ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2n08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477069.1| Oryza sativa (japonica cultivar-group), mRNA 371 2e-99
2dbj|AK120553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
4dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
5ref|NM_111408.3| Arabidopsis thaliana aminopeptidase/ metalloexo... 74 7e-10
6gb|BT001080.1| Arabidopsis thaliana At3g05350/T12H1_32 mRNA, com... 74 7e-10
7gb|AY079018.1| Arabidopsis thaliana AT3g05350/T12H1_32 mRNA, com... 74 7e-10
8gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete s... 72 3e-09
9gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete seq... 72 3e-09
10gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 68 4e-08
11dbj|AB236853.1| Trifolium pratense RNA for putative DNA-damage-r... 64 7e-07
12emb|AL133359.1|SPAPJ696 S.pombe chromosome I PCR product p696 46 0.16
13ref|NM_001018448.1| Schizosaccharomyces pombe 972h- hypothetical... 46 0.16
14emb|AJ308541.1|LES308541 Lycopersicon esculentum mRNA for Xaa-Pr... 46 0.16
15emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 ... 46 0.16
16gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.61
17gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.61
18ref|NM_128404.1| Arabidopsis thaliana unknown protein AT2G28440 ... 42 2.4
19gb|AY868979.1| Uncultured alpha proteobacterium clone I3K-0178 1... 42 2.4
20gb|AC122477.5| Mus musculus BAC clone RP24-336L24 from chromosom... 42 2.4
21gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome... 42 2.4
22emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on ch... 42 2.4
23gb|DQ056548.1| Arabidopsis thaliana proline-rich family protein ... 42 2.4
24gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 42 2.4
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
26gb|AY190944.1| Drosophila pseudoobscura clone DPSF01_8_E17 (D142... 42 2.4
27dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
28dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
29dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.4
30gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 42 2.4
31gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 42 2.4
32gb|AC005065.1| Homo sapiens BAC clone CTB-114B19 from 7, complet... 40 9.6
33emb|CR376724.12| Zebrafish DNA sequence from clone DKEY-174A16 i... 40 9.6
34gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p... 40 9.6
35gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complet... 40 9.6
36emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in ... 40 9.6
37emb|AL645820.1| Human DNA sequence from clone RP1-138O17 on chro... 40 9.6
38emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chr... 40 9.6
39emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chr... 40 9.6
40gb|DQ088854.1| Uncultured bacterium eBACmed18B02 probable aminop... 40 9.6
41emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in l... 40 9.6
42gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, co... 40 9.6
43gb|AC112713.3| Homo sapiens BAC clone RP11-175H11 from 4, comple... 40 9.6
44gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, com... 40 9.6
45gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete seq... 40 9.6
46gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence 40 9.6
47ref|XM_936260.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.6
48ref|XM_926850.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.6
49gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84... 40 9.6
50gb|AF001905.1|AF001905 Homo sapiens cosmids E079, B0920 and A8 f... 40 9.6
51gb|AC158511.2| Mus musculus BAC clone RP24-242G2 from chromosome... 40 9.6
52gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT... 40 9.6
53dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
54gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Canc... 40 9.6
55gb|AY190938.1| Drosophila erecta clone DERF01_37_F17 (D1421) gen... 40 9.6
56gb|AC023743.4| Drosophila melanogaster X BAC RP98-40O10 (Roswell... 40 9.6
57gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, comple... 40 9.6
58dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
59emb|CR391988.6| Zebrafish DNA sequence from clone CH211-107O23 i... 40 9.6
60emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 ... 40 9.6
61gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11... 40 9.6
62gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 ... 40 9.6
63gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.21... 40 9.6
64emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on ch... 40 9.6
65emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chro... 40 9.6
66gb|AC124737.5| Mus musculus BAC clone RP23-330K22 from 13, compl... 40 9.6
67emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on ch... 40 9.6
68gb|AC001656.1|DMAC001656 Drosophila melanogaster (P1 DS00397 (D1... 40 9.6
69dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 9.6
70emb|Z72519.1|HSJ13817A Human DNA sequence from cosmid J138O17, b... 40 9.6
71emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chro... 40 9.6 
>ref|XM_477069.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  371 bits (187), Expect = 2e-99
 Identities = 316/358 (88%), Gaps = 1/358 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   atggagttggagctgcacttaatgtcc-tgagggcccgcagngcataagctatcgatatg 71
            ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 1775 atggagttggagctgcactaaatgtccatgagggccctcagagcataagctatcgatatg 1834

                                                                        
Query: 72   gaaacttgacagctttacagaagggcatgattgtaagcaatgaacctggttattatgaag 131
            |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 1835 gaaatttgacagctttacagaagggcatgatcgtaagcaatgagcctggttattacgaag 1894

                                                                        
Query: 132  acaattcatttggcattcgtatcgagaatctgcttctggtgaaggaggttaatttagcca 191
            ||||||| |||||||||||||| |||||||| |||||||| || |||||||||||  | |
Sbjct: 1895 acaattcctttggcattcgtatagagaatcttcttctggtcaaagaggttaatttgccaa 1954

                                                                        
Query: 192  attcttttggcggcatctcatacctgggctttgagaaactaacttttgttccgattcaga 251
            |||| ||||| ||| |||| ||||| || ||||| ||| ||||||||||||| |||||||
Sbjct: 1955 attcgtttggtggcgtctcgtaccttggttttgaaaaattaacttttgttccaattcaga 2014

                                                                        
Query: 252  gaaagcttattgacttacccttgctatcacctttggagataaattgggtcaatgagtacc 311
            | |||||| |||| ||  |||| |||||||||| |||||| |||||| ||||||| ||||
Sbjct: 2015 gcaagcttgttgatttgtccttactatcaccttcggagatcaattggatcaatgaatacc 2074

                                                                      
Query: 312  atgaagaagtttgggaaaaggtttcccctttcttgagtggcaatcctcgcaactggct 369
            |||| ||||| |||||||||||||||||||| ||||||||| || ||| | |||||||
Sbjct: 2075 atgacgaagtctgggaaaaggtttcccctttgttgagtggccattctctcgactggct 2132
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>dbj|AK120553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130G17, full
            insert sequence
          Length = 2691

 Score =  371 bits (187), Expect = 2e-99
 Identities = 316/358 (88%), Gaps = 1/358 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   atggagttggagctgcacttaatgtcc-tgagggcccgcagngcataagctatcgatatg 71
            ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 1842 atggagttggagctgcactaaatgtccatgagggccctcagagcataagctatcgatatg 1901

                                                                        
Query: 72   gaaacttgacagctttacagaagggcatgattgtaagcaatgaacctggttattatgaag 131
            |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 1902 gaaatttgacagctttacagaagggcatgatcgtaagcaatgagcctggttattacgaag 1961

                                                                        
Query: 132  acaattcatttggcattcgtatcgagaatctgcttctggtgaaggaggttaatttagcca 191
            ||||||| |||||||||||||| |||||||| |||||||| || |||||||||||  | |
Sbjct: 1962 acaattcctttggcattcgtatagagaatcttcttctggtcaaagaggttaatttgccaa 2021

                                                                        
Query: 192  attcttttggcggcatctcatacctgggctttgagaaactaacttttgttccgattcaga 251
            |||| ||||| ||| |||| ||||| || ||||| ||| ||||||||||||| |||||||
Sbjct: 2022 attcgtttggtggcgtctcgtaccttggttttgaaaaattaacttttgttccaattcaga 2081

                                                                        
Query: 252  gaaagcttattgacttacccttgctatcacctttggagataaattgggtcaatgagtacc 311
            | |||||| |||| ||  |||| |||||||||| |||||| |||||| ||||||| ||||
Sbjct: 2082 gcaagcttgttgatttgtccttactatcaccttcggagatcaattggatcaatgaatacc 2141

                                                                      
Query: 312  atgaagaagtttgggaaaaggtttcccctttcttgagtggcaatcctcgcaactggct 369
            |||| ||||| |||||||||||||||||||| ||||||||| || ||| | |||||||
Sbjct: 2142 atgacgaagtctgggaaaaggtttcccctttgttgagtggccattctctcgactggct 2199
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  204 bits (103), Expect = 3e-49
 Identities = 133/142 (93%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                           
Query: 13      atggagttggagctgcacttaatgtcc-tgagggcccgcagngcataagctatcgatatg 71
               ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 5725920 atggagttggagctgcactaaatgtccatgagggccctcagagcataagctatcgatatg 5725861

                                                                           
Query: 72      gaaacttgacagctttacagaagggcatgattgtaagcaatgaacctggttattatgaag 131
               |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 5725860 gaaatttgacagctttacagaagggcatgatcgtaagcaatgagcctggttattacgaag 5725801

                                     
Query: 132     acaattcatttggcattcgtat 153
               ||||||| ||||||||||||||
Sbjct: 5725800 acaattcctttggcattcgtat 5725779



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                           
Query: 246     ttcagagaaagcttattgacttacccttgctatcacctttggagataaattgggtcaatg 305
               ||||||| |||||| |||| ||  |||| |||||||||| |||||| |||||| ||||||
Sbjct: 5725314 ttcagagcaagcttgttgatttgtccttactatcaccttcggagatcaattggatcaatg 5725255

                                           
Query: 306     agtaccatgaagaagtttgggaaaaggt 333
               | |||||||| ||||| |||||||||||
Sbjct: 5725254 aataccatgacgaagtctgggaaaaggt 5725227



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                           
Query: 156     agaatctgcttctggtgaaggaggttaatttagccaattcttttggcggcatctcatacc 215
               ||||||| |||||||| || |||||||||||  | ||||| ||||| ||| |||| ||||
Sbjct: 5725658 agaatcttcttctggtcaaagaggttaatttgccaaattcgtttggtggcgtctcgtacc 5725599

                                                  
Query: 216     tgggctttgagaaactaacttttgttccgattcag 250
               | || ||||| ||| ||||||||||||| ||||||
Sbjct: 5725598 ttggttttgaaaaattaacttttgttccaattcag 5725564



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 330     aggtttcccctttcttgagtggcaatcctcgcaactggct 369
               ||||||||||||| ||||||||| || ||| | |||||||
Sbjct: 5724650 aggtttcccctttgttgagtggccattctctcgactggct 5724611
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>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_B04
          Length = 151721

 Score =  204 bits (103), Expect = 3e-49
 Identities = 133/142 (93%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                         
Query: 13    atggagttggagctgcacttaatgtcc-tgagggcccgcagngcataagctatcgatatg 71
             ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 32948 atggagttggagctgcactaaatgtccatgagggccctcagagcataagctatcgatatg 32889

                                                                         
Query: 72    gaaacttgacagctttacagaagggcatgattgtaagcaatgaacctggttattatgaag 131
             |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 32888 gaaatttgacagctttacagaagggcatgatcgtaagcaatgagcctggttattacgaag 32829

                                   
Query: 132   acaattcatttggcattcgtat 153
             ||||||| ||||||||||||||
Sbjct: 32828 acaattcctttggcattcgtat 32807



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                         
Query: 246   ttcagagaaagcttattgacttacccttgctatcacctttggagataaattgggtcaatg 305
             ||||||| |||||| |||| ||  |||| |||||||||| |||||| |||||| ||||||
Sbjct: 32342 ttcagagcaagcttgttgatttgtccttactatcaccttcggagatcaattggatcaatg 32283

                                         
Query: 306   agtaccatgaagaagtttgggaaaaggt 333
             | |||||||| ||||| |||||||||||
Sbjct: 32282 aataccatgacgaagtctgggaaaaggt 32255



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                         
Query: 156   agaatctgcttctggtgaaggaggttaatttagccaattcttttggcggcatctcatacc 215
             ||||||| |||||||| || |||||||||||  | ||||| ||||| ||| |||| ||||
Sbjct: 32686 agaatcttcttctggtcaaagaggttaatttgccaaattcgtttggtggcgtctcgtacc 32627

                                                
Query: 216   tgggctttgagaaactaacttttgttccgattcag 250
             | || ||||| ||| ||||||||||||| ||||||
Sbjct: 32626 ttggttttgaaaaattaacttttgttccaattcag 32592



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 330   aggtttcccctttcttgagtggcaatcctcgcaactggct 369
             ||||||||||||| ||||||||| || ||| | |||||||
Sbjct: 31678 aggtttcccctttgttgagtggccattctctcgactggct 31639
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>ref|NM_111408.3| Arabidopsis thaliana aminopeptidase/ metalloexopeptidase AT3G05350
            mRNA, complete cds
          Length = 1947

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                        
Query: 95   ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttggcattcgtatc 154
            |||||||| ||||||||||||||||| |||||||||||| || ||||||| || || || 
Sbjct: 1496 ggcatgatagtaagcaatgaacctggatattatgaagaccatgcatttgggatccgaatt 1555

                         
Query: 155  gagaatctgcttc 167
            |||||||| ||||
Sbjct: 1556 gagaatctccttc 1568
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>gb|BT001080.1| Arabidopsis thaliana At3g05350/T12H1_32 mRNA, complete cds
          Length = 2133

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                        
Query: 95   ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttggcattcgtatc 154
            |||||||| ||||||||||||||||| |||||||||||| || ||||||| || || || 
Sbjct: 1822 ggcatgatagtaagcaatgaacctggatattatgaagaccatgcatttgggatccgaatt 1881

                         
Query: 155  gagaatctgcttc 167
            |||||||| ||||
Sbjct: 1882 gagaatctccttc 1894
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>gb|AY079018.1| Arabidopsis thaliana AT3g05350/T12H1_32 mRNA, complete cds
          Length = 2298

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                        
Query: 95   ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttggcattcgtatc 154
            |||||||| ||||||||||||||||| |||||||||||| || ||||||| || || || 
Sbjct: 1846 ggcatgatagtaagcaatgaacctggatattatgaagaccatgcatttgggatccgaatt 1905

                         
Query: 155  gagaatctgcttc 167
            |||||||| ||||
Sbjct: 1906 gagaatctccttc 1918
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>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence
          Length = 140639

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 95   ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttggcattcg 150
            |||||||||||||||||||||||||| |||||||||||| || | || ||||||||
Sbjct: 6521 ggcatgattgtaagcaatgaacctggctattatgaagaccatgctttcggcattcg 6466
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>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence
          Length = 120194

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 95    ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttggcattcg 150
             |||||||||||||||||||||||||| |||||||||||| || | || ||||||||
Sbjct: 95780 ggcatgattgtaagcaatgaacctggctattatgaagaccatgctttcggcattcg 95725
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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete
              sequence
          Length = 140064

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                
Query: 95     ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttgg 144
              |||||||| ||||||||||||||||| |||||||||||| || |||||||
Sbjct: 123834 ggcatgatagtaagcaatgaacctggatattatgaagaccatgcatttgg 123785
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>dbj|AB236853.1| Trifolium pratense RNA for putative DNA-damage-repair/toleration
            protein DRT102, complete cds, clone: C669
          Length = 3563

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 95   ggcatgattgtaagcaatgaacctggttattatgaagacaattcatttggcattcg 150
            ||||||||||| |||||||| |||||||||||||||||| || | || ||||||||
Sbjct: 2079 ggcatgattgttagcaatgagcctggttattatgaagaccatgccttcggcattcg 2134
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>emb|AL133359.1|SPAPJ696 S.pombe chromosome I PCR product p696
          Length = 5404

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 106  aagcaatgaacctggttattatgaaga 132
            ||||||||||||||||| |||||||||
Sbjct: 4964 aagcaatgaacctggtttttatgaaga 4938
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>ref|NM_001018448.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC22G7.01c),
            partial mRNA
          Length = 1797

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 106  aagcaatgaacctggttattatgaaga 132
            ||||||||||||||||| |||||||||
Sbjct: 1509 aagcaatgaacctggtttttatgaaga 1535
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>emb|AJ308541.1|LES308541 Lycopersicon esculentum mRNA for Xaa-Pro aminopeptidase 1 (app1 gene)
          Length = 2198

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 111  atgaacctggttattatgaagac 133
            |||||||||||||||||||||||
Sbjct: 1745 atgaacctggttattatgaagac 1767
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>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3,
            complete sequence
          Length = 159132

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 421  aaagcaacaaaaaagagcaattc 443
            |||||||||||||||||||||||
Sbjct: 3322 aaagcaacaaaaaagagcaattc 3344
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 152     atcgagaatctgcttctggtga 173
               ||||||||||||||||||||||
Sbjct: 1959513 atcgagaatctgcttctggtga 1959534
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 480     acgatggcaaggccgaaggcat 501
               ||||||||||||||||||||||
Sbjct: 2355240 acgatggcaaggccgaaggcat 2355219
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>ref|NM_128404.1| Arabidopsis thaliana unknown protein AT2G28440 mRNA, complete cds
          Length = 807

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 155 gagaatctgcttctggtgaag 175
           |||||||||||||||||||||
Sbjct: 346 gagaatctgcttctggtgaag 326
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>gb|AY868979.1| Uncultured alpha proteobacterium clone I3K-0178 16S ribosomal RNA
           gene, partial sequence
          Length = 452

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 578 catcttcatttgccatcggtt 598
           |||||||||||||||||||||
Sbjct: 25  catcttcatttgccatcggtt 45
to top
>gb|AC122477.5| Mus musculus BAC clone RP24-336L24 from chromosome 14, complete
             sequence
          Length = 158605

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   tgagaaactaacttttgttcc 243
             |||||||||||||||||||||
Sbjct: 32686 tgagaaactaacttttgttcc 32666
to top
>gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome 14, complete sequence
          Length = 215551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 223   tgagaaactaacttttgttcc 243
             |||||||||||||||||||||
Sbjct: 82910 tgagaaactaacttttgttcc 82930
to top
>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the
             3' end of the Col23a1 gene for procollagen (type XXIII,
             alpha 1), the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 155917

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   acaaaaagcaacaaaaaagag 437
             |||||||||||||||||||||
Sbjct: 92429 acaaaaagcaacaaaaaagag 92409
to top
>gb|DQ056548.1| Arabidopsis thaliana proline-rich family protein (At2g28440) mRNA,
           complete cds
          Length = 807

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 155 gagaatctgcttctggtgaag 175
           |||||||||||||||||||||
Sbjct: 346 gagaatctgcttctggtgaag 326
to top
>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
            sequence
          Length = 93122

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 155  gagaatctgcttctggtgaag 175
            |||||||||||||||||||||
Sbjct: 8936 gagaatctgcttctggtgaag 8956
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 308      taccatgaagaagtttgggaa 328
                |||||||||||||||||||||
Sbjct: 16342291 taccatgaagaagtttgggaa 16342271
to top
>gb|AY190944.1| Drosophila pseudoobscura clone DPSF01_8_E17 (D1422) genomic sequence
          Length = 42627

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 18   gttggagctgcacttaatgtcctga 42
            ||||| |||||||||||||||||||
Sbjct: 1319 gttggcgctgcacttaatgtcctga 1343
to top
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0046G12
          Length = 189391

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   taccatgaagaagtttgggaa 328
             |||||||||||||||||||||
Sbjct: 30838 taccatgaagaagtttgggaa 30818
to top
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1344_B01
          Length = 170912

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    taccatgaagaagtttgggaa 328
              |||||||||||||||||||||
Sbjct: 158807 taccatgaagaagtttgggaa 158787
to top
>dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-725K16, complete
             sequence
          Length = 195874

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   taccatgaagaagtttgggaa 328
             |||||||||||||||||||||
Sbjct: 60049 taccatgaagaagtttgggaa 60029
to top
>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 443    cagcaagtattcacttcttgg 463
              |||||||||||||||||||||
Sbjct: 133880 cagcaagtattcacttcttgg 133860
to top
>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 443  cagcaagtattcacttcttgg 463
            |||||||||||||||||||||
Sbjct: 2079 cagcaagtattcacttcttgg 2059
to top
>gb|AC005065.1| Homo sapiens BAC clone CTB-114B19 from 7, complete sequence
          Length = 83928

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 417   acaaaaagcaacaaaaaagagcaa 440
             |||||||||||||||||| |||||
Sbjct: 16371 acaaaaagcaacaaaaaaaagcaa 16348
to top
>emb|CR376724.12| Zebrafish DNA sequence from clone DKEY-174A16 in linkage group 3,
              complete sequence
          Length = 168199

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    attatgaagacaattcattt 142
              ||||||||||||||||||||
Sbjct: 123325 attatgaagacaattcattt 123344
to top
>gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p, complete sequence
          Length = 162042

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   ttattatgaagacaattcatttgg 144
             ||||||| ||||||||||||||||
Sbjct: 90820 ttattatcaagacaattcatttgg 90797
to top
>gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complete sequence
          Length = 195968

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 419   aaaaagcaacaaaaaagagcaatt 442
             ||||| ||||||||||||||||||
Sbjct: 27380 aaaaaacaacaaaaaagagcaatt 27357
to top
>emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in linkage group 8, complete
              sequence
          Length = 217514

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    attatgaagacaattcattt 142
              ||||||||||||||||||||
Sbjct: 142522 attatgaagacaattcattt 142503
to top
>emb|AL645820.1| Human DNA sequence from clone RP1-138O17 on chromosome X, complete
            sequence
          Length = 125787

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  gaatctgcttctggtgaagg 176
            ||||||||||||||||||||
Sbjct: 6627 gaatctgcttctggtgaagg 6608
to top
>emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chromosome X Contains a
             karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
             (KPNA2) pseudogene and a chaperonin containing TCP1,
             subunit 4 (delta) (CCT4) pseudogene, complete sequence
          Length = 157946

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   acaaaaagcaacaaaaaaga 436
             ||||||||||||||||||||
Sbjct: 18568 acaaaaagcaacaaaaaaga 18549
to top
>emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chromosome 6 Contains the
             3' end of the RIOK1 gene for RIO kinase 1 (yeast), a
             hetergeneous riboprotein L (HNRNP L) pseudogene, a
             ribosomal protein S26 pseudogene and a isocitrate
             dehydrogenase 1 (IDH1) pseudogene, complete sequence
          Length = 128320

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gaatctgcttctggtgaagg 176
             ||||||||||||||||||||
Sbjct: 91432 gaatctgcttctggtgaagg 91413
to top
>gb|DQ088854.1| Uncultured bacterium eBACmed18B02 probable aminopeptidase and
           predicted DNA helicase II genes, complete cds
          Length = 3894

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 95  ggcatgattgtaagcaatgaacctggtt 122
           ||||||||| |||| |||||||||||||
Sbjct: 919 ggcatgattttaagtaatgaacctggtt 892
to top
>emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in linkage group 20, complete
              sequence
          Length = 207204

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    aagtttgggaaaaggtttcc 337
              ||||||||||||||||||||
Sbjct: 197234 aagtttgggaaaaggtttcc 197253
to top
>gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, complete sequence
          Length = 165879

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gaatctgcttctggtgaagg 176
             ||||||||||||||||||||
Sbjct: 48064 gaatctgcttctggtgaagg 48045
to top
>gb|AC112713.3| Homo sapiens BAC clone RP11-175H11 from 4, complete sequence
          Length = 114398

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 614   catggatagttctgtttggtcttt 637
             ||||||||| ||||||||||||||
Sbjct: 42425 catggatagctctgtttggtcttt 42448
to top
>gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, complete sequence
          Length = 174508

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gaatctgcttctggtgaagg 176
              ||||||||||||||||||||
Sbjct: 166302 gaatctgcttctggtgaagg 166283
to top
>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence
          Length = 132056

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gaatctgcttctggtgaagg 176
             ||||||||||||||||||||
Sbjct: 39624 gaatctgcttctggtgaagg 39643
to top
>gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence
          Length = 83679

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gaatctgcttctggtgaagg 176
             ||||||||||||||||||||
Sbjct: 19841 gaatctgcttctggtgaagg 19860
to top
>ref|XM_936260.1| PREDICTED: Homo sapiens hypothetical protein LOC642117 (LOC642117),
           mRNA
          Length = 213

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gaatctgcttctggtgaagg 176
           ||||||||||||||||||||
Sbjct: 186 gaatctgcttctggtgaagg 205
to top
>ref|XM_926850.1| PREDICTED: Homo sapiens hypothetical protein LOC643545 (LOC643545),
           mRNA
          Length = 213

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gaatctgcttctggtgaagg 176
           ||||||||||||||||||||
Sbjct: 186 gaatctgcttctggtgaagg 205
to top
>gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84A-84B, BAC clone
             BACR32J03, complete sequence
          Length = 190642

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    gttggagctgcacttaatgtcctg 41
             ||||| ||||||||||||||||||
Sbjct: 72203 gttggcgctgcacttaatgtcctg 72180
to top
>gb|AF001905.1|AF001905 Homo sapiens cosmids E079, B0920 and A8 from Xq25 X-linked
              lymphoproliferative disease gene candidate region, complete
              sequence
          Length = 197620

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gaatctgcttctggtgaagg 176
              ||||||||||||||||||||
Sbjct: 119161 gaatctgcttctggtgaagg 119180
to top
>gb|AC158511.2| Mus musculus BAC clone RP24-242G2 from chromosome 13, complete sequence
          Length = 143388

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    acaaaaagcaacaaaaaaga 436
              ||||||||||||||||||||
Sbjct: 106220 acaaaaagcaacaaaaaaga 106201
to top
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence
          Length = 429825

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     gttggagctgcacttaatgtcctg 41
              ||||| ||||||||||||||||||
Sbjct: 151589 gttggcgctgcacttaatgtcctg 151612
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 410      caacatgacaaaaagcaacaaaaa 433
                ||||||||||||||||| ||||||
Sbjct: 21248887 caacatgacaaaaagcagcaaaaa 21248864
to top
>gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113027

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   agaatctgcttctggtgaag 175
             ||||||||||||||||||||
Sbjct: 12398 agaatctgcttctggtgaag 12379
to top
>gb|AY190938.1| Drosophila erecta clone DERF01_37_F17 (D1421) genomic sequence
          Length = 44340

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 18   gttggagctgcacttaatgtcctg 41
            ||||| ||||||||||||||||||
Sbjct: 1410 gttggcgctgcacttaatgtcctg 1433
to top
>gb|AC023743.4| Drosophila melanogaster X BAC RP98-40O10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185405

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     gctatcgatatggaaacttgacag 83
              ||||||||||| ||||||||||||
Sbjct: 108003 gctatcgatattgaaacttgacag 107980
to top
>gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, complete sequence
          Length = 185774

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   agaatctgcttctggtgaag 175
             ||||||||||||||||||||
Sbjct: 84198 agaatctgcttctggtgaag 84179
to top
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0656E03
          Length = 181786

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   caacatgacaaaaagcaacaaaaa 433
             ||||||||||||||||| ||||||
Sbjct: 44263 caacatgacaaaaagcagcaaaaa 44240
to top
>emb|CR391988.6| Zebrafish DNA sequence from clone CH211-107O23 in linkage group 18,
            complete sequence
          Length = 60360

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  gctttgagaaactaactttt 238
            ||||||||||||||||||||
Sbjct: 2507 gctttgagaaactaactttt 2526
to top
>emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 in linkage group 1,
              complete sequence
          Length = 204799

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    tgacaaaaagcaacaaaaaa 434
              ||||||||||||||||||||
Sbjct: 129063 tgacaaaaagcaacaaaaaa 129082
to top
>gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11 of 118 of the complete
              sequence
          Length = 308146

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     gttggagctgcacttaatgtcctg 41
              ||||| ||||||||||||||||||
Sbjct: 127063 gttggcgctgcacttaatgtcctg 127040
to top
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete
              sequence
          Length = 299633

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     gctatcgatatggaaacttgacag 83
              ||||||||||| ||||||||||||
Sbjct: 225048 gctatcgatattgaaacttgacag 225025
to top
>gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.215_E_13, complete sequence
          Length = 147416

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    atttgcatacatcttcattt 588
              ||||||||||||||||||||
Sbjct: 138363 atttgcatacatcttcattt 138344
to top
>emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on chromosome 13, complete
             sequence
          Length = 117646

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   ggttgaagctggtttatttt 522
             ||||||||||||||||||||
Sbjct: 24571 ggttgaagctggtttatttt 24552
to top
>emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chromosome 13, complete
              sequence
          Length = 192064

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    acaaaaagcaacaaaaaaga 436
              ||||||||||||||||||||
Sbjct: 164897 acaaaaagcaacaaaaaaga 164878
to top
>gb|AC124737.5| Mus musculus BAC clone RP23-330K22 from 13, complete sequence
          Length = 188023

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 417    acaaaaagcaacaaaaaaga 436
              ||||||||||||||||||||
Sbjct: 163308 acaaaaagcaacaaaaaaga 163327
to top
>emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on chromosome 17, complete
             sequence
          Length = 216634

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 419   aaaaagcaacaaaaaagagcaatt 442
             ||||| ||||||||||||||||||
Sbjct: 64465 aaaaaacaacaaaaaagagcaatt 64488
to top
>gb|AC001656.1|DMAC001656 Drosophila melanogaster (P1 DS00397 (D18)) DNA sequence, complete
           sequence
          Length = 3773

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttggagctgcacttaatgtcctg 41
           ||||| ||||||||||||||||||
Sbjct: 886 gttggcgctgcacttaatgtcctg 863
to top
>dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031,
             complete sequence
          Length = 97191

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   acaaaaagcaacaaaaaagagcaa 440
             ||||||||||||||| ||||||||
Sbjct: 21197 acaaaaagcaacaaagaagagcaa 21220
to top
>emb|Z72519.1|HSJ13817A Human DNA sequence from cosmid J138O17, between markers DXS6791 and
              DXS8038 on chromosome X contains EST CA repeat and an
              endogenous retroviral like element
          Length = 125787

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gaatctgcttctggtgaagg 176
              ||||||||||||||||||||
Sbjct: 119161 gaatctgcttctggtgaagg 119180
to top
>emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chromosome 6 Contains a
             pseudogene similar to hetergeneous riboprotein L (HNRNP
             L), to Ribosomal protein S26, a pseudogene similar to
             isocitrate dehydrogenase (NADP+), STSs and GSSs, complete
             sequence
          Length = 52747

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gaatctgcttctggtgaagg 176
             ||||||||||||||||||||
Sbjct: 15847 gaatctgcttctggtgaagg 15828


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,414,437
Number of Sequences: 3902068
Number of extensions: 6414437
Number of successful extensions: 125652
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125370
Number of HSP's gapped (non-prelim): 278
length of query: 701
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 678
effective length of database: 17,143,297,704
effective search space: 11623155843312
effective search space used: 11623155843312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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