Clone Name | basd2m15 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 870 bits (439), Expect = 0.0 Identities = 453/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119432 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 119373 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119372 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 119313 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119312 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 119253 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119252 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 119193 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119192 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 119133 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119132 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 119073 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119072 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 119013 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 119012 gtgataaaggaggt-gggggtgcaaagacagccag 118979 Score = 870 bits (439), Expect = 0.0 Identities = 453/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95462 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 95521 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95522 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 95581 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95582 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 95641 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95642 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 95701 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95702 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 95761 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95762 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 95821 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95822 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 95881 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 95882 gtgataaaggaggt-gggggtgcaaagacagccag 95915
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 118213 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 118154 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118153 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 118094 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118093 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 118034 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118033 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 117974 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117973 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 117914 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117913 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 117854 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117853 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 117794 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 117793 gtgataaaggaggt-gggggtgcaaagacagccag 117760
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119297 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 119238 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119237 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 119178 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119177 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 119118 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119117 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 119058 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119057 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118998 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118997 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 118938 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118937 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 118878 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 118877 gtgataaaggaggt-gggggtgcaaagacagccag 118844 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95859 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 95918 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95919 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 95978 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95979 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 96038 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96039 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 96098 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96099 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 96158 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96159 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 96218 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96219 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 96278 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 96279 gtgataaaggaggt-gggggtgcaaagacagccag 96312
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119297 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 119238 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119237 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 119178 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119177 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 119118 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119117 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 119058 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119057 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118998 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118997 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 118938 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118937 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 118878 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 118877 gtgataaaggaggt-gggggtgcaaagacagccag 118844 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95859 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 95918 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95919 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 95978 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95979 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 96038 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96039 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 96098 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96099 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 96158 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96159 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 96218 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96219 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 96278 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 96279 gtgataaaggaggt-gggggtgcaaagacagccag 96312
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119246 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 119187 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119186 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 119127 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119126 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 119067 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119066 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 119007 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119006 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118947 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118946 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 118887 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118886 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 118827 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 118826 gtgataaaggaggt-gggggtgcaaagacagccag 118793 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95804 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 95863 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95864 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 95923 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95924 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 95983 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95984 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 96043 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96044 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 96103 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96104 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 96163 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96164 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 96223 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 96224 gtgataaaggaggt-gggggtgcaaagacagccag 96257
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31508437 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 31508496 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508497 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 31508556 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508557 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 31508616 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508617 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 31508676 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508677 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 31508736 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508737 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 31508796 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508797 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 31508856 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 31508857 gtgataaaggaggt-gggggtgcaaagacagccag 31508890 Score = 196 bits (99), Expect = 5e-47 Identities = 106/107 (99%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 360 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 420 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccag 11513212 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 376 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 435 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 436 taaaggaggtggggg 450 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatcaccagctaaggccc 416 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 278 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 332 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 84159 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 84100 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84099 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 84040 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84039 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 83980 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83979 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 83920 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83919 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 83860 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83859 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 83800 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83799 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 83740 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 83739 gtgataaaggaggt-gggggtgcaaagacagccag 83706
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119266 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 119207 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119206 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 119147 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119146 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 119087 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119086 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 119027 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119026 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118967 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118966 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 118907 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118906 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 118847 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 118846 gtgataaaggaggt-gggggtgcaaagacagccag 118813 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95852 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 95911 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95912 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 95971 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95972 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 96031 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96032 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 96091 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96092 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 96151 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96152 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 96211 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96212 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 96271 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 96272 gtgataaaggaggt-gggggtgcaaagacagccag 96305
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 14626 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 14685 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14686 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 14745 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14746 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 14805 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14806 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 14865 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14866 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 14925 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14926 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 14985 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14986 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 15045 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 15046 gtgataaaggaggt-gggggtgcaaagacagccag 15079 Score = 839 bits (423), Expect = 0.0 Identities = 450/455 (98%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122901 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac- 122959 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122960 taggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 123019 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123020 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 123079 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123080 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 123139 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123140 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 123199 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123200 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 123259 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123260 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 123319 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 123320 gtgataaaggaggt-gggggtgcaaagacagccag 123353
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141434 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 141493 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141494 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 141553 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141554 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 141613 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141614 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 141673 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141674 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 141733 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141734 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 141793 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141794 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 141853 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 141854 gtgataaaggaggt-gggggtgcaaagacagccag 141887
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 94030 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 94089 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94090 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 94149 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94150 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 94209 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94210 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 94269 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94270 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 94329 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94330 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 94389 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94390 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 94449 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 94450 gtgataaaggaggt-gggggtgcaaagacagccag 94483
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20861 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 20920 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20921 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 20980 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20981 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 21040 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21041 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 21100 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21101 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 21160 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21161 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 21220 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21221 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 21280 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 21281 gtgataaaggaggt-gggggtgcaaagacagccag 21314 Score = 833 bits (420), Expect = 0.0 Identities = 450/456 (98%), Gaps = 3/456 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44257 cggagccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 44198 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44197 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 44138 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtg-aaatgccactcgaaccc 190 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44137 actgatgttgaagaatcagcggatgagttgtggttaggggtgtaaatgccactcgaaccc 44078 Query: 191 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggg 250 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44077 agagctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggg 44018 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44017 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 43958 Query: 311 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43957 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 43898 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43897 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 43838 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||||||||||||||| Sbjct: 43837 agtgataaaggaggt-gggggtgcaaagacagccag 43803
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 57985 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 57926 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57925 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 57866 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57865 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 57806 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57805 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 57746 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57745 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 57686 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57685 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 57626 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57625 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 57566 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 57565 gtgataaaggaggt-gggggtgcaaagacagccag 57532
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 886 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 827 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 767 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 707 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 647 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 587 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 527 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 467 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 466 gtgataaaggaggt-gggggtgcaaagacagccag 433
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 28094 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 28153 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28154 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 28213 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28214 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 28273 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28274 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 28333 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28334 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 28393 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28394 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 28453 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28454 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 28513 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 28514 gtgataaaggaggt-gggggtgcaaagacagccag 28547
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9268786 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 9268845 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268846 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 9268905 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268906 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 9268965 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268966 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 9269025 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269026 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 9269085 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269086 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 9269145 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269146 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 9269205 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 9269206 gtgataaaggaggt-gggggtgcaaagacagccag 9269239 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9056700 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 9056759 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056760 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 9056819 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056820 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 9056879 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056880 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 9056939 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056940 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 9056999 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057000 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 9057059 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057060 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 9057119 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 9057120 gtgataaaggaggt-gggggtgcaaagacagccag 9057153 Score = 854 bits (431), Expect = 0.0 Identities = 451/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9228286 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 9228345 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228346 taggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 9228405 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228406 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 9228465 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228466 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 9228525 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228526 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 9228585 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228586 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 9228645 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228646 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 9228705 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 9228706 gtgataaaggaggt-gggggtgcaaagacagccag 9228739 Score = 839 bits (423), Expect = 0.0 Identities = 450/455 (98%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9164875 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac- 9164933 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164934 taggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 9164993 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164994 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 9165053 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165054 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 9165113 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165114 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 9165173 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165174 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 9165233 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165234 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 9165293 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 9165294 gtgataaaggaggt-gggggtgcaaagacagccag 9165327
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19938771 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 19938830 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938831 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 19938890 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938891 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 19938950 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938951 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 19939010 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939011 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 19939070 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939071 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 19939130 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939131 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 19939190 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 19939191 gtgataaaggaggt-gggggtgcaaagacagccag 19939224 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10387638 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 10387697 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387698 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 10387757 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387758 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 10387817 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387818 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 10387877 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387878 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 10387937 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387938 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 10387997 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387998 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 10388057 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 10388058 gtgataaaggaggt-gggggtgcaaagacagccag 10388091 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10276660 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 10276601 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276600 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 10276541 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276540 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 10276481 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276480 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 10276421 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276420 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 10276361 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276360 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 10276301 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276300 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 10276241 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 10276240 gtgataaaggaggt-gggggtgcaaagacagccag 10276207 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 285 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 344 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 345 tcggccagtgagacgatgggggataagcttcatcgtcgagag 386 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31598953 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 31599012 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599013 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 31599072 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599073 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 31599132 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599133 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 31599192 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599193 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 31599252 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599253 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 31599312 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599313 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 31599372 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 31599373 gtgataaaggaggt-gggggtgcaaagacagccag 31599406 Score = 196 bits (99), Expect = 5e-47 Identities = 106/107 (99%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 360 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 420 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccag 11509975 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 376 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 435 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 436 taaaggaggtggggg 450 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatcaccagctaaggccc 416 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 278 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 332 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33526269 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 33526328 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526329 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 33526388 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526389 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 33526448 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526449 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 33526508 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526509 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 33526568 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526569 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 33526628 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526629 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 33526688 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 33526689 gtgataaaggaggt-gggggtgcaaagacagccag 33526722 Score = 151 bits (76), Expect = 2e-33 Identities = 89/92 (96%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 369 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 428 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 429 tcagtgataaaggaggtggggggtgcaaagac 460 ||||||||||||||||| |||||||||||||| Sbjct: 527811 tcagtgataaaggaggt-gggggtgcaaagac 527841
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 47272 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 47213 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47212 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 47153 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47152 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 47093 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47092 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 47033 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47032 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 46973 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46972 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 46913 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46912 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 46853 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 46852 gtgataaaggaggt-gggggtgcaaagacagccag 46819
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 71466 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 71525 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71526 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 71585 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71586 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 71645 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71646 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 71705 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71706 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 71765 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71766 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 71825 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71826 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 71885 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 71886 gtgataaaggaggt-gggggtgcaaagacagccag 71919
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123096 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 123037 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123036 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 122977 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122976 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 122917 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122916 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 122857 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122856 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 122797 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122796 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 122737 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122736 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 122677 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 122676 gtgataaaggaggt-gggggtgcaaagacagccag 122643 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99741 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 99800 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99801 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 99860 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99861 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 99920 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99921 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 99980 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99981 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 100040 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100041 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 100100 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100101 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 100160 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 100161 gtgataaaggaggt-gggggtgcaaagacagccag 100194
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 238 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 297 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 357 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 417 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 477 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 537 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 597 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 657 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 658 gtgataaaggaggt-gggggtgcaaagacagccag 691
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 492 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 552 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 612 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 672 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 732 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 792 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 852 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 853 gtgataaaggaggt-gggggtgcaaagacagccag 886
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 304 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 363 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 423 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 483 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 543 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 603 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 663 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 723 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 724 gtgataaaggaggt-gggggtgcaaagacagccag 757
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 435 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 494 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 554 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 614 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 674 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 734 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 794 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 854 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 855 gtgataaaggaggt-gggggtgcaaagacagccag 888
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 54 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 113 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 173 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 233 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 293 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 353 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 413 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 473 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 474 gtgataaaggaggt-gggggtgcaaagacagccag 507
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 254 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 313 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 373 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 433 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 493 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 553 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 613 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 673 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 674 gtgataaaggaggt-gggggtgcaaagacagccag 707
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 492 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 552 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 612 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 672 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 732 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 792 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 852 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 853 gtgataaaggaggt-gggggtgcaaagacagccag 886
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 435 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 494 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 554 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 614 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 674 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 734 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 794 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 854 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 855 gtgataaaggaggt-gggggtgcaaagacagccag 888
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 56 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 115 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 175 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 235 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 295 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 355 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 415 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 475 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 476 gtgataaaggaggt-gggggtgcaaagacagccag 509
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19950047 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 19950106 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950107 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 19950166 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950167 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 19950226 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950227 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 19950286 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950287 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 19950346 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950347 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 19950406 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950407 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 19950466 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 19950467 gtgataaaggaggt-gggggtgcaaagacagccag 19950500 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10393677 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 10393736 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393737 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 10393796 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393797 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 10393856 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393857 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 10393916 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393917 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 10393976 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393977 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 10394036 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394037 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 10394096 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 10394097 gtgataaaggaggt-gggggtgcaaagacagccag 10394130 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10282699 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 10282640 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282639 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 10282580 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282579 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 10282520 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282519 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 10282460 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282459 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 10282400 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282399 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 10282340 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282339 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 10282280 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 10282279 gtgataaaggaggt-gggggtgcaaagacagccag 10282246 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 285 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 344 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 345 tcggccagtgagacgatgggggataagcttcatcgtcgagag 386 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123813 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 123754 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123753 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 123694 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123693 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 123634 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123633 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 123574 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123573 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 123514 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123513 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 123454 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123453 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 123394 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 123393 gtgataaaggaggt-gggggtgcaaagacagccag 123360 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100418 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 100477 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100478 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 100537 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100538 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 100597 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100598 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 100657 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100658 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 100717 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100718 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 100777 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100778 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 100837 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 100838 gtgataaaggaggt-gggggtgcaaagacagccag 100871
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119240 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 119181 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119180 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 119121 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119120 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 119061 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119060 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 119001 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119000 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118941 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118940 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 118881 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118880 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 118821 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 118820 gtgataaaggaggt-gggggtgcaaagacagccag 118787 Score = 862 bits (435), Expect = 0.0 Identities = 452/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95799 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 95858 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95859 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 95918 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95919 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 95978 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95979 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 96038 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96039 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 96098 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96099 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 96158 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96159 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 96218 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 96219 gtgataaaggaggt-gggggtgcaaagacagccag 96252
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 854 bits (431), Expect = 0.0 Identities = 451/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9241495 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 9241436 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241435 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 9241376 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241375 tctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 9241316 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241315 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 9241256 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241255 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 9241196 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241195 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 9241136 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241135 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 9241076 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 9241075 gtgataaaggaggt-gggggtgcaaagacagccag 9241042 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 250 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 309 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 310 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 369 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 370 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 415 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 404 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggg 451 ||||||||| || ||||||||||||| ||| ||||| ||||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggg 3580338 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 403 accagctaaggcccctaaatgaccgctcagtgataaagga 442 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 854 bits (431), Expect = 0.0 Identities = 451/455 (99%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52708 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 52649 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52648 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 52589 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52588 tctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 52529 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52528 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 52469 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52468 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 52409 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52408 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 52349 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52348 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 52289 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||||||||||||||| Sbjct: 52288 gtgataaaggaggt-gggggtgcaaagacagccag 52255
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 846 bits (427), Expect = 0.0 Identities = 450/455 (98%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 432 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 491 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 492 tgggtgatctatccatgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccg 551 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 611 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 671 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 731 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 791 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 851 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||| ||||||| |||||||||||||||||||| Sbjct: 852 gtgatagaggaggt-gggggtgcaaagacagccag 885
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 839 bits (423), Expect = 0.0 Identities = 436/439 (99%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 545 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 604 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 664 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 724 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 784 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 844 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 904 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 964 Query: 432 gtgataaaggaggtggggg 450 |||||||||||||| |||| Sbjct: 965 gtgataaaggaggtagggg 983
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 837 bits (422), Expect = 0.0 Identities = 449/454 (98%), Gaps = 3/454 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123036 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 122977 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122976 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 122917 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122916 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 122857 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122856 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 122797 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122796 taaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaata 122738 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122737 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 122678 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122677 cttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctca 122618 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 |||||||||||||| ||||||||||||||||||| Sbjct: 122617 gtgataaaggaggt-gggggtgcaaagacagcca 122585 Score = 837 bits (422), Expect = 0.0 Identities = 449/454 (98%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99701 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 99760 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99761 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 99820 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99821 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 99880 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99881 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 99940 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99941 taaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaata 99999 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100000 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 100059 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100060 cttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctca 100119 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 |||||||||||||| ||||||||||||||||||| Sbjct: 100120 gtgataaaggaggt-gggggtgcaaagacagcca 100152
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 837 bits (422), Expect = 0.0 Identities = 449/454 (98%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6054 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 6113 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6114 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 6173 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6174 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 6233 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6234 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 6293 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6294 taaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaata 6352 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6353 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 6412 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 6413 cttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctca 6472 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 |||||||||||||| ||||||||||||||||||| Sbjct: 6473 gtgataaaggaggt-gggggtgcaaagacagcca 6505
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 837 bits (422), Expect = 0.0 Identities = 449/454 (98%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 642 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 701 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 761 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 821 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 881 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 882 taaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaata 940 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 1000 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1001 cttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctca 1060 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 |||||||||||||| ||||||||||||||||||| Sbjct: 1061 gtgataaaggaggt-gggggtgcaaagacagcca 1093
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 807 bits (407), Expect = 0.0 Identities = 417/419 (99%), Gaps = 1/419 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 430 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 489 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 549 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 609 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 669 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 729 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 789 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 799 bits (403), Expect = 0.0 Identities = 444/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122576 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 122517 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122516 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccg 122457 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122456 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 122397 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122396 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 122337 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122336 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaata 122277 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| Sbjct: 122276 ctagatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataag 122217 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122216 cttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctca 122157 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||| |||||||||||||||||||| Sbjct: 122156 atgataaaggaggt-gggggtgcaaagacagccag 122123
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 799 bits (403), Expect = 0.0 Identities = 444/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825117 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 12825058 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12825057 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccg 12824998 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824997 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 12824938 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824937 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 12824878 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12824877 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaata 12824818 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| Sbjct: 12824817 ctagatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataag 12824758 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12824757 cttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctca 12824698 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||| |||||||||||||||||||| Sbjct: 12824697 atgataaaggaggt-gggggtgcaaagacagccag 12824664
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 783 bits (395), Expect = 0.0 Identities = 442/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 131037 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 130978 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 130977 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 130918 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130917 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 130858 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130857 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 130798 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 130797 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 130738 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130737 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 130678 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130677 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 130618 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 130617 gtgataaaggaggt-aggggtgcagagacagccag 130584 Score = 783 bits (395), Expect = 0.0 Identities = 442/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 103598 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 103657 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 103658 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 103717 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103718 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 103777 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103778 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 103837 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 103838 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 103897 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103898 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 103957 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103958 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 104017 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 104018 gtgataaaggaggt-aggggtgcagagacagccag 104051
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 783 bits (395), Expect = 0.0 Identities = 442/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141477 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 141418 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 141417 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 141358 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141357 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 141298 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141297 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 141238 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 141237 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 141178 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141177 ctagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataag 141118 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141117 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 141058 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 141057 gtgataaaggaggt-aggggtgcagagacagccag 141024 Score = 783 bits (395), Expect = 0.0 Identities = 442/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 112180 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 112239 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 112240 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 112299 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112300 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 112359 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112360 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 112419 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 112420 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 112479 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112480 ctagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataag 112539 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112540 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 112599 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 112600 gtgataaaggaggt-aggggtgcagagacagccag 112633
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 783 bits (395), Expect = 0.0 Identities = 442/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 627 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 686 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 687 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 746 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 806 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 866 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 867 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 926 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 927 ctagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataag 986 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1046 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| ||||||||||||||||||| Sbjct: 1047 gtgataaaggaggt-aggggtgcaaagacagccag 1080
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 783 bits (395), Expect = 0.0 Identities = 442/455 (97%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 631 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 690 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 691 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 750 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 810 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 870 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 871 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 930 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 931 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 990 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1050 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 1051 gtgataaaggaggt-aggggtgcagagacagccag 1084
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 779 bits (393), Expect = 0.0 Identities = 403/405 (99%), Gaps = 1/405 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 638 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 697 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 757 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 817 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 877 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 937 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 997 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 416 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 cttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 138874 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 138815 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 138814 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 138755 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138754 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 138695 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138694 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 138635 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 138634 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 138575 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138574 ctagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataag 138515 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138514 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 138455 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 138454 gtgataaaggaggt-aggggtgcagagacagccag 138421 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 110223 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 110282 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 110283 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 110342 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110343 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 110402 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110403 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 110462 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 110463 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 110522 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110523 ctagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataag 110582 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110583 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 110642 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 110643 gtgataaaggaggt-aggggtgcagagacagccag 110676
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 132145 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 132086 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 132085 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 132026 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132025 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 131966 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131965 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 131906 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 131905 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 131846 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131845 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 131786 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 131785 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 131726 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 131725 gtgataaaggaggt-aggggtgcagagacagccag 131692 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 104733 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 104792 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 104793 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 104852 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104853 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 104912 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104913 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 104972 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 104973 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 105032 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105033 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 105092 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105093 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 105152 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 105153 gtgataaaggaggt-aggggtgcagagacagccag 105186
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 131161 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 131102 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 131101 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 131042 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131041 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 130982 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130981 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 130922 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 130921 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 130862 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130861 ctagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataag 130802 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130801 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 130742 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 130741 gtgataaaggaggt-aggggtgcagagacagccag 130708 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 102284 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 102343 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 102344 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 102403 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102404 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 102463 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102464 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 102523 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 102524 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 102583 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102584 ctagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataag 102643 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102644 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 102703 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 102704 gtgataaaggaggt-aggggtgcagagacagccag 102737
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 136308 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 136249 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 136248 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 136189 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136188 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 136129 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136128 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 136069 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 136068 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 136009 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136008 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 135949 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135948 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 135889 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 135888 gtgataaaggaggt-aggggtgcagagacagccag 135855 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 107249 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 107308 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 107309 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 107368 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107369 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107428 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107429 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107488 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 107489 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 107548 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107549 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 107608 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107609 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 107668 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 107669 gtgataaaggaggt-aggggtgcagagacagccag 107702
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 142249 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 142190 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142189 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccg 142130 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142129 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 142070 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142069 gagctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 142010 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 142009 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 141950 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141949 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 141890 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 141889 cttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 141830 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| ||||||||||||||||||| Sbjct: 141829 gtgataaaggaggt-aggggtgcaaagacagccag 141796 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 111079 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 111138 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111139 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccg 111198 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111199 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 111258 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111259 gagctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 111318 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 111319 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 111378 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111379 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 111438 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111439 cttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 111498 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| ||||||||||||||||||| Sbjct: 111499 gtgataaaggaggt-aggggtgcaaagacagccag 111532
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134916 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134857 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134856 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134797 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134796 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134737 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134736 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134677 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134676 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134617 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134616 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 134557 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134556 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 134497 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134496 gtgataaaggaggt-aggggtgcagagacagccag 134463 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106120 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106179 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106180 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106239 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106299 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106359 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106360 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106419 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106420 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 106479 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106539 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106540 gtgataaaggaggt-aggggtgcagagacagccag 106573
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135962 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135903 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135902 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135843 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135842 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135783 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135782 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135723 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 135722 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 135663 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135662 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 135603 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135602 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 135543 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 135542 gtgataaaggaggt-aggggtgcagagacagccag 135509 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106463 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106522 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106523 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106582 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106583 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106642 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106643 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106702 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106703 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106762 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106763 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 106822 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106823 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106882 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106883 gtgataaaggaggt-aggggtgcagagacagccag 106916
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135051 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134992 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134991 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134932 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134931 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134872 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134871 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134812 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134811 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134752 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134751 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 134692 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134691 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 134632 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134631 gtgataaaggaggt-aggggtgcagagacagccag 134598 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106292 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106351 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106352 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106411 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106412 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106471 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106472 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106531 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106532 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106591 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106592 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 106651 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106652 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106711 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106712 gtgataaaggaggt-aggggtgcagagacagccag 106745
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135049 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134990 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134989 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134930 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134929 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134870 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134869 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134810 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134809 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134750 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134749 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 134690 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134689 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 134630 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134629 gtgataaaggaggt-aggggtgcagagacagccag 134596 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106289 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106348 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106349 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106408 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106409 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106468 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106528 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106529 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106588 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106589 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 106648 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106649 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106708 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106709 gtgataaaggaggt-aggggtgcagagacagccag 106742
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134961 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134902 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134901 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134842 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134841 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134782 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134722 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134721 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134662 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134661 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 134602 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134601 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 134542 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134541 gtgataaaggaggt-aggggtgcagagacagccag 134508 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106167 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106226 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106227 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106286 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106287 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106346 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106347 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106406 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106407 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106466 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106467 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 106526 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106527 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106586 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106587 gtgataaaggaggt-aggggtgcagagacagccag 106620
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 775 bits (391), Expect = 0.0 Identities = 442/455 (97%), Gaps = 3/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133592 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 133533 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 133532 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 133473 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133472 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 133413 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133412 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctagggg 133353 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 133352 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 133293 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 133292 ctagatatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggggataag 133234 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133233 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 133174 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 133173 gtgataaaggaggt-aggggtgcagagacagccag 133140 Score = 775 bits (391), Expect = 0.0 Identities = 442/455 (97%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104379 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 104438 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 104439 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 104498 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104499 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 104558 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104559 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctagggg 104618 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 104619 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 104678 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104679 ctagatatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggggataag 104737 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104738 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 104797 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 104798 gtgataaaggaggt-aggggtgcagagacagccag 104831
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 132138 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 132079 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 132078 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 132019 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132018 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 131959 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131958 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 131899 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 131898 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 131839 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131838 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 131779 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 131778 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 131719 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 131718 gtgataaaggaggt-aggggtgcagagacagccag 131685 Score = 775 bits (391), Expect = 0.0 Identities = 441/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 104731 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 104790 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 104791 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 104850 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104851 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 104910 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104911 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 104970 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 104971 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 105030 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105031 ctagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 105090 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105091 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 105150 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 105151 gtgataaaggaggt-aggggtgcagagacagccag 105184
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135670 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135611 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135610 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135551 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135550 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135491 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135490 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135431 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 135430 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 135371 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135370 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 135311 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135310 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 135251 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 135250 gtgataaaggaggt-aggggtgcagagacagccag 135217 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106960 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 107019 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 107020 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 107079 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107080 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107139 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107140 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107199 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 107200 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 107259 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107260 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 107319 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107320 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 107379 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 107380 gtgataaaggaggt-aggggtgcagagacagccag 107413
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 135271 cggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 135212 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135211 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135152 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135151 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135092 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135091 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135032 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 135031 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134972 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134971 ctagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 134912 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134911 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 134852 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134851 gtgataaaggaggt-aggggtgcagagacagccag 134818 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 106635 cggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 106694 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106695 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106754 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106755 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106814 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106815 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106874 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106875 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106934 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106935 ctagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 106994 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106995 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 107054 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 107055 gtgataaaggaggt-aggggtgcagagacagccag 107088
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2154 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 2213 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 2214 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 2273 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2274 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 2333 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 2393 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2394 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 2453 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2454 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 2513 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2514 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 2573 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 2574 gtgataaaggaggt-aggggtgcagagacagccag 2607
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 636 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 695 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 696 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 755 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 815 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 875 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 876 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 935 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 ctagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataag 995 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1055 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 1056 gtgataaaggaggt-aggggtgcagagacagccag 1089
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 611 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 670 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 671 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 730 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 790 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 850 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 851 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 910 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 ctagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataag 970 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 971 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgccca 1030 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 1031 gtgataaaggaggt-aggggtgcagagacagccag 1064
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 650 cggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacc 709 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 710 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 769 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 829 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 889 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 890 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 949 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 950 ctagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataag 1009 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1069 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 1070 gtgataaaggaggt-aggggtgcagagacagccag 1103
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 135550 cggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 135491 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135490 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135431 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135430 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135371 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135370 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135311 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 135310 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 135251 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135250 ctagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 135191 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135190 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 135131 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 135130 gtgataaaggaggt-aggggtgcagagacagccag 135097 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 106857 cggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 106916 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106917 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106976 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106977 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107036 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107037 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107096 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 107097 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 107156 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107157 ctagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 107216 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107217 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 107276 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 107277 gtgataaaggaggt-aggggtgcagagacagccag 107310
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135668 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135609 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135608 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135549 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135548 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135489 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135488 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135429 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 135428 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 135369 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135368 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 135309 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135308 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 135249 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 135248 gtgataaaggaggt-aggggtgcagagacagccag 135215 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106958 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 107017 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 107018 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 107077 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107078 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107137 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107138 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107197 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 107198 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 107257 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107258 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 107317 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107318 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 107377 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 107378 gtgataaaggaggt-aggggtgcagagacagccag 107411
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135399 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135340 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135339 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135280 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135279 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135220 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135219 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135160 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 135159 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 135100 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135099 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 135040 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135039 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 134980 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134979 gtgataaaggaggt-aggggtgcagagacagccag 134946 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106739 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106798 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106799 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106858 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106859 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106918 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106919 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106978 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106979 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 107038 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107039 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 107098 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107099 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 107158 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 107159 gtgataaaggaggt-aggggtgcagagacagccag 107192
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 139079 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 139020 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 139019 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 138960 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138959 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 138900 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138899 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 138840 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 138839 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 138780 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138779 ctagatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataag 138720 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138719 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 138660 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 138659 gtgataaaggaggt-aggggtgcagagacagccag 138626 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 110220 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 110279 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 110280 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 110339 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110340 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 110399 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110400 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 110459 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 110460 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 110519 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110520 ctagatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataag 110579 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110580 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 110639 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 110640 gtgataaaggaggt-aggggtgcagagacagccag 110673
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134928 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134869 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134868 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134809 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134808 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134749 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134748 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134689 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134688 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134629 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134628 atagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 134569 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134568 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 134509 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 134508 gtgataaaggaggt-aggggtgcagagacagccag 134475 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106134 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106193 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106194 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106253 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106254 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106313 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106314 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106373 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106374 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106433 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106434 atagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 106493 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106494 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106553 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106554 gtgataaaggaggt-aggggtgcagagacagccag 106587
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 767 bits (387), Expect = 0.0 Identities = 440/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 727 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 786 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 787 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 846 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 906 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 966 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 967 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 1026 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1027 ctagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataag 1086 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1087 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctca 1146 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 1147 gtgataaaggaggt-aggggtgcagagacagccag 1180
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 759 bits (383), Expect = 0.0 Identities = 437/452 (96%), Gaps = 6/452 (1%) Strand = Plus / Minus Query: 16 agccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 74 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 127230 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 127171 Query: 75 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 134 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 127170 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 127111 Query: 135 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127110 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 127051 Query: 195 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127050 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 126991 Query: 255 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 314 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 126990 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 126931 Query: 315 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 374 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126930 gatatgacccca----aacaggggtcaaggtcggccagtgagacgatgggggataagctt 126875 Query: 375 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126874 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 126815 Query: 435 ataaaggaggtggggggtgcaaagacagccag 466 ||||||||||| |||||||| |||||||||| Sbjct: 126814 ataaaggaggt-aggggtgcagagacagccag 126784 Score = 759 bits (383), Expect = 0.0 Identities = 437/452 (96%), Gaps = 6/452 (1%) Strand = Plus / Plus Query: 16 agccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 74 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107692 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 107751 Query: 75 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 134 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107752 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 107811 Query: 135 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107812 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 107871 Query: 195 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107872 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 107931 Query: 255 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 314 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107932 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107991 Query: 315 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 374 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107992 gatatgacccca----aacaggggtcaaggtcggccagtgagacgatgggggataagctt 108047 Query: 375 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108048 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 108107 Query: 435 ataaaggaggtggggggtgcaaagacagccag 466 ||||||||||| |||||||| |||||||||| Sbjct: 108108 ataaaggaggt-aggggtgcagagacagccag 108138
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 753 bits (380), Expect = 0.0 Identities = 442/460 (96%), Gaps = 7/460 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 138955 cggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 138896 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 138895 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 138836 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138835 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 138776 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138775 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 138716 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 138715 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 138656 Query: 312 ctagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatggggg 366 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138655 ctagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatggggg 138596 Query: 367 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138595 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 138536 Query: 427 gctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||| |||||||| |||||||||| Sbjct: 138535 gctcagtgataaaggaggt-aggggtgcagagacagccag 138497 Score = 753 bits (380), Expect = 0.0 Identities = 442/460 (96%), Gaps = 7/460 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 110990 cggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 111049 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 111050 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 111109 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111110 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 111169 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111170 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 111229 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 111230 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 111289 Query: 312 ctagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatggggg 366 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111290 ctagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatggggg 111349 Query: 367 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111350 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 111409 Query: 427 gctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||| |||||||| |||||||||| Sbjct: 111410 gctcagtgataaaggaggt-aggggtgcagagacagccag 111448
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 751 bits (379), Expect = 0.0 Identities = 438/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 629 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 688 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 689 tgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 748 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 808 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 868 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 869 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 928 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 929 ctagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataag 988 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1048 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 1049 gtgataaaggaggt-aggggtgcagagacagccag 1082
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 751 bits (379), Expect = 0.0 Identities = 438/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 132368 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 132309 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 132308 tgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 132249 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132248 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 132189 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132188 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 132129 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 132128 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 132069 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 132068 ctagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataag 132009 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132008 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 131949 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 131948 gtgataaaggaggt-aggggtgcagagacagccag 131915 Score = 751 bits (379), Expect = 0.0 Identities = 438/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 104396 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 104455 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 104456 tgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 104515 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104516 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 104575 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104576 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 104635 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 104636 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 104695 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 104696 ctagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataag 104755 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104756 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 104815 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 104816 gtgataaaggaggt-aggggtgcagagacagccag 104849
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 751 bits (379), Expect = 0.0 Identities = 425/439 (96%), Gaps = 1/439 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 131237 cggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacc 131178 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 131177 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 131118 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131117 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 131058 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131057 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctagggg 130998 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 130997 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 130938 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 130937 ctagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataag 130878 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130877 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 130818 Query: 432 gtgataaaggaggtggggg 450 |||||||||||||| |||| Sbjct: 130817 gtgataaaggaggtagggg 130799 Score = 751 bits (379), Expect = 0.0 Identities = 425/439 (96%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 104157 cggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacc 104216 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 104217 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 104276 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104277 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 104336 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104337 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctagggg 104396 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 104397 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 104456 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104457 ctagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataag 104516 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104517 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 104576 Query: 432 gtgataaaggaggtggggg 450 |||||||||||||| |||| Sbjct: 104577 gtgataaaggaggtagggg 104595
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 751 bits (379), Expect = 0.0 Identities = 438/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 133329 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 133270 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 133269 tgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 133210 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133209 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 133150 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133149 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 133090 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 133089 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 133030 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 133029 ctagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataag 132970 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132969 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 132910 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 132909 gtgataaaggaggt-aggggtgcagagacagccag 132876 Score = 751 bits (379), Expect = 0.0 Identities = 438/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 105320 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 105379 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 105380 tgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 105439 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105440 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 105499 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105500 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 105559 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 105560 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 105619 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 105620 ctagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataag 105679 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105680 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 105739 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 105740 gtgataaaggaggt-aggggtgcagagacagccag 105773
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 749 bits (378), Expect = 0.0 Identities = 437/454 (96%), Gaps = 2/454 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 649 cggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacc 708 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 709 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 768 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 828 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 888 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 889 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 948 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 949 ctagatatgacctcaaaataacaggggttaaggtcggccagtgagaccatgggggataag 1008 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 cttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1068 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 |||||||||||||| |||||||| ||||||||| Sbjct: 1069 gtgataaaggaggt-aggggtgcagagacagcca 1101
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 745 bits (376), Expect = 0.0 Identities = 439/456 (96%), Gaps = 3/456 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1125 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 1184 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1185 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccg 1244 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1245 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 1304 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1305 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 1364 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 1365 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 1424 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat-gggggataa 370 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1425 ctagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggggataa 1484 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1485 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 1544 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||| |||||||||| Sbjct: 1545 agtgataaaggaggt-aggggtgcagagacagccag 1579
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 743 bits (375), Expect = 0.0 Identities = 437/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 129900 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 129841 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 129840 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 129781 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129780 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 129721 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 129720 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctagggg 129661 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 129660 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 129601 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 129600 ctagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataag 129541 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 129540 cttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctca 129481 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 129480 gtgataaaggaggt-aggggtgcagagacagccag 129447 Score = 743 bits (375), Expect = 0.0 Identities = 437/455 (96%), Gaps = 2/455 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 102556 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 102615 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 102616 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 102675 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102676 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 102735 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102736 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctagggg 102795 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 102796 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 102855 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 102856 ctagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataag 102915 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102916 cttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctca 102975 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 102976 gtgataaaggaggt-aggggtgcagagacagccag 103009
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 741 bits (374), Expect = 0.0 Identities = 436/454 (96%), Gaps = 2/454 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 638 cggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacc 697 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct: 698 tgggtgatctatccatgaccaggatggagcttgggtgaaactaagtggaggtccgaaccg 757 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 817 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 877 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 878 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 937 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 938 ctagatatgacctcaaaataacaggggttaaggtcggccagtgagacaatgggggataag 997 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1057 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 ||||||||||||| |||||||| ||||||||| Sbjct: 1058 atgataaaggaggt-aggggtgcacagacagcca 1090
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 735 bits (371), Expect = 0.0 Identities = 433/451 (96%), Gaps = 2/451 (0%) Strand = Plus / Plus Query: 16 agccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 74 |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 653 agccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgg 712 Query: 75 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 134 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 713 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 772 Query: 135 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 832 Query: 195 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 833 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaa 892 Query: 255 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 314 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 893 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 952 Query: 315 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 374 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 953 aatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagctt 1012 Query: 375 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 434 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 catcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1072 Query: 435 ataaaggaggtggggggtgcaaagacagcca 465 ||||||||||| |||||||| ||||||||| Sbjct: 1073 ataaaggaggt-aggggtgcacagacagcca 1102
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 731 bits (369), Expect = 0.0 Identities = 435/455 (95%), Gaps = 9/455 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134354 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134295 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134294 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134235 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134234 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134175 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134174 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134115 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134114 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134055 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134054 ctagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataag 134002 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134001 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 133942 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 133941 gtgataaaggaggt-aggggtgcagagacagccag 133908 Score = 731 bits (369), Expect = 0.0 Identities = 435/455 (95%), Gaps = 9/455 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 105928 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 105987 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 105988 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106047 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106107 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106108 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106167 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106168 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106227 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106228 ctagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataag 106280 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106281 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 106340 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 106341 gtgataaaggaggt-aggggtgcagagacagccag 106374
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 731 bits (369), Expect = 0.0 Identities = 440/457 (96%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2398 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 2457 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg-tccgaacc 130 |||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||| Sbjct: 2458 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtccgaacc 2517 Query: 131 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg-ccactcgaacc 189 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2518 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatggccactcgaacc 2577 Query: 190 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagg 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2578 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagg 2637 Query: 250 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 309 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2638 ggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaa 2697 Query: 310 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 369 ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2698 tactagatatgactc-aaaataacaggggtcaaggtcggctagtgagacgatgggggata 2756 Query: 370 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 429 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2757 agcttcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgaccgct 2816 Query: 430 cagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||||| |||||||| |||||||||| Sbjct: 2817 cagtgataaaggaggt-aggggtgcagagacagccag 2852
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 708 bits (357), Expect = 0.0 Identities = 432/455 (94%), Gaps = 9/455 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 115 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 174 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 175 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 234 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 294 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 295 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctagggg 354 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 355 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 414 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||| || || |||| ||||||||||||||||||||||||||||||||||| Sbjct: 415 ctagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataag 467 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 527 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 528 gtgataaaggaggt-aggggtgcagagacagccag 561
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 708 bits (357), Expect = 0.0 Identities = 432/455 (94%), Gaps = 9/455 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 139730 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 139671 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 139670 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 139611 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139610 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 139551 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139550 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctagggg 139491 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 139490 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 139431 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||| || || |||| ||||||||||||||||||||||||||||||||||| Sbjct: 139430 ctagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataag 139378 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139377 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 139318 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 139317 gtgataaaggaggt-aggggtgcagagacagccag 139284 Score = 708 bits (357), Expect = 0.0 Identities = 432/455 (94%), Gaps = 9/455 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 110330 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 110389 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 110390 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 110449 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110450 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 110509 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110510 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctagggg 110569 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 110570 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 110629 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||| || || |||| ||||||||||||||||||||||||||||||||||| Sbjct: 110630 ctagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataag 110682 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110683 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 110742 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 110743 gtgataaaggaggt-aggggtgcagagacagccag 110776
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 706 bits (356), Expect = 0.0 Identities = 433/456 (94%), Gaps = 2/456 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 52056 cggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacc 51997 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 51996 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 51937 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51936 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 51877 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51876 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 51817 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||| Sbjct: 51816 taaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaata 51757 Query: 312 ctag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 |||| |||||||| | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 51756 ctagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataa 51697 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 51696 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctc 51637 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||| |||||||||| Sbjct: 51636 agtgataaaggaggttaggggtgcagagacagccag 51601 Score = 706 bits (356), Expect = 0.0 Identities = 433/456 (94%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 37772 cggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacc 37831 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 37832 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 37891 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37892 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 37951 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37952 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 38011 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||| Sbjct: 38012 taaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaata 38071 Query: 312 ctag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 |||| |||||||| | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 38072 ctagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataa 38131 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 38132 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctc 38191 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||| |||||||||| Sbjct: 38192 agtgataaaggaggttaggggtgcagagacagccag 38227
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 706 bits (356), Expect = 0.0 Identities = 433/456 (94%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 4700 cggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacc 4759 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 4760 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 4819 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 4879 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4880 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 4939 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||| Sbjct: 4940 taaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaata 4999 Query: 312 ctag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 |||| |||||||| | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 5000 ctagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataa 5059 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 5060 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctc 5119 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||| |||||||||| Sbjct: 5120 agtgataaaggaggttaggggtgcagagacagccag 5155
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 704 bits (355), Expect = 0.0 Identities = 436/458 (95%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 |||| |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 644 cggaaccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 703 Query: 72 t--gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 129 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 704 ctggggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaac 763 Query: 130 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 823 Query: 190 cagagctagctggttctcccc-gaaatgcgttgaggcgcagcagttgactggacatctag 248 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 824 cagagctagctggttctcccccgaaatgcgttgaggcgcagcagttgactggacatctag 883 Query: 249 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 308 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 884 gggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctga 943 Query: 309 atactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggat 368 ||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 944 atactagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatgggggat 1003 Query: 369 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 428 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 1004 aagcttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatgatcgc 1063 Query: 429 tcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||| |||||||| |||||||||| Sbjct: 1064 tcagtgataaaggaggt-aggggtgcagagacagccag 1100
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 704 bits (355), Expect = 0.0 Identities = 431/454 (94%), Gaps = 8/454 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 650 cggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacc 709 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 710 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 769 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 829 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 889 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 890 taaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaata 949 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| | |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 950 ctagatatgacc------tcacaggggttaaggtcggccaatgagacgatgggggataag 1003 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 cttcatcttccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 1063 Query: 432 gtgataaaggaggtggggggtgcaaagacagcca 465 |||||||||||||| |||||||||||||||||| Sbjct: 1064 gtgataaaggaggt-aggggtgcaaagacagcca 1096
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 700 bits (353), Expect = 0.0 Identities = 431/455 (94%), Gaps = 9/455 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 131 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 190 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 191 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 250 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 251 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccgctcgaaccca 310 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 311 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctagggg 370 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 371 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 430 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||| || || |||| ||||||||||||||||||||||||||||||||||| Sbjct: 431 ctagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataag 483 Query: 372 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 543 Query: 432 gtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||| |||||||| |||||||||| Sbjct: 544 gtgataaaggaggt-aggggtgcagagacagccag 577
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 698 bits (352), Expect = 0.0 Identities = 434/456 (95%), Gaps = 4/456 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 177474 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 177533 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 177534 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga-ccg 177592 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 177593 actgatgttgaagaatcagcgggtgagttgtggttaggggtgaaatgccactcgcaccca 177652 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177653 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 177712 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 177713 taaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 177772 Query: 312 ctagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataa 370 |||||||||||| ||||||| | |||| |||||||||| |||||||||||||||||||| Sbjct: 177773 ctagatatgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggggataa 177832 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 177833 gcttcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgaccgctc 177892 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||| |||||||||| Sbjct: 177893 agtgataaaggaggt-aggggtgcagagacagccag 177927 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 411 aggcccctaaatgaccgctcag 432 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 690 bits (348), Expect = 0.0 Identities = 432/456 (94%), Gaps = 3/456 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||| || ||||| | |||||||||||||||||||||||||| Sbjct: 629 cggagccatagcgaaagcgagtattcataggactattgtcactgcttatggacccgaacc 688 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 689 tgggtgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccg 748 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 808 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 868 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||| Sbjct: 869 taaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaata 928 Query: 312 ctag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 |||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 929 ctagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggggataa 988 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 989 gcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgatcgctc 1048 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||| |||||||| |||||||||| Sbjct: 1049 agtgataaaggaggt-aggggtgcagagacagccag 1083
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 676 bits (341), Expect = 0.0 Identities = 432/457 (94%), Gaps = 4/457 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 632 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacc 691 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 692 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 751 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 811 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 812 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 871 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 872 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 931 Query: 311 actagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggata 369 ||||||||||| || |||||||||||| | |||||| ||||||||||| ||||||||| Sbjct: 932 actagatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggggata 991 Query: 370 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 429 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 992 agcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgct 1051 Query: 430 cagtgataaaggaggtggggggtgcaaagacagccag 466 ||||| |||||||||| || |||||||||||||||| Sbjct: 1052 cagtggtaaaggaggt-aggagtgcaaagacagccag 1087
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 656 bits (331), Expect = 0.0 Identities = 341/343 (99%), Gaps = 1/343 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 343 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 284 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 224 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 164 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 104 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 44 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtg 354 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 ctagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 644 bits (325), Expect = 0.0 Identities = 428/457 (93%), Gaps = 4/457 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 117517 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacc 117458 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 117457 tgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 117398 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117397 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 117338 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 117337 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 117278 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117277 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 117218 Query: 311 actagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggata 369 ||||||||||| || |||||| | ||||| | |||| ||||||||||| ||||||||| Sbjct: 117217 actagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggata 117158 Query: 370 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 429 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117157 agcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgct 117098 Query: 430 cagtgataaaggaggtggggggtgcaaagacagccag 466 |||| |||||||||| || |||||||||||||||| Sbjct: 117097 aagtggtaaaggaggt-aggagtgcaaagacagccag 117062 Score = 644 bits (325), Expect = 0.0 Identities = 428/457 (93%), Gaps = 4/457 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 90585 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacc 90644 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 90645 tgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 90704 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90705 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 90764 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 90765 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 90824 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90825 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 90884 Query: 311 actagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggata 369 ||||||||||| || |||||| | ||||| | |||| ||||||||||| ||||||||| Sbjct: 90885 actagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggata 90944 Query: 370 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 429 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90945 agcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgct 91004 Query: 430 cagtgataaaggaggtggggggtgcaaagacagccag 466 |||| |||||||||| || |||||||||||||||| Sbjct: 91005 aagtggtaaaggaggt-aggagtgcaaagacagccag 91040
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 636 bits (321), Expect = e-179 Identities = 427/457 (93%), Gaps = 4/457 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcg-aagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||| ||||||||||| | |||| ||||||||| |||||||||||||||| Sbjct: 632 cggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacccgaacc 691 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| Sbjct: 692 tgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtccgaaccg 751 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 811 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 812 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 871 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 872 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 931 Query: 311 actagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggata 369 ||||||||||| | |||||| |||| | | |||| ||||||||||| ||||||||| Sbjct: 932 actagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgggggata 991 Query: 370 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 992 agcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgct 1051 Query: 430 cagtgataaaggaggtggggggtgcaaagacagccag 466 ||||| |||||||||| || |||||||||||||||| Sbjct: 1052 cagtggtaaaggaggt-aggagtgcaaagacagccag 1087
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 630 bits (318), Expect = e-178 Identities = 407/432 (94%), Gaps = 6/432 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcga-agcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 |||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 86895 cggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 86954 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 86955 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 87014 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87015 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 87074 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggg 250 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87075 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggg 87134 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 87135 gtaaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaat 87194 Query: 311 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 ||||||| || ||| ||||| |||||| | |||| |||||||||||||||||||||| Sbjct: 87195 actagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatgggggataa 87250 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 87251 gcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctc 87310 Query: 431 agtgataaagga 442 |||||| ||||| Sbjct: 87311 agtgatgaagga 87322
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 630 bits (318), Expect = e-178 Identities = 363/377 (96%), Gaps = 2/377 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa--gcgagtcttaatagggcgattgtcactgcttatggacccgaac 70 ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 364812 cggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgcttatggacccgaac 364871 Query: 71 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 130 |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 364872 ctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaacc 364931 Query: 131 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364932 gactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 364991 Query: 191 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364992 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggg 365051 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 365052 gtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaat 365111 Query: 311 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 365112 actagatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtgggggataa 365171 Query: 371 gcttcatcgtcgagagg 387 ||||||||||||||||| Sbjct: 365172 gcttcatcgtcgagagg 365188 Score = 111 bits (56), Expect = 2e-21 Identities = 78/84 (92%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 382 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 441 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 442 aggtggggggtgcaaagacagcca 465 |||| |||||||| ||||||||| Sbjct: 129287 aggt-aggggtgcagagacagcca 129265 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 628 bits (317), Expect = e-177 Identities = 431/462 (93%), Gaps = 9/462 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 145927 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 145868 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 145867 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 145808 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 145807 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccca 145748 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145747 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 145688 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 145687 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 145628 Query: 311 actagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatggg 364 ||||| ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||| Sbjct: 145627 actaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggg 145568 Query: 365 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 424 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 145567 ggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatga 145508 Query: 425 ccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||| | |||||||| || ||||| |||||||||| Sbjct: 145507 ccgctcagtggtgaaggaggt-aggagtgcagagacagccag 145467 Score = 628 bits (317), Expect = e-177 Identities = 431/462 (93%), Gaps = 9/462 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 112535 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 112594 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 112595 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 112654 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112655 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccca 112714 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112715 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 112774 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112775 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 112834 Query: 311 actagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatggg 364 ||||| ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||| Sbjct: 112835 actaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggg 112894 Query: 365 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 424 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 112895 ggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatga 112954 Query: 425 ccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||| | |||||||| || ||||| |||||||||| Sbjct: 112955 ccgctcagtggtgaaggaggt-aggagtgcagagacagccag 112995
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 624 bits (315), Expect = e-176 Identities = 352/363 (96%), Gaps = 1/363 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 46887 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 46946 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 46947 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 47006 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47007 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 47066 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47067 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 47126 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 47127 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 47186 Query: 312 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 371 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47187 ctagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataag 47246 Query: 372 ctt 374 ||| Sbjct: 47247 ctt 47249
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 605 bits (305), Expect = e-170 Identities = 404/432 (93%), Gaps = 5/432 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcga-agcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 |||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 88981 cggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 89040 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 89041 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 89100 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89101 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 89160 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggg 250 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89161 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggg 89220 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct: 89221 gtaaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctgaat 89280 Query: 311 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 ||||||| | ||||| | || ||||| | |||| |||||||||||||||||||||| Sbjct: 89281 actagat-taccccaata--aaagggggtaagggtcaaccagtgagacgatgggggataa 89337 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 89338 gcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctc 89397 Query: 431 agtgataaagga 442 |||||| ||||| Sbjct: 89398 agtgatgaagga 89409
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 603 bits (304), Expect = e-169 Identities = 421/456 (92%), Gaps = 3/456 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 127809 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacc 127750 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| Sbjct: 127749 tgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccg 127690 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127689 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 127630 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 |||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| Sbjct: 127629 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggg 127570 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 127569 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaat 127510 Query: 311 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 ||||| |||||||| || ||| ||| | |||| |||||||||||||||||||||| Sbjct: 127509 actaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataa 127450 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct: 127449 gcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctc 127390 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 |||| |||||||||| || |||||||||||||||| Sbjct: 127389 agtggtaaaggaggt-aggagtgcaaagacagccag 127355 Score = 603 bits (304), Expect = e-169 Identities = 421/456 (92%), Gaps = 3/456 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 95638 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacc 95697 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| Sbjct: 95698 tgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccg 95757 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95758 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 95817 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 |||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| Sbjct: 95818 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggg 95877 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95878 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaat 95937 Query: 311 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 370 ||||| |||||||| || ||| ||| | |||| |||||||||||||||||||||| Sbjct: 95938 actaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataa 95997 Query: 371 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 430 ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct: 95998 gcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctc 96057 Query: 431 agtgataaaggaggtggggggtgcaaagacagccag 466 |||| |||||||||| || |||||||||||||||| Sbjct: 96058 agtggtaaaggaggt-aggagtgcaaagacagccag 96092
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 581 bits (293), Expect = e-163 Identities = 420/457 (91%), Gaps = 4/457 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| || |||||| | |||| |||||||||||||||||||||||||| Sbjct: 636 cggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaacc 695 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 696 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 755 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 815 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 816 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggg 875 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 876 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 935 Query: 311 actagatatgacccaaaaataacag-gggtcaaggtcggccagtgagacgatgggggata 369 ||| |||| ||| | ||||| || | || | |||| |||||||||| ||||||||| Sbjct: 936 actggataggactccctaataatagagagtaagggtcaaccagtgagacagtgggggata 995 Query: 370 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 429 |||||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||| Sbjct: 996 agcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgaccgct 1055 Query: 430 cagtgataaaggaggtggggggtgcaaagacagccag 466 |||| |||||||||| || |||||||||||||||| Sbjct: 1056 aagtggtaaaggaggt-aggagtgcaaagacagccag 1091
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 511 bits (258), Expect = e-142 Identities = 299/310 (96%), Gaps = 2/310 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 4521 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 4580 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 4581 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 4640 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 4700 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4701 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 4760 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4761 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 4820 Query: 311 actagatatg 320 ||||| |||| Sbjct: 4821 actaggtatg 4830 Score = 167 bits (84), Expect = 4e-38 Identities = 115/124 (92%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aagagtgcaaagacag 4976 Query: 463 ccag 466 |||| Sbjct: 4977 ccag 4980
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 511 bits (258), Expect = e-142 Identities = 299/310 (96%), Gaps = 2/310 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 631 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 690 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 691 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 750 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 810 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 811 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 870 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 871 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 930 Query: 311 actagatatg 320 ||||| |||| Sbjct: 931 actaggtatg 940 Score = 167 bits (84), Expect = 4e-38 Identities = 115/124 (92%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aagagtgcaaagacag 1086 Query: 463 ccag 466 |||| Sbjct: 1087 ccag 1090
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 511 bits (258), Expect = e-142 Identities = 299/310 (96%), Gaps = 2/310 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 150614 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 150555 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 150554 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 150495 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150494 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 150435 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150434 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 150375 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 150374 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 150315 Query: 311 actagatatg 320 ||||| |||| Sbjct: 150314 actaggtatg 150305 Score = 511 bits (258), Expect = e-142 Identities = 299/310 (96%), Gaps = 2/310 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 118052 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 118111 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 118112 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 118171 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118172 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 118231 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118232 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 118291 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118292 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 118351 Query: 311 actagatatg 320 ||||| |||| Sbjct: 118352 actaggtatg 118361 Score = 167 bits (84), Expect = 4e-38 Identities = 115/124 (92%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aagagtgcaaagacag 150159 Query: 463 ccag 466 |||| Sbjct: 150158 ccag 150155 Score = 167 bits (84), Expect = 4e-38 Identities = 115/124 (92%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aagagtgcaaagacag 118507 Query: 463 ccag 466 |||| Sbjct: 118508 ccag 118511
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 511 bits (258), Expect = e-142 Identities = 299/310 (96%), Gaps = 2/310 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 631 cggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacc 690 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 691 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 750 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 810 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 811 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 870 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 871 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 930 Query: 311 actagatatg 320 ||||| |||| Sbjct: 931 actaggtatg 940 Score = 167 bits (84), Expect = 4e-38 Identities = 115/124 (92%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aagagtgcaaagacag 1086 Query: 463 ccag 466 |||| Sbjct: 1087 ccag 1090
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 509 bits (257), Expect = e-141 Identities = 295/305 (96%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 115579 cggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacc 115520 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 115519 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 115460 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115459 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 115400 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 115399 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 115340 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115339 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 115280 Query: 311 actag 315 ||||| Sbjct: 115279 actag 115275 Score = 509 bits (257), Expect = e-141 Identities = 295/305 (96%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 86541 cggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacc 86600 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 86601 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 86660 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86661 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 86720 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86721 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggg 86780 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86781 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 86840 Query: 311 actag 315 ||||| Sbjct: 86841 actag 86845 Score = 159 bits (80), Expect = 1e-35 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aggagtgcaaagacag 115128 Query: 463 ccag 466 |||| Sbjct: 115127 ccag 115124 Score = 159 bits (80), Expect = 1e-35 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aggagtgcaaagacag 86992 Query: 463 ccag 466 |||| Sbjct: 86993 ccag 86996
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 507 bits (256), Expect = e-141 Identities = 386/427 (90%), Gaps = 3/427 (0%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||| |||||| ||||||| | ||||| ||||||||||||||||| ||||||||||| || Sbjct: 649 aagcaagtcttcatagggcaaatgtcattgcttatggacccgaacttgggtgatctaacc 708 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 709 atgaccaagatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaaga 768 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||||||||||||||||||||||||||| || |||||| |||||| |||||| Sbjct: 769 atcagcggatgagttgtggttaggggtgaaatgccaatcaaacccaaagctagttggttc 828 Query: 206 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 265 ||||||||||||||| |||||||| |||| || |||||||||||||||||||||||||| Sbjct: 829 tccccgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaaagcactgtttc 887 Query: 266 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--c 323 ||| |||| ||| |||| ||||||||| |||||||||| ||||||||||||||||| | Sbjct: 888 ggttcgggtcgcgagagccgtaccaaattgaggcaaactatgaatactagatatgacctc 947 Query: 324 caaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 383 |||||||||||||| | ||||| | |||||||||| |||||||||||||||||||||||| Sbjct: 948 caaaaataacagggataaaggtggaccagtgagaccatgggggataagcttcatcgtcga 1007 Query: 384 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 443 ||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 1008 gaggggaacagcccagatcaccagctaaggcccctaaatgaccgctaagttataaaggag 1067 Query: 444 gtggggg 450 || |||| Sbjct: 1068 gtagggg 1074
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 507 bits (256), Expect = e-141 Identities = 296/308 (96%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4860 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 4919 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 4920 tgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccg 4979 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4980 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaaccca 5039 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5040 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 5099 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 5100 taaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 5159 Query: 312 ctagatat 319 |||||||| Sbjct: 5160 ctagatat 5167 Score = 188 bits (95), Expect = 1e-44 Identities = 117/123 (95%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 344 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 404 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagc 463 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggt-aggagtgcagagacagc 5300 Query: 464 cag 466 ||| Sbjct: 5301 cag 5303
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 507 bits (256), Expect = e-141 Identities = 296/308 (96%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 23065 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 23006 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 23005 tgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccg 22946 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 22945 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaaccca 22886 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22885 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 22826 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 22825 taaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 22766 Query: 312 ctagatat 319 |||||||| Sbjct: 22765 ctagatat 22758 Score = 188 bits (95), Expect = 1e-44 Identities = 117/123 (95%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 344 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 404 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagc 463 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggt-aggagtgcagagacagc 22625 Query: 464 cag 466 ||| Sbjct: 22624 cag 22622
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 502 bits (253), Expect = e-139 Identities = 299/313 (95%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 5128 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 5187 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||| Sbjct: 5188 tgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccg 5247 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 5248 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaaccca 5307 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5308 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 5367 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 5368 taaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 5427 Query: 312 ctagatatgaccc 324 ||||||||||||| Sbjct: 5428 ctagatatgaccc 5440 Score = 190 bits (96), Expect = 3e-45 Identities = 125/132 (94%), Gaps = 2/132 (1%) Strand = Plus / Plus Query: 336 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 394 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 395 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgc 454 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggt-aggagtgc 5563 Query: 455 aaagacagccag 466 | |||||||||| Sbjct: 5564 agagacagccag 5575
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 502 bits (253), Expect = e-139 Identities = 299/313 (95%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 5128 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 5187 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||| Sbjct: 5188 tgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccg 5247 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 5248 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaaccca 5307 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5308 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 5367 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 5368 taaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 5427 Query: 312 ctagatatgaccc 324 ||||||||||||| Sbjct: 5428 ctagatatgaccc 5440 Score = 190 bits (96), Expect = 3e-45 Identities = 125/132 (94%), Gaps = 2/132 (1%) Strand = Plus / Plus Query: 336 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 394 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 395 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgc 454 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggt-aggagtgc 5563 Query: 455 aaagacagccag 466 | |||||||||| Sbjct: 5564 agagacagccag 5575
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 486 bits (245), Expect = e-134 Identities = 407/456 (89%), Gaps = 5/456 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||| | |||| ||||||||||||||||||| Sbjct: 138636 cggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacc 138577 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||| Sbjct: 138576 cgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccg 138517 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138516 actgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccg 138457 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||||||| || | || | | Sbjct: 138456 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggag 138397 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 138396 gtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaat 138337 Query: 311 actagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatgggggat 368 ||| | |||| ||| | | | ||| |||| ||||||||||||||||||| |||||||| Sbjct: 138336 actgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggat 138277 Query: 369 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 428 |||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 138276 aagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgc 138217 Query: 429 tcagtgataaaggaggtggggggtgcaaagacagcc 464 |||||| | |||||||| || |||||||||||||| Sbjct: 138216 tcagtggtgaaggaggt-aggagtgcaaagacagcc 138182 Score = 486 bits (245), Expect = e-134 Identities = 407/456 (89%), Gaps = 5/456 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||| | |||| ||||||||||||||||||| Sbjct: 83241 cggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacc 83300 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||| Sbjct: 83301 cgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccg 83360 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 83361 actgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccg 83420 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||||||| || | || | | Sbjct: 83421 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggag 83480 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 83481 gtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaat 83540 Query: 311 actagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatgggggat 368 ||| | |||| ||| | | | ||| |||| ||||||||||||||||||| |||||||| Sbjct: 83541 actgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggat 83600 Query: 369 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 428 |||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 83601 aagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgc 83660 Query: 429 tcagtgataaaggaggtggggggtgcaaagacagcc 464 |||||| | |||||||| || |||||||||||||| Sbjct: 83661 tcagtggtgaaggaggt-aggagtgcaaagacagcc 83695
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 476 bits (240), Expect = e-131 Identities = 344/376 (91%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 91 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 150 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 151 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 210 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 211 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 270 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 271 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 330 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 331 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 390 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 391 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggt-aggg 2754 Query: 451 gtgcaaagacagccag 466 |||||||||||||||| Sbjct: 2753 gtgcaaagacagccag 2738 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| ||||||| ||| |||| ||| |||||||||||||||||||||| Sbjct: 3180 cggagccatagcgaaagcgagtcagaatggggcaattctcactgcttatggacccgaacc 3121 Query: 72 t 72 | Sbjct: 3120 t 3120
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 476 bits (240), Expect = e-131 Identities = 293/308 (95%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 618 cggagccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaacc 677 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 678 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 737 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 797 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 798 gagctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggg 857 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 858 gtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaat 917 Query: 311 actagata 318 ||| |||| Sbjct: 918 actggata 925 Score = 155 bits (78), Expect = 2e-34 Identities = 109/118 (92%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||||| |||| | |||||||| ||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggt-aggggtgcaaagacagccag 1071
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 466 bits (235), Expect = e-128 Identities = 266/275 (96%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 159 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 218 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 219 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 278 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 338 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 339 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctagggg 398 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggt 286 ||||||||||||||||||||||| ||| ||||||| Sbjct: 399 taaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 458 bits (231), Expect = e-126 Identities = 290/307 (94%), Gaps = 2/307 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| | |||| |||||||| |||||| ||||||||| Sbjct: 144554 cggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacc 144613 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 144614 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 144673 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144674 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 144733 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 144734 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggg 144793 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144794 gtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 144853 Query: 311 actagat 317 ||||||| Sbjct: 144854 actagat 144860 Score = 458 bits (231), Expect = e-126 Identities = 290/307 (94%), Gaps = 2/307 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| | |||| |||||||| |||||| ||||||||| Sbjct: 88297 cggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacc 88238 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 88237 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 88178 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88177 actgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 88118 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggg 250 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 88117 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggg 88058 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 88057 gtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 87998 Query: 311 actagat 317 ||||||| Sbjct: 87997 actagat 87991 Score = 163 bits (82), Expect = 6e-37 Identities = 110/118 (93%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggt-aggagtgcaaagacagccag 145015 Score = 163 bits (82), Expect = 6e-37 Identities = 110/118 (93%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggt-aggagtgcaaagacagccag 87836
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 446 bits (225), Expect = e-122 Identities = 253/261 (96%), Gaps = 1/261 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 155 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 214 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 215 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 274 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 334 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 335 gagctagctggctctccccgaaatgcgttgaggcgcagcggttgactggacatctagggg 394 Query: 252 taaagcactgtttcggtgcgg 272 ||||||||||||||||||||| Sbjct: 395 taaagcactgtttcggtgcgg 415
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 426 bits (215), Expect = e-116 Identities = 291/311 (93%), Gaps = 4/311 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcga-agcgagtcttaatagggcgattgtcactgctt-atggacccgaac 70 |||||||||||||| |||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 5916 cggagccgtagcgagagcgagtcttcatagggcaattgtcactgctttatggacccgaac 5857 Query: 71 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 130 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 5856 ctgggtgatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtccgaacc 5798 Query: 131 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 190 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5797 gactgatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 5738 Query: 191 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctagg 249 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 5737 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctagg 5678 Query: 250 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 309 ||||||||||||||||||| ||| | | |||||||| | ||||||||||||| |||| Sbjct: 5677 ggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatgaa 5618 Query: 310 tactagatatg 320 ||||||||||| Sbjct: 5617 tactagatatg 5607 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaagga 442 ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaagga 5503
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 406 bits (205), Expect = e-110 Identities = 282/305 (92%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 748 cggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacc 807 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||| Sbjct: 808 cgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccg 867 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 868 actgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcg 927 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 928 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggg 987 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 988 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaat 1047 Query: 311 actag 315 ||||| Sbjct: 1048 actag 1052 Score = 151 bits (76), Expect = 2e-33 Identities = 113/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggt-gagagtgcaaagacag 1181 Query: 463 ccag 466 |||| Sbjct: 1182 ccag 1185
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 406 bits (205), Expect = e-110 Identities = 282/305 (92%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 631 cggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacc 690 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||| Sbjct: 691 cgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccg 750 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 751 actgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcg 810 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 811 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggg 870 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 871 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaat 930 Query: 311 actag 315 ||||| Sbjct: 931 actag 935 Score = 159 bits (80), Expect = 1e-35 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggt-gagagtgcaaagacag 1064 Query: 463 ccag 466 |||| Sbjct: 1065 ccag 1068
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 406 bits (205), Expect = e-110 Identities = 282/305 (92%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 644 cggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacc 703 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||| Sbjct: 704 cgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccg 763 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 764 actgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcg 823 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 824 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggg 883 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 884 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaat 943 Query: 311 actag 315 ||||| Sbjct: 944 actag 948 Score = 159 bits (80), Expect = 1e-35 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 343 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 402 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 462 |||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggt-gagagtgcaaagacag 1077 Query: 463 ccag 466 |||| Sbjct: 1078 ccag 1081
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtagggg 1049
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 352/399 (88%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 400 bits (202), Expect = e-108 Identities = 263/282 (93%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 40 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 99 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 660 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaa 719 Query: 100 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 159 |||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 160 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 219 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 220 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 278 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 279 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 320 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 900 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||||||| | |||| |||| |||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtg 1049
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 400 bits (202), Expect = e-108 Identities = 263/282 (93%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 40 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 99 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3694 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaa 3753 Query: 100 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 159 |||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3754 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 3813 Query: 160 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 219 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 3814 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 3873 Query: 220 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 278 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 3874 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 3933 Query: 279 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 320 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3934 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||||||| | |||| |||| |||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtg 4083
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 351/399 (87%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtagggg 1049
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 352/399 (88%), Gaps = 4/399 (1%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtagggg 1049
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 351/399 (87%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 392 bits (198), Expect = e-106 Identities = 262/282 (92%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 40 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 99 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 660 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaa 719 Query: 100 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 159 |||||| | |||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 160 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 219 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 220 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 278 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 279 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 320 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 900 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||||||| | |||| |||| |||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtg 1049
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 350/399 (87%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 54 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 113 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 114 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 173 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 174 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 233 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 234 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 atccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 294 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 351 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 352 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 411 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 412 ggcccctaaatgaccgctcagtgataaaggaggtggggg 450 ||||||||||||||| || ||| ||||||||||| |||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtagggg 1050
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 387 bits (195), Expect = e-104 Identities = 284/311 (91%), Gaps = 2/311 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| || |||||| ||||||| | ||||| |||||||| |||||||| Sbjct: 648 cggagccatagcgaaagcaagtcttcatagggcaaatgtcattgcttatgtacccgaact 707 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||||||| Sbjct: 708 tgggtgatctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccgaaccg 767 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 768 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccca 827 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||| Sbjct: 828 aagctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatctagggg 886 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||||||||||||||||||| || |||||||||||||| |||||||||| |||||| Sbjct: 887 taaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatgaata 946 Query: 312 ctagatatgac 322 ||||||||||| Sbjct: 947 ctagatatgac 957 Score = 159 bits (80), Expect = 1e-35 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 347 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 406 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 407 gctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggt-aggggtgcatagacagccag 1118
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 383 bits (193), Expect = e-103 Identities = 203/205 (99%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 75064 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 75005 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75004 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 74945 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74944 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 74885 Query: 192 gagctagctggttctccccgaaatg 216 ||||||||||||||||||||||||| Sbjct: 74884 gagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 383 bits (193), Expect = e-103 Identities = 203/205 (99%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 382474 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 382533 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382534 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 382593 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382594 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 382653 Query: 192 gagctagctggttctccccgaaatg 216 ||||||||||||||||||||||||| Sbjct: 382654 gagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 383 bits (193), Expect = e-103 Identities = 203/205 (99%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 113155 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 113096 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113095 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 113036 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113035 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 112976 Query: 192 gagctagctggttctccccgaaatg 216 ||||||||||||||||||||||||| Sbjct: 112975 gagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 383 bits (193), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 367837 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 367778 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367777 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 367718 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367717 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 367658 Query: 192 gagctagctggttctccccgaaatgcgtt 220 |||||||||||||||||||||||| |||| Sbjct: 367657 gagctagctggttctccccgaaattcgtt 367629 Score = 383 bits (193), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 184442 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 184383 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184382 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 184323 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184322 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 184263 Query: 192 gagctagctggttctccccgaaatgcgtt 220 |||||||||||||||||||||||| |||| Sbjct: 184262 gagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gtcgagagggaaacagcccggatc 402 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 383 bits (193), Expect = e-103 Identities = 280/305 (91%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 633 cggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacc 691 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 692 cgggtgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaaccg 751 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | Sbjct: 752 actgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcg 811 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||| Sbjct: 812 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggg 871 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 872 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaat 931 Query: 311 actag 315 ||||| Sbjct: 932 actag 936 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||||||||||||||| |||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtg 1051
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 367 bits (185), Expect = 2e-98 Identities = 278/305 (91%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 124632 cggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacc 124574 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||| Sbjct: 124573 cgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccg 124514 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | Sbjct: 124513 actgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcg 124454 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||| Sbjct: 124453 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggg 124394 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 124393 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaat 124334 Query: 311 actag 315 ||||| Sbjct: 124333 actag 124329 Score = 367 bits (185), Expect = 2e-98 Identities = 278/305 (91%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 95234 cggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacc 95292 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||| Sbjct: 95293 cgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccg 95352 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | Sbjct: 95353 actgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcg 95412 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||| Sbjct: 95413 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggg 95472 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 95473 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaat 95532 Query: 311 actag 315 ||||| Sbjct: 95533 actag 95537 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Minus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||||||||||||||| |||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtg 124214 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||||||||||||||| |||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtg 95652
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 367 bits (185), Expect = 2e-98 Identities = 206/213 (96%) Strand = Plus / Plus Query: 238 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 297 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 298 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 357 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 358 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 418 taaatgaccgctcagtgataaaggaggtggggg 450 ||||||| |||||||||||||||||||| |||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtagggg 529 Score = 359 bits (181), Expect = 5e-96 Identities = 203/209 (97%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 90 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 149 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 150 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 209 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 269 Query: 192 gagctagctggttctccccgaaatgcgtt 220 ||||||||||||||||||||||||||||| Sbjct: 270 gagctagctggttctccccgaaatgcgtt 298
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 365 bits (184), Expect = 9e-98 Identities = 206/212 (97%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 604 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 663 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 664 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 723 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 783 Query: 192 gagctagctggttctccccgaaatgcgttgag 223 |||||||||||||||||||||||||||||||| Sbjct: 784 gagctagctggttctccccgaaatgcgttgag 815
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 349 bits (176), Expect = 5e-93 Identities = 255/280 (91%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 40 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 99 ||||| |||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 671 agggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaa 730 Query: 100 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 159 |||||| |||||||||| ||||||| ||||||| ||||||||| |||| ||||||||| Sbjct: 731 gcttgggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagc 790 Query: 160 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 219 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 791 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 850 Query: 220 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 278 |||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 851 tgaggcgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgcg 910 Query: 279 cgagcggtaccaaatcgaggcaaactctgaatactagata 318 ||||||||||||||||| ||||||||||||||| |||| Sbjct: 911 aaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 125 bits (63), Expect = 1e-25 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 411 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 461 ||||||||||||| ||||| |||| |||||||||| ||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggt-gggagtgcaaagaca 1076
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 345 bits (174), Expect = 8e-92 Identities = 250/274 (91%), Gaps = 1/274 (0%) Strand = Plus / Plus Query: 48 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 107 |||||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| | Sbjct: 623 tgtcactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggt 682 Query: 108 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 167 ||| | ||| ||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 683 gaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggtta 742 Query: 168 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 227 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 743 ggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgc 802 Query: 228 agcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 286 ||| |||| ||||| | ||||||||||||||||||||||||||||||||| |||||| Sbjct: 803 agcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggt 862 Query: 287 accaaatcgaggcaaactctgaatactagatatg 320 ||||||||||||||||||||||||||||| |||| Sbjct: 863 accaaatcgaggcaaactctgaatactaggtatg 896 Score = 153 bits (77), Expect = 6e-34 Identities = 108/117 (92%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 350 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 409 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 410 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 |||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggt-gggagtgcaaagacatccag 1027
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 341 bits (172), Expect = 1e-90 Identities = 179/180 (99%), Gaps = 1/180 (0%) Strand = Plus / Minus Query: 287 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 347 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 407 gctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccag 341
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 341 bits (172), Expect = 1e-90 Identities = 276/307 (89%), Gaps = 4/307 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||||||||||||||||| ||||||| ||| |||||||||| Sbjct: 631 cggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacc 689 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||||| Sbjct: 690 cgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccg 749 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 || ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | Sbjct: 750 accgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcg 809 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctagg 249 ||||||||||||||||||||||||||||||||||||||| |||| | || |||||| Sbjct: 810 gagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctagg 869 Query: 250 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 309 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 870 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaa 929 Query: 310 tactaga 316 ||||||| Sbjct: 930 tactaga 936 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 409 taaggcccctaaatgaccgctcagtg 434 ||||||||||||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtg 1037
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 341 bits (172), Expect = 1e-90 Identities = 276/307 (89%), Gaps = 4/307 (1%) Strand = Plus / Minus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||||||||||||||||| ||||||| ||| |||||||||| Sbjct: 115031 cggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacc 114973 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||||| Sbjct: 114972 cgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccg 114913 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 || ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | Sbjct: 114912 accgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcg 114853 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctagg 249 ||||||||||||||||||||||||||||||||||||||| |||| | || |||||| Sbjct: 114852 gagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctagg 114793 Query: 250 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 309 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 114792 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaa 114733 Query: 310 tactaga 316 ||||||| Sbjct: 114732 tactaga 114726 Score = 341 bits (172), Expect = 1e-90 Identities = 276/307 (89%), Gaps = 4/307 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||||||||||||||||| ||||||| ||| |||||||||| Sbjct: 86957 cggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacc 87015 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||||| Sbjct: 87016 cgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccg 87075 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 || ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | Sbjct: 87076 accgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcg 87135 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctagg 249 ||||||||||||||||||||||||||||||||||||||| |||| | || |||||| Sbjct: 87136 gagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctagg 87195 Query: 250 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 309 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 87196 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaa 87255 Query: 310 tactaga 316 ||||||| Sbjct: 87256 tactaga 87262 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 409 taaggcccctaaatgaccgctcagtg 434 ||||||||||||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtg 114625 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 409 taaggcccctaaatgaccgctcagtg 434 ||||||||||||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtg 87363
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 333 bits (168), Expect = 3e-88 Identities = 275/308 (89%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 16 agccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 74 |||||||||||| ||||||| | |||||| |||||||| ||||||||||||||| || Sbjct: 1038 agccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccgg 1097 Query: 75 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 134 |||||||||||||| ||||| |||||||||| |||| | ||| |||| ||||||||||| Sbjct: 1098 gtgatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgact 1157 Query: 135 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 194 | ||||||| || ||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 1158 ggtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 1217 Query: 195 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 253 |||||||||||||||||||||||||||||||||||| |||||| || | |||||||| Sbjct: 1218 ctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggta 1277 Query: 254 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 313 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1278 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1337 Query: 314 agatatga 321 ||| |||| Sbjct: 1338 agacatga 1345 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 350 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 409 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 410 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||||||||| ||||||||| | | |||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggt-gagagtgcaaagacagccag 1473
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 331 bits (167), Expect = 1e-87 Identities = 271/303 (89%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| || |||||| |||||| |||||||||| |||||||||||||| Sbjct: 4681 cggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacc 4740 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| Sbjct: 4741 cgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccg 4800 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 || ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 4801 accgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcg 4860 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 |||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||| Sbjct: 4861 gagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggg 4920 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 4921 gtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaat 4980 Query: 311 act 313 ||| Sbjct: 4981 act 4983 Score = 125 bits (63), Expect = 1e-25 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 411 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 461 ||||||||||||| ||||| |||| |||||||||| ||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggt-gggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 331 bits (167), Expect = 1e-87 Identities = 271/303 (89%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| || |||||| |||||| |||||||||| |||||||||||||| Sbjct: 648 cggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacc 707 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| Sbjct: 708 cgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccg 767 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 || ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 768 accgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcg 827 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 |||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||| Sbjct: 828 gagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggg 887 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 888 gtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaat 947 Query: 311 act 313 ||| Sbjct: 948 act 950 Score = 125 bits (63), Expect = 1e-25 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 411 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 461 ||||||||||||| ||||| |||| |||||||||| ||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggt-gggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 331 bits (167), Expect = 1e-87 Identities = 271/303 (89%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| || |||||| |||||| |||||||||| |||||||||||||| Sbjct: 648 cggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacc 707 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| Sbjct: 708 cgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccg 767 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 || ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 768 accgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcg 827 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 250 |||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||| Sbjct: 828 gagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggg 887 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 888 gtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaat 947 Query: 311 act 313 ||| Sbjct: 948 act 950 Score = 117 bits (59), Expect = 3e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 411 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 461 ||||||||||||| ||||| |||| ||||| |||| ||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggt-gggagtgcaaagaca 1081
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 323 bits (163), Expect = 3e-85 Identities = 247/273 (90%), Gaps = 4/273 (1%) Strand = Plus / Plus Query: 47 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 106 |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 670 ttgtcactttttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttggg 729 Query: 107 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 166 | |||| ||| ||||||||||||||| ||||||||| |||| ||||||||||||||||| Sbjct: 730 taaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggtt 789 Query: 167 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 790 aggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcg 849 Query: 227 cagcagttgac---tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 282 |||| |||||| ||| | |||||||||||||||||||||||||||||||||||| ||| Sbjct: 850 cagcggttgacgaatgggctatctaggggtaaagcactgtttcggtgcgggctgcgagag 909 Query: 283 cggtaccaaatcgaggcaaactctgaatactag 315 ||||||||||||| ||||||| ||||||||| Sbjct: 910 cggtaccaaatcgtagcaaactaagaatactag 942 Score = 163 bits (82), Expect = 6e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 319 bits (161), Expect = 5e-84 Identities = 264/295 (89%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgatctat 83 |||| |||||||||||||||||| |||||| ||||||||||||||| |||||||||| Sbjct: 711 aagcaagtcttaatagggcgattttgtcactttttatggacccgaacccgggtgatctaa 770 Query: 84 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 143 |||||||||||||||||||||| | |||| ||| || |||||||||||| ||||||||| Sbjct: 771 ccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaaccgaccgatgttgaa 830 Query: 144 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 203 |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 831 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaacccggagctagctggt 890 Query: 204 tctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggggtaaagcact 260 ||||||||||||||||||||||||||| ||||| || | ||||||||||||||||| Sbjct: 891 tctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggggtaaagcact 950 Query: 261 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 315 |||||||||||||||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 951 gtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 319 bits (161), Expect = 5e-84 Identities = 252/281 (89%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 42 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 101 ||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 624 ggcgaatgtcactgtttatggacccgaacccgggtgatctatccatggccaggatgaagt 683 Query: 102 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 161 |||| |||||| || ||||||||||||||||| ||||||| || || |||||||| || Sbjct: 684 ttgggtgaaaccaaatggaggtccgaaccgactggtgttgaaaaaccaacggatgagctg 743 Query: 162 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 221 ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 744 tggataggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 803 Query: 222 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 280 ||||||||| ||||||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 804 aggcgcagcggttgactagactatttaggggtaaagcactgtttcggtgcgggctgtgaa 863 Query: 281 agcggtaccaaatcgaggcaaactctgaatactagatatga 321 | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 864 aacggtaccaaattgatgcaaactctgaatactaaatatga 904 Score = 149 bits (75), Expect = 9e-33 Identities = 109/119 (91%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||||| |||||||||||| || | | |||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgt-gagagtgcaaagacagccag 1032
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 119 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 178 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 179 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 238 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 239 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 298 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 299 caaactctgaatactagatat 319 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 307 bits (155), Expect = 2e-80 Identities = 274/311 (88%), Gaps = 2/311 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| || |||||| |||||| | ||||| ||||| ||||||||||| Sbjct: 623 cggagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaact 682 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 ||||||||||| |||||||||||||| | |||| | |||||||| | |||| |||||| Sbjct: 683 tgggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccg 742 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 743 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccca 802 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||| ||||||||||| || ||||||||||||| || || |||||||||| Sbjct: 803 aagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctagggg 861 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||| ||||| |||||||| || |||||||||||||| |||||| ||| |||||| Sbjct: 862 taaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaata 921 Query: 312 ctagatatgac 322 ||||||||||| Sbjct: 922 ctagatatgac 932 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 325 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 384 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 385 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 444 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 445 t 445 | Sbjct: 1064 t 1064
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 46 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 105 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 106 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 165 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 166 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 225 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 226 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 282 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 283 cggtaccaaatcgaggcaaactctgaatactaga 316 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 409 taaggcccctaaatgaccgctcagtg 434 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 305 bits (154), Expect = 7e-80 Identities = 161/162 (99%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 305 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 365 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 425 ccgctcagtgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggt-gggggtgcaaagacagccag 161
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 240 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 241 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 300 aaactctgaatactagatatgac 322 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 411 aggcccctaaatg 423 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 240 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 241 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 300 aaactctgaatactagatatgac 322 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 411 aggcccctaaatg 423 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 240 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 241 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 300 aaactctgaatactagatatgac 322 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 411 aggcccctaaatg 423 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 297 bits (150), Expect = 2e-77 Identities = 260/294 (88%), Gaps = 2/294 (0%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||| |||||||||||||| |||||| ||||||||||||||| |||||||||| || Sbjct: 795 aagcaagtcttaatagggctcaggtcactctttatggacccgaacccgggtgatctaacc 854 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 |||||||||||||||||| | | |||| || || |||||||||||| ||||||||| | Sbjct: 855 atgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgttgaaaa 914 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| |||||||||||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 915 atcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttc 974 Query: 206 tccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagcactgtt 263 ||||||||||||||||||||||||| ||| || ||| | |||||||||||||||||||| Sbjct: 975 tccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagcactgtt 1034 Query: 264 tcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 317 ||||||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1035 tcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 139 bits (70), Expect = 9e-30 Identities = 91/98 (92%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 49 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 108 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 109 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 168 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 169 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 228 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 229 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 285 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 286 taccaaatcgaggcaaactctgaatactaga 316 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 6e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 287 bits (145), Expect = 2e-74 Identities = 239/269 (88%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 47 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 106 |||||||| |||| |||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 114764 ttgtcactatttatagacccgaacccgggtgatctaaccatggccagggtgaagcttggg 114705 Query: 107 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 166 | |||||||| |||| |||||| || | |||||||| ||| | |||||||||||||||| Sbjct: 114704 taaaactaagtggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggtt 114645 Query: 167 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 114644 aggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcg 114585 Query: 227 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 285 |||| ||||| | | | ||||||||||||||||||||||||||||||||| |||||| Sbjct: 114584 cagcggttgagattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcgg 114525 Query: 286 taccaaatcgaggcaaactctgaatacta 314 ||||||||||||||||||||||||||||| Sbjct: 114524 taccaaatcgaggcaaactctgaatacta 114496 Score = 287 bits (145), Expect = 2e-74 Identities = 239/269 (88%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 47 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 106 |||||||| |||| |||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 2753 ttgtcactatttatagacccgaacccgggtgatctaaccatggccagggtgaagcttggg 2812 Query: 107 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 166 | |||||||| |||| |||||| || | |||||||| ||| | |||||||||||||||| Sbjct: 2813 taaaactaagtggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggtt 2872 Query: 167 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 2873 aggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcg 2932 Query: 227 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 285 |||| ||||| | | | ||||||||||||||||||||||||||||||||| |||||| Sbjct: 2933 cagcggttgagattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcgg 2992 Query: 286 taccaaatcgaggcaaactctgaatacta 314 ||||||||||||||||||||||||||||| Sbjct: 2993 taccaaatcgaggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 408 ctaaggcccctaaat 422 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 408 ctaaggcccctaaat 422 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 281 bits (142), Expect = 1e-72 Identities = 164/170 (96%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 14 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 73 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 74 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 133 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 240 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 241 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 300 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 301 aactctgaatactagata 318 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 240 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 241 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 300 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 301 aactctgaatactagata 318 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 280 bits (141), Expect = 4e-72 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 29 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 88 ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| ||||| Sbjct: 267 cgagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaaccatg 326 Query: 89 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 148 |||||||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 327 tccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 386 Query: 149 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 208 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 387 agcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 446 Query: 209 ccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgtttcgg 267 |||||||| ||| ||||||||| || | |||||| ||||||||||||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgtttcgg 506 Query: 268 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 507 tgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| ||| ||||| ||| |||||||||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtggg 666
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 280 bits (141), Expect = 4e-72 Identities = 229/257 (89%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 189600 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 189659 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 189660 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaa 189719 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 236 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 189720 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 189779 Query: 237 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 295 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 189780 tgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 189839 Query: 296 aggcaaactctgaatac 312 ||||||||||||||||| Sbjct: 189840 aggcaaactctgaatac 189856 Score = 280 bits (141), Expect = 4e-72 Identities = 229/257 (89%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 151027 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 151086 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 151087 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaa 151146 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 236 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 151147 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 151206 Query: 237 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 295 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 151207 tgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 151266 Query: 296 aggcaaactctgaatac 312 ||||||||||||||||| Sbjct: 151267 aggcaaactctgaatac 151283 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtggg 189971 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtggg 151398
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 278 bits (140), Expect = 2e-71 Identities = 266/304 (87%), Gaps = 3/304 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgatt-gtcactgcttatggacccgaacc 71 |||||| ||||||| |||||| ||||||| ||| || |||||| |||| |||||||||| Sbjct: 2449 ggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacc 2508 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 |||||||||| ||||| ||||| |||||||| | | ||||||| |||| |||||||| Sbjct: 2509 cgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccg 2568 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 | ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 2569 atcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccg 2628 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggg 250 ||||||||||||||||||||||||||||||||||||||| ||||| | || ||||| Sbjct: 2629 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggg 2688 Query: 251 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 310 ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 2689 gtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaat 2748 Query: 311 acta 314 |||| Sbjct: 2749 acta 2752 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 421 atgaccgctcagtgataaaggaggtgg 447 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 276 bits (139), Expect = 6e-71 Identities = 231/261 (88%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 56 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 115 ||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||| || Sbjct: 656 cttatggacccgaacctgggtgatctaaccatgaccagggtgaagcttgggtaaaaccaa 715 Query: 116 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 175 | || | ||||||| |||||||||||| |||||| ||||||||||||||||| |||||| Sbjct: 716 gtggaagcccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtgaa 775 Query: 176 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---ag 232 |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 776 atgccaatcgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggttg 835 Query: 233 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 292 |||| || | || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 836 ttgatgggtcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaa 895 Query: 293 tcgaggcaaactctgaatact 313 ||| |||||||| ||||||| Sbjct: 896 tcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 3e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 409 taaggcccctaaat 422 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 274 bits (138), Expect = 2e-70 Identities = 262/302 (86%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacc 71 ||||||| ||||||| |||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 72 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 131 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 132 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 191 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 192 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 251 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 312 ct 313 || Sbjct: 2489 ct 2490 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtggg 2604
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 236 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 237 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 294 cgaggcaaactctgaatact 313 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 236 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 237 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 294 cgaggcaaactctgaatact 313 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 188677 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 188736 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 |||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 188737 tggaggtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaa 188796 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 236 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 188797 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 188856 Query: 237 --ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 294 || | | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 188857 tgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 188915 Query: 295 gaggcaaactctgaatacta 314 |||||||||||||||||||| Sbjct: 188916 gaggcaaactctgaatacta 188935 Score = 264 bits (133), Expect = 2e-67 Identities = 230/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 150234 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 150293 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 ||||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 150294 tggaggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaa 150353 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 236 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 150354 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 150413 Query: 237 --ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 294 || | | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 150414 tgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 150472 Query: 295 gaggcaaactctgaatacta 314 |||||||||||||||||||| Sbjct: 150473 gaggcaaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 411 aggcccctaaat 422 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 351 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 410 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 411 aggcccctaaat 422 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 268 bits (135), Expect = 1e-68 Identities = 265/305 (86%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 16 agccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 74 |||||||||||| |||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 75 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 134 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 135 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 194 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 195 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 312 ctaga 316 ||||| Sbjct: 935 ctaga 939 Score = 123 bits (62), Expect = 5e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 268 bits (135), Expect = 1e-68 Identities = 265/305 (86%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 16 agccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 74 |||||||||||| |||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 75 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 134 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 135 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 194 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 195 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 251 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 252 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 311 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 312 ctaga 316 ||||| Sbjct: 2817 ctaga 2821 Score = 123 bits (62), Expect = 5e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 266 bits (134), Expect = 6e-68 Identities = 150/154 (97%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 313 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 372 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 373 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 432 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 433 tgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||| ||||||||||||| |||||| Sbjct: 19152950 tgataaaggaggt-gggggtgcaaagatagccag 19152982
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 266 bits (134), Expect = 6e-68 Identities = 150/154 (97%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 313 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 372 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 373 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 432 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 433 tgataaaggaggtggggggtgcaaagacagccag 466 ||||||||||||| ||||||||||||| |||||| Sbjct: 76345 tgataaaggaggt-gggggtgcaaagatagccag 76377
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 264 bits (133), Expect = 2e-67 Identities = 251/287 (87%), Gaps = 5/287 (1%) Strand = Plus / Plus Query: 29 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 88 ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 267 cgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatg 326 Query: 89 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 148 |||||||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 327 gccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 386 Query: 149 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 208 ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 agcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 209 ccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttc 265 |||||||| ||| ||||||||| || ||| | | |||| | ||||||||||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttc 504 Query: 266 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 505 ggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||| ||| |||| | |||| |||||||||||||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtg 664
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 262 bits (132), Expect = 9e-67 Identities = 227/258 (87%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 61 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 120 ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| || Sbjct: 658 ggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtgga 717 Query: 121 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 180 ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 718 ggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcc 777 Query: 181 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gac 237 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 778 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcgac 837 Query: 238 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 297 || |||||||||||||||||||||||||||||||| || || |||||||||||| Sbjct: 838 gggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgta 897 Query: 298 gcaaactctgaatactag 315 ||||||| ||||||||| Sbjct: 898 gcaaactaagaatactag 915 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtg 446 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 258 bits (130), Expect = 1e-65 Identities = 194/214 (90%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 258 bits (130), Expect = 1e-65 Identities = 194/214 (90%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 1e-65 Identities = 194/214 (90%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 256 bits (129), Expect = 6e-65 Identities = 250/287 (87%), Gaps = 5/287 (1%) Strand = Plus / Plus Query: 29 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 88 ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 267 cgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatg 326 Query: 89 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 148 |||||||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 327 gccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 386 Query: 149 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 208 |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 agcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 209 ccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttc 265 |||||||| ||| ||||||||| || ||| | | |||| | ||||||||||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttc 504 Query: 266 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 505 ggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| ||| |||| | |||| | |||||||||||||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtggg 666
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 252 bits (127), Expect = 9e-64 Identities = 252/293 (86%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||||| || Sbjct: 137133 aagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatctaacc 137192 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 |||||||||||||||||||| | |||| ||| || | |||||||||| ||||||||| | Sbjct: 137193 atgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgttgaaaa 137252 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| |||||||||||||||||||||| ||||| | | |||||| | |||||||||||||| Sbjct: 137253 atcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagctggttc 137312 Query: 206 tccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagcactgt 262 || ||||||| ||||||||||||| ||| ||| || ||||||||||||||||||| Sbjct: 137313 tcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgt 137372 Query: 263 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 315 |||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137373 ttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 252 bits (127), Expect = 9e-64 Identities = 252/293 (86%), Gaps = 3/293 (1%) Strand = Plus / Minus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||||| || Sbjct: 48411 aagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatctaacc 48352 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 |||||||||||||||||||| | |||| ||| || | |||||||||| ||||||||| | Sbjct: 48351 atgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgttgaaaa 48292 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| |||||||||||||||||||||| ||||| | | |||||| | |||||||||||||| Sbjct: 48291 atcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagctggttc 48232 Query: 206 tccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagcactgt 262 || ||||||| ||||||||||||| ||| ||| || ||||||||||||||||||| Sbjct: 48231 tcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgt 48172 Query: 263 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 315 |||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48171 ttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 409 taaggcccctaaatg 423 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 409 taaggcccctaaatg 423 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 9e-64 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 49 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 108 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 109 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 168 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 169 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 228 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 229 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 287 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 288 ccaaatcgaggcaaactctgaatacta 314 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 409 taaggcccctaaat 422 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 250 bits (126), Expect = 3e-63 Identities = 272/316 (86%), Gaps = 11/316 (3%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgatt-----gtcactgcttatggaccc 66 ||||||| ||||||| ||||||||||||||||||||| |||||| | ||||||||| Sbjct: 763 cggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggaccc 822 Query: 67 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 126 ||||| |||||||||| ||||||||||||||||||||| | | || ||| |||||||| Sbjct: 823 gaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccg 882 Query: 127 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 186 ||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||| Sbjct: 883 aaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcga 942 Query: 187 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggaca 243 || | ||||||||||| ||||||||||||||||||||||||||| | ||||| | | Sbjct: 943 actcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagcta 1001 Query: 244 tctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 302 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| |||||| Sbjct: 1002 tctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaa 1061 Query: 303 ctctgaatactagata 318 ||| |||||||||||| Sbjct: 1062 ctcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 383 agagggaaacagcccggatcaccagctaaggcccctaaatg 423 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 250 bits (126), Expect = 3e-63 Identities = 253/294 (86%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||| || Sbjct: 640 aagcgagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatctaacc 699 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||| ||||||||| |||||| | || |||||||||||| || |||||||| Sbjct: 700 atggccaggaggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgttgaaga 759 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 || |||||||||||||||||||||||||||| ||| |||||| | |||||||||||||| Sbjct: 760 gtcggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagctggttc 819 Query: 206 tccccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaaagcac 259 ||||||||||||||||||||||||| || || ||| || |||||||||||||||| Sbjct: 820 tccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaaagcac 879 Query: 260 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 313 ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 880 tgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 345 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 404 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 405 cagctaaggcccctaaatgaccgctcagtgataaagga 442 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 3e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 119 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 178 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 179 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 238 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 239 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 295 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 296 aggcaaactctgaatactag 315 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 407 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 408 ctaaggcccctaaatga 424 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 48 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 103 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 250 bits (126), Expect = 3e-63 Identities = 272/316 (86%), Gaps = 11/316 (3%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgatt-----gtcactgcttatggaccc 66 ||||||| ||||||| ||||||||||||||||||||| |||||| | ||||||||| Sbjct: 763 cggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggaccc 822 Query: 67 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 126 ||||| |||||||||| ||||||||||||||||||||| | | || ||| |||||||| Sbjct: 823 gaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccg 882 Query: 127 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 186 ||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||| Sbjct: 883 aaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcga 942 Query: 187 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggaca 243 || | ||||||||||| ||||||||||||||||||||||||||| | ||||| | | Sbjct: 943 actcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagcta 1001 Query: 244 tctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 302 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| |||||| Sbjct: 1002 tctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaa 1061 Query: 303 ctctgaatactagata 318 ||| |||||||||||| Sbjct: 1062 ctcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 383 agagggaaacagcccggatcaccagctaaggcccctaaatg 423 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 250 bits (126), Expect = 3e-63 Identities = 193/214 (90%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 244 bits (123), Expect = 2e-61 Identities = 261/301 (86%), Gaps = 7/301 (2%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgatctat 83 |||||||||| ||||||||| | |||||| |||||||||||||||| |||||||||| Sbjct: 667 aagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaacccgggtgatctaa 726 Query: 84 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 143 |||||||||||||||||||||| | || | ||| ||||||||||||||| ||||||||| Sbjct: 727 ccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccgaccgatgttgaa 786 Query: 144 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 203 |||| |||||||||||||||||||||| ||||| ||| |||||| | ||||||||||| Sbjct: 787 aaatcggcggatgagttgtggttaggggagaaattccaatcgaactcggagctagctgga 846 Query: 204 tctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaaagc-ac 259 ||||||||||||||||||||||||||| || || || || |||| |||||||||| || Sbjct: 847 tctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaaagctac 905 Query: 260 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 319 ||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| |||||| Sbjct: 906 tgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaatacaagatat 965 Query: 320 g 320 | Sbjct: 966 g 966 Score = 109 bits (55), Expect = 8e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 409 taaggcccctaaatg 423 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtggg 2137742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtggg 477118 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 242 bits (122), Expect = 9e-61 Identities = 192/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 240 bits (121), Expect = 3e-60 Identities = 184/205 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| |||||||||| |||| || || | |||||||||| |||||||||| || Sbjct: 265 aagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatctaacc 324 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | |||| ||| ||||||||||||||| ||||||||| | Sbjct: 325 atgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaa 384 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 385 atcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 444 Query: 206 tccccgaaatgcgttgaggcgcagc 230 ||||||||||||||||||||||||| Sbjct: 445 tccccgaaatgcgttgaggcgcagc 469 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||| ||| || ||||| |||||||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtggg 667 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 308 aatac 312 ||||| Sbjct: 548 aatac 552
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 240 bits (121), Expect = 3e-60 Identities = 184/205 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| || |||||| | ||||||| |||| |||||||||| |||||||||| || Sbjct: 265 aagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatctaacc 324 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| | Sbjct: 325 atgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaa 384 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 385 atcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 444 Query: 206 tccccgaaatgcgttgaggcgcagc 230 ||||||||||| |||||||| |||| Sbjct: 445 tccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 446 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 308 aatac 312 ||||| Sbjct: 548 aatac 552
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 240 bits (121), Expect = 3e-60 Identities = 227/259 (87%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 57 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 116 |||| |||||||||| ||||||||| ||||| |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 117 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 176 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaa 414 Query: 177 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--t 234 ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || | Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaat 474 Query: 235 gactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 293 || | | |||| | |||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 475 gatt--aaatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaat 532 Query: 294 cgaggcaaactctgaatac 312 |||| ||||||| |||||| Sbjct: 533 cgagacaaactcagaatac 551 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| ||| |||| | ||| |||||||||||||||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtggg 666
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 240 bits (121), Expect = 3e-60 Identities = 236/272 (86%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 49 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 108 |||||| |||||||||||||||| |||||||||| |||| |||||||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccaggatgaaatttgggta 915 Query: 109 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 168 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| |||| Sbjct: 916 acaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattag 975 Query: 169 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 228 ||| ||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 976 gggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgca 1035 Query: 229 gcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcgg 285 || ||| || | |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1036 gcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcgg 1095 Query: 286 taccaaatcgaggcaaactctgaatactagat 317 |||||| ||| ||||||||| ||||||||||| Sbjct: 1096 taccaagtcgtggcaaactcagaatactagat 1127 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 383 agagggaaacagcccggatcaccagctaaggcccctaaatg 423 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 240 bits (121), Expect = 3e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 47 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 106 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 39703 Query: 107 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 166 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 39702 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 39643 Query: 167 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 39642 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 39583 Query: 227 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 285 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 39582 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 39523 Query: 286 taccaaatcgaggcaaactctgaatacta 314 ||||||||||| ||||||||||||||||| Sbjct: 39522 taccaaatcgatgcaaactctgaatacta 39494 Score = 240 bits (121), Expect = 3e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 47 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 106 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 19697 Query: 107 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 166 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 19698 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 19757 Query: 167 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 19758 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 19817 Query: 227 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 285 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 19818 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 19877 Query: 286 taccaaatcgaggcaaactctgaatacta 314 ||||||||||| ||||||||||||||||| Sbjct: 19878 taccaaatcgatgcaaactctgaatacta 19906 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 3e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 63 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 122 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 123 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 182 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 183 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 242 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 243 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 301 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 302 actctgaatacta 314 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | ||| |||| ||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtggg 1497
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 3e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 242 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 300 aaactctgaatactagatatg 320 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 347 ggccagtgagacgatgggggataagcttcat 377 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 236 bits (119), Expect = 5e-59 Identities = 258/299 (86%), Gaps = 4/299 (1%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgatctatc 84 |||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||| Sbjct: 663 aagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgatctatt 722 Query: 85 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 144 |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 723 catggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaa 782 Query: 145 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 204 |||| ||||||||| |||| |||||| ||||| ||| |||||| | ||||||||||| | Sbjct: 783 aatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagctggat 842 Query: 205 ctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc-actg 261 |||||||||||||||||||||||||| || | ||| | |||| |||||||||| |||| Sbjct: 843 ctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagcgactg 902 Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 320 ||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||||||| Sbjct: 903 tttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaagatatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 409 taaggcccctaaatg 423 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 236 bits (119), Expect = 5e-59 Identities = 258/299 (86%), Gaps = 4/299 (1%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgatctatc 84 |||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||| Sbjct: 663 aagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgatctatt 722 Query: 85 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 144 |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 723 catggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaa 782 Query: 145 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 204 |||| ||||||||| |||| |||||| ||||| ||| |||||| | ||||||||||| | Sbjct: 783 aatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagctggat 842 Query: 205 ctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc-actg 261 |||||||||||||||||||||||||| || | ||| | |||| |||||||||| |||| Sbjct: 843 ctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagcgactg 902 Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 320 ||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||||||| Sbjct: 903 tttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaagatatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 409 taaggcccctaaatg 423 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 234 bits (118), Expect = 2e-58 Identities = 187/210 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 ||||||||| |||||||||||| ||||| || | |||||||||| |||||||||| || Sbjct: 267 aagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatctaacc 326 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | |||| ||| ||||||||||||||| ||||||||| | Sbjct: 327 atgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaa 386 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 387 atcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 446 Query: 206 tccccgaaatgcgttgaggcgcagcagttg 235 ||||||||||| ||||||||||||| |||| Sbjct: 447 tccccgaaatgtgttgaggcgcagcggttg 476 Score = 129 bits (65), Expect = 9e-27 Identities = 92/101 (91%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| ||| ||||| ||||||||||| ||||||||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtggg 669 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 308 aatac 312 ||||| Sbjct: 550 aatac 554
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 234 bits (118), Expect = 2e-58 Identities = 270/316 (85%), Gaps = 11/316 (3%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgatt-----gtcactgcttatggaccc 66 ||||||| ||||||| ||||||||||||||||||| | |||||| ||||||||| Sbjct: 817 cggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggaccc 876 Query: 67 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 126 ||||| |||||||||| ||||||||||||||||||||| | | || ||| |||||||| Sbjct: 877 gaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccg 936 Query: 127 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 186 ||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||| Sbjct: 937 aaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcga 996 Query: 187 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggaca 243 || | ||||||||||| ||||||||||||||||||||||||||| | ||||| | | Sbjct: 997 actcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagcta 1055 Query: 244 tctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 302 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| |||||| Sbjct: 1056 tctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaa 1115 Query: 303 ctctgaatactagata 318 ||| |||||||||||| Sbjct: 1116 ctcagaatactagata 1131 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 383 agagggaaacagcccggatcaccagctaaggcccctaaatg 423 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 234 bits (118), Expect = 2e-58 Identities = 244/279 (87%), Gaps = 9/279 (3%) Strand = Plus / Plus Query: 48 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 107 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 108 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 167 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 905 Query: 168 ggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggcg 226 |||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| ||| Sbjct: 906 ggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcg 962 Query: 227 cagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 281 |||| || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 963 cagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 1022 Query: 282 gcggtaccaaatcgaggcaaactctgaatactagatatg 320 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 1023 gcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 129 bits (65), Expect = 9e-27 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggt 445 ||||||||||||||| ||||| |||| ||||||||| Sbjct: 1132 taaggcccctaaatggccgctaagtggcaaaggaggt 1168
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||||||||||||| |||||| || |||| |||||||||| ||||||||| || Sbjct: 320238 aagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaacc 320297 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || ||| |||||||||||||||||| |||||| | Sbjct: 320298 atggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagttgaaaa 320357 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 320358 ttcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttc 320417 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 320418 tccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 232 bits (117), Expect = 8e-58 Identities = 221/254 (87%), Gaps = 5/254 (1%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| ||| Sbjct: 2216 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 2275 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2276 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2335 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2336 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2393 Query: 242 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 298 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 2394 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 2453 Query: 299 caaactctgaatac 312 |||||||||||||| Sbjct: 2454 caaactctgaatac 2467 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||||| || ||||| |||||||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtggg 2581
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 232 bits (117), Expect = 8e-58 Identities = 223/256 (87%), Gaps = 3/256 (1%) Strand = Plus / Minus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 27136 gacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggag 27077 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 |||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| Sbjct: 27076 gtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatgcca 27017 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 239 ||||| || ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 27016 atcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatgcta 26957 Query: 240 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 | | ||||||||||||||||||||||||||||||| || || ||||||||||||| || Sbjct: 26956 ta-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgatgc 26898 Query: 300 aaactctgaatactag 315 |||||||||||||||| Sbjct: 26897 aaactctgaatactag 26882 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 350 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 409 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 410 aaggcccctaaat 422 ||||||||||||| Sbjct: 26808 aaggcccctaaat 26796
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||||||||||||| |||||| || |||| |||||||||| ||||||||| || Sbjct: 2661 aagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaacc 2720 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || ||| |||||||||||||||||| |||||| | Sbjct: 2721 atggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagttgaaaa 2780 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 2781 ttcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttc 2840 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 2841 tccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||||||||||||| |||||| || |||| |||||||||| ||||||||| || Sbjct: 2662 aagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaacc 2721 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || ||| |||||||||||||||||| |||||| | Sbjct: 2722 atggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagttgaaaa 2781 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 2782 ttcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttc 2841 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 2842 tccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 232 bits (117), Expect = 8e-58 Identities = 221/254 (87%), Gaps = 5/254 (1%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| ||| Sbjct: 300 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 359 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 419 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 420 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 477 Query: 242 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 298 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 478 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 537 Query: 299 caaactctgaatac 312 |||||||||||||| Sbjct: 538 caaactctgaatac 551 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||||| || ||||| |||||||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtggg 665
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||||||||||||| |||||| || |||| |||||||||| ||||||||| || Sbjct: 20219 aagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaacc 20160 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || ||| |||||||||||||||||| |||||| | Sbjct: 20159 atggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagttgaaaa 20100 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 20099 ttcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttc 20040 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 20039 tccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||||||||||||| |||||| || |||| |||||||||| ||||||||| || Sbjct: 1973 aagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaacc 1914 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || ||| |||||||||||||||||| |||||| | Sbjct: 1913 atggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagttgaaaa 1854 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1853 ttcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttc 1794 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 1793 tccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||||||||||||| |||||| || |||| |||||||||| ||||||||| || Sbjct: 315727 aagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaacc 315786 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || ||| |||||||||||||||||| |||||| | Sbjct: 315787 atggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagttgaaaa 315846 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 315847 ttcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttc 315906 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 315907 tccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcga 296 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 232 bits (117), Expect = 8e-58 Identities = 260/302 (86%), Gaps = 8/302 (2%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtgatcta 82 |||||||||| ||||||||| || |||||| |||||||||||||||| |||||||||| Sbjct: 659 aagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaacccgggtgatcta 718 Query: 83 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 142 | ||||||||||||||||||||| | | || ||| ||||||||||||||| |||||||| Sbjct: 719 ttcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttga 778 Query: 143 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 202 | |||| |||||||||||||| |||||| ||||| ||| |||||| | ||||||||||| Sbjct: 779 aaaatcggcggatgagttgtgaataggggagaaattccaatcgaactcggagctagctgg 838 Query: 203 ttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaaagc-a 258 ||||||||||||||||||||||||||| || || || || |||| |||||||||| | Sbjct: 839 atctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaaagcta 897 Query: 259 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 318 |||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| ||||| Sbjct: 898 ctgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaatacaagata 957 Query: 319 tg 320 || Sbjct: 958 tg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 369 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 423 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||||| |||| || |||| |||||||||| |||||||||| || Sbjct: 1659141 aagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatctaacc 1659200 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| | Sbjct: 1659201 atggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaa 1659260 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1659261 atcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 1659320 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 1659321 tccccgaaatacgttgaggcg 1659341 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||||| |||| || |||| |||||||||| |||||||||| || Sbjct: 1049603 aagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatctaacc 1049544 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| | Sbjct: 1049543 atggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaa 1049484 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1049483 atcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 1049424 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 1049423 tccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 308 aatac 312 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 308 aatac 312 ||||| Sbjct: 1049320 aatac 1049316 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| || |||| | || |||||||||||||||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtggg 1659543 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| || |||| | || |||||||||||||||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtggg 1049201
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 232 bits (117), Expect = 8e-58 Identities = 183/205 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||||| || Sbjct: 638 aagcaagtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatctaacc 697 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 |||||||||||||||||| | ||| ||| ||||||||||||||| ||||||||| | Sbjct: 698 atgaccaggatgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgttgaaaa 757 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| || ||||||||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 758 atcggctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttc 817 Query: 206 tccccgaaatgcgttgaggcgcagc 230 ||||||||||||||||||||||||| Sbjct: 818 tccccgaaatgcgttgaggcgcagc 842 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggt 445 |||||||||| ||||||||||| |||| ||||||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggt 1041 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 243 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 302 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 303 ctctgaatactagata 318 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||||| |||| || |||| |||||||||| |||||||||| || Sbjct: 903 aagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatctaacc 962 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| | Sbjct: 963 atggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaa 1022 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1023 atcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 1082 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 1083 tccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 308 aatac 312 ||||| Sbjct: 1186 aatac 1190 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| || |||| | || |||||||||||||||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtggg 1305
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||||| |||| | |||| |||||||||| |||||||||| || Sbjct: 2856 aagcgagtctgaatagggcgatggtcagtatttatagacccgaacccgggtgatctaacc 2915 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| ||| || | | ||||||||||||||||||||||||| | Sbjct: 2916 atggccaggatgaagcttgggtgataccacgtggaggtccgaaccgactgatgttgaaaa 2975 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 2976 atcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 3035 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||| ||||| Sbjct: 3036 tccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 248 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 306 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 307 gaatac 312 |||||| Sbjct: 3139 gaatac 3144
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||||| |||| || |||| |||||||||| |||||||||| || Sbjct: 2657645 aagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatctaacc 2657586 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| | Sbjct: 2657585 atggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaa 2657526 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 2657525 atcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 2657466 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 2657465 tccccgaaatacgttgaggcg 2657445 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 26 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 85 |||||||||| ||||||||||| |||| || |||| |||||||||| |||||||||| || Sbjct: 571276 aagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatctaacc 571335 Query: 86 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 145 ||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| | Sbjct: 571336 atggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaa 571395 Query: 146 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 205 ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 571396 atcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttc 571455 Query: 206 tccccgaaatgcgttgaggcg 226 |||||||||| |||||||||| Sbjct: 571456 tccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 308 aatac 312 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 248 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 307 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 308 aatac 312 ||||| Sbjct: 571559 aatac 571563 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| || |||| | || |||||||||||||||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtggg 2657243 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 348 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 407 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 408 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 448 |||||| || |||| | || |||||||||||||||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtggg 571678
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 230 bits (116), Expect = 3e-57 Identities = 237/278 (85%) Strand = Plus / Plus Query: 37 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 96 ||||| ||||| |||||| ||| |||||||||| || ||||||| ||||| ||||||| Sbjct: 2348 aatagagcgatagtcactatttacagacccgaacccggatgatctagccatggccaggat 2407 Query: 97 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 156 ||| ||| | | | |||||| ||||||||||||||||||||||||| ||||| |||||| Sbjct: 2408 gaaacttaggtaacactaagtggaggtccgaaccgactgatgttgaaaaatcaacggatg 2467 Query: 157 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 216 || ||||| ||| |||||||| ||| ||||| | ||||||||||||||||||||||||| Sbjct: 2468 agctgtggctagcggtgaaataccaatcgaattcggagctagctggttctccccgaaatg 2527 Query: 217 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 276 |||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| Sbjct: 2528 cgttgaggcgcagcggttgaaattaaacttaggggtaaagcactgtttcggtgcgggctg 2587 Query: 277 cgcgagcggtaccaaatcgaggcaaactctgaatacta 314 || || ||||||||||||| ||||||| |||||||| Sbjct: 2588 cgaaagyggtaccaaatcgatgcaaactaagaatacta 2625 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 350 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 409 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 410 aaggcccctaaat 422 ||||||||||||| Sbjct: 2700 aaggcccctaaat 2712
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 228 bits (115), Expect = 1e-56 Identities = 267/313 (85%), Gaps = 6/313 (1%) Strand = Plus / Plus Query: 13 cggagccgtagcgaa-gcgagtcttaatagggcgatt--gtcactgcttatggacccgaa 69 ||||||| ||||||| || ||||||||||||||||| |||||| |||||||||||||| Sbjct: 719 cggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccgaa 778 Query: 70 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 129 || ||||||||||| |||| |||||||||||||||| | | || || ||||||||||| Sbjct: 779 cccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaac 838 Query: 130 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 189 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 839 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 898 Query: 190 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatcta 247 | ||||||||||| ||||||||||||||||||||||||||| || | | | ||||| Sbjct: 899 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatcta 958 Query: 248 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 306 | |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 959 gaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactca 1018 Query: 307 gaatactagatat 319 ||||||||||||| Sbjct: 1019 gaatactagatat 1031 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 383 agagggaaacagcccggatcaccagctaaggcccctaaatga 424 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 226 bits (114), Expect = 5e-56 Identities = 190/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 226 bits (114), Expect = 5e-56 Identities = 190/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtggg 1775439 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtggg 376630 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 226 bits (114), Expect = 5e-56 Identities = 190/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 361 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 420 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 421 atgaccgctcagtgataaaggaggtggg 448 || | | || |||||||| ||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtggg 3292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 262 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 312 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 226 bits (114), Expect = 5e-56 Identities = 219/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| ||||| |||||||||||||| | | | |||||| ||| Sbjct: 301 gacccgaacccgggtgatctaaccatggccaggatgaagcttaggtaacactaagtggag 360 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 361 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 420 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 421 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 480 Query: 242 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 481 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 540 Query: 300 aaactctgaatac 312 |||||| |||||| Sbjct: 541 aaactcagaatac 553 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||| | | || ||||| |||||||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtggg 667
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 226 bits (114), Expect = 5e-56 Identities = 190/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 ggagccgtagcgaa-gcgagtcttaatagggcgattgtcactgcttatggacccgaacct 72 |||||| ||||||| |||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 73 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 132 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 133 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 192 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 193 agctagctggttctccccgaaatgcgttgaggcg 226 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 226 bits (114), Expect = 5e-56 Identities = 219/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| ||||| |||||||||||||| | | | |||||| ||| Sbjct: 3327698 gacccgaacccgggtgatctaaccatggccaggatgaagcttaggtaacactaagtggag 3327757 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 3327758 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 3327817 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 3327818 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 3327877 Query: 242 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 3327878 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 3327937 Query: 300 aaactctgaatac 312 |||||| |||||| Sbjct: 3327938 aaactcagaatac 3327950 Score = 226 bits (114), Expect = 5e-56 Identities = 219/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| ||||| |||||||||||||| | | | |||||| ||| Sbjct: 2451030 gacccgaacccgggtgatctaaccatggccaggatgaagcttaggtaacactaagtggag 2450971 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2450970 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2450911 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 2450910 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 2450851 Query: 242 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 299 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 2450850 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 2450791 Query: 300 aaactctgaatac 312 |||||| |||||| Sbjct: 2450790 aaactcagaatac 2450778 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||| | | || ||||| |||||||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtggg 3328064 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||| | | || ||||| |||||||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtggg 2450664
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 224 bits (113), Expect = 2e-55 Identities = 220/254 (86%), Gaps = 5/254 (1%) Strand = Plus / Plus Query: 62 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 121 |||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| ||| Sbjct: 2215 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 2274 Query: 122 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 181 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2275 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2334 Query: 182 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 241 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2335 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2392 Query: 242 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 298 | || ||||||||||||||||||| |||||||| | || |||||||| ||||| Sbjct: 2393 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgagg 2452 Query: 299 caaactctgaatac 312 |||||||||||||| Sbjct: 2453 caaactctgaatac 2466 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 349 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 408 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 409 taaggcccctaaatgaccgctcagtgataaaggaggtggg 448 ||||| ||| |||||| || ||||| |||||||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtggg 2580 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,821,363 Number of Sequences: 3902068 Number of extensions: 2821363 Number of successful extensions: 54876 Number of sequences better than 10.0: 2345 Number of HSP's better than 10.0 without gapping: 2287 Number of HSP's successfully gapped in prelim test: 85 Number of HSP's that attempted gapping in prelim test: 43472 Number of HSP's gapped (non-prelim): 10840 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)