Clone Name | basd2m01 |
---|---|
Clone Library Name | barley_pub |
>ACOX3_ARATH (Q9LLH9) Acyl-coenzyme A oxidase 3, peroxisomal precursor (EC| 1.3.3.6) (AOX 3) (Medium-chain acyl-CoA oxidase) (AtCX3) Length = 675 Score = 139 bits (350), Expect = 2e-33 Identities = 67/113 (59%), Positives = 89/113 (78%) Frame = +3 Query: 6 TRLTSDILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLARA 185 T+LTS LR S+FQ ++FCLRERDLL+QFT EV++ +GESRE + +LS+Q+AEDL +A Sbjct: 513 TQLTSSTLRCSQFQTNVFCLRERDLLEQFTSEVAQLQGRGESREFSFLLSHQLAEDLGKA 572 Query: 186 FTERTILQIFLEDEMNAPAGSLKDVLGLLRSMYVMVCIDESASFLRYGYLSRD 344 FTE+ ILQ L+ E P GS+KDVLGL+RSMY ++ ++E S LRYGYLS+D Sbjct: 573 FTEKAILQTILDAEAKLPTGSVKDVLGLVRSMYALISLEEDPSLLRYGYLSQD 625
>ACO32_ARATH (Q9LMI7) Putative acyl-coenzyme A oxidase 3.2, peroxisomal| precursor (EC 1.3.3.6) Length = 675 Score = 133 bits (334), Expect = 1e-31 Identities = 64/113 (56%), Positives = 87/113 (76%) Frame = +3 Query: 6 TRLTSDILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLARA 185 T+LTS LR S+FQ +FCLRERDLL++FT EV+ +GESRE +L++Q++EDL++A Sbjct: 513 TQLTSSTLRCSQFQKSVFCLRERDLLERFTSEVAELQGRGESREFLFLLNHQLSEDLSKA 572 Query: 186 FTERTILQIFLEDEMNAPAGSLKDVLGLLRSMYVMVCIDESASFLRYGYLSRD 344 FTE+ ILQ L+ E P GS+KDVLGL+RSMY ++ ++E S LRYG+LSRD Sbjct: 573 FTEKAILQTVLDAEAKLPPGSVKDVLGLVRSMYALISLEEDPSLLRYGHLSRD 625
>ACOX3_MOUSE (Q9EPL9) Acyl-coenzyme A oxidase 3, peroxisomal (EC 1.3.3.6)| (Pristanoyl-CoA oxidase) (Branched-chain acyl-CoA oxidase) (BRCACox) Length = 700 Score = 33.5 bits (75), Expect = 0.13 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +3 Query: 174 LARAFTERTILQIFLED-EMNAPAGSLKDVLGLLRSMYVMVCIDE-SASFLRYGYLSRDK 347 LA AF E T++Q F E + + SL+ VLG L S+Y + C+ + A R GY+S ++ Sbjct: 558 LALAFMELTVMQRFHEHIHSSGLSPSLRTVLGRLSSVYGLWCLSQHMALSYRGGYISGEQ 617 Query: 348 CSHREE 365 E Sbjct: 618 TGRAME 623
>CNGA3_HUMAN (Q16281) Cyclic nucleotide-gated cation channel alpha 3 (CNG| channel alpha 3) (CNG-3) (CNG3) (Cyclic nucleotide-gated channel alpha 3) (Cone photoreceptor cGMP-gated channel alpha subunit) Length = 694 Score = 32.7 bits (73), Expect = 0.22 Identities = 24/61 (39%), Positives = 33/61 (54%) Frame = +3 Query: 3 GTRLTSDILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLAR 182 G R T++I RS + DLFCL + DL++ T+ A E + LM I E+LAR Sbjct: 561 GNRRTANI-RSIGYS-DLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAR 618 Query: 183 A 185 A Sbjct: 619 A 619
>CNGA3_MOUSE (Q9JJZ8) Cyclic nucleotide-gated cation channel alpha 3 (CNG| channel alpha 3) (CNG-3) (CNG3) (Cyclic nucleotide-gated channel alpha 3) (Cone photoreceptor cGMP-gated channel alpha subunit) Length = 631 Score = 31.6 bits (70), Expect = 0.48 Identities = 30/107 (28%), Positives = 51/107 (47%) Frame = +3 Query: 3 GTRLTSDILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLAR 182 G R T++I RS + DLFCL + DL++ T+ A E + LM I EDL Sbjct: 502 GNRRTANI-RSIGYS-DLFCLSKDDLMEALTEYPDAKRALEEKGRQILMKDNLIDEDLVA 559 Query: 183 AFTERTILQIFLEDEMNAPAGSLKDVLGLLRSMYVMVCIDESASFLR 323 A + ++ +E L+ L +L++ + + + SAS ++ Sbjct: 560 ARVDTRDVEEKVE--------YLESSLDILQTRFARLLAEYSASQMK 598
>CNGA3_BOVIN (Q29441) Cyclic nucleotide-gated cation channel alpha 3 (CNG| channel alpha 3) (CNG-3) (CNG3) (Cyclic nucleotide-gated channel alpha 3) (Cone photoreceptor cGMP-gated channel alpha subunit) Length = 706 Score = 31.6 bits (70), Expect = 0.48 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = +3 Query: 3 GTRLTSDILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLAR 182 G R T++I RS + DLFCL + DL++ T+ A E + LM I E+LA+ Sbjct: 580 GNRRTANI-RSIGYS-DLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAK 637 Query: 183 A 185 A Sbjct: 638 A 638
>ACOX2_ARATH (O65201) Acyl-coenzyme A oxidase 2, peroxisomal precursor (EC| 1.3.3.6) (AOX 2) (Long-chain acyl-CoA oxidase) (AtCX2) Length = 692 Score = 30.8 bits (68), Expect = 0.83 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = +3 Query: 21 DILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQ-GESREKALMLSYQIAEDLARAFTER 197 D LR KFQ+D F R LL+ + ++ G L++ + LA + E Sbjct: 531 DHLRDPKFQLDAFRYRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLT--LAESHIET 588 Query: 198 TILQIFLEDEMNAPAGSLKDVLGLLRSMYVM 290 IL F+E N P S K L L +Y + Sbjct: 589 VILAKFIEAVKNCPDPSAKAALKLACDLYAL 619
>DNAA_DESPS (Q6ARL8) Chromosomal replication initiator protein dnaA| Length = 479 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +3 Query: 72 RDLLK-QFTDEVSRYLAQGESREKALMLSYQIAEDLARAFTERTILQI 212 RDL+ QF +VS Q SR+K++ L QIA L+R FTE ++ +I Sbjct: 392 RDLISAQF--QVSVEDLQSRSRKKSISLPRQIAMYLSRKFTEESLAEI 437
>GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061| Length = 88 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +3 Query: 57 FCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLARAFTERTILQIFLEDE 227 FC+R LLK+ E Y G++ + M ARA +R++ QIF++D+ Sbjct: 17 FCMRALALLKRKGVEFQEYCIDGDNEAREAM--------AARANGKRSLPQIFIDDQ 65
>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3| (WASP-family protein member 3) (WAVE-3 protein) (Verprolin homology domain-containing protein 3) Length = 502 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -2 Query: 354 DYICPATNNHISEKMQIHLCTP*HT*TSVSPIHPLKNQQEHSSRPPKIFAK 202 DY PAT NH + TP + V P P EH RPP A+ Sbjct: 247 DYSYPATPNHSLHPQPV---TPSYAAGDVPPHGPASQAAEHEYRPPSASAR 294
>CNG1_CHICK (Q90805) Cyclic nucleotide-gated channel, cone photoreceptor,| subunit alpha (CNG channel 1) (CNG-1) Length = 735 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +3 Query: 3 GTRLTSDILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDLAR 182 G R T++I RS + DLFCL + DL++ T+ A E + LM I E+ A+ Sbjct: 603 GNRRTANI-RSIGYS-DLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEEAAK 660 Query: 183 A 185 A Sbjct: 661 A 661
>Y006_METJA (Q60314) Hypothetical protein MJ0006| Length = 378 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -1 Query: 292 TITYIDLSKPNTSFKEPAGAFISSSKNICKIVRSVNALAKSSAIW 158 T D+ P+T + E G FI++ K I KI ++VN + W Sbjct: 302 TAEMADVVLPSTCWAEKDGTFINTDKRIQKINKAVNPPGDAMDDW 346
>DYHC_ASHGO (Q9C1M7) Dynein heavy chain, cytosolic (DYHC)| Length = 4083 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 20/94 (21%) Frame = +3 Query: 9 RLTSDILRSSKFQMDL-----FCLRERDLLKQFTD--------------EVSRYLAQGES 131 R+ + + + + + DL CLR+ DL+ + D EV+ L+Q S Sbjct: 1098 RIPQNFIHAEQIESDLVSLREICLRKEDLINKNRDAISNKLEAELLKIQEVANSLSQSWS 1157 Query: 132 REKALMLSYQIAEDLARAFT-ERTILQIFLEDEM 230 ++K L +S Q +E L+ T E +I ++ E E+ Sbjct: 1158 KKKPLSVSIQPSEALSVLNTFEDSIAKVNTEREL 1191
>TM16F_HUMAN (Q4KMQ2) Transmembrane protein 16F| Length = 910 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 261 LGLLRSMYVMVCIDESASFLRYGYLSRDKCSHREERSHDTV 383 LG M ++ + A FL YGYL++D C+ +E H + Sbjct: 302 LGYYTQMLLLAAVVGVACFL-YGYLNQDNCTWSKEVCHPDI 341
>ISPG_CHLCV (Q823I7) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 606 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -1 Query: 295 HTITYIDLSKPNTSFK-EPAGAFISSSKNICK 203 HT TY+DL K F E + F+++SK I K Sbjct: 290 HTTTYLDLPKKENPFALENSETFVNASKKITK 321
>UVRB_RHOBA (Q7UFR2) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 708 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +3 Query: 99 EVSRYLAQGESREKALMLSYQIAEDLARAFTERTILQIFLEDEMNA 236 E R A+ + R L+ ++AEDLA F E+ + +L E+NA Sbjct: 442 EQVRIRAERDERVLVTALTKRLAEDLATYFQEQGVKCRWLHSELNA 487
>Y2793_RHIME (Q92M59) UPF0335 protein R02793| Length = 90 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +3 Query: 153 SYQIAEDLARAFTERTILQIFLEDEMNAPAGSLKDVLGLLRSM 281 ++ IA D RAF ER LE+E A +KDV G +SM Sbjct: 4 AHGIARDQLRAFIERIER---LEEEKKTIADDIKDVYGEAKSM 43
>EFGL_THEMA (Q9X1Y4) Elongation factor G-like protein| Length = 683 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/52 (26%), Positives = 27/52 (51%) Frame = +3 Query: 21 DILRSSKFQMDLFCLRERDLLKQFTDEVSRYLAQGESREKALMLSYQIAEDL 176 D+L+ ++ D ++E D+ + F D S L +++ LM+ Y ED+ Sbjct: 169 DLLKKKAYRYDGDKVQEEDMPESFNDMRSEILEDIVEQDEELMMRYLDGEDI 220
>CLPP1_PROMP (Q7V1W0) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 196 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 15/76 (19%) Frame = +3 Query: 132 REKALMLSYQIAEDLARAFTERTILQIFLEDE---------MNAPAGSLKDVLGLLRSMY 284 RE+ + L Q+ D A + + FLE E +N+P GS+ D LG+ +M Sbjct: 24 RERIIFLGEQVTSDTANRIVAQLL---FLEAEDPEKDIYMYINSPGGSVYDGLGIFDTMQ 80 Query: 285 VM------VCIDESAS 314 + VC+ +AS Sbjct: 81 HVKPDIHTVCVGLAAS 96
>GOG8A_HUMAN (Q9NZW0) Golgin subfamily A member 8A/B (Golgi autoantigen| golgin-67) (88 kDa Golgi protein) (Gm88 autoantigen) Length = 460 Score = 27.7 bits (60), Expect = 7.0 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +3 Query: 129 SREKALMLSYQIAEDLARAFTERTILQIFLEDEMNAPAGSLKDVLGLLRSMYVMVCIDES 308 SR KAL L R + QI L+ + SLK+V L R Y E Sbjct: 49 SRSKAL---------LKRQLEQSIREQILLKGHVTQLKESLKEVQ-LERDQYAEQIKGER 98 Query: 309 ASFL-RYGYLSRDKCSHREERSHDT 380 A + R +S++ C+ +EE+ HDT Sbjct: 99 AQWQQRMRKMSQEVCTLKEEKKHDT 123
>ESRB2_CARAU (Q9IAL9) Estrogen receptor beta-2 (ER-beta-2)| Length = 610 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 202 HNDYICPATNQCTIDKSRRKSC 223
>EMP24_YEAST (P32803) Endosomal P24B protein precursor (24 kDa endomembrane| protein) (Basic 24 kDa late endocytic intermediate component) Length = 203 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = -1 Query: 316 KDADSSMHTITYIDLSKPNTSFKEPAGAFISSSKNICKIVRSV 188 KD ++H + Y+DL PNT+ + S+ + + K+ R V Sbjct: 110 KDVTFNIHGVVYVDLDDPNTNTLD------SAVRKLSKLTREV 146
>ISPG_CHLAB (Q5L669) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 606 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -1 Query: 295 HTITYIDLSKPNTSFK-EPAGAFISSSKNICK 203 HT TY++L + N F E + +F+++SK I K Sbjct: 290 HTTTYLNLPRKNNPFALENSESFVNASKKITK 321
>ESR2_ORENI (Q9YH32) Estrogen receptor beta (ER-beta)| Length = 557 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 186 HNDYICPATNQCTIDKNRRKSC 207
>ESRB1_CARAU (Q9W669) Estrogen receptor beta-1 (ER-beta-1)| Length = 568 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 201 HNDYICPATNQCTIDKNRRKSC 222
>ESR2_SPAAU (Q9W6M2) Estrogen receptor beta (ER-beta)| Length = 559 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 187 HNDYICPATNQCTIDKNRRKSC 208
>ESR2_PIG (Q9XSW2) Estrogen receptor beta (ER-beta)| Length = 526 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 177 HNDYICPATNQCTIDKNRRKSC 198
>ESR2_ONCMY (P57782) Estrogen receptor beta (ER-beta)| Length = 568 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 209 HNDYICPATNQCTIDKNRRKSC 230
>ESR2_ICTPU (Q9IAK1) Estrogen receptor beta (ER-beta)| Length = 575 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 192 HNDYICPATNQCTIDKNRRKSC 213
>MUTS_CHLTR (O84797) DNA mismatch repair protein mutS| Length = 820 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -3 Query: 209 LQNCALGKCSS*VFSNLVAQHQSLFSAFPLCQIARYLVCELFQQIPLPQAE 57 LQNCAL + F L+A PLC + + L EL Q++PL +E Sbjct: 383 LQNCALPEFLENKF--LIAP--------PLCSLIKTLSTELIQELPLKVSE 423
>MUTS_CHLTA (Q3KKQ0) DNA mismatch repair protein mutS| Length = 820 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -3 Query: 209 LQNCALGKCSS*VFSNLVAQHQSLFSAFPLCQIARYLVCELFQQIPLPQAE 57 LQNCAL + F L+A PLC + + L EL Q++PL +E Sbjct: 383 LQNCALPEFLENKF--LIAP--------PLCSLIKTLSTELIQELPLKVSE 423
>ESR2_COTJA (O93511) Estrogen receptor beta (ER-beta)| Length = 472 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 136 HNDYICPATNQCTIDKNRRKSC 157
>ESR2_CHICK (Q9PTU5) Estrogen receptor beta (ER-beta) (cERb)| Length = 472 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 136 HNDYICPATNQCTIDKNRRKSC 157
>ESR2_MICUN (P57781) Estrogen receptor beta (ER-beta)| Length = 673 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 213 HNDYICPATNQCTIDKNRRKSC 234
>ESR2_SHEEP (Q9TU15) Estrogen receptor beta (ER-beta)| Length = 527 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 177 HNDYICPATNQCTIDKNRRKSC 198
>ESR2_BOVIN (Q9XSB5) Estrogen receptor beta (ER-beta)| Length = 527 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 177 HNDYICPATNQCTIDKNRRKSC 198
>CEND1_HUMAN (Q8WZ64) Centaurin-delta 1 (Cnt-d1) (Arf-GAP, Rho-GAP, ankyrin| repeat and pleckstrin homology domain-containing protein 2) (PARX protein) Length = 1704 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = -1 Query: 82 SKSRSLKQNKSIWNLELLNMSLV 14 SK RSLK + SIW+ EL+ + +V Sbjct: 735 SKVRSLKMDASIWSNELIELFIV 757
>ESR2_STUVU (Q9PVE2) Estrogen receptor beta (ER-beta)| Length = 554 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 205 HNDYICPATNQCTIDKNRRKSC 226
>ESR2_RAT (Q62986) Estrogen receptor beta (ER-beta)| Length = 530 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 180 HNDYICPATNQCTIDKNRRKSC 201
>ESR2_MOUSE (O08537) Estrogen receptor beta (ER-beta)| Length = 530 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 180 HNDYICPATNQCTIDKNRRKSC 201
>ESR2_HUMAN (Q92731) Estrogen receptor beta (ER-beta)| Length = 530 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 180 HNDYICPATNQCTIDKNRRKSC 201
>ESR2_CALJA (Q95171) Estrogen receptor beta (ER-beta)| Length = 530 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 360 HGDYICPATNNHISEKMQIHLC 295 H DYICPATN +K + C Sbjct: 180 HNDYICPATNQCTIDKNRRKSC 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,720,565 Number of Sequences: 219361 Number of extensions: 1064247 Number of successful extensions: 3070 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3028 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3067 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)