Clone Name | basd2m20 |
---|---|
Clone Library Name | barley_pub |
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 120 bits (302), Expect = 6e-28 Identities = 63/113 (55%), Positives = 77/113 (68%) Frame = +1 Query: 70 MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAG 249 MA+L ++MLGT L+F SR ++AP A + F+ V+ +S Sbjct: 1 MASLGVSEMLGTPLNFRAVSR--SSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETS-- 56 Query: 250 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 DELAKWYGPDRRI+LP+GLLDRSE+PEYLNGEV GDYGYDPFGLGKKPE+F Sbjct: 57 --DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENF 107
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 54.7 bits (130), Expect = 5e-08 Identities = 34/91 (37%), Positives = 40/91 (43%) Frame = +1 Query: 136 ATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLL 315 A+ A TA + +V VA SA WYGPDR YL Sbjct: 2 ASMAATASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPF-- 59 Query: 316 DRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 ++ P YLNGE PGDYG+D GL PE F Sbjct: 60 -SAQTPSYLNGEFPGDYGWDTAGLSADPEAF 89
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 53.5 bits (127), Expect = 1e-07 Identities = 27/46 (58%), Positives = 29/46 (63%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR +YL G L E P YL GE PGDYG+D GL PE F Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 53.5 bits (127), Expect = 1e-07 Identities = 27/46 (58%), Positives = 29/46 (63%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR +YL G L E P YL GE PGDYG+D GL PE F Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/46 (54%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR +YL E P YL GE PGDYG+D GL PE+F Sbjct: 58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENF 100
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 52.4 bits (124), Expect = 3e-07 Identities = 28/56 (50%), Positives = 32/56 (57%) Frame = +1 Query: 241 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 +A ID + WYGPDR +YL E P YL GE PGDYG+D GL PE F Sbjct: 55 AASID---SPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 104
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 52.0 bits (123), Expect = 3e-07 Identities = 28/56 (50%), Positives = 32/56 (57%) Frame = +1 Query: 241 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 +A ID + WYGPDR +YL E P YL GE PGDYG+D GL PE F Sbjct: 55 AASID---SPWYGPDRVMYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 104
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 52.0 bits (123), Expect = 3e-07 Identities = 25/46 (54%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL ++ P YLNGE PGDYG+D GL PE F Sbjct: 50 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAF 92
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 6e-07 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL ++P YL GE PGDYG+D GL PE F Sbjct: 49 WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 6e-07 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL ++P YL GE PGDYG+D GL PE F Sbjct: 49 WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 51.2 bits (121), Expect = 6e-07 Identities = 28/58 (48%), Positives = 31/58 (53%) Frame = +1 Query: 235 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 T A + D + WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 38 TVKAPVSD--SPWYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETF 90
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/47 (48%), Positives = 30/47 (63%) Frame = +1 Query: 268 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 ++YGPDR +L G ++ PEYL GE PGDYG+D GL P+ F Sbjct: 32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTF 76
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 50.8 bits (120), Expect = 7e-07 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETF 92
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 50.8 bits (120), Expect = 7e-07 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 50.8 bits (120), Expect = 7e-07 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 50.4 bits (119), Expect = 1e-06 Identities = 26/46 (56%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR +YL G L E P YL GE PGDYG+D GL PE F Sbjct: 49 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 50.4 bits (119), Expect = 1e-06 Identities = 26/46 (56%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR +YL G L E P YL GE PGDYG+D GL PE F Sbjct: 50 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETF 92
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 50.4 bits (119), Expect = 1e-06 Identities = 35/95 (36%), Positives = 41/95 (43%) Frame = +1 Query: 124 SSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLP 303 +S A ++P AG K V L + S A + WYGPDR YL Sbjct: 3 ASTTALSSPFAG--KAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60 Query: 304 NGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 E P YL GE PGDYG+D GL PE F Sbjct: 61 PF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 92
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 50.4 bits (119), Expect = 1e-06 Identities = 26/46 (56%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR +YL G L E P YL GE PGDYG+D GL PE F Sbjct: 45 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETF 87
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 46 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 88
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 50 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 92
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 53 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 95
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 29 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 71
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 48 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 90
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 50.1 bits (118), Expect = 1e-06 Identities = 24/46 (52%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL + P YL GE PGDYG+D GL PE F Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 90
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 47 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 89
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 50.1 bits (118), Expect = 1e-06 Identities = 24/46 (52%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL + P YL GE PGDYG+D GL PE F Sbjct: 47 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 89
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 52 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 94
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/46 (54%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL PE F Sbjct: 39 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 81
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 49.3 bits (116), Expect = 2e-06 Identities = 26/46 (56%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR +YL G L S P YL GE PGDYG+D GL PE F Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETF 90
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 49.3 bits (116), Expect = 2e-06 Identities = 27/56 (48%), Positives = 31/56 (55%) Frame = +1 Query: 241 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 SAGI+ WYGPDR +L + P YL GE PGDYG+D GL PE F Sbjct: 34 SAGIE-----WYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETF 81
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/46 (54%), Positives = 28/46 (60%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR +YL G S P YL+GE PGDYG+D GL PE F Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETF 91
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE P DYG+D GL PE F Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETF 93
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D GL P F Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATF 92
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 48.1 bits (113), Expect = 5e-06 Identities = 24/46 (52%), Positives = 26/46 (56%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGP+R YL E P YL GE PGDYG+D GL PE F Sbjct: 51 WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 93
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 47.8 bits (112), Expect = 6e-06 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL E P YL GE PGDYG+D L PE F Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETF 93
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/46 (50%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL + P YL GE PGDYG+D GL PE F Sbjct: 21 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 63
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 47.0 bits (110), Expect = 1e-05 Identities = 25/59 (42%), Positives = 33/59 (55%) Frame = +1 Query: 232 ATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 A S+G++ +YGP+R +L G + P YL GE PGDYG+D GL PE F Sbjct: 28 APKSSGVE-----FYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETF 79
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/58 (46%), Positives = 30/58 (51%) Frame = +1 Query: 235 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 + SAG D WYG DR +L E P YLNGE GDYG+D GL PE F Sbjct: 43 SKSAGSD---TIWYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETF 94
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/46 (50%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL + P YL GE PGDYG+D GL PE F Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/46 (50%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL + P YL GE PGDYG+D GL PE F Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/46 (50%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL + P YL GE PGDYG+D GL PE F Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL E P YL GE PGDYG+D GL PE F Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 92
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL E P YL GE PGDYG+D GL PE F Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 92
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR YL E P YL GE PGDYG+D GL PE F Sbjct: 49 WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETF 91
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 46.6 bits (109), Expect = 1e-05 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +1 Query: 280 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 PDR ++ P S PE+L+G +PGD+G+DP GLG PE Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPE 98
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 45.8 bits (107), Expect = 2e-05 Identities = 23/46 (50%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYGPDR YL G P YL GE PGDYG+D + PE F Sbjct: 50 WYGPDRPKYL--GPFSEG-TPSYLTGEFPGDYGWDTAAVSADPETF 92
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 45.4 bits (106), Expect = 3e-05 Identities = 22/46 (47%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 WYG DR +L + P YL GE PGDYG+D GL PE F Sbjct: 48 WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETF 90
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 45.4 bits (106), Expect = 3e-05 Identities = 23/46 (50%), Positives = 25/46 (54%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 W+GPD YL E P YL GE PGDYG+D GL PE F Sbjct: 12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETF 54
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = +1 Query: 265 AKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 AK DR ++ P ++ PEYL+G + GDYG+DPFGLGK E Sbjct: 45 AKTVISDRPLWFPG-----AKSPEYLDGSLVGDYGFDPFGLGKPAE 85
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = +1 Query: 331 PEYLNGEVPGDYGYDPFGLGKKP 399 PE+L+G +PGDYG+DP GLGK P Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDP 90
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 42.0 bits (97), Expect = 3e-04 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +1 Query: 280 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 PDR ++ P S P +L+G +PGD+G+DP GL PE Sbjct: 63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPE 98
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 42.0 bits (97), Expect = 3e-04 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +1 Query: 331 PEYLNGEVPGDYGYDPFGLGKKP 399 PE+L+G +PGD+G+DP GLGK P Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDP 95
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 42.0 bits (97), Expect = 3e-04 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +1 Query: 331 PEYLNGEVPGDYGYDPFGLGKKP 399 PE+L+G +PGD+G+DP GLGK P Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDP 90
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 41.2 bits (95), Expect = 6e-04 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +1 Query: 283 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 DR ++ P + P++L+G + GDYG+DPFGLGK E Sbjct: 54 DRPLWYPGAIS-----PDWLDGSLVGDYGFDPFGLGKPAE 88
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = +1 Query: 325 EVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 E P YL GE PGDYG+D GL PE F Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETF 32
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = +1 Query: 325 EVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 E P YL GE PGDYG+D GL PE F Sbjct: 68 EWPSYLTGEFPGDYGWDTAGLSAYPETF 95
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +1 Query: 283 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 DR ++ P + PE+L+G + GD G+DPFGLGK E Sbjct: 55 DRLVWFPG-----ANPPEWLDGSMIGDRGFDPFGLGKPAE 89
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = +1 Query: 292 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 ++LPN + PE+L+G +PGD G+DP GL K E Sbjct: 51 LWLPN-----TTRPEWLDGSLPGDRGFDPLGLSKPSE 82
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 36.6 bits (83), Expect = 0.015 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 331 PEYLNGEVPGDYGYDPFGLGKKP 399 P YL+G PGD+G+D GLG+ P Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVP 78
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 36.2 bits (82), Expect = 0.019 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = +1 Query: 268 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 ++YGPD +G + + P GE PGDYG+D GL PE F Sbjct: 56 QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 36.2 bits (82), Expect = 0.019 Identities = 23/73 (31%), Positives = 32/73 (43%) Frame = +1 Query: 187 RFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDY 366 R N TSS ++ + +W LP GL P+YL G + GD Sbjct: 29 RLNRDLSFTSIGSSAKTSSFKVEAKKGEW--------LP-GLAS----PDYLTGSLAGDN 75 Query: 367 GYDPFGLGKKPED 405 G+DP GL + PE+ Sbjct: 76 GFDPLGLAEDPEN 88
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 35.8 bits (81), Expect = 0.025 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 292 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 ++ PN L P +LNGE GD G+DP GL P+ F Sbjct: 4 LWFPNTL-----APSWLNGEYYGDRGFDPAGLAADPDTF 37 Score = 34.3 bits (77), Expect = 0.072 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = +1 Query: 283 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 408 +R ++ PN + P YL GE GD G+DP GL P F Sbjct: 370 ERELWFPNIV-----PPRYLTGEAYGDKGFDPAGLAADPVTF 406 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 292 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 ++ PN +E P L GE P D G+DP L P+ Sbjct: 189 LWFPN-----AEPPALLTGEYPADRGFDPLNLAADPD 220
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 32.7 bits (73), Expect = 0.21 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 337 YLNGEVPGDYGYDPFGL 387 YL+G +PGD+G+DP GL Sbjct: 65 YLDGRLPGDFGFDPLGL 81
>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1181 Score = 30.4 bits (67), Expect = 1.0 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATILLVWARSQRTS 409 +SP+ T G P+ + R TST + ETTAT ++ RS+RT+ Sbjct: 177 SSPTHTREEGRMHTPSPAGAPRTISPTSTEKDSETTATYRMLEPRSERTA 226
>NLPD_SALTY (P40827) Lipoprotein nlpD precursor| Length = 377 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 349 N P+GT +T T PT S T STST+ Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252
>NLPD_SALDU (P39700) Lipoprotein nlpD precursor| Length = 377 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 349 N P+GT +T T PT S T STST+ Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252
>UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase ubiE (EC| 2.1.1.-) Length = 245 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 Query: 372 VAVVSGNLAVEVLRHLRPVKEAVGQVDPPVRAVPLGE 262 VA +G+LA+E+ RH+ VK+ G VD + + +GE Sbjct: 65 VATGTGDLAIEICRHIPSVKQVTG-VDLSLEMMRIGE 100
>NLPD_SALTI (Q56131) Lipoprotein nlpD precursor| Length = 373 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 349 N P+GT +T T PT S T STST+ Sbjct: 219 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 248
>INLA_LISMF (Q723K6) Internalin A precursor| Length = 800 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 376 N+P T G +T P+A++ G +TST TT+T+ Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSNTSNTSTGNSASTTSTM 754
>PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EIICBA component| [Includes: Glucosamine permease IIC component (PTS system glucosamine-specific EIIC component); Glucosamine-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS Length = 631 Score = 28.9 bits (63), Expect = 3.0 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = -1 Query: 170 IFCAPAVGAAVAYLEEPAKSSRVPSILVGAS 78 IFC PAV A+ + P K + +++ A+ Sbjct: 252 IFCLPAVALAIIHTARPEKKKMISGVMISAA 282
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/44 (43%), Positives = 19/44 (43%) Frame = +1 Query: 271 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 402 WYGPDR YL E P YL GE G DP K E Sbjct: 48 WYGPDRVKYLGP---FSGEAPSYLTGEFHG-LSADPETFAKNRE 87
>INLA_LISMO (P25146) Internalin A precursor| Length = 800 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 376 N+P T G +T P+A++ G +TST TT+T+ Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTM 754
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 322 SEVPEYLNGEVPGDYGYDPFGLGKKP 399 ++ P +L GE P D G+DP + P Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADP 191
>C8AP2_HUMAN (Q9UKL3) CASP8-associated protein 2 (FLICE-associated huge protein)| Length = 1982 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -3 Query: 336 LRHLRPVKEAVGQVDPPVRAV 274 L HLRP+ EA+ ++ PVR V Sbjct: 847 LNHLRPIPEAISPLNSPVRPV 867
>NLPD_SHIFL (P0ADA4) Lipoprotein nlpD precursor| Length = 379 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 349 N P+ T +T T PTAS T STST+ Sbjct: 225 NKPTATTVTAPVTVPTASTTEPTVSSTSTS 254
>NLPD_ECOLI (P0ADA3) Lipoprotein nlpD precursor| Length = 379 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 349 N P+ T +T T PTAS T STST+ Sbjct: 225 NKPTATTVTAPVTVPTASTTEPTVSSTSTS 254
>YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5| Length = 1216 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +2 Query: 260 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTAT 373 ++P TA T ST P+A+LT ST++ PET+ T Sbjct: 825 STPLETASTSQST-PSATLTSTTENIPSTSKIPETSTT 861
>THTM_ECOLI (P31142) 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2)| (Rhodanese-like protein) (MST) Length = 280 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +1 Query: 283 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYD 375 D R+ P G DR+ EYLNG +PG +D Sbjct: 24 DARMASP-GQEDRNVAQEYLNGHIPGAVFFD 53
>THTM_ECO57 (P58388) 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2)| (Rhodanese-like protein) (MST) Length = 280 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +1 Query: 283 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYD 375 D R+ P G DR+ EYLNG +PG +D Sbjct: 24 DARMASP-GQEDRNVAQEYLNGHIPGAVFFD 53
>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)| Length = 383 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 79 APPLPQAQGWEGEGACSRGACSAL 8 APPLP AQG G G + G +A+ Sbjct: 209 APPLPTAQGTSGGGTGAPGLAAAI 232
>AGLU_TETPY (O00906) Lysosomal acid alpha-glucosidase precursor (EC 3.2.1.20)| (Acid maltase) Length = 923 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Frame = +1 Query: 301 PNGL-LDRSEVPEYLNGEV--------PGDYGYDPFGLGKKPEDF 408 P+G +D +E ++NGE+ PGD +P LG EDF Sbjct: 449 PSGFWIDMNEFSNFINGEISEDQNCIMPGDTTTNPNYLGNSVEDF 493
>S3TC2_MOUSE (Q80VA5) SH3 domain and tetratricopeptide repeats-containing| protein 2 Length = 1289 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 70 LPQAQGWEGEGACSRGACSALV 5 LP+ + W G G RG C AL+ Sbjct: 255 LPRKRDWTGSGQIGRGRCKALM 276
>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)| Length = 379 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 Query: 79 APPLPQAQGWEGEGACSRGACSAL 8 APPLP AQG G GA + G +A+ Sbjct: 206 APPLPAAQGPGGGGAGAPGLAAAI 229
>IL1FA_MOUSE (Q8R459) Interleukin-1 family member 10 (IL-1F10)| Length = 152 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 Query: 274 YGPDRRIYLPNGLLDRSEVPEYL 342 Y P++ LPN LDRS+VP +L Sbjct: 37 YSPEKVCILPNRGLDRSKVPIFL 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,847,589 Number of Sequences: 219361 Number of extensions: 715417 Number of successful extensions: 1929 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 1847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1888 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)