 4155
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>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence
          Length = 154728

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   gcgctggcgctggccgtgct 330
             ||||||||||||||||||||
Sbjct: 79461 gcgctggcgctggccgtgct 79442
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     ggacgcgctggcgctggccg 326
               ||||||||||||||||||||
Sbjct: 4497657 ggacgcgctggcgctggccg 4497676
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>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full
           insert sequence
          Length = 1377

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 83  ctgtcggngcangagctggtggactg 108
           ||||||| ||| ||||||||||||||
Sbjct: 644 ctgtcggagcaagagctggtggactg 669
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>dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G09, full
           insert sequence
          Length = 1409

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                             
Query: 83  ctgtcggngcangagctggtggactgcagcacgg 116
           ||||||| ||| |||||| | |||||||||||||
Sbjct: 635 ctgtcggagcaggagctgatcgactgcagcacgg 668
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>gb|AY104208.1| Zea mays PCO086864 mRNA sequence
          Length = 941

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 cgctggcgctggccgtgctc 331
           ||||||||||||||||||||
Sbjct: 205 cgctggcgctggccgtgctc 224
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>gb|AY944523.1| Unidentified soil organism clone XIX-33 from Australia
           environmental-sample
          Length = 696

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 106 ctgcagcacgggtgtgttcagctcgccg 133
           ||||||||| |||||| |||||||||||
Sbjct: 86  ctgcagcaccggtgtgatcagctcgccg 113
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
              complete sequence
          Length = 130249

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 83     ctgtcggngcangagctggtggactg 108
              ||||||| ||| ||||||||||||||
Sbjct: 101162 ctgtcggagcaagagctggtggactg 101137
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      catgcggatgctgctgggcg 21
              ||||||||||||||||||||
Sbjct: 630755 catgcggatgctgctgggcg 630774


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,558,528
Number of Sequences: 3902068
Number of extensions: 1558528
Number of successful extensions: 34200
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33122
Number of HSP's gapped (non-prelim): 1076
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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