Clone Name | basd2n13 |
---|---|
Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 63.5 bits (153), Expect = 2e-10 Identities = 29/35 (82%), Positives = 31/35 (88%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGPL 105 G+ARV RKT AKAKQV+S SPWYGSDRVLYLGPL Sbjct: 28 GDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPL 62
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/36 (83%), Positives = 30/36 (83%), Gaps = 1/36 (2%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVAS-GSPWYGSDRVLYLGPL 105 GEARVT RKT AKAK AS GSPWYG DRVLYLGPL Sbjct: 26 GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPL 61
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/36 (83%), Positives = 30/36 (83%), Gaps = 1/36 (2%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVA-SGSPWYGSDRVLYLGPL 105 GEARVT RKT AKAK A SGSPWYG DRVLYLGPL Sbjct: 26 GEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPL 61
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 59.7 bits (143), Expect = 2e-09 Identities = 26/35 (74%), Positives = 29/35 (82%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGPL 105 GE R+T RK+ AK K ASGSPWYG+DRVLYLGPL Sbjct: 23 GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPL 57
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 59.3 bits (142), Expect = 3e-09 Identities = 26/35 (74%), Positives = 28/35 (80%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGPL 105 GE R+T RKT AK K SGSPWYG+DRVLYLGPL Sbjct: 26 GEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPL 60
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 58.2 bits (139), Expect = 7e-09 Identities = 28/36 (77%), Positives = 30/36 (83%), Gaps = 1/36 (2%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVAS-GSPWYGSDRVLYLGPL 105 GEAR+T RKT AK K AS GSPWYG+DRVLYLGPL Sbjct: 26 GEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPL 61
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 55.1 bits (131), Expect = 6e-08 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G +VT RKT +KAK V+SGSPWYG DRV YLGP Sbjct: 28 GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGP 61
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 55.1 bits (131), Expect = 6e-08 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G +VT RKT +KAK V+SGSPWYG DRV YLGP Sbjct: 29 GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGP 62
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 54.3 bits (129), Expect = 9e-08 Identities = 24/34 (70%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 GE R+T RKT K K ASGSPWYG DRV YLGP Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGP 57
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 54.3 bits (129), Expect = 9e-08 Identities = 24/34 (70%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RVT RKT KAK +SGSPWYG DRV YLGP Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGP 62
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/34 (70%), Positives = 26/34 (76%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G +VT RKT KAK V+SGSPWYG DRV YLGP Sbjct: 28 GNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGP 61
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G +VT RKT KAK ++SGSPWYG DRV YLGP Sbjct: 29 GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGP 62
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/34 (67%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G + T RKT KAK V+SGSPWYG DRV YLGP Sbjct: 29 GNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGP 62
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 52.8 bits (125), Expect = 3e-07 Identities = 23/34 (67%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G + T RKT KAK V+SGSPWYG DRV YLGP Sbjct: 28 GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGP 61
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 52.8 bits (125), Expect = 3e-07 Identities = 23/34 (67%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G + T RKT KAK V+SGSPWYG DRV YLGP Sbjct: 29 GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGP 62
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 52.4 bits (124), Expect = 4e-07 Identities = 23/34 (67%), Positives = 24/34 (70%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 GE R+T RKT K K V S SPWYG DRV YLGP Sbjct: 29 GEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGP 62
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 5e-07 Identities = 23/31 (74%), Positives = 25/31 (80%) Frame = +1 Query: 10 RVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 +VT RKT KAK V+SGSPWYG DRV YLGP Sbjct: 31 KVTMRKTVTKAKPVSSGSPWYGPDRVKYLGP 61
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 50.8 bits (120), Expect = 1e-06 Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G +VT RKT +KAK V+S SPWYG +RV YLGP Sbjct: 29 GNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGP 62
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/34 (64%), Positives = 24/34 (70%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G + RKT KAK V+SGSPWYG DRV YLGP Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGP 62
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/34 (64%), Positives = 24/34 (70%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G +VT RKT KAK +S SPWYG DRV YLGP Sbjct: 29 GNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGP 62
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/34 (73%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RVT RKT AK K SGSPWYGSDRV YLGP Sbjct: 29 GSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGP 61
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/34 (73%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RVT RKT AK K SGSPWYGSDRV YLGP Sbjct: 29 GSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGP 61
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 48.1 bits (113), Expect = 7e-06 Identities = 25/35 (71%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = +1 Query: 1 GEARVTXRK-TXAKAKQVASGSPWYGSDRVLYLGP 102 GEARVT RK T K AS SPWYG DRVLYLGP Sbjct: 35 GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGP 69
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 47.4 bits (111), Expect = 1e-05 Identities = 21/34 (61%), Positives = 23/34 (67%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G AR T RK+ K +SGSPWYG DRV YLGP Sbjct: 31 GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGP 64
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G A+ T RKT +K+ V+SGSPWYG DRV YLGP Sbjct: 19 GNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGP 50
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/34 (61%), Positives = 23/34 (67%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G AR T RK+ K +SGSPWYG DRV YLGP Sbjct: 30 GGARFTMRKSATTKKVASSGSPWYGPDRVKYLGP 63
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 46.6 bits (109), Expect = 2e-05 Identities = 23/35 (65%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVAS-GSPWYGSDRVLYLGP 102 GEAR+T RK K AS SPWYG DRVLYLGP Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGP 73
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/34 (67%), Positives = 24/34 (70%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RV+ RKT AK VAS SPWYG DRV YLGP Sbjct: 29 GNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGP 60
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/34 (64%), Positives = 25/34 (73%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RV+ RKT +K V+SGSPWYG DRV YLGP Sbjct: 9 GVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGP 40
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/31 (70%), Positives = 24/31 (77%) Frame = +1 Query: 10 RVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 RV+ RKT K QV+SGSPWYG DRV YLGP Sbjct: 30 RVSMRKTVTK--QVSSGSPWYGPDRVKYLGP 58
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 45.1 bits (105), Expect = 6e-05 Identities = 22/34 (64%), Positives = 24/34 (70%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RV+ RKT K V+SGSPWYG DRV YLGP Sbjct: 28 GVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGP 59
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVAS-GSPWYGSDRVLYLGP 102 GEAR+T RK + AS SPWYG DRV+YLGP Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGP 73
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/34 (64%), Positives = 24/34 (70%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G+ARV+ RKT A K GSPWYG DRV YLGP Sbjct: 29 GDARVSMRKTAATKKV---GSPWYGPDRVKYLGP 59
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/34 (64%), Positives = 22/34 (64%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RVT RKT SGSPWYGSDRV YLGP Sbjct: 29 GTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGP 60
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/34 (61%), Positives = 22/34 (64%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G R+T RK A AK S SPWYG DRV YLGP Sbjct: 29 GNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGP 60
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 40.0 bits (92), Expect = 0.002 Identities = 20/34 (58%), Positives = 21/34 (61%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RV+ RKT K S SPWYG DRV YLGP Sbjct: 29 GNGRVSMRKT---VKAPVSDSPWYGPDRVKYLGP 59
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 38.9 bits (89), Expect = 0.004 Identities = 21/34 (61%), Positives = 22/34 (64%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 GEARV +KA SGS WYGSDR LYLGP Sbjct: 30 GEARVQMMAPKSKAP---SGSIWYGSDRPLYLGP 60
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 36.2 bits (82), Expect = 0.027 Identities = 18/34 (52%), Positives = 20/34 (58%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 GE R+T R+T A Q S WYG DR YLGP Sbjct: 31 GEGRITMRRTVKSAPQ----SIWYGEDRPKYLGP 60
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 35.4 bits (80), Expect = 0.045 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +1 Query: 4 EARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 EARVT R+T +K+ S + WYG+DR +LGP Sbjct: 33 EARVTMRRTVSKS--AGSDTIWYGADRPKFLGP 63
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast| precursor (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 34.7 bits (78), Expect = 0.077 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPW 69 G R+T RKT AK K +SGSPW Sbjct: 29 GNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast| precursor (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 34.7 bits (78), Expect = 0.077 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPW 69 G R+T RKT AK K +SGSPW Sbjct: 29 GNGRITMRKTAAKPKPASSGSPW 51
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 33.5 bits (75), Expect = 0.17 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G+AR T R+T A + S WYG DR YLGP Sbjct: 31 GQARFTMRRTVKSAPE----SIWYGPDRPKYLGP 60
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.29 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +1 Query: 4 EARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 +AR+T R+T A + S WYG DR YLGP Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGP 61
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.38 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G R T R+T A Q S WYG DR YLGP Sbjct: 31 GGGRATMRRTVKSAPQ----SIWYGEDRPKYLGP 60
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 32.3 bits (72), Expect = 0.38 Identities = 17/31 (54%), Positives = 18/31 (58%) Frame = +1 Query: 10 RVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 RVT R+T A Q S WYG DR YLGP Sbjct: 6 RVTMRRTVKSAPQ----SIWYGEDRPKYLGP 32
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 31.6 bits (70), Expect = 0.65 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = +1 Query: 10 RVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 R+T R+T A Q S WYG DR YLGP Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGP 58
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 1.1 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +1 Query: 10 RVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 R T R+T A Q S WYG DR YLGP Sbjct: 34 RATMRRTVKSAPQ----SIWYGEDRPKYLGP 60
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 30.4 bits (67), Expect = 1.5 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 43 KQVASGSPWYGSDRVLYLGP 102 K +S SPW+G D V YLGP Sbjct: 4 KVASSSSPWHGPDGVKYLGP 23
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 29.6 bits (65), Expect = 2.5 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +1 Query: 1 GEARVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 G RV+ R+T A S WYG DR YLGP Sbjct: 31 GGGRVSMRRTVKSAPT----SIWYGPDRPKYLGP 60
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 29.3 bits (64), Expect = 3.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +1 Query: 10 RVTXRKTXAKAKQVASGSPWYGSDRVLYLGP 102 RV+ R+T A + S WYG DR YLGP Sbjct: 33 RVSMRRTIKSAPE----SIWYGPDRPKYLGP 59
>RK22_CHLRE (Q84U21) 50S ribosomal protein L22, chloroplast precursor| Length = 175 Score = 28.9 bits (63), Expect = 4.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 5 RLASPXAKRXQRPSRLPPAARGTALTVCSTS 97 R P RP+R+ P AR TA VCS + Sbjct: 17 RSVQPFRPAAVRPARIAPVARKTATVVCSAA 47
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 28.9 bits (63), Expect = 4.2 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +1 Query: 40 AKQVASGSPWYGSDRVLYLGP 102 A+ S WYG DRV YLGP Sbjct: 38 ARFTMSNDLWYGPDRVKYLGP 58
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 27.7 bits (60), Expect = 9.4 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +1 Query: 67 WYGSDRVLYLGP 102 WYG DRV YLGP Sbjct: 50 WYGPDRVKYLGP 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.131 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,462,378 Number of Sequences: 219361 Number of extensions: 126316 Number of successful extensions: 429 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 422 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 422 length of database: 80,573,946 effective HSP length: 11 effective length of database: 78,160,975 effective search space used: 1875863400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)