ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2m21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1092 bits (551), Expect = 0.0 Identities = 561/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120025 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119966 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119965 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 119906 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119905 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 119846 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119845 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 119786 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119785 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 119726 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119725 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 119666 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119665 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 119606 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119605 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 119546 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119545 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 119487 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 119486 aagaatgagccggcgactcatag 119464 Score = 1092 bits (551), Expect = 0.0 Identities = 561/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94869 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 94928 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94929 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 94988 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94989 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 95048 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95049 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 95108 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95109 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 95168 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95169 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 95228 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95229 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95288 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95289 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 95348 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95349 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 95407 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 95408 aagaatgagccggcgactcatag 95430
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118806 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 118747 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 118746 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 118687 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118686 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 118627 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118626 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 118567 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118566 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 118507 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 118506 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 118447 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118446 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 118387 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118386 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 118327 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118326 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 118268 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 118267 aagaatgagccggcgactcatag 118245
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 877 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 876 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 817 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 757 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 697 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 637 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 636 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 577 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 517 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 457 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 456 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 398 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 397 aagaatgagccggcgactcatag 375
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119890 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119831 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119830 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 119771 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119770 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 119711 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119710 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 119651 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119650 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 119591 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119590 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 119531 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119530 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 119471 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119470 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 119411 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119410 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 119352 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 119351 aagaatgagccggcgactcatag 119329 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95266 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 95325 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95326 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 95385 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95386 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 95445 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95446 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 95505 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95506 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 95565 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95566 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 95625 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95626 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95685 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95686 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 95745 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95746 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 95804 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 95805 aagaatgagccggcgactcatag 95827
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119890 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119831 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119830 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 119771 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119770 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 119711 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119710 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 119651 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119650 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 119591 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119590 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 119531 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119530 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 119471 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119470 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 119411 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119410 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 119352 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 119351 aagaatgagccggcgactcatag 119329 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95266 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 95325 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95326 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 95385 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95386 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 95445 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95446 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 95505 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95506 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 95565 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95566 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 95625 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95626 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95685 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95686 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 95745 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95746 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 95804 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 95805 aagaatgagccggcgactcatag 95827
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119839 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119780 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119779 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 119720 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119719 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 119660 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119659 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 119600 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119599 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 119540 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119539 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 119480 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119479 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 119420 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119419 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 119360 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119359 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 119301 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 119300 aagaatgagccggcgactcatag 119278 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95211 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 95270 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95271 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 95330 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95331 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 95390 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95391 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 95450 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95451 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 95510 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95511 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 95570 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95571 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95630 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95631 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 95690 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95691 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 95749 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 95750 aagaatgagccggcgactcatag 95772
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507844 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 31507903 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31507904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 31507963 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507964 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 31508023 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508024 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 31508083 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508084 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 31508143 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31508144 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 31508203 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508204 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 31508263 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508264 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 31508323 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31508324 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 31508382 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 31508383 aagaatgagccggcgactcatag 31508405
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84752 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 84693 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 84692 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 84633 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84632 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 84573 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84572 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 84513 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84512 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 84453 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 84452 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 84393 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84392 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 84333 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84332 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 84273 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84272 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 84214 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 84213 aagaatgagccggcgactcatag 84191
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119859 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119800 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119799 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 119740 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 119680 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 119620 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 119560 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119559 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 119500 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 119440 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119439 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 119380 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119379 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 119321 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 119320 aagaatgagccggcgactcatag 119298 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95259 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 95318 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95319 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 95378 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 95438 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95439 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 95498 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95499 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 95558 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95559 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 95618 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95619 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95678 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95679 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 95738 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95739 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 95797 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 95798 aagaatgagccggcgactcatag 95820
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122308 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 122367 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122368 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 122427 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122428 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 122487 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122488 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 122547 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122548 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 122607 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122608 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 122667 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122668 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 122727 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122728 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 122787 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122788 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 122846 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 122847 aagaatgagccggcgactcatag 122869 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14033 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 14092 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 14093 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 14152 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14153 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 14212 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14213 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 14272 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14273 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 14332 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 14333 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 14392 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14393 ctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 14452 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14453 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 14512 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14513 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 14571 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 14572 aagaatgagccggcgactcatag 14594
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44850 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 44791 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44790 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 44731 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44730 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 44671 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44670 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 44611 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44610 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 44551 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44550 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 44491 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44490 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 44431 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44430 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 44371 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 44370 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 44312 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 44311 aagaatgagccggcgactcatag 44289 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20268 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 20327 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20328 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 20387 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20388 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 20447 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20448 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 20507 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20508 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 20567 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20568 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 20627 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20628 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 20687 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20688 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 20747 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 20748 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 20806 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 20807 aagaatgagccggcgactcatag 20829
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58578 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 58519 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 58518 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 58459 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58458 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 58399 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58398 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 58339 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58338 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 58279 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 58278 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 58219 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58218 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 58159 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58158 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 58099 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58098 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 58040 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 58039 aagaatgagccggcgactcatag 58017
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 1420 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1419 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 1360 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1359 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 1300 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 1240 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 1180 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1179 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 1120 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 1060 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 1000 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 999 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 941 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 940 aagaatgagccggcgactcatag 918
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268193 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 9268252 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9268253 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 9268312 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268313 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 9268372 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268373 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 9268432 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268433 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 9268492 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9268493 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 9268552 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268553 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 9268612 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268613 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 9268672 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268673 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 9268731 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 9268732 aagaatgagccggcgactcatag 9268754 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227693 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 9227752 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9227753 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 9227812 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227813 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 9227872 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227873 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 9227932 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227933 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 9227992 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9227993 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 9228052 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228053 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 9228112 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228113 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 9228172 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9228173 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 9228231 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 9228232 aagaatgagccggcgactcatag 9228254 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164282 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 9164341 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9164342 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 9164401 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164402 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 9164461 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164462 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 9164521 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164522 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 9164581 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9164582 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 9164641 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164642 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 9164701 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164702 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 9164761 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164762 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 9164820 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 9164821 aagaatgagccggcgactcatag 9164843 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056107 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 9056166 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9056167 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 9056226 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056227 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 9056286 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056287 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 9056346 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056347 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 9056406 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9056407 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 9056466 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056467 ctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 9056526 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056527 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 9056586 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056587 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 9056645 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 9056646 aagaatgagccggcgactcatag 9056668 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 406 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 465 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 466 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 511 |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggg 25171408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938178 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 19938237 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19938238 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 19938297 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938298 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 19938357 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938358 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 19938417 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938418 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 19938477 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19938478 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 19938537 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938538 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 19938597 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938598 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 19938657 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938658 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 19938716 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 19938717 aagaatgagccggcgactcatag 19938739 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277253 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 10277194 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10277193 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 10277134 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277133 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 10277074 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277073 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 10277014 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277013 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 10276954 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10276953 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 10276894 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276893 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 10276834 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276833 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 10276774 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10276773 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 10276715 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 10276714 aagaatgagccggcgactcatag 10276692 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387045 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 10387104 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10387105 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 10387164 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387165 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 10387224 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387225 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 10387284 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387285 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 10387344 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10387345 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 10387404 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387405 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 10387464 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10387465 agtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaa 10387524 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387525 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 10387583 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 10387584 aagaatgagccggcgactcatag 10387606 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 424 agtaccgtgagggaaaggtgaaaagaacccc 454 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 ttgtgctgctaggcgaagcggttgagtgc 277 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598360 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 31598419 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31598420 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 31598479 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598480 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 31598539 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598540 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 31598599 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598600 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 31598659 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31598660 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 31598719 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598720 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 31598779 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598780 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 31598839 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598840 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 31598898 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 31598899 aagaatgagccggcgactcatag 31598921
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525676 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 33525735 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33525736 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 33525795 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525796 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 33525855 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525856 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 33525915 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525916 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 33525975 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33525976 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 33526035 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526036 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 33526095 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526096 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 33526155 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33526156 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 33526214 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 33526215 aagaatgagccggcgactcatag 33526237 Score = 238 bits (120), Expect = 2e-59 Identities = 133/136 (97%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 428 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 487 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 488 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 547 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 16677983 Query: 548 agccggcgactcatag 563 |||||||||||||||| Sbjct: 16677982 agccggcgactcatag 16677967 Score = 180 bits (91), Expect = 3e-42 Identities = 107/111 (96%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 442 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 501 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 502 gtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 552 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 435 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 473 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttc 32 |||| ||||| ||||||||||||||||||||| Sbjct: 19455165 gaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47865 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 47806 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 47805 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 47746 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47745 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 47686 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47685 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 47626 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47625 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 47566 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 47565 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 47506 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47505 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 47446 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47445 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 47386 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47385 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 47327 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 47326 aagaatgagccggcgactcatag 47304
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70873 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 70932 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 70933 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 70992 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70993 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 71052 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71053 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 71112 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71113 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 71172 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 71173 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 71232 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71233 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 71292 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71293 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 71352 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 71353 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 71411 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 71412 aagaatgagccggcgactcatag 71434 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123689 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 123630 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123629 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123570 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123569 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123510 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123509 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123450 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123449 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123390 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123389 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 123330 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123329 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 123270 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123269 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 123210 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123209 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 123151 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 123150 aagaatgagccggcgactcatag 123128 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99148 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 99207 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99208 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 99267 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99268 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 99327 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99328 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 99387 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99388 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 99447 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99448 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 99507 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99508 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 99567 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99568 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 99627 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 99628 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 99686 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 99687 aagaatgagccggcgactcatag 99709
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 104 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 164 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 224 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 284 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 344 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 345 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 404 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 464 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 524 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 525 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 583 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 584 aagaatgagccggcgactcatag 606
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 101 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 102 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 161 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 221 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 281 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 341 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 342 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 401 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 461 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 521 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 522 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 580 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 581 aagaatgagccggcgactcatag 603
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949454 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 19949513 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19949514 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 19949573 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949574 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 19949633 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949634 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 19949693 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949694 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 19949753 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19949754 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 19949813 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949814 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 19949873 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949874 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 19949933 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949934 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 19949992 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 19949993 aagaatgagccggcgactcatag 19950015 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283292 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 10283233 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10283232 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 10283173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283172 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 10283113 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283112 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 10283053 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283052 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 10282993 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10282992 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 10282933 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282932 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 10282873 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282872 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 10282813 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10282812 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 10282754 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 10282753 aagaatgagccggcgactcatag 10282731 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393084 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 10393143 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10393144 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 10393203 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393204 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 10393263 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393264 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 10393323 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393324 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 10393383 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10393384 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 10393443 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393444 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 10393503 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10393504 agtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaa 10393563 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393564 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 10393622 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 10393623 aagaatgagccggcgactcatag 10393645 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 ttgtgctgctaggcgaagcggttgagtgc 277 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124406 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 124347 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 124346 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 124287 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124286 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 124227 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124226 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 124167 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124166 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 124107 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 124106 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 124047 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124046 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 123987 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123986 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 123927 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123926 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 123868 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 123867 aagaatgagccggcgactcatag 123845 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99825 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 99884 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99885 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 99944 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99945 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 100004 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100005 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 100064 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100065 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 100124 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100125 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 100184 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100185 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 100244 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100245 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 100304 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100305 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 100363 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 100364 aagaatgagccggcgactcatag 100386
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119833 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119774 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119773 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 119714 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119713 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 119654 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119653 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 119594 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119593 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 119534 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119533 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 119474 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 119414 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119413 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 119354 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119353 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 119295 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 119294 aagaatgagccggcgactcatag 119272 Score = 1084 bits (547), Expect = 0.0 Identities = 560/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95206 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 95265 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95266 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 95325 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95326 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 95385 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95386 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 95445 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95446 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 95505 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95506 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 95565 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95566 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95625 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95626 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 95685 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95686 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 95744 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 95745 aagaatgagccggcgactcatag 95767
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140841 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 140900 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 140901 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 140960 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140961 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 141020 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141021 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 141080 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141081 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 141140 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141141 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 141200 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141201 ctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 141260 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141261 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 141320 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141321 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 141379 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 141380 aagaatgagccggcgactcatag 141402
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93437 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 93496 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 93497 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 93556 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93557 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 93616 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93617 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 93676 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93677 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 93736 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 93737 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 93796 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93797 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 93856 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 93857 agtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaa 93916 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93917 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 93975 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 93976 aagaatgagccggcgactcatag 93998
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1076 bits (543), Expect = 0.0 Identities = 559/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27501 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 27560 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 27561 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 27620 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27621 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 27680 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27681 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 27740 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27741 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 27800 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 27801 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 27860 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27861 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 27920 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27921 agtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaa 27980 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27981 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 28039 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 28040 aagaatgagccggcgactcatag 28062
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1068 bits (539), Expect = 0.0 Identities = 558/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242088 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 9242029 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9242028 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 9241969 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241968 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 9241909 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241908 agtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 9241849 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241848 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 9241789 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9241788 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 9241729 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241728 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 9241669 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241668 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 9241609 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9241608 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 9241550 Query: 541 aagaatgagccggcgactcatag 563 |||||||||| |||||||||||| Sbjct: 9241549 aagaatgagctggcgactcatag 9241527 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 131 actgaaacatcttagtagccagaggaaaagaaag 164 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1068 bits (539), Expect = 0.0 Identities = 558/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53301 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 53242 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 53241 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 53182 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53181 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 53122 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53121 agtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 53062 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53061 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 53002 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 53001 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 52942 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52941 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 52882 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52881 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 52822 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52821 accgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttg 52763 Query: 541 aagaatgagccggcgactcatag 563 |||||||||| |||||||||||| Sbjct: 52762 aagaatgagctggcgactcatag 52740
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1068 bits (539), Expect = 0.0 Identities = 558/563 (99%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 61 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 62 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 121 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 181 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcag 241 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 301 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 302 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 361 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 421 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 481 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 482 accgtgctgagctcccaagcagtggga-ggggaaattgatctctgaccgcgtgcctgttg 540 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcatag 563
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1023 bits (516), Expect = 0.0 Identities = 548/556 (98%), Gaps = 2/556 (0%) Strand = Plus / Minus Query: 8 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123621 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 123562 Query: 68 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 127 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 123561 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 123502 Query: 128 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123501 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 123442 Query: 188 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 247 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123441 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 123382 Query: 248 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 307 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123381 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 123322 Query: 308 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 367 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123321 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 123263 Query: 368 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 123203 Query: 428 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123202 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 123143 Query: 488 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 547 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123142 tgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 123084 Query: 548 agccggcgactcatag 563 |||||||||||||||| Sbjct: 123083 agccggcgactcatag 123068 Score = 1023 bits (516), Expect = 0.0 Identities = 548/556 (98%), Gaps = 2/556 (0%) Strand = Plus / Plus Query: 8 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99116 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 99175 Query: 68 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 127 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 99176 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 99235 Query: 128 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99236 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 99295 Query: 188 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 247 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99296 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 99355 Query: 248 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 307 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99356 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 99415 Query: 308 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 367 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99416 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 99474 Query: 368 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99475 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 99534 Query: 428 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99535 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 99594 Query: 488 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 547 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99595 tgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 99653 Query: 548 agccggcgactcatag 563 |||||||||||||||| Sbjct: 99654 agccggcgactcatag 99669
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1023 bits (516), Expect = 0.0 Identities = 548/556 (98%), Gaps = 2/556 (0%) Strand = Plus / Plus Query: 8 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5469 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 5528 Query: 68 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 127 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 5529 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 5588 Query: 128 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5589 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 5648 Query: 188 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 247 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5649 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 5708 Query: 248 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 307 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5709 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 5768 Query: 308 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 367 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5769 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 5827 Query: 368 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5828 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 5887 Query: 428 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5888 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 5947 Query: 488 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 547 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5948 tgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 6006 Query: 548 agccggcgactcatag 563 |||||||||||||||| Sbjct: 6007 agccggcgactcatag 6022
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1023 bits (516), Expect = 0.0 Identities = 548/556 (98%), Gaps = 2/556 (0%) Strand = Plus / Plus Query: 8 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 116 Query: 68 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 127 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 117 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 176 Query: 128 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 236 Query: 188 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 247 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 237 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 296 Query: 248 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 307 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 297 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 356 Query: 308 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 367 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 415 Query: 368 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 475 Query: 428 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 535 Query: 488 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 547 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 536 tgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 594 Query: 548 agccggcgactcatag 563 |||||||||||||||| Sbjct: 595 agccggcgactcatag 610
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 987 bits (498), Expect = 0.0 Identities = 511/514 (99%), Gaps = 1/514 (0%) Strand = Plus / Plus Query: 50 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 109 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 110 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 170 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 230 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 290 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 349 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 350 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 410 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 470 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccg 529 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccg 479 Query: 530 cgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcatag 513
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 971 bits (490), Expect = 0.0 Identities = 506/510 (99%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 54 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 113 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 174 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 234 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 294 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 353 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 354 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 414 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 474 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtg 533 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtg 479 Query: 534 cctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||| Sbjct: 480 cctgttgaagaatgagccggcgactcatag 509
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 922 bits (465), Expect = 0.0 Identities = 475/477 (99%), Gaps = 1/477 (0%) Strand = Plus / Plus Query: 87 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 147 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 207 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 267 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 326 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 327 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 387 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 447 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 507 agggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 a-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 476
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 918 bits (463), Expect = 0.0 Identities = 469/471 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 165 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 225 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 285 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 345 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 346 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 405 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 465 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 906 bits (457), Expect = 0.0 Identities = 539/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139539 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 139480 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 139479 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 139421 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139420 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 139361 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139360 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 139301 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||| Sbjct: 139300 tacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtcc 139241 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 139240 agtagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatc 139181 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139180 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 139121 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 139120 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 139061 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 139060 accg---tgagctcccaagcagtggga-ggagaatttgatctctgaccgcgtgcctgttg 139005 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 139004 aagaatgagccggcgactcatag 138982 Score = 906 bits (457), Expect = 0.0 Identities = 539/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110406 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 110465 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 110466 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 110524 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110525 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 110584 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110585 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 110644 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||| Sbjct: 110645 tacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtcc 110704 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 110705 agtagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatc 110764 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110765 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 110824 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 110825 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 110884 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 110885 accg---tgagctcccaagcagtggga-ggagaatttgatctctgaccgcgtgcctgttg 110940 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 110941 aagaatgagccggcgactcatag 110963
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 906 bits (457), Expect = 0.0 Identities = 539/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127817 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 127758 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 127757 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 127699 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127698 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 127639 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127638 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 127579 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 127578 tacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 127519 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 127518 agtagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 127459 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127458 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 127399 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 127398 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 127339 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 127338 accg---tgagctcccaagcagtggga-ggagaatgtgatctctgaccgcgtgcctgttg 127283 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 127282 aagaatgagccggcgactcatag 127260 Score = 906 bits (457), Expect = 0.0 Identities = 539/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107105 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 107164 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 107165 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 107223 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107224 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 107283 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107284 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 107343 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 107344 tacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 107403 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107404 agtagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 107463 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107464 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 107523 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 107524 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 107583 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 107584 accg---tgagctcccaagcagtggga-ggagaatgtgatctctgaccgcgtgcctgttg 107639 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 107640 aagaatgagccggcgactcatag 107662
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 906 bits (457), Expect = 0.0 Identities = 539/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134176 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 134117 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 134116 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 134058 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134057 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 133998 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133997 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 133938 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||| Sbjct: 133937 tacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtcc 133878 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133877 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 133818 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133817 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 133758 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 133757 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 133698 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 133697 accg---taagctcccaagcagtggga-ggagaatgtgatctctgaccgcgtgcctgttg 133642 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 133641 aagaatgagccggcgactcatag 133619 Score = 906 bits (457), Expect = 0.0 Identities = 539/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103795 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 103854 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 103855 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 103913 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103914 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 103973 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103974 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 104033 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||| Sbjct: 104034 tacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtcc 104093 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104094 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 104153 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104154 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 104213 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 104214 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 104273 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 104274 accg---taagctcccaagcagtggga-ggagaatgtgatctctgaccgcgtgcctgttg 104329 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 104330 aagaatgagccggcgactcatag 104352
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 890 bits (449), Expect = 0.0 Identities = 537/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142061 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 142002 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 142001 agattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 141943 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141942 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 141883 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141882 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 141823 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||| Sbjct: 141822 tacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtcc 141763 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 141762 agtaaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatc 141703 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141702 ccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcga 141643 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 141642 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 141583 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 141582 accg---tgagctcccaagcagtggga-ggagaatttgatctctgaccgcgtgcctgttg 141527 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 141526 aagaatgagccggcgactcatag 141504 Score = 890 bits (449), Expect = 0.0 Identities = 537/563 (95%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111596 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 111655 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 111656 agattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 111714 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111715 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 111774 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111775 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 111834 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||| Sbjct: 111835 tacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtcc 111894 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 111895 agtaaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatc 111954 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 111955 ccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcga 112014 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 112015 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 112074 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 112075 accg---tgagctcccaagcagtggga-ggagaatttgatctctgaccgcgtgcctgttg 112130 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 112131 aagaatgagccggcgactcatag 112153
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 882 bits (445), Expect = 0.0 Identities = 535/563 (95%), Gaps = 9/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134934 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 134875 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 134874 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 134816 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134815 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 134756 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134755 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 134696 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 134695 tacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtcc 134636 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| Sbjct: 134635 agtagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatc 134576 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134575 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 134516 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 134515 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 134456 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 134455 accg---tgagctcccaagcagtgggagg-----agaaatctctgaccgcgtgcctgttg 134404 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 134403 aagaatgagccggcgactcatag 134381 Score = 882 bits (445), Expect = 0.0 Identities = 535/563 (95%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105348 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105407 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 105408 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 105466 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105467 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 105526 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105527 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 105586 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 105587 tacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtcc 105646 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| Sbjct: 105647 agtagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatc 105706 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105707 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 105766 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 105767 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 105826 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 105827 accg---tgagctcccaagcagtgggagg-----agaaatctctgaccgcgtgcctgttg 105878 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 105879 aagaatgagccggcgactcatag 105901
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 878 bits (443), Expect = 0.0 Identities = 535/563 (95%), Gaps = 7/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136544 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 136485 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 136484 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 136426 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136425 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 136366 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136365 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 136306 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 136305 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 136246 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 136245 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 136186 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136185 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 136126 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 136125 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 136066 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 136065 accg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgttg 136012 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 136011 aagaatgagccggcgactcatag 135989 Score = 878 bits (443), Expect = 0.0 Identities = 535/563 (95%), Gaps = 7/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105881 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105940 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 105941 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 105999 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106000 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106059 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106060 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106119 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 106120 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 106179 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106180 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 106239 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 106299 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 106300 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 106359 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 106360 accg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgttg 106413 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 106414 aagaatgagccggcgactcatag 106436
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 868 bits (438), Expect = 0.0 Identities = 534/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132728 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 132669 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 132668 agattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 132610 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132609 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 132550 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132549 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 132490 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 132489 tacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtcc 132430 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132429 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 132370 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132369 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 132310 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 132309 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 132250 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 132249 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 132195 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 132194 aagaatgagccggcgactcatag 132172 Score = 868 bits (438), Expect = 0.0 Identities = 534/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104150 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 104209 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 104210 agattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 104268 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104269 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 104328 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104329 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 104388 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 104389 tacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtcc 104448 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104449 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 104508 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104509 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 104568 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 104569 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 104628 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 104629 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 104683 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 104684 aagaatgagccggcgactcatag 104706
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 868 bits (438), Expect = 0.0 Identities = 534/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132951 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 132892 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 132891 agattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagac 132833 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132832 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 132773 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132772 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 132713 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 132712 taaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 132653 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132652 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 132593 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132592 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 132533 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 132532 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 132473 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 132472 accg---taagctcccaagcagtgggaggag--ccctgggctctgaccgcgtgcctgttg 132418 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 132417 aagaatgagccggcgactcatag 132395 Score = 868 bits (438), Expect = 0.0 Identities = 534/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103813 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 103872 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 103873 agattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagac 103931 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103932 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 103991 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103992 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 104051 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 104052 taaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 104111 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104112 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 104171 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104172 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 104231 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 104232 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 104291 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 104292 accg---taagctcccaagcagtgggaggag--ccctgggctctgaccgcgtgcctgttg 104346 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 104347 aagaatgagccggcgactcatag 104369
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 868 bits (438), Expect = 0.0 Identities = 534/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132721 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 132662 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 132661 agattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 132603 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132602 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 132543 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132542 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 132483 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 132482 tacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtcc 132423 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132422 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 132363 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132362 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 132303 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 132302 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 132243 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 132242 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 132188 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 132187 aagaatgagccggcgactcatag 132165 Score = 868 bits (438), Expect = 0.0 Identities = 534/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104148 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 104207 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 104208 agattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 104266 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104267 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 104326 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 104386 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 104387 tacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtcc 104446 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104447 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 104506 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104507 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 104566 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 104567 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 104626 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 104627 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 104681 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 104682 aagaatgagccggcgactcatag 104704
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 860 bits (434), Expect = 0.0 Identities = 533/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131620 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 131561 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 131560 agattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 131502 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131501 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 131442 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131441 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 131382 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 131381 tacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtcc 131322 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131321 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 131262 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131261 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 131202 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 131201 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 131142 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 131141 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 131087 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 131086 aagaatgagccggcgactcatag 131064 Score = 860 bits (434), Expect = 0.0 Identities = 533/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103015 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 103074 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 103075 agattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 103133 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103134 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 103193 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103194 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 103253 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 103254 tacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtcc 103313 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103314 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 103373 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103374 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 103433 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 103434 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 103493 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 103494 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 103548 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 103549 aagaatgagccggcgactcatag 103571
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 860 bits (434), Expect = 0.0 Identities = 533/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 133912 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 133853 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 133852 agattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagac 133794 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133793 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 133734 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133733 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 133674 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 133673 aaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 133614 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133613 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 133554 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133553 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 133494 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 133493 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 133434 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 133433 accg---taagctcccaagcagtgggaggag--ccctgggctctgaccgcgtgcctgttg 133379 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 133378 aagaatgagccggcgactcatag 133356 Score = 860 bits (434), Expect = 0.0 Identities = 533/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104737 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 104796 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 104797 agattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagac 104855 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104856 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 104915 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104916 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 104975 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 104976 aaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 105035 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105036 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 105095 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105096 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 105155 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 105156 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 105215 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 105216 accg---taagctcccaagcagtgggaggag--ccctgggctctgaccgcgtgcctgttg 105270 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 105271 aagaatgagccggcgactcatag 105293
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 852 bits (430), Expect = 0.0 Identities = 532/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140313 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 140254 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 140253 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 140195 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140194 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 140135 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140134 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 140075 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||| Sbjct: 140074 tacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtcc 140015 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 140014 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 139955 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139954 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 139895 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 139894 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 139835 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | || ||||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 139834 accg---taagttcccaagcagtgggaggag--acgggggctctgaccgcgtgcctgttg 139780 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 139779 aagaatgagccggcgactcatag 139757 Score = 852 bits (430), Expect = 0.0 Identities = 532/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109747 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 109806 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 109807 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 109865 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109866 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 109925 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109926 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 109985 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||| Sbjct: 109986 tacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtcc 110045 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110046 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 110105 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110106 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 110165 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 110166 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 110225 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | || ||||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 110226 accg---taagttcccaagcagtgggaggag--acgggggctctgaccgcgtgcctgttg 110280 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 110281 aagaatgagccggcgactcatag 110303
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 852 bits (430), Expect = 0.0 Identities = 532/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 105 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 106 agattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagac 164 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 224 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 284 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 285 aaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 344 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 agtagccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 404 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 464 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 465 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 524 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 525 accg---taagctcccaagcagtgggaggag--ccctgggctctgaccgcgtgcctgttg 579 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 580 aagaatgagccggcgactcatag 602
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 852 bits (430), Expect = 0.0 Identities = 532/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 55 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || |||||| |||||||||||||| | ||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 474 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 534 accg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgttg 588 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 589 aagaatgagccggcgactcatag 611
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 837 bits (422), Expect = 0.0 Identities = 530/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106052 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccgg 106111 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 106112 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 106170 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106171 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106230 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106231 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106290 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||| Sbjct: 106291 tacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtcc 106350 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106351 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 106410 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106411 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 106470 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 106471 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 106530 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 106531 accg---taagcttccaagcagtgggaggag--acgaggactctgaccgcgtgcctgttg 106585 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 106586 aagaatgagccggcgactcatag 106608 Score = 787 bits (397), Expect = 0.0 Identities = 529/566 (93%), Gaps = 9/566 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 135857 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccgg 135798 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 135797 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 135739 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135738 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135679 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-a 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135678 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135619 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 299 |||||||||| ||||||||||||||||| || ||||| |||||||||||||| | |||| Sbjct: 135618 atacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtc 135559 Query: 300 cagtagccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaa 358 |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| Sbjct: 135558 cagtagccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaa 135499 Query: 359 tcccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgatag 417 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135498 tcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 135439 Query: 418 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 477 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 135438 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 135379 Query: 478 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctg 537 ||||||| | |||| ||||||||||||||| | | | | ||||||||||||||||| Sbjct: 135378 gaaaccg---taagcttccaagcagtgggaggag--acgaggactctgaccgcgtgcctg 135324 Query: 538 ttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||| Sbjct: 135323 ttgaagaatgagccggcgactcatag 135298
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 837 bits (422), Expect = 0.0 Identities = 531/563 (94%), Gaps = 7/563 (1%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46302 gaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 46361 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||| Sbjct: 46362 ttcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaac 46420 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 46421 ctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtagt 46480 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 46481 agcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaatac 46540 Query: 244 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 303 |||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 46541 aagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccagt 46600 Query: 304 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46601 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 46660 Query: 364 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46661 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 46720 Query: 424 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 483 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 46721 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 46780 Query: 484 gtgctgagctcccaagcagtgggagg-gggaaagtg--atctctgaccgcgtgcctgttg 540 | | ||||| |||||||||||||| || ||| | |||||||||||||||||||| Sbjct: 46781 g---taagctctcaagcagtgggaggaggcgccgtggaagctctgaccgcgtgcctgttg 46837 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 46838 aagaatgagccggcgactcatag 46860
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 837 bits (422), Expect = 0.0 Identities = 530/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 136133 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccgg 136074 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 136073 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 136015 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136014 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135955 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135954 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135895 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||| Sbjct: 135894 tacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtcc 135835 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135834 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 135775 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135774 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 135715 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 135714 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 135655 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 135654 accg---taagcttccaagcagtgggaggag--acgaggactctgaccgcgtgcctgttg 135600 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 135599 aagaatgagccggcgactcatag 135577 Score = 837 bits (422), Expect = 0.0 Identities = 530/563 (94%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106274 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccgg 106333 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 106334 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 106392 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106393 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106452 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106453 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106512 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||| Sbjct: 106513 tacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtcc 106572 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106573 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 106632 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106633 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 106692 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 106693 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 106752 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 106753 accg---taagcttccaagcagtgggaggag--acgaggactctgaccgcgtgcctgttg 106807 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 106808 aagaatgagccggcgactcatag 106830
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136253 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 136194 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 136193 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 136135 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136134 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 136075 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136074 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 136015 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 136014 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 135955 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135954 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 135895 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135894 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135835 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135834 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135775 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135774 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 135721 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 135720 gaagaatgagccggcgactcatag 135697 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106377 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 106436 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 106437 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 106495 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106555 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106556 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106615 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 106616 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 106675 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106676 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 106735 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106736 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106795 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106796 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106855 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106856 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106909 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106910 gaagaatgagccggcgactcatag 106933
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136891 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 136832 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 136831 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 136773 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136772 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 136713 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136712 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 136653 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 136652 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 136593 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 136592 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 136533 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136532 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 136473 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 136472 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 136413 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 136412 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 136359 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 136358 gaagaatgagccggcgactcatag 136335 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106666 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 106725 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 106726 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 106784 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106785 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106844 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106904 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 106905 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 106964 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106965 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 107024 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107025 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 107084 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 107085 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 107144 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 107145 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 107198 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 107199 gaagaatgagccggcgactcatag 107222
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1571 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 1630 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 1631 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 1689 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1690 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 1749 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1750 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 1809 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 1810 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 1869 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1870 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 1929 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1930 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 1989 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 1990 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 2049 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 2050 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 2103 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 2104 gaagaatgagccggcgactcatag 2127
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135499 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 135440 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 135439 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 135381 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135380 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135321 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135320 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135261 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 135260 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 135201 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135200 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 135141 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135140 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135081 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135080 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135021 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135020 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 134967 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 134966 gaagaatgagccggcgactcatag 134943 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105537 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105596 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 105597 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 105655 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105656 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 105715 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105716 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 105775 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 105776 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 105835 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105836 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 105895 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105896 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 105955 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 105956 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106015 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106016 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106069 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106070 gaagaatgagccggcgactcatag 106093
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135634 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 135575 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 135574 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 135516 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135515 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135456 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135455 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135396 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 135395 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 135336 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135335 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 135276 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135275 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135216 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135215 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135156 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135155 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 135102 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 135101 gaagaatgagccggcgactcatag 135078 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105709 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105768 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 105769 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 105827 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105828 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 105887 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105888 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 105947 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 105948 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 106007 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106008 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 106067 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106068 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106127 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106128 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106187 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106188 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106241 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106242 gaagaatgagccggcgactcatag 106265
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135632 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 135573 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 135572 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 135514 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135513 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135454 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135453 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135394 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 135393 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 135334 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135333 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 135274 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135273 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135214 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135213 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135154 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135153 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 135100 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 135099 gaagaatgagccggcgactcatag 135076 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105706 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105765 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 105766 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 105824 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105825 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 105884 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105885 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 105944 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 105945 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 106004 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106005 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 106064 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106065 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106124 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106125 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106184 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106185 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106238 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106239 gaagaatgagccggcgactcatag 106262
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135544 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 135485 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 135484 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 135426 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135425 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135366 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135365 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135306 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 135305 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 135246 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135245 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 135186 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135185 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135126 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135125 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135066 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135065 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 135012 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 135011 gaagaatgagccggcgactcatag 134988 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105584 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105643 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 105644 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 105702 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105703 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 105762 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105763 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 105822 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 105823 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 105882 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105883 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 105942 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105943 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106002 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106003 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106062 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106063 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106116 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106117 gaagaatgagccggcgactcatag 106140
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136251 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 136192 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 136191 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 136133 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136132 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 136073 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136072 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 136013 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 136012 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 135953 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135952 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 135893 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135892 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135833 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135832 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135773 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135772 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 135719 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 135718 gaagaatgagccggcgactcatag 135695 Score = 833 bits (420), Expect = 0.0 Identities = 531/564 (94%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106375 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 106434 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 106435 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 106493 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106494 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106553 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106554 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106613 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 106614 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 106673 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106674 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 106733 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106734 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106793 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106794 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106853 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106854 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106907 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106908 gaagaatgagccggcgactcatag 106931
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 831 bits (419), Expect = 0.0 Identities = 531/564 (94%), Gaps = 7/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 47 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 106 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 107 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 165 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 aacctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 225 Query: 181 agtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 agtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 285 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 299 |||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 286 atacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtc 345 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 346 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 405 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 406 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 465 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 466 aagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatga 525 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 526 aaccg---taagctcccaagcagtgggaggagcctgggg--ctctgaccgcgtgcctgtt 580 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 581 gaagaatgagccggcgactcatag 604
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 829 bits (418), Expect = 0.0 Identities = 529/563 (93%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139457 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 139398 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||| Sbjct: 139397 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagac 139339 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139338 aacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgt 139279 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139278 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 139219 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 139218 taaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtcc 139159 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 139158 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 139099 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139098 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 139039 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||| Sbjct: 139038 agtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaa 138979 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 138978 accg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttg 138924 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 138923 aagaatgagccggcgactcatag 138901 Score = 829 bits (418), Expect = 0.0 Identities = 529/563 (93%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 109640 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 109699 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||| Sbjct: 109700 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagac 109758 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109759 aacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgt 109818 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109819 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 109878 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 109879 taaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtcc 109938 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 109939 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 109998 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109999 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 110058 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||| Sbjct: 110059 agtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaa 110118 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | |||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 110119 accg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttg 110173 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 110174 aagaatgagccggcgactcatag 110196
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 42 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 101 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 102 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 162 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 222 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 282 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 341 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 342 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 402 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 462 tagtga 467 |||||| Sbjct: 421 tagtga 426
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 827 bits (417), Expect = 0.0 Identities = 529/563 (93%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 48 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccgg 107 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||| ||| |||||||| |||||| |||||||| ||| ||||||||||||| Sbjct: 108 agattcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagagac 166 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 226 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 227 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 286 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || ||| |||||| ||||||||||||||||||||| |||||||| |||||| | ||||| Sbjct: 287 tataagtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtcc 346 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 347 agtagccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatc 406 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 466 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 467 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 526 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 527 accgta---agctcccaagcagtgggaggagaatcg-gatctctgaccgcgtgcctgttg 582 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 583 aagaatgagccggcgacttatag 605
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 825 bits (416), Expect = 0.0 Identities = 530/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135982 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 135923 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 135922 ggattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 135864 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135863 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135804 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135803 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135744 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 135743 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 135684 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135683 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 135624 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135623 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135564 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135563 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135504 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135503 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 135450 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 135449 gaagaatgagccggcgactcatag 135426 Score = 825 bits (416), Expect = 0.0 Identities = 530/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106156 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 106215 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 106216 ggattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 106274 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106275 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 106334 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106335 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 106394 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 106395 tacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 106454 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 106514 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106515 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106574 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106575 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106634 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106635 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106688 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 106689 gaagaatgagccggcgactcatag 106712
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 825 bits (416), Expect = 0.0 Identities = 530/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135511 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 135452 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 135451 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 135393 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135392 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 135333 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135332 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 135273 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 135272 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 135213 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135212 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 135153 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135152 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 135093 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135092 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135033 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 135032 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 134979 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 134978 gaagaatgagccggcgactaatag 134955 Score = 825 bits (416), Expect = 0.0 Identities = 530/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105551 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 105610 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 105611 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 105669 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105670 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 105729 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105730 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 105789 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||| Sbjct: 105790 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtc 105849 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105850 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 105909 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105910 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 105969 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 105970 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106029 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 106030 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 106083 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 106084 gaagaatgagccggcgactaatag 106107
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 819 bits (413), Expect = 0.0 Identities = 529/563 (93%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131744 gaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccgg 131685 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 131684 agattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagac 131626 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131625 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 131566 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131565 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 131506 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||| Sbjct: 131505 tacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtcc 131446 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131445 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 131386 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131385 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 131326 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 131325 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 131266 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | ||||| ||||||||||||||||| | || | |||||||||||||||||| Sbjct: 131265 accg---taagctctcaagcagtgggaggggg-accaga-ccctgaccgcgtgcctgttg 131211 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 131210 aagaatgagccggcgactcatag 131188 Score = 819 bits (413), Expect = 0.0 Identities = 529/563 (93%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 101701 gaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccgg 101760 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 101761 agattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagac 101819 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101820 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 101879 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101880 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 101939 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||| Sbjct: 101940 tacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtcc 101999 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102000 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 102059 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102060 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 102119 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 102120 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 102179 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | ||||| ||||||||||||||||| | || | |||||||||||||||||| Sbjct: 102180 accg---taagctctcaagcagtgggaggggg-accaga-ccctgaccgcgtgcctgttg 102234 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 102235 aagaatgagccggcgactcatag 102257
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 815 bits (411), Expect = 0.0 Identities = 486/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130488 gaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 130429 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 130428 agattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagac 130370 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130369 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 130310 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130309 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcta 130250 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 130249 tacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 130190 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130189 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 130130 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130129 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 130070 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 130069 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 130010 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 130009 accg---taagctcccaagcagtgggagg 129984 Score = 815 bits (411), Expect = 0.0 Identities = 486/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101968 gaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 102027 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 102028 agattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagac 102086 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102087 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 102146 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 102147 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcta 102206 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct: 102207 tacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtcc 102266 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102267 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 102326 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102327 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 102386 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 102387 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 102446 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 102447 accg---taagctcccaagcagtgggagg 102472 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Minus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 129927 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 102529
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 815 bits (411), Expect = 0.0 Identities = 530/565 (93%), Gaps = 6/565 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139666 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 139607 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 139606 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 139548 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139547 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 139488 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139487 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 139428 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| || || ||| ||||||||||||| | |||| Sbjct: 139427 tacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtc 139368 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139367 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 139308 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139307 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcg 139248 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 139247 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 139188 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagt-gatctctgaccgcgtgcctgt 538 ||||| | |||||||||||||||||||| | | | | |||||||||||||||||| Sbjct: 139187 aaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgt 139131 Query: 539 tgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||| Sbjct: 139130 tgaagaatgagccggcgactcatag 139106 Score = 815 bits (411), Expect = 0.0 Identities = 530/565 (93%), Gaps = 6/565 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 109633 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 109692 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 109693 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 109751 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109752 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 109811 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109812 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 109871 Query: 241 tacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| || || ||| ||||||||||||| | |||| Sbjct: 109872 tacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtc 109931 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109932 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 109991 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 109992 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcg 110051 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 110052 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 110111 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagt-gatctctgaccgcgtgcctgt 538 ||||| | |||||||||||||||||||| | | | | |||||||||||||||||| Sbjct: 110112 aaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgt 110168 Query: 539 tgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||| Sbjct: 110169 tgaagaatgagccggcgactcatag 110193
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 809 bits (408), Expect = 0.0 Identities = 529/564 (93%), Gaps = 9/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 81 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 82 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 140 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 200 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 260 Query: 241 tacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||| Sbjct: 261 tacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtc 319 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 320 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 379 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 439 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 440 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 499 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 500 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 553 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 554 gaagaatgagccggcgactcatag 577
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 807 bits (407), Expect = 0.0 Identities = 485/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 55 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||| Sbjct: 474 agtactaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 534 accg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 807 bits (407), Expect = 0.0 Identities = 485/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 55 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||| ||||||||||||| ||||||||||||||||| || ||||||||||||| |||| Sbjct: 474 agtactaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 534 accg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcatag 623
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 799 bits (403), Expect = 0.0 Identities = 484/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 55 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||| ||||||||||||| ||||||||||||||||| || ||||||||||||| |||| Sbjct: 474 agtaataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 534 accg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatga 548 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 799 bits (403), Expect = 0.0 Identities = 484/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 55 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||| Sbjct: 474 agtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 534 accg---taagctcccaagcagtgggagg 559 Score = 46.1 bits (23), Expect = 0.12 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||| || |||||||| ||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcatag 622
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 799 bits (403), Expect = 0.0 Identities = 484/509 (95%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 55 gaggaagggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 474 agtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | |||||||||||||||||||| Sbjct: 534 accg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 41/43 (95%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcatag 622
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 793 bits (400), Expect = 0.0 Identities = 513/548 (93%), Gaps = 6/548 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 155 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||| Sbjct: 156 agattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagac 214 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 215 aacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgt 274 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 334 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 335 taaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtcc 394 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 395 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 454 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 514 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||| Sbjct: 515 agtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaa 574 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | ||||||||||||| |||||| | || | |||||||||||||||||||| Sbjct: 575 accg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttg 629 Query: 541 aagaatga 548 |||||||| Sbjct: 630 aagaatga 637
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 785 bits (396), Expect = 0.0 Identities = 525/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 142832 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccgg 142773 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 142772 agattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 142714 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142713 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 142654 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 142653 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtca 142594 Query: 241 tacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||| Sbjct: 142593 tacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtc 142534 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 142533 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 142474 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142473 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcg 142414 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 142413 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 142354 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | ||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 142353 aaccg---taggctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 142300 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 142299 gaagaatgagccggcgactcatag 142276 Score = 785 bits (396), Expect = 0.0 Identities = 525/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110496 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccgg 110555 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 110556 agattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 110614 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110615 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 110674 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110675 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtca 110734 Query: 241 tacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtc 299 ||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||| Sbjct: 110735 tacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtc 110794 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110795 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 110854 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110855 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcg 110914 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 110915 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 110974 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | ||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 110975 aaccg---taggctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 111028 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 111029 gaagaatgagccggcgactcatag 111052
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 783 bits (395), Expect = 0.0 Identities = 523/563 (92%), Gaps = 7/563 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4278 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccga 4337 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||| Sbjct: 4338 ggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagac 4396 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4397 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 4456 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4457 agtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaa 4516 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||| ||||||||||||| | || || ||||||||||||| ||||||| Sbjct: 4517 tacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtcc 4576 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4577 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 4636 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4637 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 4696 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 4697 agtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaa 4756 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 4757 accgta---agctcccaagcagtggga---ggagctggggctctgaccgcgtgcctgttg 4810 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 4811 aagaatgagccggcgactcatag 4833
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 783 bits (395), Expect = 0.0 Identities = 523/563 (92%), Gaps = 7/563 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23647 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccga 23588 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||| Sbjct: 23587 ggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagac 23529 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23528 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 23469 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 23468 agtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaa 23409 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||| ||||||||||||| | || || ||||||||||||| ||||||| Sbjct: 23408 tacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtcc 23349 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23348 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 23289 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 23288 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 23229 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 23228 agtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaa 23169 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 23168 accgta---agctcccaagcagtggga---ggagctggggctctgaccgcgtgcctgttg 23115 Query: 541 aagaatgagccggcgactcatag 563 ||||||||||||||||||||||| Sbjct: 23114 aagaatgagccggcgactcatag 23092
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 781 bits (394), Expect = 0.0 Identities = 527/566 (93%), Gaps = 9/566 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 86309 gaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaatgagcatagatccgg 86368 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||| ||| |||||| ||||||||||||| ||||||||||||| Sbjct: 86369 agattcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagagac 86427 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 86428 aacctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgt 86487 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-- 238 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86488 agtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagccc 86547 Query: 239 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 298 |||| |||| |||||||||||||||||||||||||| | ||||||||||||| | ||| Sbjct: 86548 aatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagt 86607 Query: 299 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 358 ||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| Sbjct: 86608 ccagtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaa 86667 Query: 359 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86668 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 86727 Query: 419 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 478 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 86728 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 86787 Query: 479 aaaccgtgctgagctcccaagcagtgggagggggaaagt-gatctctgaccgcgtgcctg 537 |||||| | |||||||||||||||||| || ||| | |||||||||||||||||||| Sbjct: 86788 aaaccg---taagctcccaagcagtggga--ggaaaattagatctctgaccgcgtgcctg 86842 Query: 538 ttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||| |||| Sbjct: 86843 ttgaagaatgagccggcgacttatag 86868
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 781 bits (394), Expect = 0.0 Identities = 527/566 (93%), Gaps = 9/566 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 88395 gaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaattagcatagatccgg 88454 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||| Sbjct: 88455 agattcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagagac 88513 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 88514 aacctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgt 88573 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca- 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88574 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcac 88633 Query: 240 -atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 298 ||| |||| |||||||||||||||||||||||||| | ||||||||||||| | ||| Sbjct: 88634 aatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagt 88693 Query: 299 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 358 ||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| Sbjct: 88694 ccagtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaa 88753 Query: 359 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88754 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 88813 Query: 419 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 478 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 88814 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 88873 Query: 479 aaaccgtgctgagctcccaagcagtgggagggggaaagt-gatctctgaccgcgtgcctg 537 |||||| | |||||||||||||||||| || ||| | |||||||||||||||||||| Sbjct: 88874 aaaccg---taagctcccaagcagtggga--ggaaaattagatctctgaccgcgtgcctg 88928 Query: 538 ttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||| |||| Sbjct: 88929 ttgaagaatgagccggcgacttatag 88954
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 779 bits (393), Expect = 0.0 Identities = 527/566 (93%), Gaps = 8/566 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131824 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 131765 Query: 61 agattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119 ||||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||| Sbjct: 131764 ggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagaga 131706 Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131705 caacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 131646 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131645 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagct 131586 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaag 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | || Sbjct: 131585 atacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagag 131526 Query: 298 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 357 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131525 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 131466 Query: 358 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131465 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 131406 Query: 418 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 477 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 131405 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 131346 Query: 478 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctg 537 ||||||| | |||||||||||||||||||| || | || ||||||||||||||||| Sbjct: 131345 gaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctg 131290 Query: 538 ttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||| Sbjct: 131289 ttgaagaatgagccggcgactcatag 131264 Score = 779 bits (393), Expect = 0.0 Identities = 527/566 (93%), Gaps = 8/566 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103570 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 103629 Query: 61 agattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119 ||||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||| Sbjct: 103630 ggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagaga 103688 Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103689 caacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 103748 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103749 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagct 103808 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaag 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | || Sbjct: 103809 atacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagag 103868 Query: 298 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 357 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103869 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 103928 Query: 358 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103929 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 103988 Query: 418 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 477 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 103989 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 104048 Query: 478 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctg 537 ||||||| | |||||||||||||||||||| || | || ||||||||||||||||| Sbjct: 104049 gaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctg 104104 Query: 538 ttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||| Sbjct: 104105 ttgaagaatgagccggcgactcatag 104130
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 777 bits (392), Expect = 0.0 Identities = 402/404 (99%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 160 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 220 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 280 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 339 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 340 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 400 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 460 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 519 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtga 359 Query: 520 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 403
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 773 bits (390), Expect = 0.0 Identities = 528/566 (93%), Gaps = 11/566 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1814 gaggaagggcgtagtaatc-acgaaatgcttcggggagttgaaaataagcatagatccgg 1872 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 1873 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 1931 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag-cgattcccg 179 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1932 aacctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaaaggcgattcccg 1991 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1992 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 2051 Query: 240 atacaagc-gttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaag 297 |||||||| | ||||||||||||||||| | || ||| |||||||||||||| |||| Sbjct: 2052 atacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaag 2111 Query: 298 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2112 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 2171 Query: 358 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2172 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 2231 Query: 418 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 477 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 2232 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 2291 Query: 478 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctg 537 ||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 2292 gaaaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctg 2345 Query: 538 ttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||| Sbjct: 2346 ttgaagaatgagccggcgactcatag 2371
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 773 bits (390), Expect = 0.0 Identities = 400/402 (99%), Gaps = 1/402 (0%) Strand = Plus / Plus Query: 162 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 222 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 282 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 341 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 342 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 402 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 462 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 521 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 401
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 773 bits (390), Expect = 0.0 Identities = 400/402 (99%), Gaps = 1/402 (0%) Strand = Plus / Plus Query: 162 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 222 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 282 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 341 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 342 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 402 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 462 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 521 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 401
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 771 bits (389), Expect = 0.0 Identities = 523/564 (92%), Gaps = 9/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 543 gaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccgg 602 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 603 agattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagac 661 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 721 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 781 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||| Sbjct: 782 tacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtcc 841 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 842 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 901 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 902 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcca 961 Query: 421 agtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 | ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 962 aatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 1021 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | ||||| |||||||||||||| | | | ||||||||||||||||||| Sbjct: 1022 aaccg---taagctctcaagcagtgggaggagacagg----ctctgaccgcgtgcctgtt 1074 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 1075 gaagaatgagccggcgactcatag 1098
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 771 bits (389), Expect = 0.0 Identities = 399/401 (99%), Gaps = 1/401 (0%) Strand = Plus / Plus Query: 163 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 223 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 283 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 342 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 343 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 403 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 463 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 522 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 359 Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 400
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 771 bits (389), Expect = 0.0 Identities = 399/401 (99%), Gaps = 1/401 (0%) Strand = Plus / Plus Query: 163 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 223 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 283 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 342 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 343 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 403 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 463 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 522 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 362 Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 403
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 767 bits (387), Expect = 0.0 Identities = 397/399 (99%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 165 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 225 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 285 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 344 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 345 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 405 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 465 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctct 524 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctct 359 Query: 525 gaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgcgtgcctgttgaagaatgagccggcgactcatag 398
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 765 bits (386), Expect = 0.0 Identities = 527/565 (93%), Gaps = 13/565 (2%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 206 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 207 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagac 265 Query: 121 aacctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattcccg 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 266 aacctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattcccg 325 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 326 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagca 384 Query: 240 atacaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaaagt 298 |||||||||| |||||||||||||||| || || ||| |||||||||||||| ||||| Sbjct: 385 atacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagt 444 Query: 299 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 504 Query: 359 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 418 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 tcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 564 Query: 419 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 478 |||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||| || Sbjct: 565 gaagtagtaccgtgagggaagggtgaaaagaacccc-atcggggagtgaaatagaacatg 623 Query: 479 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 538 ||||||| ||||||||||||||||||| | || | |||||||||||||||||| Sbjct: 624 aaaccgta---agctcccaagcagtgggag---gccaggg--ctctgaccgcgtgcctgt 675 Query: 539 tgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||| Sbjct: 676 tgaagaatgagccggcgactcatag 700
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 759 bits (383), Expect = 0.0 Identities = 519/562 (92%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 55 gaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||| Sbjct: 474 agtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaa 533 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 |||| | ||||| |||||||||||||| | | | |||||| ||||||||||||| Sbjct: 534 accg---taagctctcaagcagtgggaggagacagg----ctctgaacgcgtgcctgttg 586 Query: 541 aagaatgagccggcgactcata 562 || ||||||||||||||||||| Sbjct: 587 aaaaatgagccggcgactcata 608
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 755 bits (381), Expect = 0.0 Identities = 460/485 (94%), Gaps = 1/485 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4547 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccga 4606 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||| Sbjct: 4607 ggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagac 4665 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4666 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 4725 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4726 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 4785 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || || ||||||||||||| ||||||| Sbjct: 4786 tacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtcc 4845 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 4846 agtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatc 4905 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4906 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 4965 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||| Sbjct: 4966 agtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaa 5025 Query: 481 accgt 485 ||||| Sbjct: 5026 accgt 5030 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 5101
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 755 bits (381), Expect = 0.0 Identities = 460/485 (94%), Gaps = 1/485 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4547 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccga 4606 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||| Sbjct: 4607 ggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagac 4665 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4666 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 4725 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4726 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 4785 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||| || || || ||||||||||||| ||||||| Sbjct: 4786 tacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtcc 4845 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 4846 agtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatc 4905 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4906 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtga 4965 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||| Sbjct: 4966 agtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaa 5025 Query: 481 accgt 485 ||||| Sbjct: 5026 accgt 5030 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 5101
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 745 bits (376), Expect = 0.0 Identities = 520/564 (92%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52639 gaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 52580 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 52579 agattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagagat 52521 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 52520 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 52461 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52460 agtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaa 52401 Query: 241 tacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtc 299 || ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||| Sbjct: 52400 taaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtc 52341 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 52340 cagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaat 52281 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52280 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagtt 52221 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||| Sbjct: 52220 aagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatga 52161 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 52160 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 52107 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 52106 gaagaatgagccggcgactcatag 52083 Score = 745 bits (376), Expect = 0.0 Identities = 520/564 (92%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37189 gaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 37248 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 37249 agattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagagat 37307 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 37308 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 37367 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 37368 agtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaa 37427 Query: 241 tacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtc 299 || ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||| Sbjct: 37428 taaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtc 37487 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 37488 cagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaat 37547 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 37548 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagtt 37607 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||| Sbjct: 37608 aagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatga 37667 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 37668 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 37721 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 37722 gaagaatgagccggcgactcatag 37745
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 745 bits (376), Expect = 0.0 Identities = 523/569 (91%), Gaps = 11/569 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| Sbjct: 128399 gaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccgg 128340 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||| Sbjct: 128339 agattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagac 128281 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 128280 aacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgt 128221 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-- 238 |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128220 agtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcga 128161 Query: 239 ----aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggcta 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 128160 tacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaa 128101 Query: 295 aagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 354 |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||| Sbjct: 128100 gagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgt 128041 Query: 355 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128040 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 127981 Query: 415 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 474 |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 127980 tagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaa 127921 Query: 475 cgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgc 534 | ||||||||| |||||||||||||||||||| | | | ||||||||||||| ||| Sbjct: 127920 catgaaaccgta---agctcccaagcagtgggaggagaattg-gatctctgaccgcatgc 127865 Query: 535 ctgttgaagaatgagccggcgactcatag 563 ||||||| ||||||||||||||||||||| Sbjct: 127864 ctgttgaggaatgagccggcgactcatag 127836 Score = 745 bits (376), Expect = 0.0 Identities = 523/569 (91%), Gaps = 11/569 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| Sbjct: 95048 gaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccgg 95107 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||| Sbjct: 95108 agattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagac 95166 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 95167 aacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgt 95226 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-- 238 |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95227 agtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcga 95286 Query: 239 ----aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggcta 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 95287 tacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaa 95346 Query: 295 aagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 354 |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||| Sbjct: 95347 gagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgt 95406 Query: 355 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95407 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 95466 Query: 415 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 474 |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 95467 tagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaa 95526 Query: 475 cgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgc 534 | ||||||||| |||||||||||||||||||| | | | ||||||||||||| ||| Sbjct: 95527 catgaaaccgta---agctcccaagcagtgggaggagaattg-gatctctgaccgcatgc 95582 Query: 535 ctgttgaagaatgagccggcgactcatag 563 ||||||| ||||||||||||||||||||| Sbjct: 95583 ctgttgaggaatgagccggcgactcatag 95611
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 745 bits (376), Expect = 0.0 Identities = 520/564 (92%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4117 gaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgg 4176 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 4177 agattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagagat 4235 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4236 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 4295 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4296 agtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaa 4355 Query: 241 tacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtc 299 || ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||| Sbjct: 4356 taaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtc 4415 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 4416 cagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaat 4475 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4476 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagtt 4535 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||| Sbjct: 4536 aagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatga 4595 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 4596 aaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 4649 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 4650 gaagaatgagccggcgactcatag 4673
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 743 bits (375), Expect = 0.0 Identities = 521/564 (92%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 116162 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccgg 116103 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||| Sbjct: 116102 agattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagac 116044 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 116043 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgt 115984 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | Sbjct: 115983 agtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagcta 115925 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||| Sbjct: 115924 aataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtcc 115865 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 115864 agtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatc 115805 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 115804 ccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcga 115745 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 115744 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 115685 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtg-atctctgaccgcgtgcctgtt 539 |||| | |||||||||||||||||||| | || || ||||||||||||||||||||| Sbjct: 115684 accg---taagctcccaagcagtgggaggag--aattgaatctctgaccgcgtgcctgtt 115630 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 115629 gaagaatgagccggcgacttatag 115606 Score = 743 bits (375), Expect = 0.0 Identities = 521/564 (92%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 85958 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccgg 86017 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||| Sbjct: 86018 agattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagac 86076 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86077 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgt 86136 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | Sbjct: 86137 agtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagcta 86195 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||| Sbjct: 86196 aataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtcc 86255 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 86256 agtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatc 86315 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 86316 ccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcga 86375 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 86376 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 86435 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtg-atctctgaccgcgtgcctgtt 539 |||| | |||||||||||||||||||| | || || ||||||||||||||||||||| Sbjct: 86436 accg---taagctcccaagcagtgggaggag--aattgaatctctgaccgcgtgcctgtt 86490 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 86491 gaagaatgagccggcgacttatag 86514
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 733 bits (370), Expect = 0.0 Identities = 519/564 (92%), Gaps = 6/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2091 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccgg 2150 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||| Sbjct: 2151 agattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagac 2209 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2210 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 2269 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2270 agtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaa 2329 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||| Sbjct: 2330 aataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtcc 2389 Query: 301 agtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaat 359 ||||||||||||||| || | || ||||||| ||||||||||||||||||||||||||| Sbjct: 2390 agtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaat 2449 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 2450 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtg 2509 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 2510 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 2569 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 2570 aaccg---taagctcccaagcagtggga-ggagaatcgaatctctgaccgcgtgcctgtt 2625 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 2626 gaagaatgagccggcgacttatag 2649
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 733 bits (370), Expect = 0.0 Identities = 515/560 (91%), Gaps = 5/560 (0%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 51 gaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatggatccggaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||||||| |||||||| |||||| |||||||| ||| |||| ||||||||||| Sbjct: 111 ttcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaac 169 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 170 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagt 229 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 243 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 230 agcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagt 289 Query: 244 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 303 | |||||||| |||||||||||| ||||| | | ||||| ||||||| | |||||||| Sbjct: 290 aggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagt 349 Query: 304 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 363 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 350 agccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccg 409 Query: 364 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 423 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 410 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 469 Query: 424 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 483 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 470 agtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaacc 529 Query: 484 gtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaag 543 | | |||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 530 g---taagctcccaagcagtggga-ggagaatcgaatctctgaccgcgtgcctgttgaag 585 Query: 544 aatgagccggcgactcatag 563 ||||||||||||||| |||| Sbjct: 586 aatgagccggcgacttatag 605
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 733 bits (370), Expect = 0.0 Identities = 519/564 (92%), Gaps = 6/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118102 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccgg 118043 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||| Sbjct: 118042 agattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagac 117984 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 117983 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 117924 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117923 agtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaa 117864 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||| Sbjct: 117863 aataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtcc 117804 Query: 301 agtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaat 359 ||||||||||||||| || | || ||||||| ||||||||||||||||||||||||||| Sbjct: 117803 agtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaat 117744 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 117743 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtg 117684 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 117683 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 117624 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 117623 aaccg---taagctcccaagcagtggga-ggagaatcgaatctctgaccgcgtgcctgtt 117568 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 117567 gaagaatgagccggcgacttatag 117544 Score = 733 bits (370), Expect = 0.0 Identities = 519/564 (92%), Gaps = 6/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 90000 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccgg 90059 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||| Sbjct: 90060 agattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagac 90118 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 90119 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 90178 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 90179 agtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaa 90238 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||| Sbjct: 90239 aataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtcc 90298 Query: 301 agtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaat 359 ||||||||||||||| || | || ||||||| ||||||||||||||||||||||||||| Sbjct: 90299 agtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaat 90358 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 90359 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtg 90418 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 90419 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 90478 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 90479 aaccg---taagctcccaagcagtggga-ggagaatcgaatctctgaccgcgtgcctgtt 90534 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 90535 gaagaatgagccggcgacttatag 90558
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 728 bits (367), Expect = 0.0 Identities = 476/509 (93%), Gaps = 5/509 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 55 gaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccgg 114 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||| Sbjct: 115 agattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagac 173 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 233 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 293 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||| Sbjct: 294 tacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtcc 353 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 354 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 413 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 473 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| |||| Sbjct: 474 agtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaa 532 Query: 481 accgtgctgagctcccaagcagtgggagg 509 |||| | ||||| |||||||||||||| Sbjct: 533 accg---taagctctcaagcagtgggagg 558
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 728 bits (367), Expect = 0.0 Identities = 475/507 (93%), Gaps = 8/507 (1%) Strand = Plus / Minus Query: 58 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 117 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 118 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 178 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 238 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 296 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 357 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 416 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 417 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 476 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 477 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 536 |||||||| | |||||||||||||||||||| | | | |||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcct 40 Query: 537 gttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||| Sbjct: 39 gttgaagaatgagccggcgactcatag 13
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 724 bits (365), Expect = 0.0 Identities = 516/563 (91%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 3937 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccgg 3996 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||| Sbjct: 3997 agattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagac 4055 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4056 aacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 4115 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4116 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 4175 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||| Sbjct: 4176 tataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtcc 4235 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||| |||| |||| || | |||||||||||||||||||||||||||| Sbjct: 4236 agtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatc 4295 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4296 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 4355 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 4356 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 4415 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 | || | |||| |||||||||| || || ||| ||||||||||||||||||||||| Sbjct: 4416 atcg---taagcttccaagcagtgaga-ggagaatcggatctctgaccgcgtgcctgttg 4471 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 4472 aagaatgagccggcgacttatag 4494
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 724 bits (365), Expect = 0.0 Identities = 516/563 (91%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 31 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccgg 90 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||||||||||| |||||||||||| || |||||||||| Sbjct: 91 agattcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagagac 149 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| Sbjct: 150 aacctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgt 209 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 210 agtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagcta 269 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 | |||| |||| ||||||||||||| ||||||| | ||||||||||||| | ||||| Sbjct: 270 aagaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtcc 329 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||| |||||||||| || ||||| ||||| ||||||||| |||||||||||||||||| Sbjct: 330 agtaaccgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatc 389 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 449 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 450 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 509 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||| ||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 510 accgta---agcttccaagcagtgggaggagaatcg-gatctctgaccgcgtgcctgttg 565 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 566 aagaatgagccggcgacttatag 588
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 724 bits (365), Expect = 0.0 Identities = 516/563 (91%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 47 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccgg 106 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||| Sbjct: 107 agattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagac 165 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 166 aacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 225 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 226 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 285 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||| Sbjct: 286 tataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtcc 345 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||| |||| |||| || | |||||||||||||||||||||||||||| Sbjct: 346 agtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatc 405 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 465 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 466 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 525 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 | || | |||| |||||||||| || || ||| ||||||||||||||||||||||| Sbjct: 526 atcg---taagcttccaagcagtgaga-ggagaatcggatctctgaccgcgtgcctgttg 581 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 582 aagaatgagccggcgacttatag 604
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 724 bits (365), Expect = 0.0 Identities = 516/563 (91%), Gaps = 5/563 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 151198 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccgg 151139 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||| Sbjct: 151138 agattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagac 151080 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 151079 aacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 151020 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 151019 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 150960 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||| Sbjct: 150959 tataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtcc 150900 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||| |||| |||| || | |||||||||||||||||||||||||||| Sbjct: 150899 agtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatc 150840 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150839 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 150780 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 150779 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 150720 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 | || | |||| |||||||||| || || ||| ||||||||||||||||||||||| Sbjct: 150719 atcg---taagcttccaagcagtgaga-ggagaatcggatctctgaccgcgtgcctgttg 150664 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 150663 aagaatgagccggcgacttatag 150641 Score = 724 bits (365), Expect = 0.0 Identities = 516/563 (91%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 117468 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccgg 117527 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||| Sbjct: 117528 agattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagac 117586 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117587 aacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 117646 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117647 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 117706 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||| Sbjct: 117707 tataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtcc 117766 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||| |||| |||| || | |||||||||||||||||||||||||||| Sbjct: 117767 agtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatc 117826 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117827 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 117886 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 117887 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 117946 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 | || | |||| |||||||||| || || ||| ||||||||||||||||||||||| Sbjct: 117947 atcg---taagcttccaagcagtgaga-ggagaatcggatctctgaccgcgtgcctgttg 118002 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 118003 aagaatgagccggcgacttatag 118025
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 724 bits (365), Expect = 0.0 Identities = 516/563 (91%), Gaps = 5/563 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 47 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccgg 106 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||| Sbjct: 107 agattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagac 165 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 166 aacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 225 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 226 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 285 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||| Sbjct: 286 tataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtcc 345 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 |||||||||||||| |||| |||| || | |||||||||||||||||||||||||||| Sbjct: 346 agtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatc 405 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 465 Query: 421 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 480 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 466 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 525 Query: 481 accgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttg 540 | || | |||| |||||||||| || || ||| ||||||||||||||||||||||| Sbjct: 526 atcg---taagcttccaagcagtgaga-ggagaatcggatctctgaccgcgtgcctgttg 581 Query: 541 aagaatgagccggcgactcatag 563 |||||||||||||||||| |||| Sbjct: 582 aagaatgagccggcgacttatag 604
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 722 bits (364), Expect = 0.0 Identities = 435/455 (95%), Gaps = 4/455 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 44 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 103 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 104 agattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagac 162 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 222 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 282 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| |||||||||||||||||||| || | | |||||||||||||| | ||||| Sbjct: 283 tacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtcc 342 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 343 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 402 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || Sbjct: 403 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtga 460 Query: 421 agtagtaccgtgagggaaaggtgaaaagaaccccc 455 |||||||||||||||||| |||| ||||||||||| Sbjct: 461 agtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 722 bits (364), Expect = 0.0 Identities = 519/567 (91%), Gaps = 9/567 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 48 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatggatccgg 107 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| ||||||||||||||| |||||||| ||| || |||||||||| Sbjct: 108 agattcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagac 166 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 167 aacccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgt 226 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 227 agtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagcta 286 Query: 241 tacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 296 ||||| || ||| ||||||||||||||| ||||||| | |||||| |||||| | | Sbjct: 287 tacaaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgaga 346 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 |||||||| |||||||||| || | |||||||||| |||||||||||||||||||||||| Sbjct: 347 gtccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtgg 406 Query: 357 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 466 Query: 417 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 476 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 467 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 526 Query: 477 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 536 ||||||||| |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 527 tgaaaccgta---agctcccaagcagtgggaggagaatcg-gatctctgaccgcgtgcct 582 Query: 537 gttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||| |||| Sbjct: 583 gttgaagaatgagccggcgacttatag 609
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 716 bits (361), Expect = 0.0 Identities = 425/445 (95%), Gaps = 1/445 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 24 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 83 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||| Sbjct: 84 agattcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagac 142 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 143 aacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgt 202 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 262 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 ||||||||| ||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 263 tacaagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtcc 322 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 323 agtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatc 382 Query: 361 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 442 Query: 421 agtagtaccgtgagggaaaggtgaa 445 |||||||||||||||||| |||||| Sbjct: 443 agtagtaccgtgagggaagggtgaa 467
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 714 bits (360), Expect = 0.0 Identities = 446/472 (94%), Gaps = 7/472 (1%) Strand = Plus / Plus Query: 93 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 152 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 153 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 213 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 271 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 272 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 331 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 332 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 392 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 451 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 452 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 511 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 512 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 cca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 482
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 714 bits (360), Expect = 0.0 Identities = 522/564 (92%), Gaps = 19/564 (3%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 686 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 627 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||||| ||| |||| |||||||||||||| ||||||||||||| Sbjct: 626 agattcccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggcaagagac 574 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcgattcccg 179 | || |||| ||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 573 a--ct-gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcgattcccg 520 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcg 460 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 299 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 459 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 400 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 399 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 340 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 280 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 279 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 220 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 219 aaccg---taagctcccaagcagtgggaggagcccgggg--ctctgaccgcgtgcctgtt 165 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 164 gaagaatgagccggcgactcatag 141
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 710 bits (358), Expect = 0.0 Identities = 516/564 (91%), Gaps = 6/564 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 146512 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccgg 146453 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||| Sbjct: 146452 agattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagac 146394 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146393 aacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 146334 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 146333 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 146274 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||| Sbjct: 146273 tataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtcc 146214 Query: 301 agtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaat 359 ||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||| Sbjct: 146213 agtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaat 146154 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 146153 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagca 146094 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 146093 aagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatga 146034 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | ||||||||||||||||| || ||| |||| ||||||||||||||||| Sbjct: 146033 aaccg---taggctcccaagcagtggga-ggagaatcggatccctgaccgcgtgcctgtt 145978 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 145977 gaagaatgagccggcgacttatag 145954 Score = 710 bits (358), Expect = 0.0 Identities = 516/564 (91%), Gaps = 6/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 111950 gaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccgg 112009 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||| Sbjct: 112010 agattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagac 112068 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112069 aacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgt 112128 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112129 agtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaa 112188 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 || ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||| Sbjct: 112189 tataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtcc 112248 Query: 301 agtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaat 359 ||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||| Sbjct: 112249 agtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaat 112308 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112309 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagca 112368 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 112369 aagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatga 112428 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | ||||||||||||||||| || ||| |||| ||||||||||||||||| Sbjct: 112429 aaccg---taggctcccaagcagtggga-ggagaatcggatccctgaccgcgtgcctgtt 112484 Query: 540 gaagaatgagccggcgactcatag 563 ||||||||||||||||||| |||| Sbjct: 112485 gaagaatgagccggcgacttatag 112508
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 51 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 110 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 111 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 171 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 231 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 291 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 350 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 351 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 411 ccgata 416 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 396 bits (200), Expect = e-107 Identities = 210/212 (99%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 352 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcg 122642 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||| ||||||||| Sbjct: 122641 tgcctgttgaagaatgagccggtgactcatag 122610
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 241 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 301 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 360 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 396 bits (200), Expect = e-107 Identities = 210/212 (99%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 352 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcg 12825183 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||| ||||||||| Sbjct: 12825182 tgcctgttgaagaatgagccggtgactcatag 12825151 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 656 bits (331), Expect = 0.0 Identities = 377/392 (96%), Gaps = 14/392 (3%) Strand = Plus / Minus Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 237 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 357 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 75128 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||| Sbjct: 75127 tgcctgttgaagaatgagccggcgactcatag 75096 Score = 351 bits (177), Expect = 2e-93 Identities = 180/181 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75665 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 75606 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 75605 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 75546 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75545 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 75486 Query: 181 a 181 | Sbjct: 75485 a 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 108 gcaggcaagagacaacctggcgaactgaaacatcttagta 147 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 656 bits (331), Expect = 0.0 Identities = 377/392 (96%), Gaps = 14/392 (3%) Strand = Plus / Plus Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 237 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 357 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 382410 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||| Sbjct: 382411 tgcctgttgaagaatgagccggcgactcatag 382442 Score = 351 bits (177), Expect = 2e-93 Identities = 180/181 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381873 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 381932 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 381933 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 381992 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381993 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 382052 Query: 181 a 181 | Sbjct: 382053 a 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 108 gcaggcaagagacaacctggcgaactgaaacatcttagta 147 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 108 gcaggcaagagacaacctggcgaactgaaacatcttagta 147 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 656 bits (331), Expect = 0.0 Identities = 377/392 (96%), Gaps = 14/392 (3%) Strand = Plus / Minus Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 237 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 357 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 113219 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||| Sbjct: 113218 tgcctgttgaagaatgagccggcgactcatag 113187 Score = 351 bits (177), Expect = 2e-93 Identities = 180/181 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113756 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 113697 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 113696 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 113637 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113636 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 113577 Query: 181 a 181 | Sbjct: 113576 a 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 108 gcaggcaagagacaacctggcgaactgaaacatcttagta 147 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 656 bits (331), Expect = 0.0 Identities = 377/392 (96%), Gaps = 14/392 (3%) Strand = Plus / Minus Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 237 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 357 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 367901 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||| Sbjct: 367900 tgcctgttgaagaatgagccggcgactcatag 367869 Score = 656 bits (331), Expect = 0.0 Identities = 377/392 (96%), Gaps = 14/392 (3%) Strand = Plus / Minus Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 237 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 297 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 357 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 411 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 412 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 472 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 531 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 184506 Query: 532 tgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||| Sbjct: 184505 tgcctgttgaagaatgagccggcgactcatag 184474 Score = 351 bits (177), Expect = 2e-93 Identities = 180/181 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368438 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 368379 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 368378 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 368319 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368318 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 368259 Query: 181 a 181 | Sbjct: 368258 a 368258 Score = 351 bits (177), Expect = 2e-93 Identities = 180/181 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185043 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 184984 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 184983 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 184924 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184923 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 184864 Query: 181 a 181 | Sbjct: 184863 a 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 108 gcaggcaagagacaacctggcgaactgaaacatcttagta 147 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 634 bits (320), Expect = e-179 Identities = 507/564 (89%), Gaps = 9/564 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 gaggaagggtgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgt 106 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| ||| || ||||||| | ||||| |||| |||||||| ||||| ||||||| Sbjct: 107 agattcccgaatggggtaacctttcacactgc-tgctcaatccatgggcaggaaagagac 165 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 166 aacctggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattcccat 225 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 226 agtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagagcaa 285 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 || |||||| ||||||||||||||||| | || | || |||||||||||||| |||||| Sbjct: 286 taaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaagtc 345 Query: 300 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 359 |||||| | |||||||||||| || |||||||||||||||||||||| |||||| ||| Sbjct: 346 cagtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtgtaat 405 Query: 360 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 419 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 406 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaatagta 465 Query: 420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 479 ||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||| ||| Sbjct: 466 aagtagtaccgtgagggaagggtgaaaagaa-ccccattggggagtgaaatagaacatga 524 Query: 480 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||| ||||||||||||||| | | | ||||||||||||||||||| Sbjct: 525 aaccg---taagctaccaagcagtgggaggagcca---gggctctgaccgcgtgcctgtt 578 Query: 540 gaagaatgagccggcgactcatag 563 |||||||||||||||||||||||| Sbjct: 579 gaagaatgagccggcgactcatag 602
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 78 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 137 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 138 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 198 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 258 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 317 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 318 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 377 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 378 gaccaccttgcaaggctaaatactcctgggtg 409 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 517 bits (261), Expect = e-143 Identities = 271/273 (99%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 291 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 350 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 351 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 411 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 471 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 530 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgc 239 Query: 531 gtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||| Sbjct: 240 gtgcctgttgaagaatgagccggcgactcatag 272
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 515 bits (260), Expect = e-143 Identities = 353/379 (93%), Gaps = 5/379 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2646 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 2705 Query: 61 agattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119 ||||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||| Sbjct: 2706 ggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagaga 2764 Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2765 caacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 2824 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2825 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagct 2884 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaag 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | || Sbjct: 2885 atacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagag 2944 Query: 298 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 357 |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| Sbjct: 2945 tccagtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtgga 3003 Query: 358 atcccgtgtgaatcagcaa 376 ||||||||||||||||||| Sbjct: 3004 atcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 515 bits (260), Expect = e-143 Identities = 353/379 (93%), Gaps = 5/379 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 901 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgg 960 Query: 61 agattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119 ||||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||| Sbjct: 961 ggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagaga 1019 Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 caacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 1079 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagct 1139 Query: 240 atacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaag 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | || Sbjct: 1140 atacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagag 1199 Query: 298 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 357 |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| Sbjct: 1200 tccagtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtgga 1258 Query: 358 atcccgtgtgaatcagcaa 376 ||||||||||||||||||| Sbjct: 1259 atcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 494 bits (249), Expect = e-136 Identities = 480/555 (86%), Gaps = 4/555 (0%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 143969 gaagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggaga 144028 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||||||| |||||| |||||||||||||||| || ||||| ||||||||||| Sbjct: 144029 ttcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaac 144088 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 | ||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 144089 ccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagt 144148 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 243 | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144149 aacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatga 144208 Query: 244 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 303 || | || | ||||||||||| ||||||||| |||||| |||||| | |||||||| Sbjct: 144209 gggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagt 144268 Query: 304 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 363 ||||| ||| | |||||| | |||| |||| |||||||||||||||| ||||||| Sbjct: 144269 agccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccg 144328 Query: 364 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 423 ||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 144329 tgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagc 144388 Query: 424 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 483 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 144389 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 144448 Query: 484 gtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaag 543 | ||||||||||||||||||| || ||| | ||||||| |||||||||||||||||| Sbjct: 144449 g---cgagctcccaagcagtggga-ggagaatgagatctctaaccgcgtgcctgttgaag 144504 Query: 544 aatgagccggcgact 558 ||||||||||||||| Sbjct: 144505 aatgagccggcgact 144519 Score = 494 bits (249), Expect = e-136 Identities = 480/555 (86%), Gaps = 4/555 (0%) Strand = Plus / Minus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 88882 gaagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggaga 88823 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||||||| |||||| |||||||||||||||| || ||||| ||||||||||| Sbjct: 88822 ttcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaac 88763 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 | ||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 88762 ccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagt 88703 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 243 | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88702 aacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatga 88643 Query: 244 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 303 || | || | ||||||||||| ||||||||| |||||| |||||| | |||||||| Sbjct: 88642 gggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagt 88583 Query: 304 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 363 ||||| ||| | |||||| | |||| |||| |||||||||||||||| ||||||| Sbjct: 88582 agccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccg 88523 Query: 364 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 423 ||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 88522 tgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagc 88463 Query: 424 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 483 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 88462 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 88403 Query: 484 gtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaag 543 | ||||||||||||||||||| || ||| | ||||||| |||||||||||||||||| Sbjct: 88402 g---cgagctcccaagcagtggga-ggagaatgagatctctaaccgcgtgcctgttgaag 88347 Query: 544 aatgagccggcgact 558 ||||||||||||||| Sbjct: 88346 aatgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 486 bits (245), Expect = e-134 Identities = 248/249 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 104 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 164 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 224 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 284 Query: 241 tacaagcgt 249 ||||||||| Sbjct: 285 tacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 486 bits (245), Expect = e-134 Identities = 248/249 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 104 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 164 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 224 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 284 Query: 241 tacaagcgt 249 ||||||||| Sbjct: 285 tacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 460 bits (232), Expect = e-126 Identities = 312/336 (92%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 177078 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccgg 177137 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 177138 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagag 177196 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 240 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 241 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 299 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 300 cagtagccgaaagcatcactagcttatgctctgacc 335 |||||||||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 177447 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagc 149 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagc 149 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 418 bits (211), Expect = e-114 Identities = 485/571 (84%), Gaps = 19/571 (3%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||| ||||| ||||||||||| || | |||||||||||||||| Sbjct: 139222 gaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatccgg 139165 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----caag 116 |||| ||| ||| ||| |||| || ||||||| ||||||||| | || |||| Sbjct: 139164 agatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggcaag 139109 Query: 117 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 176 |||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||||| Sbjct: 139108 agacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgattc 139049 Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 ||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 139048 ccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggaga 138989 Query: 237 gcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 292 || ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| || Sbjct: 138988 gcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacggt 138930 Query: 293 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 352 || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||||| Sbjct: 138929 tagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggcac 138870 Query: 353 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 412 ||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||||| Sbjct: 138869 gtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgacc 138810 Query: 413 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 472 ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 138809 gatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatag 138750 Query: 473 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgt 532 ||| ||||||||| ||||||| |||||||||||| | | | ||||||||||||||| Sbjct: 138749 aacatgaaaccgta---agctcccgagcagtgggaggagaattg-gatctctgaccgcgt 138694 Query: 533 gcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||| |||| Sbjct: 138693 gcctgttgaagaatgagccggcgacttatag 138663 Score = 418 bits (211), Expect = e-114 Identities = 485/571 (84%), Gaps = 19/571 (3%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||| ||||| ||||||||||| || | |||||||||||||||| Sbjct: 82655 gaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatccgg 82712 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----caag 116 |||| ||| ||| ||| |||| || ||||||| ||||||||| | || |||| Sbjct: 82713 agatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggcaag 82768 Query: 117 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 176 |||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||||| Sbjct: 82769 agacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgattc 82828 Query: 177 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 ||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 82829 ccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggaga 82888 Query: 237 gcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 292 || ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| || Sbjct: 82889 gcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacggt 82947 Query: 293 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 352 || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||||| Sbjct: 82948 tagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggcac 83007 Query: 353 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 412 ||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||||| Sbjct: 83008 gtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgacc 83067 Query: 413 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 472 ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 83068 gatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatag 83127 Query: 473 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgt 532 ||| ||||||||| ||||||| |||||||||||| | | | ||||||||||||||| Sbjct: 83128 aacatgaaaccgta---agctcccgagcagtgggaggagaattg-gatctctgaccgcgt 83183 Query: 533 gcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||| |||| Sbjct: 83184 gcctgttgaagaatgagccggcgacttatag 83214
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 418 bits (211), Expect = e-114 Identities = 221/223 (99%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 341 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 401 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 461 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 520 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 179 Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 222
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 73 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 132 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 193 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 252 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 253 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 312 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 313 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 372 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 373 gcaaggaccaccttgcaag 391 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 400 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 459 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 460 ggtagtgaaatagaacgtgaaacc 483 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcatag 3207 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||| ||| |||||||||||||||| | |||||| |||||||| |||||| || Sbjct: 3755 gaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgtagatcagg 3696 Query: 61 ag 62 || Sbjct: 3695 ag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 170 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 229 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 230 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 288 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 289 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 348 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 349 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 409 gaccgata 416 |||||||| Sbjct: 241 gaccgata 248
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 396 bits (200), Expect = e-107 Identities = 311/346 (89%), Gaps = 4/346 (1%) Strand = Plus / Minus Query: 218 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 277 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 278 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 337 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 338 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 398 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 457 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 458 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 517 ||| ||||||||||||| |||||||| | ||| ||||||||||||| || ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggagaatgg 5989 Query: 518 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 5988 aatctctgaccgcgtgccttttgaagaatgagccggcgacttatag 5943 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 17 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 76 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 77 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 136 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 137 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 196 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 197 atgggagcagcctaaaccgt 216 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 394 bits (199), Expect = e-106 Identities = 206/207 (99%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 357 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 417 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 477 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 536 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcct 179 Query: 537 gttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatgagccggcgactcatag 206
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 391 bits (197), Expect = e-105 Identities = 253/270 (93%), Gaps = 5/270 (1%) Strand = Plus / Plus Query: 294 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 353 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 354 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 414 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 473 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 474 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtg 533 || |||||||| | |||||||||||||||||||||| | | ||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccgggg--ctctgaccgcgtg 237 Query: 534 cctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||| Sbjct: 238 cctgttgaagaatgagccggcgactcatag 267
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 373 bits (188), Expect = e-100 Identities = 222/232 (95%), Gaps = 1/232 (0%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79723 gaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccga 79664 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||| Sbjct: 79663 ggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagac 79605 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79604 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 79545 Query: 181 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 232 |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79544 agtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 363 bits (183), Expect = 4e-97 Identities = 186/187 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75813 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 75872 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75873 agattcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagagac 75932 Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75933 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 75992 Query: 181 agtagcg 187 ||||||| Sbjct: 75993 agtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 454 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ggcgaactgaaacatcttag 145 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 279 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 338 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 339 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 398 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 399 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 458 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 459 gggtagtgaaatagaacgtgaaaccgt 485 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 317 bits (160), Expect = 2e-83 Identities = 392/461 (85%), Gaps = 10/461 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 202 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 261 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 262 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 321 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 322 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 380 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 381 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 440 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 441 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 481 |||||||||||||||| |||| |||||| |||||| ||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaa 520 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcata 595
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 287 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 345 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 346 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 405 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 406 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 465 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 466 gaaatagaacgtgaaaccgtgctgagctcc 495 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 287 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 345 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 346 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 405 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 406 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 465 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 466 gaaatagaacgtgaaaccgtgctgagctcc 495 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 287 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 345 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 346 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 405 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 406 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 465 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 466 gaaatagaacgtgaaaccgtgctgagctcc 495 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 287 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 345 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 346 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 405 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 406 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 465 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 466 gaaatagaacgtgaaaccgtgctgagctcc 495 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 280 bits (141), Expect = 5e-72 Identities = 210/231 (90%), Gaps = 4/231 (1%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 512 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 553 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 || | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 554 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 604 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||| Sbjct: 38 gaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggaga 97 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 | ||| |||||| ||||| || |||||||||||||| || | |||||||||||||| Sbjct: 98 tgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaac 157 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 158 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 217 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgt 216 || |||||||||||||||| ||||||||||||| Sbjct: 218 agtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 280 bits (141), Expect = 5e-72 Identities = 210/231 (90%), Gaps = 4/231 (1%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 512 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 566 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 || | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 567 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 617 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||| Sbjct: 51 gaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 | ||| |||||| ||||| || |||||||||||||| || | |||||||||||||| Sbjct: 111 tgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaac 170 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 171 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 230 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgt 216 || |||||||||||||||| ||||||||||||| Sbjct: 231 agtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 278 bits (140), Expect = 2e-71 Identities = 209/230 (90%), Gaps = 4/230 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 671 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 672 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 721 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||||||||||||||||||||||||| || ||| || |||||| |||||||||| Sbjct: 155 gaagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggaga 214 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 | ||| |||||| ||||| || |||||||||||||| || | |||||||||||||| Sbjct: 215 tgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaac 274 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 275 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 334 Query: 184 agcggcgagcgaaatgggagcagcctaaaccg 215 || |||||||||||||||| |||||||||||| Sbjct: 335 agtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 274 bits (138), Expect = 3e-70 Identities = 226/254 (88%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 309 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 368 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 369 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 428 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 429 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 488 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 489 gagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatga 548 |||| ||||||||||||||| | | | |||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagcca---gggctctgaccgcgtgcctgttgaagaatga 606 Query: 549 gccggcgactcata 562 |||||||||||||| Sbjct: 607 gccggcgactcata 620 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 108 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 167 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 168 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 227 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 228 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 287 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 288 a 288 | Sbjct: 325 a 325
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434059 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 19434000 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19433999 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 19433940 Query: 121 aacctggcgaactgaaacat 140 |||||||||||||||||||| Sbjct: 19433939 aacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 509 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 550 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 426 taccgtgagggaaaggtgaaaagaacc 452 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 512 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atag-aatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 62 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 63 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 122 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 123 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 183 tagcggcgagcgaaatgggagcagcctaaacc 214 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51586 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 51527 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 51526 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 51467 Query: 121 aacctggcgaactgaaacat 140 |||||||||||||||||||| Sbjct: 51466 aacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119550 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 119491 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119490 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 119431 Query: 121 aacctggcgaactgaaacat 140 |||||||||||||||||||| Sbjct: 119430 aacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6072 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 6131 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6132 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 6191 Query: 121 aacctggcgaactgaaacat 140 |||||||||||||||||||| Sbjct: 6192 aacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 266 bits (134), Expect = 7e-68 Identities = 137/138 (99%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1592 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 1651 Query: 61 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1652 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 1711 Query: 121 aacctggcgaactgaaac 138 |||||||||||||||||| Sbjct: 1712 aacctggcgaactgaaac 1729
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 254 bits (128), Expect = 3e-64 Identities = 206/230 (89%), Gaps = 4/230 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 553 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 554 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttatag 603 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||| || |||||||| ||| |||| || ||| || |||||| |||||||||| Sbjct: 38 gaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggaga 97 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 | ||| |||||| |||||| || |||| | ||||||| || || | ||||||||| Sbjct: 98 tccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaac 157 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 158 ctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagt 217 Query: 184 agcggcgagcgaaatgggagcagcctaaacc 214 |||||||||||||| |||| ||| ||||||| Sbjct: 218 agcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 254 bits (128), Expect = 3e-64 Identities = 206/230 (89%), Gaps = 4/230 (1%) Strand = Plus / Minus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 115109 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 115108 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttatag 115059 Score = 254 bits (128), Expect = 3e-64 Identities = 206/230 (89%), Gaps = 4/230 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 86879 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 86880 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttatag 86929 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Minus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||| || |||||||| ||| |||| || ||| || |||||| |||||||||| Sbjct: 115625 gaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggaga 115566 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 | ||| |||||| |||||| || |||| | ||||||| || || | ||||||||| Sbjct: 115565 tccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaac 115506 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 115505 ctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagt 115446 Query: 184 agcggcgagcgaaatgggagcagcctaaacc 214 |||||||||||||| |||| ||| ||||||| Sbjct: 115445 agcggcgagcgaaaggggaacagtctaaacc 115415 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||| || |||||||| ||| |||| || ||| || |||||| |||||||||| Sbjct: 86363 gaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggaga 86422 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 | ||| |||||| |||||| || |||| | ||||||| || || | ||||||||| Sbjct: 86423 tccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaac 86482 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86483 ctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagt 86542 Query: 184 agcggcgagcgaaatgggagcagcctaaacc 214 |||||||||||||| |||| ||| ||||||| Sbjct: 86543 agcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 252 bits (127), Expect = 1e-63 Identities = 265/309 (85%), Gaps = 4/309 (1%) Strand = Plus / Plus Query: 255 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 314 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 315 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 374 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 375 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 434 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 435 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 494 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 495 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 554 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 597 Query: 555 gactcatag 563 |||| |||| Sbjct: 598 gacttatag 606 Score = 252 bits (127), Expect = 1e-63 Identities = 208/235 (88%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 51 gaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| ||| Sbjct: 111 cccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataac 170 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 171 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 230 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 238 |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 231 agcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 252 bits (127), Expect = 1e-63 Identities = 208/235 (88%) Strand = Plus / Minus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 125214 gaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaaga 125155 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| ||| Sbjct: 125154 cccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataac 125095 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 125094 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 125035 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 238 |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125034 agcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 252 bits (127), Expect = 1e-63 Identities = 265/309 (85%), Gaps = 4/309 (1%) Strand = Plus / Minus Query: 255 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 314 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 315 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 374 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 375 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 434 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 435 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 494 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 495 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 554 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 124668 Query: 555 gactcatag 563 |||| |||| Sbjct: 124667 gacttatag 124659 Score = 252 bits (127), Expect = 1e-63 Identities = 265/309 (85%), Gaps = 4/309 (1%) Strand = Plus / Plus Query: 255 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 314 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 315 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 374 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 375 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 434 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 435 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 494 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 495 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 554 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 95198 Query: 555 gactcatag 563 |||| |||| Sbjct: 95199 gacttatag 95207 Score = 252 bits (127), Expect = 1e-63 Identities = 208/235 (88%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 94652 gaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaaga 94711 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| ||| Sbjct: 94712 cccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataac 94771 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 94772 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 94831 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 238 |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94832 agcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 250 bits (126), Expect = 4e-63 Identities = 206/230 (89%), Gaps = 7/230 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 || | ||| |||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaaga 547 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 548 a---gat-tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 593 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 174 ttcccgtagtagcggcgagcgaa 196 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 242 bits (122), Expect = 1e-60 Identities = 205/230 (89%), Gaps = 7/230 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| ||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga---gga 583 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 || ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 584 aatagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 632 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 174 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 213 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 262 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 321 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 322 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 381 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 382 accttgcaaggctaaatactcctgggtgaccga 414 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 238 bits (120), Expect = 2e-59 Identities = 133/136 (97%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 428 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 487 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 488 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 547 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 107932 Query: 548 agccggcgactcatag 563 |||||||||||||||| Sbjct: 107931 agccggcgactcatag 107916
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 236 bits (119), Expect = 6e-59 Identities = 203/230 (88%), Gaps = 7/230 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||| | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 575 aag----ccctgaccgcgtgcctgttgaagaatgagccggcgacttatag 620 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 115 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 174 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 175 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| ||| Sbjct: 38 gaagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtaga 97 Query: 64 ttcccaaataggtcaacct 82 ||||| |||||| |||||| Sbjct: 98 ttcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 236 bits (119), Expect = 6e-59 Identities = 203/230 (88%), Gaps = 7/230 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||| | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 2344 aag----ccctgaccgcgtgcctgttgaagaatgagccggcgacttatag 2389 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 115 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 174 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 175 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| ||| Sbjct: 1804 gaagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtaga 1863 Query: 64 ttcccaaataggtcaacct 82 ||||| |||||| |||||| Sbjct: 1864 ttcccgaatagggcaacct 1882
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 281 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 340 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 341 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 400 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 401 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 460 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 461 gtagtgaaatagaacgtgaaa 481 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 82 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 83 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 142 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 143 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 202 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 203 gcagcctaaaccgtgaaaacggggttg 229 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 232 bits (117), Expect = 1e-57 Identities = 158/169 (93%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 1 gaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccg 59 ||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 89835 gaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccg 89776 Query: 60 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119 |||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 89775 gagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 89717 Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 168 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89716 caacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 232 bits (117), Expect = 1e-57 Identities = 158/169 (93%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccg 59 ||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 435 gaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccg 494 Query: 60 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119 |||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 495 gagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 553 Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 168 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 554 caacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 408 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 228 bits (115), Expect = 2e-56 Identities = 244/285 (85%), Gaps = 4/285 (1%) Strand = Plus / Plus Query: 279 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 338 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 339 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 398 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 399 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 458 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 459 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 518 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 4605 Query: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 4650 Score = 216 bits (109), Expect = 6e-53 Identities = 185/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 4084 gaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggaga 4143 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||| || |||| || |||||| ||||||||||| || | |||||| ||| Sbjct: 4144 ttcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaac 4202 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 4203 ctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagt 4262 Query: 184 agcggcgagcgaaatgggagcagcctaaa 212 |||||||||||||||||||| |||||||| Sbjct: 4263 agcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 228 bits (115), Expect = 2e-56 Identities = 244/285 (85%), Gaps = 4/285 (1%) Strand = Plus / Plus Query: 279 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 338 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 339 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 398 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 399 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 458 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 459 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 518 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 572 Query: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 617 Score = 208 bits (105), Expect = 1e-50 Identities = 184/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 51 gaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||| || |||| || |||||| ||||||| ||| || | |||||| ||| Sbjct: 111 ttcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaac 169 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 170 ctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagt 229 Query: 184 agcggcgagcgaaatgggagcagcctaaa 212 |||||||||||||||||||| |||||||| Sbjct: 230 agcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 228 bits (115), Expect = 2e-56 Identities = 244/285 (85%), Gaps = 4/285 (1%) Strand = Plus / Plus Query: 279 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 338 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 339 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 398 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 399 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 458 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 459 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 518 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 572 Query: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 617 Score = 216 bits (109), Expect = 6e-53 Identities = 185/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 51 gaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| ||| || |||| || |||||| ||||||||||| || | |||||| ||| Sbjct: 111 ttcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaac 169 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 170 ctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagt 229 Query: 184 agcggcgagcgaaatgggagcagcctaaa 212 |||||||||||||||||||| |||||||| Sbjct: 230 agcggcgagcgaaatgggagaagcctaaa 258
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 224 bits (113), Expect = 2e-55 Identities = 198/225 (88%), Gaps = 6/225 (2%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 -cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 19 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 78 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 79 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 138 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 139 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 198 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 199 gggagcagcctaaaccg 215 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 220 bits (111), Expect = 4e-54 Identities = 207/237 (87%), Gaps = 4/237 (1%) Strand = Plus / Plus Query: 327 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 386 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 387 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 446 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 447 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 506 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 507 agggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | | ||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 557 a-gaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 612 Score = 186 bits (94), Expect = 5e-44 Identities = 183/210 (87%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| ||||||||||| |||||||||||| ||||| | | |||||||||||| Sbjct: 51 gaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatccggaga 110 Query: 64 ttcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagacaa 122 ||||| ||| || |||| ||| |||||| ||||||| ||| ||| | ||||||||| Sbjct: 111 ttcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagacaa 169 Query: 123 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 182 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || || Sbjct: 170 cctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctgag 229 Query: 183 tagcggcgagcgaaatgggagcagcctaaa 212 ||||||||||||||||||||| |||||||| Sbjct: 230 tagcggcgagcgaaatgggagaagcctaaa 259
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 476 gtgaaa 481 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 ag 203 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 476 gtgaaa 481 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 agcagcctaa 211 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccg 484 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 19 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 78 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 79 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 138 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 139 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 198 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 199 gggagcagcctaaacc 214 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 296 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 355 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 356 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 415 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 416 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 475 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 476 gtgaaa 481 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 23 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 81 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 202 ag 203 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 562 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 6/225 (2%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 513 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga---gga 690 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 691 ttttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 174 ttcccgtagtagcggcgagcgaaatggga 202 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 208 bits (105), Expect = 1e-50 Identities = 201/233 (86%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| ||||||||||||||||||||||| || || ||| ||||||||| ||| Sbjct: 51 gaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatccgaaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| |||||| |||||| || ||| |||| ||| ||| | |||| ||||| ||| Sbjct: 111 ttcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaac 170 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 || | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||| Sbjct: 171 ctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagt 230 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 || ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 231 agtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 338 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 397 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 398 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 457 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 458 tgggtagtgaaatagaacgtgaaacc 483 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 606
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 110 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 169 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 170 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 214 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 193 cgaaatgggagcagcctaaacc 214 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 453 cc 454 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 112 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 171 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 172 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 525 gaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||| |||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttatag 600 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 60 |||||||||||| | | ||||||||||||||||||||||| ||| | || |||||||| Sbjct: 48 gaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatccgg 107 Query: 61 agat 64 |||| Sbjct: 108 agat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 338 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 397 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 398 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 457 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 458 tgggtagtgaaatagaacgtgaaacc 483 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 172 bits (87), Expect = 8e-40 Identities = 195/231 (84%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| ||||||||||||||||||||||| || || ||| ||| ||||| ||| Sbjct: 1818 gaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatccgaaga 1877 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| |||||| ||||| || ||| |||| |||| || | |||| ||||| ||| Sbjct: 1878 ttcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaac 1937 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 || | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||| Sbjct: 1938 ctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagt 1997 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 234 || ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1998 agtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 200 bits (101), Expect = 4e-48 Identities = 200/226 (88%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 452 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 512 ||| || || ||||||||||||| ||||||||| | ||| ||||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggg 616 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 617 --tttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 174 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 198 bits (100), Expect = 1e-47 Identities = 196/226 (86%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 512 |||| ||| ||||||||||| |||||||| | |||| |||||||||||| | | Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtggga-gaag 959 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 || | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 960 aatctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 170 bits (86), Expect = 3e-39 Identities = 183/213 (85%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| ||||||||||||||||||| | || || ||| || | ||||||| Sbjct: 454 gaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaacccggaga 511 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| |||||| |||||| | ||||||| |||||||| ||| || | |||||||||| Sbjct: 512 ttcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaac 570 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| Sbjct: 571 ctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttagt 630 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgt 216 || ||||||||||| |||| ||||||||||||| Sbjct: 631 agtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 193 cgaaatgggagcagcctaaacc 214 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 785
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 189 cgagcgaaatgggagcagcctaaac 213 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 620 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 82 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 674 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 82 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 193 cgaaatgggagcagcctaaacc 214 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 151767 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 42436
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 198 bits (100), Expect = 1e-47 Identities = 196/226 (86%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 338 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 397 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 398 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 457 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 458 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 517 ||| ||||||||||||| ||||||| | |||| |||||||||||||| ||| | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattg- 560 Query: 518 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 561 aacctttgaccgcgtgcctgttgaagaatgagccggcgacttatag 606 Score = 188 bits (95), Expect = 1e-44 Identities = 197/231 (85%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| |||||||||||||||||||||| || || ||||||| ||||| ||| Sbjct: 51 gaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatccgaaga 110 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| |||||| ||||| || ||| |||| |||| || | |||| ||||| ||| Sbjct: 111 ttcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaac 170 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 || | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 171 ctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagt 230 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 234 || ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 231 agtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 674 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 82 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 189 cgagcgaaatgggagcagcctaaac 213 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 620 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 82 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 608
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 693
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 196 bits (99), Expect = 5e-47 Identities = 201/232 (86%), Gaps = 11/232 (4%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 511 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 683 Query: 512 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 | || | | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 684 gtaa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 731 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 454 ccagtgggtagtgaaatagaacgtgaaacc 483 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||| | || |||||||| ||||||||||| || ||| ||||| |||||||||| Sbjct: 30 gaagggcgtggaaaccgacgaaacgcttcggggagctggaaacaagcaatgatccggaga 89 Query: 64 ttcccaaataggtcaacct 82 ||||| |||||| |||||| Sbjct: 90 ttcccgaatagggcaacct 108
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 328 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 387 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 388 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 447 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 448 gaacccccagtgggtagtgaaataga 473 ||||||||| |||| ||||||||||| Sbjct: 458 gaacccccactggggagtgaaataga 483 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 121 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 181 agtagcggcgagcgaaatgggagcagcctaaacc 214 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 569 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcgg 34 ||||||||||| ||||||||||| ||||||| Sbjct: 12 gaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 338 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 397 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 398 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 457 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 458 tgggtagtgaaatagaacgtgaaacc 483 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 192 bits (97), Expect = 9e-46 Identities = 199/233 (85%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| |||||||||||||||| |||||| || || ||| ||||||||| ||| Sbjct: 3085 gaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatccgaaga 3144 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| |||||| |||||| || ||| |||| ||| ||| |||| ||||| ||| Sbjct: 3145 ttcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaac 3204 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 || | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||| Sbjct: 3205 ctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagt 3264 Query: 184 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 236 || ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3265 agtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 3640
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 454 ccagtgggtagtgaaatagaacgtgaaacc 483 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 19 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 78 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 79 acct 82 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 337 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 396 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 397 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 456 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 457 gtgggtagtgaaatagaacgtgaaaccgt 485 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 531 gtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||| |||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatag 223
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 192 bits (97), Expect = 9e-46 Identities = 200/232 (86%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 511 | |||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggca 599 Query: 512 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||| || | |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 600 aaaaaagagc-ctgaccgcgtgcctattgaagaatgagccggcgacttatag 650 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 617 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 82 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||| |||||||||||||||||||||||||||||| |||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttatag 625
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 188 bits (95), Expect = 1e-44 Identities = 197/228 (86%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 394 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 510 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 511 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 193 cgaa 196 |||| Sbjct: 238 cgaa 241
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 199/231 (86%), Gaps = 7/231 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 512 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||| || |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatag 611 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 188 bits (95), Expect = 1e-44 Identities = 197/228 (86%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 394 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 510 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 511 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 193 cgaa 196 |||| Sbjct: 219 cgaa 222
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 188 bits (95), Expect = 1e-44 Identities = 158/177 (89%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 452 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 509 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaac 213 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactc 559 |||||||||||||||||||||||||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactc 575
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 188 bits (95), Expect = 1e-44 Identities = 197/228 (86%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 394 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 510 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 511 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 133 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 192 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 193 cgaa 196 |||| Sbjct: 238 cgaa 241
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 199/231 (86%), Gaps = 7/231 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 512 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||| || |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatag 611 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 509 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 509 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 115 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 174 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 175 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 115 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 174 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 175 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||||||| |||||||| || ||||||| || || |||| |||||||||| Sbjct: 171468 gaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggaga 171409 Query: 64 ttcccaaataggtcaacct 82 ||||| |||||| |||||| Sbjct: 171408 ttcccgaatagggcaacct 171390 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||||||| |||||||| || ||||||| || || |||| |||||||||| Sbjct: 121458 gaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggaga 121517 Query: 64 ttcccaaataggtcaacct 82 ||||| |||||| |||||| Sbjct: 121518 ttcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 509 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 115 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 174 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 175 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 |||||||||||||| |||||||| || ||||||| || || |||| |||||||||| Sbjct: 49 gaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggaga 108 Query: 64 ttcccaaataggtcaacct 82 ||||| |||||| |||||| Sbjct: 109 ttcccgaatagggcaacct 127
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 186 bits (94), Expect = 5e-44 Identities = 197/226 (87%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 452 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 512 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 ta---ga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 174 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 452 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 453 cccagtgggtagtgaaatagaacgtgaaaccgt 485 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 174 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 4 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 63 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 64 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 123 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 124 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 183 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 184 agcggcgagcgaaatgggagcagcctaaaccg 215 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 597
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 180 bits (91), Expect = 3e-42 Identities = 107/111 (96%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 442 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 501 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 502 gtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 552 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 454 ccagtgggtagtgaaatagaacgtgaaacc 483 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 87 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 88 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 147 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 148 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 207 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 208 ctaaacc 214 ||||||| Sbjct: 253 ctaaacc 259 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 622
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 454 ccagtgggtagtgaaatagaacgtgaaacc 483 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 129 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 188 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 189 cgagcgaaatgggagcagcctaaacc 214 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 454 ccagtgggtagtgaaatagaacgtgaaacc 483 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 28 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 87 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 88 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 147 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 148 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 207 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 208 ctaaacc 214 ||||||| Sbjct: 253 ctaaacc 259 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 622
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 337 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 396 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 397 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 456 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 457 gtgggtagtgaaatagaacgtgaaaccgt 485 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcga 556 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 454 ccagt-gggtagtgaaatagaacgtgaaaccgt 485 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 114 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 173 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 174 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 215 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 444
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 444
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 130 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 189 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 190 gagcgaaatgggagcagcctaaacc 214 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 444
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgtg 486 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 186 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 187 ggcgagcgaaatgggagcagcctaaacc 214 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 453 c 453 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 591 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 256 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 305 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 453 c 453 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 604 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 256 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 305 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 333 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 392 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 393 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 452 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 453 c 453 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 120 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 179 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 180 tagtagcggcgagcgaaatgggagcagcctaaaccg 215 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 5178 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 256 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 305 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 452 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 453 cccagt-gggtagtgaaatagaacgtgaaacc 483 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 452 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 453 cccagt-gggtagtgaaatagaacgtgaaacc 483 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 22 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 81 ||||| |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| Sbjct: 136542 cgaaacgcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaacc 136601 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 |||||||| || |||||| ||| | ||||||| |||| | ||||||||||||| Sbjct: 136602 ctttaaactaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatc 136661 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 136662 ttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtggg 136721 Query: 202 agcagcctaaaccg 215 | |||||||||||| Sbjct: 136722 aacagcctaaaccg 136735 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Minus Query: 22 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 81 ||||| |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| Sbjct: 49002 cgaaacgcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaacc 48943 Query: 82 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 141 |||||||| || |||||| ||| | ||||||| |||| | ||||||||||||| Sbjct: 48942 ctttaaactaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatc 48883 Query: 142 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 201 |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 48882 ttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtggg 48823 Query: 202 agcagcctaaaccg 215 | |||||||||||| Sbjct: 48822 aacagcctaaaccg 48809 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||| ||||||||||||||||| ||||||| |||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatag 137092 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 ||||||||| ||||||||||||||||| ||||||| |||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatag 48452
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 334 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 393 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643 Query: 394 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 453 |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagtaccc 703 Query: 454 ccagtgggtagtgaaatagaacgtgaaaccgt 485 | ||| ||||||||||||| ||||||||| Sbjct: 704 ctgtgggggagtgaaatagaacatgaaaccgt 735 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 115 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 174 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 175 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 212 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 563 |||||||||||||||||||||||||||| |||||| |||| Sbjct: 769 tgaccgcgtgcctgttgaagaatgagcctgcgacttatag 808 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,981,181 Number of Sequences: 3902068 Number of extensions: 3981181 Number of successful extensions: 117671 Number of sequences better than 10.0: 26620 Number of HSP's better than 10.0 without gapping: 26444 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 73507 Number of HSP's gapped (non-prelim): 42152 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
