ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2o05 |
|---|---|
| Clone Library Name | barley_pub |
>FTSY_AQUAE (O67066) Cell division protein ftsY homolog| Length = 461 Score = 212 bits (540), Expect = 6e-55 Identities = 105/189 (55%), Positives = 143/189 (75%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLAH+ K +G KVL+ AGDTFRAAA +QLE+WA+R G +IV ++ + +V Sbjct: 272 GKTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIV-KKEEGSDPGAV 330 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + + +K+ K EG+++VL DT+GRLHT L+ EL KKVI K P+E LLV+D TT Sbjct: 331 VYEGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATT 390 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N +QQAK F + V ITG ++TKLDG+A+GG VV++ EL IP+K VGVGEG++DLQPF Sbjct: 391 GQNAIQQAKVFKEAVDITGIVVTKLDGSAKGGAVVAICRELKIPIKLVGVGEGIDDLQPF 450 Query: 553 DAEAFVEAI 579 DA+A+VEA+ Sbjct: 451 DADAYVEAL 459
>FTSY_NEIMC (O30391) Cell division protein ftsY homolog| Length = 421 Score = 199 bits (506), Expect = 5e-51 Identities = 96/189 (50%), Positives = 136/189 (71%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS+GKLA F+ +G VL+AAGDTFRAAAR+QL+ W ER + + + + + +V Sbjct: 233 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGER--NNVTVISQTTGDSAAV 290 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV+ K G DIVL DT+GRL T LMEE+ K+V+ KA+P AP+EI++VLD Sbjct: 291 CFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANI 350 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + Q K F+D +G+TG I+TKLDGTA+GG + ++ + +PV+++GVGEG++DL+PF Sbjct: 351 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 410 Query: 553 DAEAFVEAI 579 DA AFV+A+ Sbjct: 411 DARAFVDAL 419
>FTSY_NEIMB (P57011) Cell division protein ftsY homolog| Length = 421 Score = 199 bits (506), Expect = 5e-51 Identities = 96/189 (50%), Positives = 136/189 (71%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS+GKLA F+ +G VL+AAGDTFRAAAR+QL+ W ER + + + + + +V Sbjct: 233 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGER--NNVTVISQTTGDSAAV 290 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV+ K G DIVL DT+GRL T LMEE+ K+V+ KA+P AP+EI++VLD Sbjct: 291 CFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANI 350 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + Q K F+D +G+TG I+TKLDGTA+GG + ++ + +PV+++GVGEG++DL+PF Sbjct: 351 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 410 Query: 553 DAEAFVEAI 579 DA AFV+A+ Sbjct: 411 DARAFVDAL 419
>FTSY_NEIMA (P57010) Cell division protein ftsY homolog| Length = 421 Score = 199 bits (506), Expect = 5e-51 Identities = 96/189 (50%), Positives = 136/189 (71%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS+GKLA F+ +G VL+AAGDTFRAAAR+QL+ W ER + + + + + +V Sbjct: 233 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGER--NNVTVISQTTGDSAAV 290 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV+ K G DIVL DT+GRL T LMEE+ K+V+ KA+P AP+EI++VLD Sbjct: 291 CFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANI 350 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + Q K F+D +G+TG I+TKLDGTA+GG + ++ + +PV+++GVGEG++DL+PF Sbjct: 351 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 410 Query: 553 DAEAFVEAI 579 DA AFV+A+ Sbjct: 411 DARAFVDAL 419
>FTSY_BACSU (P51835) Cell division protein ftsY homolog| Length = 329 Score = 198 bits (503), Expect = 1e-50 Identities = 99/190 (52%), Positives = 132/190 (69%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLAH+ K EG V++AAGDTFRA A +QLE+W ERTG VI + +V Sbjct: 132 GKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVP-VIKQTAGSDPAAV 190 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + AV K D+++CDT+GRL LM+EL K+VI + +P AP+E+LL LD TT Sbjct: 191 IYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHEVLLALDATT 250 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + QAKEF+ +TG LTKLDGTA+GG V+++ +EL IPVK VG+GE V+DLQ F Sbjct: 251 GQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEF 310 Query: 553 DAEAFVEAIF 582 D E++V +F Sbjct: 311 DPESYVYGLF 320
>FTSY_THEAQ (P83749) Cell division protein ftsY| Length = 303 Score = 192 bits (489), Expect = 5e-49 Identities = 99/189 (52%), Positives = 130/189 (68%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KL ++N G KV+ AGDTFRAA QL W +R S VI + ++ Sbjct: 113 GKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRL-SIPVIQGPEGTDPAAL 171 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV+ K G+D++ DT+GRLHT + LMEEL K+ IAKA P P E+ LVLD T Sbjct: 172 AYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVT 231 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N L+QAK+F++ VG+TG I+TKLDGTA+GG ++ +V L +P+KFVGVGEG +DLQPF Sbjct: 232 GQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPF 291 Query: 553 DAEAFVEAI 579 D EAFVEA+ Sbjct: 292 DPEAFVEAL 300
>FTSY_NEIGO (P14929) Cell division protein ftsY homolog| Length = 416 Score = 190 bits (483), Expect = 2e-48 Identities = 94/189 (49%), Positives = 134/189 (70%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS+GKLA F+ +G VL+AAGDTFRAAAR+QL+ W R + + + + + +V Sbjct: 229 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGR--NNVTVISQTTGDSAAV 286 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV+ K DIVL DT+GRL T LMEE+ K+V+ KA+PGAP+EI++VLD Sbjct: 287 CFDAVQAAKAR-IDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLDANI 345 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + Q K F+D +G+TG I+TKLDGTA+GG + ++ + +PV+++GVGEG++DL+PF Sbjct: 346 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 405 Query: 553 DAEAFVEAI 579 DA AFV+ + Sbjct: 406 DARAFVDRL 414
>FTSY_ECOLI (P10121) Cell division protein ftsY| Length = 497 Score = 189 bits (481), Expect = 4e-48 Identities = 89/190 (46%), Positives = 134/190 (70%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLA +F+ +G V++AAGDTFRAAA +QL++W +R ++ + A + SV Sbjct: 305 GKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTG-ADSASV 363 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + A++ K D+++ DT+GRL LMEEL +V+ K AP+E++L +D +T Sbjct: 364 IFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAST 423 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + QAK F++ VG+TG LTKLDGTA+GG + SV D+ GIP++++GVGE +EDL+PF Sbjct: 424 GQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPF 483 Query: 553 DAEAFVEAIF 582 A+ F+EA+F Sbjct: 484 KADDFIEALF 493
>FTSY_MYCHO (O32861) Cell division protein ftsY homolog| Length = 351 Score = 187 bits (475), Expect = 2e-47 Identities = 90/186 (48%), Positives = 134/186 (72%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS+ K+A + +EG KVL+AAGDTFRAAA +QLEIWA+R G++IV N+ + +V Sbjct: 157 GKTTSISKIAKKLIDEGKKVLIAAGDTFRAAAVEQLEIWAKRVGADIVTPNENEVDPAAV 216 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + +A+ K + +DI++ DT+GRL LM EL +V+A +P AP+E LLVLD TT Sbjct: 217 VYRAIDIAKSKKYDILIVDTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATT 276 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + QA+ F + +TG ILTK+DGT++GG V+++ DE+G+ VK++G+GE V+DL F Sbjct: 277 GQNGVIQARVFKESTPLTGIILTKMDGTSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEF 336 Query: 553 DAEAFV 570 D ++++ Sbjct: 337 DLDSYI 342
>FTSY_HAEIN (P44870) Cell division protein ftsY homolog| Length = 414 Score = 181 bits (460), Expect = 1e-45 Identities = 89/190 (46%), Positives = 130/190 (68%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLA +F+ EG V++AAGDTFRAAA +QL++W ER +V + A SV Sbjct: 221 GKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQLQVWGERNHIPVVAQSTGSDSA-SV 279 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + A++ DI++ DT+GRL LM+EL +V+ K AP+EI+L LD T Sbjct: 280 IFDAMQSAAARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGT 339 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N + QAK FN+ VG+TG LTKLDGTA+GG + ++ D+ +P++++GVGE +EDL+ F Sbjct: 340 GQNAISQAKLFNEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGVGEKIEDLREF 399 Query: 553 DAEAFVEAIF 582 +A+ F+EA+F Sbjct: 400 NAKEFIEALF 409
>FTSY_MYCTU (P66842) Cell division protein ftsY homolog| Length = 422 Score = 181 bits (460), Expect = 1e-45 Identities = 98/189 (51%), Positives = 129/189 (68%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLA +G +V++ A DTFRAAA DQL+ WA R G+ +V + A SV Sbjct: 235 GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVV-RGPEGADPASV 293 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV +G G D+VL DT+GRLHT GLM+EL K+V+ + + +E+LLVLD T Sbjct: 294 AFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRR--ASVDEVLLVLDATI 351 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N L QA+ F +VV I+G +LTKLDGTA+GG V V ELG+PVK VG+GEG +DL PF Sbjct: 352 GQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPF 411 Query: 553 DAEAFVEAI 579 + AFV+A+ Sbjct: 412 EPAAFVDAL 420
>FTSY_MYCBO (P66843) Cell division protein ftsY homolog| Length = 422 Score = 181 bits (460), Expect = 1e-45 Identities = 98/189 (51%), Positives = 129/189 (68%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLA +G +V++ A DTFRAAA DQL+ WA R G+ +V + A SV Sbjct: 235 GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVV-RGPEGADPASV 293 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV +G G D+VL DT+GRLHT GLM+EL K+V+ + + +E+LLVLD T Sbjct: 294 AFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRR--ASVDEVLLVLDATI 351 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N L QA+ F +VV I+G +LTKLDGTA+GG V V ELG+PVK VG+GEG +DL PF Sbjct: 352 GQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPF 411 Query: 553 DAEAFVEAI 579 + AFV+A+ Sbjct: 412 EPAAFVDAL 420
>FTSY_MYCLE (O33010) Cell division protein ftsY homolog| Length = 430 Score = 180 bits (456), Expect = 3e-45 Identities = 97/189 (51%), Positives = 128/189 (67%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLA +G +V++ A DTFRAAA DQL+ WA R G+E+V + A SV Sbjct: 243 GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAELV-RGVEGADPASV 301 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AV +G G D+V+ DT+GRLHT GLM+EL K+V+ + A +E+LLVLD T Sbjct: 302 AFDAVDKGIGAGADVVVIDTAGRLHTKVGLMDELDKIKRVVTRR--AAVDEVLLVLDATI 359 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N L Q + F +VV ITG +LTKLDGTA+GG V + ELG+PVK VG+GEG +DL PF Sbjct: 360 GQNGLTQVRVFAEVVDITGAVLTKLDGTAKGGIVFRIQRELGVPVKLVGLGEGPDDLAPF 419 Query: 553 DAEAFVEAI 579 + FV+A+ Sbjct: 420 EPAVFVDAL 428
>FTSY_MYCPN (P75362) Cell division protein ftsY homolog| Length = 348 Score = 171 bits (434), Expect = 1e-42 Identities = 88/186 (47%), Positives = 120/186 (64%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTSL KLA + + +VLM AGDTFRA A QL WA+R G +IV+ N K+ + P+V Sbjct: 148 GKTTSLAKLADQLTKQNKRVLMVAGDTFRAGAVAQLAEWAQRIGCDIVLPNPKE-ETPAV 206 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + + V++G + +D VLCDTSGRL LM EL +++ K P E LLVLDGTT Sbjct: 207 IFRGVQQGIQNEYDFVLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQETLLVLDGTT 266 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + L QAK FN+ +TG ILTK+D +++GG ++++ D +PVK +G GE DL F Sbjct: 267 GQSGLAQAKVFNEFTELTGIILTKMDSSSKGGIILAIKDLFNLPVKLIGFGETTADLAAF 326 Query: 553 DAEAFV 570 D E +V Sbjct: 327 DLEQYV 332
>FTSY_MYCGE (P47539) Cell division protein ftsY homolog| Length = 346 Score = 169 bits (427), Expect = 7e-42 Identities = 87/186 (46%), Positives = 119/186 (63%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+L K+A F + +VL+ AGDTFRA A +QL WA+ +IV+ N K+ Q P+V Sbjct: 148 GKTTTLAKIADFFIKQNKRVLLVAGDTFRAGAIEQLNQWAKLLNCDIVLPNPKE-QTPAV 206 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + + VK+G + +D VLCDTSGRL LM EL ++I K P+E LLVLDGT Sbjct: 207 IFRGVKKGIDDKYDFVLCDTSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTV 266 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G L QAK FN+ +TG +LTK+DG+A+GG ++++ D +PVK +G GE DL F Sbjct: 267 GQTGLSQAKVFNEFSKLTGIVLTKMDGSAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIF 326 Query: 553 DAEAFV 570 D E +V Sbjct: 327 DLEKYV 332
>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog| Length = 504 Score = 167 bits (422), Expect = 3e-41 Identities = 79/189 (41%), Positives = 123/189 (65%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKLA K G ++AA DTFRAAA +Q+++W ER+G ++ + + +V Sbjct: 313 GKTTTIGKLAFMAKQSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAAV 372 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + + + +++L DT+GRL LM+EL +++I K P A E LLVLD T Sbjct: 373 VYDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATL 432 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N L+QA+ F + ++G +LTKLDG+A+GG ++V +L +P++F+G GEG+EDL+PF Sbjct: 433 GQNGLRQAEVFAEAAKLSGVVLTKLDGSAKGGVALAVAQQLNLPIRFIGAGEGIEDLRPF 492 Query: 553 DAEAFVEAI 579 + FVEA+ Sbjct: 493 SSYEFVEAL 501
>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog| Length = 397 Score = 163 bits (412), Expect = 4e-40 Identities = 86/189 (45%), Positives = 120/189 (63%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT +GKLA +K +G V++AAGDTFRAAA DQL++W E S VI + + SV Sbjct: 203 GKTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQLKLWGE-INSVSVITREIGSDPASV 261 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + A+K K + DI++ DT+GRLH LMEEL K+VI K E +LVLD Sbjct: 262 VYDAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKKIKRVIHKIDSTISQETMLVLDACI 321 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N ++Q K F++ + +TG ++TKLD TA+GG + S+ E IPV+++ GE ED+Q F Sbjct: 322 GQNSIKQVKIFHESLNVTGLVITKLDSTAKGGVIFSIAQEFLIPVRYISFGEDFEDIQVF 381 Query: 553 DAEAFVEAI 579 ++ FV AI Sbjct: 382 NSNIFVNAI 390
>FTSY_BUCAI (P57137) Cell division protein ftsY homolog| Length = 378 Score = 157 bits (398), Expect = 2e-38 Identities = 78/190 (41%), Positives = 123/190 (64%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA ++K EG +++AA DTFRAA +QL+ + ++ A +V Sbjct: 189 GKTTTVAKLAEKYKLEGKSIMLAAADTFRAAGIEQLQTLGKLNNIPVIAQRSGSDPA-AV 247 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + AVK K + D+++ DT+GRLH L+EEL +VI K AP+E LL++D Sbjct: 248 IFDAVKSAKSKKIDVLIIDTAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKLLIIDSCN 307 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N +QQ + F+ + +TG I+TKLDGTA+GG V S+ D+ IP++++G+GE ++DL F Sbjct: 308 GQNTIQQTEIFHKALNLTGIIITKLDGTAKGGVVFSLADQFQIPIRYIGIGEKMQDLGHF 367 Query: 553 DAEAFVEAIF 582 +++ F+E+IF Sbjct: 368 NSQEFIESIF 377
>FTSY_RICPR (O05948) Cell division protein ftsY homolog| Length = 303 Score = 156 bits (395), Expect = 4e-38 Identities = 81/189 (42%), Positives = 116/189 (61%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GKL+ + EG KV +AA DTFRAAA +QL W R + ++I A SV Sbjct: 113 GKTTTIGKLSALYSAEGKKVAVAACDTFRAAAINQLSSWVHRANA-LLITGKASADPASV 171 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 +A++ ++ DI+ DT+GRLH N LM+EL KVI K AP +L++D T Sbjct: 172 AYRAIEESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAIT 231 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N Q + FNDV +TG I+TKLDG+A+ G +V V + +PV F+G+GE +EDL+ F Sbjct: 232 GQNTYNQIEYFNDVTNLTGLIVTKLDGSAKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIF 291 Query: 553 DAEAFVEAI 579 + F ++ Sbjct: 292 NRHDFSRSL 300
>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog| Length = 351 Score = 152 bits (383), Expect = 9e-37 Identities = 76/190 (40%), Positives = 120/190 (63%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA ++K G V++AA DTFRAA +QL+I +R VI + SV Sbjct: 161 GKTTTVSKLAKKYKLAGKSVMLAAADTFRAAGIEQLQILGKRNNIP-VISQSSGSDPASV 219 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 AVK + D+++ DT+GRLH L+EEL +VI K AP+EI+L++D Sbjct: 220 AFDAVKSAISKKIDVLIIDTAGRLHNKLHLLEELKKMVRVIKKLNLSAPHEIMLIIDACN 279 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G N ++Q + F+ + +TG ++TKLDGTA+GG + S+ ++ IP++++G+GE DL F Sbjct: 280 GQNTIKQTEMFHKAINLTGLVITKLDGTAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVF 339 Query: 553 DAEAFVEAIF 582 ++ F+++IF Sbjct: 340 NSNDFIKSIF 349
>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291| Length = 409 Score = 143 bits (361), Expect = 3e-34 Identities = 81/190 (42%), Positives = 119/190 (62%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA++ K +G V++AAGDTFRA A +QLE A+ G + VI + A + +V Sbjct: 214 GKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVK-VIKHKPGADSAAV 272 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + A++ K G D+VL DT+GR TN LMEE+ KKV+ P+ ++ V D T Sbjct: 273 IYDAIQHAKARGIDVVLADTAGRQATNVNLMEEI---KKVVRVT---KPDLVIFVGDALT 326 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + + QA+EFN V I G ILTK+D A+GG +S+ +G P+ ++GVG+ +DL F Sbjct: 327 GNDAVYQAEEFNRAVNIDGIILTKVDADAKGGAALSIGYAIGKPILYLGVGQRYQDLIEF 386 Query: 553 DAEAFVEAIF 582 DA+ V +F Sbjct: 387 DADWMVRKLF 396
>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)| Length = 454 Score = 143 bits (361), Expect = 3e-34 Identities = 80/189 (42%), Positives = 117/189 (61%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++GK+A+ K G KV +++ D R AA QL+ AER G + ++ A + Sbjct: 107 GKTTTIGKIANLLKKGGHKVAVSSTDLRRPAAMLQLQRLAERVGVPYY-EFEEGLGAVEI 165 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 +AVKR K E D +L DT+GRLH + LM+EL K+V P+EIL V D Sbjct: 166 ARRAVKRAKEESVDYLLLDTAGRLHVDEELMKELQEIKEVTN------PSEILYVADAMQ 219 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G L+ AK F++ +G+TG ++TK+DG ARGG +SV + LG+P+KF+GVGE +ED++PF Sbjct: 220 GQTALETAKTFHERLGLTGVVITKMDGDARGGLALSVKEVLGVPIKFIGVGEKIEDIEPF 279 Query: 553 DAEAFVEAI 579 + + I Sbjct: 280 YPDRIAQRI 288
>FTSY_HELPY (O25458) Cell division protein ftsY homolog| Length = 293 Score = 143 bits (360), Expect = 4e-34 Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 1/188 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA + K L+ AGDTFRAAA QL++W E+ +++ + K+ PS Sbjct: 98 GKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVI--SAKEGSDPSS 155 Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 L+ ++ + D V DT+GRLH L EL + +K L AP L+LDGT Sbjct: 156 LAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGT 215 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G + L QAK F++ + + G I+TKLDGT++GG ++SV+ EL +P+ ++G+GE +DL Sbjct: 216 QGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIA 275 Query: 550 FDAEAFVE 573 FD E F+E Sbjct: 276 FDEERFIE 283
>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog| Length = 293 Score = 142 bits (357), Expect = 9e-34 Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 1/188 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA + K L+ AGDTFRAAA QL++W E+ +++ + K+ PS Sbjct: 98 GKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVI--SAKEGSDPSS 155 Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 L+ ++ + D V DT+GRLH L EL +K L AP L+LDGT Sbjct: 156 LAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGT 215 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G + L QAK F++ + + G I+TKLDGT++GG ++SV+ EL +P+ ++G+GE +DL Sbjct: 216 QGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIA 275 Query: 550 FDAEAFVE 573 FD E F+E Sbjct: 276 FDEERFIE 283
>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast| precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) Length = 564 Score = 132 bits (333), Expect = 6e-31 Identities = 76/180 (42%), Positives = 101/180 (56%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT KLA K +G ++ AGD +R AA DQL I E+ G + A + Sbjct: 188 GKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPA-DI 246 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 Q +K K+ D+V+ DT+GRL + G+M+EL KK + P E+LLV+D T Sbjct: 247 AKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLN------PTEVLLVVDAMT 300 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G FN +GITG ILTKLDG +RGG +SV + G P+K VG GE +EDL+PF Sbjct: 301 GQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 360
>SRP54_SYNP7 (Q55311) Signal sequence-binding protein| Length = 485 Score = 132 bits (333), Expect = 6e-31 Identities = 77/189 (40%), Positives = 106/189 (56%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA + EG L+ A D +R AA DQL ++ V + A + Sbjct: 112 GKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVP-VFELGSDANPVEI 170 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 Q V++ ++EG D V+ DT+GRL + +MEEL K+ IA P+E+LLV+D Sbjct: 171 ARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEAIA------PHEVLLVVDSMI 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + F++ +GITG ILTKLDG +RGG +S+ G P+KFVG+GE VE LQPF Sbjct: 225 GQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKVEALQPF 284 Query: 553 DAEAFVEAI 579 E I Sbjct: 285 HPERMASRI 293
>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)| Length = 451 Score = 132 bits (331), Expect = 1e-30 Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA + G K + A DT+R AA +QL+ AE+ I D + + Sbjct: 112 GKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDI 171 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + + +++ K+ D+++ DT+GR GL+EE+ K++ P+EI+LV+DGT Sbjct: 172 VKEGMEKFKKA--DVLIIDTAGRHKEEKGLLEEMKQIKEITN------PDEIILVIDGTI 223 Query: 373 GLNMLQQAKEFNDVVGITG-FILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F + VG G I+TKLDG+A+GG +S V E P+KF+G+GEG++DL+P Sbjct: 224 GQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEP 283 Query: 550 FDAEAFVEAI 579 FD + F+ + Sbjct: 284 FDPKKFISRL 293
>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 131 bits (329), Expect = 2e-30 Identities = 68/186 (36%), Positives = 112/186 (60%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLAH K + KVL+ A D R AA +QL++ E+ G E+ + +K + + Sbjct: 106 GKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVK--EI 163 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 S A+KR K FD++L D++GRL + LM+EL K+++ P+E+L V D + Sbjct: 164 ASNALKRAKEAQFDVLLVDSAGRLAIDKELMQELKEVKEILN------PHEVLYVADALS 217 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + ++ A FN+ +G++G +L+K D ++GG + + +LG+P++F+G GE + DL F Sbjct: 218 GQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVF 277 Query: 553 DAEAFV 570 E V Sbjct: 278 VPERIV 283
>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)| Length = 429 Score = 130 bits (327), Expect = 3e-30 Identities = 75/183 (40%), Positives = 108/183 (59%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA +K +G + L+ A DT R AAR+QL + E+ G ++ D ++ S+ Sbjct: 109 GKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPE-SI 167 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + ++ + E D++L DT+GRL + LM EL K+V+ P+E+LLVLD T Sbjct: 168 RRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLG------PDEVLLVLDAMT 221 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G L A+ F++ VG+TG +LTKLDG ARGG +S G P+ F GV E E L+PF Sbjct: 222 GQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPF 281 Query: 553 DAE 561 E Sbjct: 282 YPE 284
>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 130 bits (326), Expect = 4e-30 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRF-KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTT+ GKLA+ K K ++ A D +R AA QLE ++ + D+ + Sbjct: 113 GKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPV-E 171 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + QA+++ K E +D V+ DT+GRLH ++ LM+EL + K++ P EI LV+D Sbjct: 172 IAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKEI------ANPEEIFLVVDSM 225 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 TG + + AK FN+ +G+TG +LTKLDG RGG +S+ P+KF G+GE ++ L+P Sbjct: 226 TGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEP 285 Query: 550 FDAEAFVEAI 579 F E I Sbjct: 286 FHPERMASRI 295
>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 129 bits (323), Expect = 8e-30 Identities = 67/186 (36%), Positives = 112/186 (60%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLAH K + KVL+ A D R AA +QL++ E+ G E+ + +K + + Sbjct: 106 GKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENKSVK--EI 163 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + A+KR K FD+++ D++GRL + LM+EL K+V+ P+E+L V D + Sbjct: 164 ANNALKRAKEAQFDVLIVDSAGRLAIDKELMQELKEVKEVLN------PHEVLYVADALS 217 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + ++ A FN+ +G++G +L+K D ++GG + + +LG+P++F+G GE + DL F Sbjct: 218 GQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVF 277 Query: 553 DAEAFV 570 E V Sbjct: 278 MPERIV 283
>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)| Length = 448 Score = 127 bits (318), Expect = 3e-29 Identities = 70/189 (37%), Positives = 107/189 (56%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS+ KLA + G KV + DT+R A QL + G E+ D ++K A + Sbjct: 112 GKTTSVAKLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEK-DAVKL 170 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + V+ + +G D+++ D++GR GL+EE+ + I P+E++LV+DGT Sbjct: 171 AREGVEHFREKGVDVIIVDSAGRHKEEKGLIEEMRQISEAIK------PHEVILVIDGTI 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QA F + I I+TKLDG+A+GG +S V G P+KF+G GE ++DL+PF Sbjct: 225 GQQAYNQAMAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPF 284 Query: 553 DAEAFVEAI 579 D + FV + Sbjct: 285 DPKRFVSRL 293
>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 126 bits (317), Expect = 4e-29 Identities = 72/189 (38%), Positives = 105/189 (55%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA F+ G KV + DT+R A QL +R E V N ++ A + Sbjct: 112 GKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIE-VFGNPQEKDAIKL 170 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + V K +G DI++ DT+GR + L+EE+ VI P+E++LV+DGT Sbjct: 171 AKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIH------PHEVILVIDGTI 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QA F + I I+TKLDG+A+GG +S V G P+KF+G GE ++D++PF Sbjct: 225 GQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPF 284 Query: 553 DAEAFVEAI 579 D FV + Sbjct: 285 DPPRFVSRL 293
>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 126 bits (316), Expect = 5e-29 Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTT+ GKLA K + K ++ A D +R AA DQL AE+T S K QAP Sbjct: 111 GKTTTCGKLAVWLKKQFQQKAMLVALDIYRPAAIDQLATLAEQTESVFFA---KGTQAPD 167 Query: 190 -VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 +AVK K G ++CDT+GRL TN LM+ELV+ K + P+EIL+V+DG Sbjct: 168 QTTKEAVKTFKESGCQAIICDTAGRLQTNQELMDELVAIKNELH------PDEILMVVDG 221 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 +G ++ AKEF++ + +TGFI+TKLD AR G +S+ L +P+K +G E + L+ Sbjct: 222 LSGQEIINVAKEFHNRLKLTGFIITKLDSDARAGAALSLTSLLEVPIKLMGTSEKLTGLE 281 Query: 547 PFDAEAFVEAI 579 F E I Sbjct: 282 QFHPERIASRI 292
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 125 bits (315), Expect = 7e-29 Identities = 75/190 (39%), Positives = 110/190 (57%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ K+ + K ++AA DTFRAAA++QL A + ++ I A SV Sbjct: 185 GKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQL-IRGKYGADPASV 243 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 A+ K D+VL DT+GR+H + L+EEL K+V+ A P+ +L+LD Sbjct: 244 AFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEEL---KRVLRIA---KPDFRILILDSLA 297 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + L+QA+ F + VG ILTK+D A+GG +S+ EL PV ++GVG+ +DL PF Sbjct: 298 GSDALEQARHFENNVGYDAVILTKVDADAKGGIALSLAYELKKPVVYMGVGQNYDDLIPF 357 Query: 553 DAEAFVEAIF 582 + FVE IF Sbjct: 358 SPDWFVERIF 367
>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)| Length = 482 Score = 125 bits (313), Expect = 1e-28 Identities = 76/180 (42%), Positives = 99/180 (55%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA + + LM A D +R AA DQL+ ++ V D A + Sbjct: 112 GKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVP-VFDLGSDANPVEI 170 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 Q V++ K G D VL DT+GRL + +M EL K+V+ P++ LLV+D T Sbjct: 171 ARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELAEIKQVVK------PDDTLLVVDAMT 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G F++ +GITG ILTKLDG RGG +SV G P+KFVGVGE VE LQPF Sbjct: 225 GQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPF 284
>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)| (p48) Length = 453 Score = 124 bits (312), Expect = 2e-28 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTTS+GKL + + K VL+ + D +R AA QLE AE+ G + +D + Sbjct: 112 GKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF-FPSDVGQKPVD 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 +++ A+K K + +D++L DT+GRLH + +M+E+ K+V A P E L V+D Sbjct: 171 IVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI---KQVHASI---NPVETLFVVDAM 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 TG + AK FN+ + +TG +LTK+DG ARGG +S+ G P+KF+GVGE E L+P Sbjct: 225 TGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEP 284 Query: 550 FDAEAFVEAI 579 F + I Sbjct: 285 FHPDRIASRI 294
>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 124 bits (312), Expect = 2e-28 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTTS+GKL + + K VL+ + D +R AA QLE AE+ G + +D + Sbjct: 112 GKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF-FPSDVGQKPVD 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 +++ A+K K + +D++L DT+GRLH + +M+E+ K+V A P E L V+D Sbjct: 171 IVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI---KQVHASI---NPVETLFVVDAM 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 TG + AK FN+ + +TG +LTK+DG ARGG +S+ G P+KF+GVGE E L+P Sbjct: 225 TGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEP 284 Query: 550 FDAEAFVEAI 579 F + I Sbjct: 285 FHPDRIASRI 294
>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 124 bits (312), Expect = 2e-28 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTTS+GKL + + K VL+ + D +R AA QLE AE+ G + +D + Sbjct: 112 GKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF-FPSDVGQKPVD 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 +++ A+K K + +D++L DT+GRLH + +M+E+ K+V A P E L V+D Sbjct: 171 IVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI---KQVHASI---NPVETLFVVDAM 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 TG + AK FN+ + +TG +LTK+DG ARGG +S+ G P+KF+GVGE E L+P Sbjct: 225 TGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEP 284 Query: 550 FDAEAFVEAI 579 F + I Sbjct: 285 FHPDRIASRI 294
>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 122 bits (307), Expect = 6e-28 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAE--RTGSEIVIDNDKKAQAP 186 GKTT+ KLA R +N+ KVL+ + DT+R AA++QL I A + S ++ +K Sbjct: 114 GKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGEKPLD-- 171 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 ++ +A+ K +D+V+ DT+GR + +MEE ++ KK++ P E LLV+D Sbjct: 172 -IVKRAIAEAKISAYDVVIYDTAGRTQIDKAMMEEALAIKKIVE------PTETLLVIDS 224 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 TG + + A FN+ + I+G IL+++DG ++GG +SV P+KF+ GE + DL+ Sbjct: 225 MTGQDAVVTASSFNEKLAISGLILSRIDGDSKGGAALSVKYITKKPIKFLSSGENLIDLE 284 Query: 547 PFDAEAFVEAI 579 FDAE I Sbjct: 285 EFDAERLASRI 295
>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 122 bits (307), Expect = 6e-28 Identities = 71/189 (37%), Positives = 108/189 (57%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ K+A FK+ G KV + A DT+R AA +QL AE G + +K A + Sbjct: 105 GKTTTTAKMAKYFKDRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEK-DAVKI 163 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + A++ K + D+++ DT+GR L++E++ +V P+ LLVLD Sbjct: 164 VKNALE--KLKDHDMIIIDTAGRHALEDELIDEMIKIAEV------ARPDYKLLVLDAAI 215 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G +QA+ F++ +GI G I+TK DGTA+GG +S ++GIP+ F+G GE VED + F Sbjct: 216 GQLASKQAQAFHEAIGINGIIITKFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERF 275 Query: 553 DAEAFVEAI 579 D FV + Sbjct: 276 DPAGFVSRL 284
>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)| Length = 456 Score = 122 bits (305), Expect = 1e-27 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ GKLA F +G + A D R AA DQL+ A ++ D +K Sbjct: 109 GKTTTAGKLARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPV--- 165 Query: 193 LSQAVKRGKREGFDIV--LCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 + +K G + D+ + DTSGR + L +E+ K+ +A P+E+L+++D Sbjct: 166 --RLIKHGLEQLKDVAVKIIDTSGRDSMDAELFDEIRRIKEAVA------PDEVLMIIDA 217 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 T G +AK FND +G+TG I+TK+DGTA+GG +S V E+ +P+ F+G GE ++DL+ Sbjct: 218 TMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLE 277 Query: 547 PFDAEAFVEAI 579 FD + F+ + Sbjct: 278 VFDPKKFLSRL 288
>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)| Length = 487 Score = 122 bits (305), Expect = 1e-27 Identities = 72/189 (38%), Positives = 106/189 (56%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA +KN G K + DTFRA A +QL++ A+R G +++ V Sbjct: 113 GKTTTITKLALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPF-FGIKEESDPVKV 171 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 S+ V+ ++E DI+L DTSGR + L +E+ S + I P+ I+ V+DG Sbjct: 172 ASEGVRTFRKEKNDIILVDTSGRHKQDKELFKEMQSVRDAIK------PDSIIFVMDGAI 225 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QAK F D V + I+TKLDG + GG +S V P+ F+G GE V +++ F Sbjct: 226 GQAAFGQAKAFKDAVEVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEF 285 Query: 553 DAEAFVEAI 579 DAE+FV + Sbjct: 286 DAESFVRQL 294
>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)| Length = 516 Score = 121 bits (304), Expect = 1e-27 Identities = 75/181 (41%), Positives = 100/181 (55%), Gaps = 1/181 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRF-KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTT GKLA++ K E A+ LM A D +R AA DQL+ ++ V D + A Sbjct: 113 GKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVP-VFDMGTEHSAVE 171 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 ++SQ + + K D VL DT+GRL + LM EL K + PNEILLV+D Sbjct: 172 IVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL------ANPNEILLVVDSM 225 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G A+EFN + +TG ILTK+DG RGG +SV G P+KF G GE + D++ Sbjct: 226 IGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIET 285 Query: 550 F 552 F Sbjct: 286 F 286
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 121 bits (303), Expect = 2e-27 Identities = 69/189 (36%), Positives = 108/189 (57%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA F+ G KV + DT+R A QL+ + E+ D ++K A + Sbjct: 112 GKTTTVAKLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEK-DAIKL 170 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + V+ K +G D+++ DT+GR L+EE+ ++I+ + P+E++LV+DGT Sbjct: 171 AKEGVEHFKAKGVDLIIVDTAGRHKEEKDLIEEM----RMISNEIK--PHEVILVIDGTI 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QA F + I I+TKLD +A+GG +S V G P+KF+G GE ++DL+PF Sbjct: 225 GQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPF 284 Query: 553 DAEAFVEAI 579 D FV + Sbjct: 285 DPARFVSRL 293
>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)| Length = 462 Score = 120 bits (300), Expect = 4e-27 Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTTS+GKLA + K VL+ + D +R AA QLE A+ G + +D K Sbjct: 112 GKTTSVGKLAKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDF-FPSDVKQNPVD 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + A+ K + +D+++ DT+GRLH + +M+E+ K + AL P E L +D Sbjct: 171 IAKSALADAKLKFYDVLIVDTAGRLHVDTEMMDEI----KQVHAALN--PIETLFTVDAM 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 TG + AK FN+ + +TG ILTK+DG ARGG +S+ G P+KF+GVGE E L+P Sbjct: 225 TGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTEALEP 284 Query: 550 FDAEAFVEAI 579 F + I Sbjct: 285 FHPDRVASRI 294
>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)| Length = 447 Score = 119 bits (297), Expect = 9e-27 Identities = 71/182 (39%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRF-KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP- 186 GKTT+ KLA+ K KVL+ D +R A +QL ++T +++ +K Q P Sbjct: 113 GKTTTANKLAYLLNKKNKKKVLLVGLDIYRPGAIEQLVQLGQKTNTQVF---EKGKQDPV 169 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 QA++ K FD+V+ DT+GRL + LM+EL + KK + PNEILLV+DG Sbjct: 170 KTAEQALEYAKENNFDVVILDTAGRLQVDQVLMKELDNLKKKTS------PNEILLVVDG 223 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 +G ++ EFND + ++G ++TKLDG ARGG +S+ +P+KF+G GEG L Sbjct: 224 MSGQEIINVTNEFNDKLKLSGVVVTKLDGDARGGATLSISYLTKLPIKFIGEGEGYNALA 283 Query: 547 PF 552 F Sbjct: 284 AF 285
>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 119 bits (297), Expect = 9e-27 Identities = 69/189 (36%), Positives = 108/189 (57%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT++ KLA F+ G KV + DT+R A QL+ + E+ D ++K A + Sbjct: 112 GKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEK-DAVKL 170 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + V+ K D+++ DT+GR L+EE+ ++I++ + P+E++LV+DGT Sbjct: 171 AKEGVEYFKTRDVDLIIVDTAGRHKEEKDLIEEM----RMISEEI--RPHEVILVIDGTI 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QA F + I I+TKLD +A+GG +S V G P+KF+GVGE ++DL+PF Sbjct: 225 GQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPF 284 Query: 553 DAEAFVEAI 579 D FV + Sbjct: 285 DPARFVSRL 293
>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)| Length = 440 Score = 118 bits (296), Expect = 1e-26 Identities = 74/189 (39%), Positives = 99/189 (52%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS KLA F+ +G K + A DTFR A QL+ AE+ + A + Sbjct: 109 GKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFY-GEEGNPDAVEI 167 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 +K E +DI + DT+GR L+EE+ V P+ +VLD Sbjct: 168 TKNGLKA--LEKYDIRIVDTAGRHALEADLIEEMERIHAV------AKPDHKFMVLDAGI 219 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QQA FND VGITG I+TKLDGTA+GG +S V E P+ F+GVGE ED + F Sbjct: 220 GQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKF 279 Query: 553 DAEAFVEAI 579 +A+ F+ + Sbjct: 280 EADRFISRL 288
>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)| Length = 451 Score = 118 bits (296), Expect = 1e-26 Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTTSL KL KN+ K+L+ + DT+RAAA +QL+I +++ + ++DK Sbjct: 112 GKTTSLAKLGKWIKNKYKKKILITSTDTYRAAAIEQLKILSDQIEIDF-FESDKHHTPIE 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + A+K K + +D++L DT+GRLH + +M E+ + VI+KA+ E LL++D Sbjct: 171 ITKNAIKYAKLKLYDVLLIDTAGRLHIDKKMMNEIQQIQ-VISKAI-----ETLLIVDSM 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G + + AK FN+ + I+G ILTK DG +R G +S+ G P+KF+G GE + L+P Sbjct: 225 MGQDAINMAKIFNNDLLISGIILTKTDGDSRSGIALSMRYITGKPIKFIGTGEKIISLEP 284 Query: 550 FDAEAFVEAI 579 F E + I Sbjct: 285 FHPERIADRI 294
>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 118 bits (296), Expect = 1e-26 Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEI--VIDNDKKAQAP 186 GKTT+ GKLA R KN+ KVL+ + DT+R AA++QL I A + ++ +K Sbjct: 114 GKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIIANSVNIDSLPIVKGEKPLD-- 171 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 ++ +A+ + +D+V+ DT+GR+ + +MEE ++ KK++ P E LLV+D Sbjct: 172 -IVKRAIGEAQISAYDVVIYDTAGRIQIDNVMMEEALAIKKILN------PTETLLVIDS 224 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 TG + + AK F++ + I+G IL+++DG +GG +SV P+KF+ GE + DL+ Sbjct: 225 MTGQDAVITAKTFSEKLEISGLILSRIDGDTKGGAALSVKYFTQKPIKFLSSGEKLTDLE 284 Query: 547 PFDAEAFVEAI 579 F+AE I Sbjct: 285 EFNAERLASRI 295
>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 541 Score = 118 bits (295), Expect = 1e-26 Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 5/194 (2%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERT-----GSEIVIDNDKKA 177 GKTTS KLA + G KV + DTFRA A DQL+ A R GS D K A Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180 Query: 178 QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLV 357 + + + + K+E FDI++ DTSGR H L +E++ VI PN+ ++V Sbjct: 181 E------EGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIK------PNQTIMV 228 Query: 358 LDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE 537 LD + G QQ+K F + ILTK+DG ARGG +S V P+ F+G GE + Sbjct: 229 LDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIH 288 Query: 538 DLQPFDAEAFVEAI 579 DL+ F ++F+ + Sbjct: 289 DLEKFSPKSFISKL 302
>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)| Length = 442 Score = 117 bits (294), Expect = 2e-26 Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDND-KKAQAPS 189 GKTT++GKLA + +G V + DT+R AA +QL+ + E G ++ I D + A Sbjct: 111 GKTTTIGKLARYLRKKGFTVGVVCTDTWRPAALEQLKQYTE--GQDVSIYGDPQNRDALD 168 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + + R +++ D+++ DT+GR L+ E+ ++ P+E +LV+DGT Sbjct: 169 LAEKGLARFQKK--DVIIFDTAGRHKEEKDLLREMEELSAIVE------PHEAILVIDGT 220 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G +QA F I I+TKLDG+A+GG +S V E+G P+KF+G GE ++DL+ Sbjct: 221 IGQQAREQALAFRKATDIGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGERIDDLEV 280 Query: 550 FDAEAFVEAI 579 FD E F+ + Sbjct: 281 FDPERFISRL 290
>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 117 bits (292), Expect = 3e-26 Identities = 73/189 (38%), Positives = 99/189 (52%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS KLA F+ +G K + A DTFR A QL+ +E+ + A + Sbjct: 109 GKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFY-GEEGNPDAVEI 167 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 +K E +DI + DT+GR L+EE+ V P+ +VLD Sbjct: 168 TIHGLKA--LEKYDIKIVDTAGRHALEADLIEEMERIHAV------AKPDHKFMVLDAGI 219 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QQA FND VGITG I+TKLDGTA+GG +S V E P+ F+GVGE ED + F Sbjct: 220 GQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKF 279 Query: 553 DAEAFVEAI 579 +A+ F+ + Sbjct: 280 EADRFISRL 288
>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)| Length = 499 Score = 115 bits (289), Expect = 7e-26 Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + + P V Sbjct: 112 GKTTTCTKLAYHYQKKGWKTCLVCADTFRAGAFDQLK--QNATKARVPFYGSYTEMDPVV 169 Query: 193 LSQ-AVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 ++Q V++ K + F++++ DTSGR L EE++ + I P+ I+ V+DGT Sbjct: 170 IAQEGVEKFKEDSFEVIIVDTSGRHKQEESLFEEMLQVSQAID------PDNIIFVMDGT 223 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QA+ F + V + I+TKLDG A+GG +S V P+ F+G GE +++++P Sbjct: 224 IGQACESQARAFKEKVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEP 283 Query: 550 FDAEAFVEAI 579 F + FV + Sbjct: 284 FKTKPFVSKL 293
>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 115 bits (287), Expect = 1e-25 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + I P + Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170 Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+D + Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQ------PDNIVYVMDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D +P Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 285 FKTQPFISKL 294
>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 114 bits (286), Expect = 2e-25 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + I P + Sbjct: 113 GKTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170 Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+D + Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQ------PDNIVYVMDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D +P Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 285 FKTQPFISKL 294
>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 114 bits (286), Expect = 2e-25 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + I P + Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170 Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+D + Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D +P Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 285 FKTQPFISKL 294
>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 114 bits (286), Expect = 2e-25 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + I P + Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170 Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+D + Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D +P Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 285 FKTQPFISKL 294
>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 114 bits (286), Expect = 2e-25 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + I P + Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170 Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+D + Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D +P Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 285 FKTQPFISKL 294
>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 114 bits (286), Expect = 2e-25 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA+ ++ +G K + DTFRA A DQL+ T + I P + Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170 Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+D + Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D +P Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 285 FKTQPFISKL 294
>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)| Length = 455 Score = 113 bits (283), Expect = 4e-25 Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTTS GKL+ F +G + A D R AA +QL+ AE ++ D +K Sbjct: 109 GKTTSAGKLSRFFMKKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPV--- 165 Query: 193 LSQAVKRGKR--EGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 + +K G + + + DTSGR + L+EE+ K+ + P+++L+V+D Sbjct: 166 --KIIKNGLEVLKDAQVKIIDTSGRDSLDSDLIEEIRRIKEAVK------PDQVLMVIDA 217 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 T G ++K ND VG+TG I+TK+DGTA+GG +S V ++ +P+ F+G GE ++D++ Sbjct: 218 TMGQQAGPESKAINDAVGVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDME 277 Query: 547 PFDAEAFVEAI 579 FD + F+ + Sbjct: 278 IFDPKKFLSRL 288
>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 111 bits (278), Expect = 1e-24 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAG-DTFRAAARDQLEIWAERTGSEIVIDNDKK-AQAP 186 GKTT+ GKLA+ + + + M G D +R AA +QLE +++T S + A+ Sbjct: 111 GKTTTCGKLAYWLEKKYKQKTMLVGLDIYRPAAIEQLETLSQQTNSVFFAQGTQPVAKTT 170 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 A K K + ++CDT+GRL TN LM+ELVS K + P+EI++V+DG Sbjct: 171 KAALSAFKTAKCQ---TIICDTAGRLQTNETLMDELVSVKNELN------PDEIIMVVDG 221 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 +G ++ A+ F+ + +TGFI++KLD AR G +S+ L +P+K +GV E ++ L+ Sbjct: 222 LSGQEIINVAQTFHKRLKLTGFIISKLDSDARAGAALSLASLLQVPIKLIGVSEKLDGLE 281 Query: 547 PFDAEAFVEAI 579 F E I Sbjct: 282 QFHPERIANRI 292
>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 111 bits (277), Expect = 2e-24 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-- 186 GKTT GKLA R + +G L+ A D R AA +QL++ ER G + + + Sbjct: 112 GKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGP 171 Query: 187 ----SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILL 354 +V + + + + FD+V+ DT+GRL G+ EEL++ I A+ P+E+L Sbjct: 172 GDPVAVAAAGLAEARAKHFDVVIVDTAGRL----GIDEELMAQAAAIRDAIN--PDEVLF 225 Query: 355 VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV 534 VLD G + + A F + VG TG LTKLDG ARGG +SV + G+P+ F GE + Sbjct: 226 VLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKL 285 Query: 535 EDLQPFDAEAFVEAI 579 ED F + I Sbjct: 286 EDFDVFHPDRMASRI 300
>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 111 bits (277), Expect = 2e-24 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-- 186 GKTT GKLA R + +G L+ A D R AA +QL++ ER G + + + Sbjct: 112 GKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGP 171 Query: 187 ----SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILL 354 +V + + + + FD+V+ DT+GRL G+ EEL++ I A+ P+E+L Sbjct: 172 GDPVAVAAAGLAEARAKHFDVVIVDTAGRL----GIDEELMAQAAAIRDAIN--PDEVLF 225 Query: 355 VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV 534 VLD G + + A F + VG TG LTKLDG ARGG +SV + G+P+ F GE + Sbjct: 226 VLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKL 285 Query: 535 EDLQPFDAEAFVEAI 579 ED F + I Sbjct: 286 EDFDVFHPDRMASRI 300
>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 110 bits (276), Expect = 2e-24 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 2/188 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA + +G +V + D +R AA +QL AE + +++ A Sbjct: 113 GKTTTAAKLARYLQRKGYRVGLVGADPYRPAAGEQLRQLAEEVDVPVHVEDVDDA----- 167 Query: 193 LSQAVK--RGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 + AVK ++ D+V+ DT+GR + L++EL + I P+E+LLVLD Sbjct: 168 VEMAVKGVEALKDECDVVIVDTAGRDRLSEDLIDELREMAERIE------PHEVLLVLDA 221 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 T G A+ F++ V +TG ++TKLD A+GG +S V G P+KFVG GE V+DL+ Sbjct: 222 TVGQKAGDHAEAFHEAVQLTGVVITKLDTAAKGGGALSAVARTGAPIKFVGTGERVDDLE 281 Query: 547 PFDAEAFV 570 F+ +FV Sbjct: 282 EFNPRSFV 289
>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)| Length = 451 Score = 110 bits (275), Expect = 3e-24 Identities = 66/189 (34%), Positives = 106/189 (56%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ GKLA+ +K +G KV + D +R AA +QL+ ++ G + + +K A + Sbjct: 110 GKTTTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEK-DAVGI 168 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + V++ E +I++ DT+GR YG L+ K I +A+ P+E+ LV+D + Sbjct: 169 AKRGVEKFLSEKMEIIIVDTAGR--HGYGEEAALLEEMKNIYEAIK--PDEVTLVIDASI 224 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G A +FN I I+TK+DGTA+GG +S V G +KF+G GE +++L+ F Sbjct: 225 GQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVF 284 Query: 553 DAEAFVEAI 579 + FV I Sbjct: 285 NPRRFVARI 293
>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 109 bits (272), Expect = 7e-24 Identities = 64/191 (33%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP- 186 GKTT+L KLA K + K+L + D +RAAA QL+I +++ + + + Q P Sbjct: 112 GKTTTLVKLAKWIKEKYKKKILTVSTDIYRAAAIKQLQILSDQVKIDFYLSDT--TQTPI 169 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 ++ +A++ K + +D++L DT+GRLH N +M E+ + + + P E LL++D Sbjct: 170 NITKEAIEHAKLKLYDLLLIDTAGRLHINTEMMNEINTIQNI------SKPIETLLIVDS 223 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 G + + AK+F+ + I+G ++TK D AR G +S+ G P+KF+G GE + L+ Sbjct: 224 MMGQDAINIAKKFSASLSISGIVITKTDSDARSGVALSIRHITGKPIKFIGTGEKLHQLE 283 Query: 547 PFDAEAFVEAI 579 PF E + I Sbjct: 284 PFHPERIADRI 294
>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)| Length = 521 Score = 109 bits (272), Expect = 7e-24 Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 6/195 (3%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDN-----DKKA 177 GKTT GKLA R + +G L+ A D R AA +QL++ ER G + + D Sbjct: 112 GKTTLAGKLAVRLRRQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPDSGP 171 Query: 178 QAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILL 354 P +V S + + + FD+V+ DT+GRL G+ +EL++ I +A+ P+E+L Sbjct: 172 GDPVAVASAGLVEARAKHFDVVIVDTAGRL----GIDDELMAQAGAIREAIN--PDEVLF 225 Query: 355 VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV 534 VLD G + + A F VG TG +LTKLDG ARGG +SV + G+P+ F GE + Sbjct: 226 VLDAMIGQDAVTTAAAFGAGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFATTGEKL 285 Query: 535 EDLQPFDAEAFVEAI 579 +D F + I Sbjct: 286 DDFDVFHPDRMASRI 300
>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)| Length = 445 Score = 106 bits (265), Expect = 4e-23 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEI---VIDNDKKAQA 183 GKTT+ GKLA +K +G KV + A D +R AA DQL + G +I V A Sbjct: 107 GKTTTAGKLALFYKKKGYKVGLVAADVYRPAAYDQLV----QIGKQINVPVYGEPNNTDA 162 Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 363 + + V++ E +DI++ DT+GR +G EE+ +++ P+E++LV+D Sbjct: 163 VGIAKRGVEKFLSEKYDIIIVDTAGR----HGYGEEVKLLEEMKNMYSEIKPDEVILVID 218 Query: 364 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDL 543 + G A F+ I I+TK+DGTA+GG +S V G +KF+G GE +++L Sbjct: 219 ASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGALSAVAATGAAIKFIGTGEKLDEL 278 Query: 544 QPFDAEAFVEAI 579 + F+ FV I Sbjct: 279 EVFNPRRFVSRI 290
>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 106 bits (264), Expect = 6e-23 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ GKLA+ +K G KV + A D +R AA DQL + G ++ + Q P Sbjct: 108 GKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVY--GEPNNQNPIE 165 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + V + DI++ DT+GR YG +L+ K + L P++++LV+D + Sbjct: 166 IAKKGVDIFVKNKMDIIIVDTAGR--HGYGEETKLLEEMKEMYDVLK--PDDVILVIDAS 221 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G A F+ I I+TK+DGTA+GG +S V G +KF+G GE +++L+ Sbjct: 222 IGQKAYDLASRFHQASPIGSVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELET 281 Query: 550 FDAEAFVEAI 579 F+A+ FV I Sbjct: 282 FNAKRFVSRI 291
>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 106 bits (264), Expect = 6e-23 Identities = 66/189 (34%), Positives = 99/189 (52%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA G KV + DT R AA DQL AE+ G + D K A + Sbjct: 111 GKTTTAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGK-DAVEI 169 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + V+ K D+++ DT+GR L++E+ + ++ P+E++LV+D T Sbjct: 170 AKRGVQNFKN--MDVIIVDTAGRHRNEEALLKEVRAIYDAVS------PDEVVLVIDATV 221 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QA+ F + I I+TK+D TARGG ++ V + G VKF+GVGE V++ + F Sbjct: 222 GKMAAAQAEAFMKYLPIHSVIITKMDSTARGGGALAAVAKTGAKVKFIGVGEDVDEFEQF 281 Query: 553 DAEAFVEAI 579 FV + Sbjct: 282 SPRKFVARV 290
>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog| Length = 556 Score = 105 bits (261), Expect = 1e-22 Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 5/194 (2%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERT-----GSEIVIDNDKKA 177 GKTTS KLA +K G KV + DTFRA A DQL+ A + GS + D K Sbjct: 130 GKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYYGSYLEPDPVK-- 187 Query: 178 QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLV 357 + + V++ K+E FDI++ DTSGR L E+V + + P + ++V Sbjct: 188 ----IAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQ------PTQTIMV 237 Query: 358 LDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE 537 +DG+ G QA+ F + ILTK+DG A+GG +S V P+ F+G GE V Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297 Query: 538 DLQPFDAEAFVEAI 579 DL+ F F+ + Sbjct: 298 DLEIFKPTTFISKL 311
>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 536 Score = 104 bits (260), Expect = 2e-22 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTTS KLA ++ G KV + DTFRA A DQL+ T ++I P + Sbjct: 115 GKTTSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLK--QNATKAKIPFFGSYTETDPVA 172 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 V ++ V + K+E F+I++ DTSGR L E+V + P+ ++VLD + Sbjct: 173 VAAEGVAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVK------PDSTIMVLDAS 226 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G Q++ F D ILTK+DG A+GG +S V P+ F+G GE + DL+ Sbjct: 227 IGQAAEPQSRAFKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEA 286 Query: 550 FDAEAFVEAI 579 F + F+ + Sbjct: 287 FSPKQFISKL 296
>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 495 Score = 104 bits (259), Expect = 2e-22 Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K A+ + +G K + DTFRA A DQL+ T S+I P Sbjct: 113 GKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLK--QNATKSKIPYYGSYTGSDPVK 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + V R K+E D+++ DTSGR L EE+ + I++A P+ ++ V+D + Sbjct: 171 IAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEM----RQISEATK--PDLVIFVMDSS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G +QA+ F V + I+TK+DG A+GG +S V PV F+G GE +++ + Sbjct: 225 IGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEV 284 Query: 550 FDAEAFVEAI 579 FDA+ FV + Sbjct: 285 FDAKPFVSRL 294
>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 522 Score = 103 bits (256), Expect = 5e-22 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA ++ G K + A DTFRA A DQL+ A + + + P V Sbjct: 113 GKTTTCSKLALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIK--ARVPYFGSYTETDPVV 170 Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 ++ + V + K + FD+++ DTSGR L E+V I P++ +++LD + Sbjct: 171 IAKEGVDKFKNDRFDVIIVDTSGRHQQEQELFAEMVEISDAIR------PDQTIMILDAS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G Q+K F + I+TKLDG A+GG +S V P+ F+G GE + DL+ Sbjct: 225 IGQAAESQSKAFKETADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLER 284 Query: 550 FDAEAFVEAI 579 F +F+ + Sbjct: 285 FSPRSFISKL 294
>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)| Length = 441 Score = 101 bits (252), Expect = 1e-21 Identities = 63/189 (33%), Positives = 101/189 (53%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ GKLA+ + G KV + + DT R A +QL+ AE G+ + +++ + Sbjct: 108 GKTTTAGKLAYYYVRRGYKVGLVSSDTHRPGAYEQLKRLAEEAGA--MFYGEREGDPAEI 165 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + ++ G +IV+ DT+GR +G EE ++ A A P+E+ LV+D + Sbjct: 166 ARRGLEDLLSRGAEIVIVDTAGR----HGHGEEARLLDEMKAIASKVRPDEVALVIDASI 221 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G + A+ F+ I I+TK+DGTARGG ++ G +KF+G GE + +L+PF Sbjct: 222 GQKAMGLAERFHKSTPIGSIIVTKMDGTARGGGALTAAAVTGARIKFIGTGETLGELEPF 281 Query: 553 DAEAFVEAI 579 FV I Sbjct: 282 APRRFVARI 290
>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 479 Score = 101 bits (251), Expect = 2e-21 Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K A+ + +G K + DTFRA A DQL+ T ++I P Sbjct: 113 GKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLK--QNATKAKIPFYGSYTESDPVK 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + V R K+E D+++ DTSGR L EE+ + +A+A P+ ++ V+D + Sbjct: 171 IAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEM----RQVAEATE--PDLVIFVMDSS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G +QA+ F + V + I+TK+DG A+GG +S V PV F+G GE +++ + Sbjct: 225 IGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284 Query: 550 FDAEAFVEAI 579 FD + FV + Sbjct: 285 FDVKPFVSRL 294
>SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54)| Length = 465 Score = 100 bits (250), Expect = 2e-21 Identities = 60/189 (31%), Positives = 102/189 (53%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ K+A F +G + + DTFR A DQ + ER +E+ D P Sbjct: 109 GKTTTSAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCER--AEVDFYGDPDCDDPVQ 166 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 +++ + D+ + DT+GR L++E+ + V+ P+ LLVLD Sbjct: 167 IAREGLEATEDA-DVHIVDTAGRHALEDDLIDEIEEIEGVVQ------PDLNLLVLDAAI 219 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G +QA++F++ +GI G ++TKLDGTA+GG ++ V+E + F+G+GE V+D++ F Sbjct: 220 GQGAKEQAQQFDESIGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERF 279 Query: 553 DAEAFVEAI 579 + F+ + Sbjct: 280 EPNGFISRL 288
>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 497 Score = 99.8 bits (247), Expect = 5e-21 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K A+ + +G K + DTFRA A DQL+ T ++I P Sbjct: 113 GKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLK--QNATKAKIPFYGSYMESDPVK 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + ++R ++E D+++ DTSGR L EE+ + +A+A P+ ++ V+DG+ Sbjct: 171 IAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEM----RQVAEATK--PDLVIFVMDGS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QA+ F + I+TKLDG A+GG +S V PV F+G GE +++ + Sbjct: 225 IGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEI 284 Query: 550 FDAEAFVEAI 579 FD + FV + Sbjct: 285 FDVKPFVSRL 294
>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 497 Score = 99.8 bits (247), Expect = 5e-21 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K A+ + +G K + DTFRA A DQL+ T ++I P Sbjct: 113 GKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLK--QNATKAKIPFYGSYMESDPVK 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + ++R ++E D+++ DTSGR L EE+ + +A+A P+ ++ V+DG+ Sbjct: 171 IAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEM----RQVAEATK--PDLVIFVMDGS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QA+ F + I+TKLDG A+GG +S V PV F+G GE +++ + Sbjct: 225 IGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEI 284 Query: 550 FDAEAFVEAI 579 FD + FV + Sbjct: 285 FDVKPFVSRL 294
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 99.8 bits (247), Expect = 5e-21 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ KLA ++ G K + DTFRA A DQL+ T ++I P++ Sbjct: 114 GKTTTCTKLARHYQMRGFKTALVCADTFRAGAFDQLK--QNATKAKIPYYGSLTQTDPAI 171 Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 ++ + V + K+E F+I++ DTSGR L E+ + + P++ +LVLD T Sbjct: 172 VAAEGVAKFKKERFEIIIVDTSGRHKQEEELFTEMTQIQTAVT------PDQTILVLDST 225 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G Q+ F I+TK DG A GG +S V P+ ++G GE + DL+ Sbjct: 226 IGQAAEAQSSAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLER 285 Query: 550 FDAEAFVEAI 579 F+ +AF++ + Sbjct: 286 FEPKAFIQKL 295
>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 493 Score = 99.4 bits (246), Expect = 7e-21 Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 1/187 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K AH + +G K + DTFRA A DQL+ T ++I P Sbjct: 112 GKTTTCTKYAHYHQRKGFKPSLVCADTFRAGAFDQLK--QNATKAKIPFYGSYMESDPVK 169 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + +++ ++E D+++ DTSGR L EE+ + +A+A P+ ++ V+DG+ Sbjct: 170 IAVEGLEKFRQEKSDLIIIDTSGRHMQEAALFEEM----RQVAEATK--PDLVIFVMDGS 223 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QA+ F + I+TKLDG A+GG +S V PV F+G GE ++D Sbjct: 224 IGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDV 283 Query: 550 FDAEAFV 570 F+ E FV Sbjct: 284 FNVEPFV 290
>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 495 Score = 97.4 bits (241), Expect = 3e-20 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K A+ + +G K + DTFRA A DQL+ T ++I P Sbjct: 113 GKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLK--QNATKAKIPFYGSYTESDPVK 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + + V K+E D+++ DTSGR L EE+ + +A+A P+ ++ V+D + Sbjct: 171 IAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEM----RQVAEATK--PDLVIFVMDSS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QA+ F V + I+TK+DG A+GG +S V PV F+G GE +++ + Sbjct: 225 IGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284 Query: 550 FDAEAFVEAI 579 FD + FV + Sbjct: 285 FDVKPFVSRL 294
>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 496 Score = 96.7 bits (239), Expect = 5e-20 Identities = 59/189 (31%), Positives = 97/189 (51%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ K A+ + G K + DTFRA A DQL+ A + + ++ + Sbjct: 113 GKTTTCTKYAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKI 172 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 V+ K+E D+++ DTSGR L EE+ + +++A P+ ++ V+D + Sbjct: 173 AVDGVETFKKENCDLIIVDTSGRHKQEAALFEEM----RQVSEAQK--PDLVIFVMDSSI 226 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QA+ F V + I+TK+DG A+GG +S V PV F+G GE +++ + F Sbjct: 227 GQAAFDQAQAFRQSVAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVF 286 Query: 553 DAEAFVEAI 579 D + FV + Sbjct: 287 DVKPFVSRL 295
>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 499 Score = 96.7 bits (239), Expect = 5e-20 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 1/190 (0%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189 GKTT+ K A+ + +G K + DTFRA A DQL+ T ++I P Sbjct: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLK--QNATKAKIPFYGSYTESDPVK 170 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369 + V+ K+E D+++ DTSGR L EE+ + +A+A P+ ++ V+D + Sbjct: 171 IAVDGVETFKKENCDLIIVDTSGRHKQEAALFEEM----RQVAEATK--PDLVIFVMDSS 224 Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549 G QA+ F V + I+TK+DG A+GG +S V PV F+G GE +++ + Sbjct: 225 IGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284 Query: 550 FDAEAFVEAI 579 FD + FV + Sbjct: 285 FDVKPFVSRL 294
>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)| Length = 444 Score = 95.9 bits (237), Expect = 8e-20 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 4/193 (2%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ GKLA +K +G KV + A D +R AA +QL ++ + + K + Sbjct: 107 GKTTTSGKLALFYKKKGYKVGLVAADIYRPAAYEQLIQIGQQINIPVYGEPGNKNPI-EI 165 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYG----LMEELVSCKKVIAKALPGAPNEILLVL 360 + +++ +E +IV+ DT+GR YG L+EE+ S I P+E++LV+ Sbjct: 166 ATNGLEKFLKEKMNIVIIDTAGR--HGYGEEASLLEEMKSMYDKIH------PDEVILVI 217 Query: 361 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 540 D + G A F+ I I++K+DGTA+GG +S V G +KF+G GE +++ Sbjct: 218 DASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALSAVIATGAQIKFIGTGEKLDE 277 Query: 541 LQPFDAEAFVEAI 579 L+ F+ FV + Sbjct: 278 LEVFNPRRFVSRL 290
>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)| Length = 460 Score = 95.9 bits (237), Expect = 8e-20 Identities = 59/189 (31%), Positives = 101/189 (53%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+ K+A F +G + + DTFR A +Q A+R +E+ + + P Sbjct: 109 GKTTTAAKMAWWFSKKGLRPAIVQTDTFRPGAYEQAAEMADR--AEVDFYGEPDSDDPVQ 166 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 +++ + D+ + DT+GR L+ E+ + V+ P+ LLVLD Sbjct: 167 IARDGLAATADA-DVHIVDTAGRHALEDDLIAEIEEIEGVVE------PDRSLLVLDAAI 219 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552 G QQA++F+ +GI G +TKLDGTA+GG ++ V+E + F+G GE V+D++ F Sbjct: 220 GQGAKQQARQFDASIGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERF 279 Query: 553 DAEAFVEAI 579 + ++F+ + Sbjct: 280 EPDSFISRL 288
>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 621 Score = 91.3 bits (225), Expect = 2e-18 Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 28/217 (12%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAE------------------- 135 GK+T+L KLA KVL+ A DTFR+ A +QL + E Sbjct: 409 GKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRG 468 Query: 136 RTGSEIV----IDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSC 303 +TG++ V + QA+K + + FDIVL DT+GR H + LM L S Sbjct: 469 KTGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSF 528 Query: 304 KKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVG----ITGFILTKLDGTARG-G 468 A P++I++V + G + +QQAK FND G + FI++K D G Sbjct: 529 ------ADQAKPDKIIMVGEALVGTDSVQQAKNFNDAFGKGRNLDFFIISKCDTVGEMLG 582 Query: 469 CVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579 +V++V GIP+ FVGVG+ DL+ + V + Sbjct: 583 TMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTL 619
>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 87.0 bits (214), Expect = 4e-17 Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 2/182 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 GKTT+ KL + + KV++ + D +R AA QL++ +++ N+ Q+P Sbjct: 112 GKTTTTAKLGQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNN--TQSPK 169 Query: 190 -VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 ++ A++ K + +D++L DT+GRL + +M EL+ + P E V D Sbjct: 170 DIVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNI------SHPIETFFVADA 223 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546 G + + EFN + ++ FI+TK D R G ++S+ P+KF+G GE +E+L+ Sbjct: 224 MFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELE 283 Query: 547 PF 552 F Sbjct: 284 LF 285
>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 636 Score = 80.5 bits (197), Expect = 3e-15 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 23/212 (10%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWA---------ERTGSEIVIDN 165 GK+T+L K++ G VL+AA DTFRA A +QL E+ G ++ Sbjct: 428 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQL 487 Query: 166 DKKA---QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336 +K A + +A+ + +GFD+VL DT+GR+ N LM L V Sbjct: 488 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NT 541 Query: 337 PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483 P+ +L V + G + Q +FN + I G +LTK D + G +S+ Sbjct: 542 PDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISM 601 Query: 484 VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579 P+ FVG G+ DL+ +A+A V A+ Sbjct: 602 TYITSKPIVFVGTGQTYCDLRSLNAKAVVAAL 633
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 80.5 bits (197), Expect = 3e-15 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 23/212 (10%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWA---------ERTGSEIVIDN 165 GK+T+L K++ G VL+AA DTFRA A +QL E+ G ++ Sbjct: 430 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQL 489 Query: 166 DKKA---QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336 +K A + +A+ + +GFD+VL DT+GR+ N LM L V Sbjct: 490 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NT 543 Query: 337 PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483 P+ +L V + G + Q +FN + I G +LTK D + G +S+ Sbjct: 544 PDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISM 603 Query: 484 VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579 P+ FVG G+ DL+ +A+A V A+ Sbjct: 604 TYITSKPIVFVGTGQTYCDLRSLNAKAVVAAL 635
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 75.9 bits (185), Expect = 8e-14 Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 23/212 (10%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAER----------TGSEIV-- 156 GK+T+L K++ G VL+AA DTFRA A + + R G +V Sbjct: 430 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQL 489 Query: 157 IDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336 + A + +A+ + +GFD+VL DT+GR+ N LM L V Sbjct: 490 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NT 543 Query: 337 PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483 P+ +L V + G + Q +FN + I G +LTK D + G +S+ Sbjct: 544 PDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISM 603 Query: 484 VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579 P+ FVG G+ DL+ +A+A V A+ Sbjct: 604 TYITSKPIVFVGTGQTYCDLRSLNAKAVVAAL 635
>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) (GTP-binding protein) Length = 614 Score = 70.9 bits (172), Expect = 3e-12 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 23/212 (10%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIW----------AERTGSEIV-- 156 GK+T+L K+ VL+AA DTFRA A +QL A+ G +V Sbjct: 407 GKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQL 466 Query: 157 IDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336 + A + +A+K D+VL DT+GR+ N LM L KV Sbjct: 467 YEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKV------NN 520 Query: 337 PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483 P+ +L V + G + Q +FN + I G +LTK D + G +S+ Sbjct: 521 PDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISM 580 Query: 484 VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579 G P+ FVG G+ DL+ + A V ++ Sbjct: 581 TYITGQPIVFVGTGQTYADLKAINVNAVVNSL 612
>FLHF_AQUAE (O67266) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 373 Score = 63.5 bits (153), Expect = 4e-10 Identities = 52/176 (29%), Positives = 86/176 (48%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192 GKTT+L KLAH FK KV + + D FR A +QL+ +A E++ K A +P Sbjct: 184 GKTTTLAKLAHLFKKNKKKVGIISLDCFRVGAFEQLKAFA-----EVLEVPFKLADSPRA 238 Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372 + ++ + + D++L DT+GR H + ++EL + KV + + L L Sbjct: 239 FN--IQLLEMDDRDVILVDTAGRSHYDVIRLKELETYFKV-------SDISVYLTLAANL 289 Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 540 ++ +A + I+G I TKLD T G +V+V PV +G+ + + Sbjct: 290 SELVMYEAIMQFGMFSISGLIFTKLDETPYPGSMVNVAYRTQYPVVCFTMGQSIPE 345
>FLHF_HELPJ (Q9ZM34) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 455 Score = 56.6 bits (135), Expect = 5e-08 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 4/193 (2%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAK---VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQA 183 GKTT+L KLA R+ AK V + D +R A +QL +A + I D K A Sbjct: 264 GKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVIDAKDFA 323 Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 363 + + E D +L DT+G H+ Y E++ K+ I G ++ LVL Sbjct: 324 KEIEAL-------EYCDFILVDTTG--HSQYD-KEKIAGLKEFIDG---GYNIDVSLVLS 370 Query: 364 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE-D 540 TT ++ + V+GI I TKLD + G + S+V E P+ ++ VG+ V D Sbjct: 371 VTTKYEDMKDIYDSFGVLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMD 430 Query: 541 LQPFDAEAFVEAI 579 L+ E V+ + Sbjct: 431 LKVATNEYLVDCM 443
>FLHF_HELPY (O25679) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 459 Score = 56.6 bits (135), Expect = 5e-08 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 4/193 (2%) Frame = +1 Query: 13 GKTTSLGKLAHRFKNEGAK---VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQA 183 GKTT+L KLA R+ AK V + D +R A +QL +A + I D K A Sbjct: 268 GKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVIDAKDFA 327 Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 363 + + E D +L DT+G H+ Y E++ K+ I G ++ LVL Sbjct: 328 KEIEAL-------EYCDFILVDTTG--HSQYD-KEKIAGLKEFIDG---GYNIDVSLVLS 374 Query: 364 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE-D 540 TT ++ + V+GI I TKLD + G + S+V E P+ ++ VG+ V D Sbjct: 375 VTTKYEDMKDIYDSFGVLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMD 434 Query: 541 LQPFDAEAFVEAI 579 L+ E V+ + Sbjct: 435 LKVATNEYLVDCM 447
>FLHF_BACSU (Q01960) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 366 Score = 55.5 bits (132), Expect = 1e-07 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 13 GKTTSLGKLAH-RFKNEGAKVLMAAGDTFRAAARDQLEIWAE--RTGSEIVIDNDKKAQA 183 GKTT+L KLA + K+ DT+R AA +QL+ +AE + E+ ++ QA Sbjct: 187 GKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPLEVCYTKEEFQQA 246 Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPN-EILLVL 360 + S+ +D V DT+GR + ++EL + +P + + LVL Sbjct: 247 KELFSE---------YDHVFVDTAGRNFKDPQYIDEL-------KETIPFESSIQSFLVL 290 Query: 361 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV-E 537 T ++ + V + +I TK+D T G V +++ E I V F+ G+ V E Sbjct: 291 SATAKYEDMKHIVKRFSSVPVNQYIFTKIDETTSLGSVFNILAESKIGVGFMTNGQNVPE 350 Query: 538 DLQPFDAEAFVEAI 579 D+Q FV + Sbjct: 351 DIQTVSPLGFVRML 364
>FLHF_CAMJE (O52908) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 484 Score = 53.5 bits (127), Expect = 4e-07 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 3/192 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRFK--NEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP 186 GKTT+L KLA R+ ++ K + DT+R A +QL +A+ I+ + P Sbjct: 294 GKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQYAKMMKLPIIDSIE-----P 348 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 L +A+K +++L DT G + +L K+ + + A ++ LV+ Sbjct: 349 KDLDEAIK--SLNNCEVILVDTIGNSQYD---QSKLAKTKEFLMHS--NAEIDVNLVVSA 401 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV-EDL 543 T L + + + I I+TK D T G + S+V E IP+ F +G+ V +DL Sbjct: 402 NTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSFFSIGQEVPDDL 461 Query: 544 QPFDAEAFVEAI 579 + +++ V I Sbjct: 462 EVANSDFLVHCI 473
>FLHF_TREPA (Q56339) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 437 Score = 52.8 bits (125), Expect = 8e-07 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 7/181 (3%) Frame = +1 Query: 13 GKTTSLGKLAHRF-----KNEGA--KVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDK 171 GKTT+L KLA + K G +V + D FR A Q+E + E G ++ + Sbjct: 229 GKTTTLAKLAAFYFVTEPKRTGIQPRVKIITTDNFRIGAAFQMERYCELMGLDLCV---- 284 Query: 172 KAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEIL 351 QAP + ++E D+V DT GR + +E +V +A+ E+ Sbjct: 285 -VQAPVEFLTYMTLYQQE-TDVVFVDTEGRSPVDGQNIERMVE----YFRAVKNFELEVY 338 Query: 352 LVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEG 531 L +D + N L++ + + I+TKLD T G ++S + E P+ ++ G+ Sbjct: 339 LTIDAGSKANDLREVFKQYALFEYRALIVTKLDETTSIGNLISALSEARTPITYITTGQT 398 Query: 532 V 534 V Sbjct: 399 V 399
>FLHF_PSEPU (O52256) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 437 Score = 51.2 bits (121), Expect = 2e-06 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 2/178 (1%) Frame = +1 Query: 13 GKTTSLGKLAHRF--KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP 186 GKTT+L KLA R+ K + + + D+FR A++QL+ + + ++ A Sbjct: 230 GKTTTLAKLAARYVLKYGAQNLALVSMDSFRIGAQEQLKTLGRILNVPVTYVDPGQSLAA 289 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366 ++ KR +VL DT+G ++ L +L + A G + LVL Sbjct: 290 ALEPLLRKR-------VVLIDTAGLQASDPALRMQLETL------AGRGIAAKNYLVLAT 336 Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 540 T+ +L A G+ G ILTKLD TA G V+S+ +PV ++ G + D Sbjct: 337 TSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGDVLSLAISHELPVAYLTDGPRIPD 394
>VIRC1_AGRTU (P06665) Protein virC1| Length = 231 Score = 33.9 bits (76), Expect = 0.36 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 3/88 (3%) Frame = +1 Query: 4 GTRGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVID---NDKK 174 G GKTT+L L N+G +V + D R R W E D Sbjct: 11 GGAGKTTALMGLCAALANDGKRVALFDADENRPLTR-----WRENALQSSTWDPRCEVYS 65 Query: 175 AQAPSVLSQAVKRGKREGFDIVLCDTSG 258 A +L A + + EGFD L DT G Sbjct: 66 ADEMPLLEAAYENAELEGFDYALADTRG 93
>HIS6_METMA (Q8PW92) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 273 Score = 32.3 bits (72), Expect = 1.1 Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 28/186 (15%) Frame = +1 Query: 34 KLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKR 213 +LA R+ +GA L+ T A R+ + ERT E+ I S+ +A+++ Sbjct: 38 ELAKRYNEDGADELVFLDITASAHGRETMIDVIERTADEVFIPLTVGGGISSI--EAIRQ 95 Query: 214 GKREGFDIVLCDTSGRLHTNY----------GLMEELVSCK----------KVIAKALPG 333 R G D V +TS + + + + CK K I + G Sbjct: 96 ILRAGADKVSVNTSAVKNPEFIKESSDIFGAQCIVTAIDCKRNTNVKDNPDKTILELEDG 155 Query: 334 APNEILLVLDG---TTGLNMLQQAKEFNDVVGITGFILTKL--DGTARGGCVV---SVVD 489 P +V+ G TG++ +Q AK + +G +LT + DGT G + + + Sbjct: 156 TPAWYEVVIYGGRKNTGIDAVQWAKRAEE-LGSGEILLTSMDRDGTCAGYDIPITRKLSE 214 Query: 490 ELGIPV 507 EL IP+ Sbjct: 215 ELDIPI 220
>ENGA_AQUAE (O67749) GTP-binding protein engA| Length = 433 Score = 32.0 bits (71), Expect = 1.4 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%) Frame = +1 Query: 226 GFDIVLCDTSGRL-HTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQ--A 396 G + ++ DT G + T L+ E+ KKV+ + +P A + IL V+DG GLN L Q A Sbjct: 49 GKEFIIVDTGGLVPETKDELIREV---KKVVEQEIPKA-DVILFVVDGKEGLNPLDQEIA 104 Query: 397 KEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKF-------VGVGEGVEDLQPFD 555 K ++ K+D + V LG F GVGE ++++ + Sbjct: 105 KYLYPYADKVLLVVNKIDNLRQEKNVAEFY-TLGFEKIFPISAQHGKGVGELLDEVVKYL 163 Query: 556 AEAFVEAI 579 E VE + Sbjct: 164 KEEKVETV 171
>JHD3C_HUMAN (Q9H3R0) JmjC domain-containing histone demethylation protein 3C| (EC 1.14.11.-) (Jumonji domain-containing protein 2C) (Gene amplified in squamous cell carcinoma 1 protein) (GASC-1 protein) Length = 1056 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = +3 Query: 408 RCCWNHRIHSD----EARRHCSWWLCGERRRRTWNSSQVCWCRRRGG 536 +CC R+H+ + C WLC +R W +++ C C RGG Sbjct: 720 KCCV--RVHASCYGIPSHEICDGWLCARCKRNAW-TAECCLCNLRGG 763
>LPXK_XANOR (Q5H0H1) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 346 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/66 (28%), Positives = 33/66 (50%) Frame = +1 Query: 52 KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGF 231 ++E K DT A D+ + A +TG+ + +D+D+ A A +++ G Sbjct: 95 RDEAGKARWVEADTPVALGGDEPVLIAWKTGARVRVDSDRLAAARALV--------EAGC 146 Query: 232 DIVLCD 249 DIV+CD Sbjct: 147 DIVICD 152
>LPXK_XANOM (Q2P3E8) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 346 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/66 (28%), Positives = 33/66 (50%) Frame = +1 Query: 52 KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGF 231 ++E K DT A D+ + A +TG+ + +D+D+ A A +++ G Sbjct: 95 RDEAGKARWVEADTPVALGGDEPVLIAWKTGARVRVDSDRLAAARALV--------EAGC 146 Query: 232 DIVLCD 249 DIV+CD Sbjct: 147 DIVICD 152
>URAA_PASMU (Q9CPL9) Probable uracil permease (Uracil transporter)| Length = 417 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +1 Query: 412 VVGITGFILTKLDGT-ARGGCVVSVVDELGIPVKFVGVGE 528 VVG++ I K+D T AR C++SVV GI FV GE Sbjct: 346 VVGMSTLIRGKVDVTEARNLCIISVVMTFGIGGMFVNFGE 385
>JHD3C_MOUSE (Q8VCD7) JmjC domain-containing histone demethylation protein 3C| (EC 1.14.11.-) (Jumonji domain-containing protein 2C) Length = 1054 Score = 30.8 bits (68), Expect = 3.1 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 456 CSWWLCGERRRRTWNSSQVCWCRRRGG 536 C WLC +R W +++ C C RGG Sbjct: 736 CDGWLCARCKRNAW-TAECCLCNLRGG 761
>Y830_CORDI (Q6NIE7) Hypothetical transport protein DIP0830| Length = 541 Score = 30.8 bits (68), Expect = 3.1 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 5/117 (4%) Frame = +1 Query: 4 GTRGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQA 183 G G ++G A F+ + + AG Q+++ TGS++VID Sbjct: 166 GVLGVIAAIGLCAKWFRIDHVQEAHDAGVAVEDLFTRQIKVNHVVTGSDLVIDIHHTLGL 225 Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTN-----YGLMEELVSCKKVIAKALPGAP 339 ++S+ + G++ L S R+H G EEL V+ LPG P Sbjct: 226 EIIVSRIERDGQQ-----TLPTASSRIHMGDVLSVVGTAEELDKAAHVLGDLLPGDP 277
>RPC1A_CHLRE (Q8HUG9) DNA-directed RNA polymerase beta' chain N-terminal subunit| (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' N-terminal section) (RNA polymerase beta' N-terminal section) Length = 603 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +1 Query: 1 FGTRG--KTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERT 141 FGT+ T + K+ H+F+N +K+ T A+ +++ WAE+T Sbjct: 193 FGTKNIVNTLQIKKIVHKFENSYSKLTEINLITINLASANRIRQWAEKT 241
>URAA_HAEIN (P45117) Probable uracil permease (Uracil transporter)| Length = 414 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +1 Query: 412 VVGITGFILTKLDGT-ARGGCVVSVVDELGIPVKFVGVG 525 VVG++ I K+D T AR C++SVV GI FV VG Sbjct: 347 VVGMSTLIRGKVDVTEARNLCIISVVMTFGIGNMFVDVG 385
>HSP75_KLUDE (Q707W3) Heat shock protein SSB| Length = 612 Score = 30.4 bits (67), Expect = 4.0 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 4/98 (4%) Frame = +1 Query: 46 RFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKRE 225 R +E + ++ + F+AA + + E + + ++ VLS +KRG + Sbjct: 512 RLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKT 571 Query: 226 GFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327 + L D L G EE V K+V+ KA+ Sbjct: 572 KIEAALADALAALQIEDGSTEEYRKAEVGLKRVVTKAM 609
>HSP75_CANGA (Q876N3) Heat shock protein SSB| Length = 612 Score = 30.4 bits (67), Expect = 4.0 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 4/98 (4%) Frame = +1 Query: 46 RFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKRE 225 R +E + ++ + F+AA + + E + + ++ VLS +KRG + Sbjct: 512 RLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKT 571 Query: 226 GFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327 + L D L G EE V K+V+ KA+ Sbjct: 572 KIEAALADALSALQIEDGSAEEYRKAEVGLKRVVTKAM 609
>HIS6_METAC (Q8TT96) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 273 Score = 30.4 bits (67), Expect = 4.0 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 28/186 (15%) Frame = +1 Query: 34 KLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKR 213 +LA R+ +GA L+ T A R+ + ERT E+ I S+ A+++ Sbjct: 38 ELAKRYNEDGADELVFLDITASAHGRETMIDVIERTADEVFIPLTVGGGISSI--DAIRQ 95 Query: 214 GKREGFDIVLCDTSGRLHTNY----------GLMEELVSCK----------KVIAKALPG 333 R G D V +TS + ++ + + C+ K + + G Sbjct: 96 ILRAGADKVSVNTSAVKNPDFIKESSDIFGAQCIVTAIDCRRNTDIKNNPDKTVLELEDG 155 Query: 334 APNEILLVLDG---TTGLNMLQQAKEFNDVVGITGFILTKL--DGTARG---GCVVSVVD 489 P +V+ G TG++ +Q AK+ + +G +LT + DGT G + + Sbjct: 156 TPAWYEVVIYGGREATGIDAVQWAKKAEE-LGSGEILLTSMDRDGTCAGYDLPITRKLSE 214 Query: 490 ELGIPV 507 EL IP+ Sbjct: 215 ELDIPI 220
>ISPG_XYLFA (Q9PAE3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 417 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = +1 Query: 100 AAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTN-Y 276 A+ + E+W R GSE+V AQ+ + + + +R G D+ L G H N + Sbjct: 49 ASTKQVAELW--RAGSEMVRLTVNNAQSAAAIPRIAERLAMMGIDVPLI---GDFHYNGH 103 Query: 277 GLMEELVSCKKVIAK 321 L+ + +C +V+AK Sbjct: 104 QLLADEPACAEVLAK 118
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = -1 Query: 350 KISLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 204 K S+G AM FLQE NS + FV P+ + ++PS F RFT Sbjct: 78 KCSIGKNRAQAAMEFLQELNSDVSGSFVEESPE--NLLDNDPSFFCRFT 124
>HIS6_METBF (Q46CC5) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 273 Score = 29.6 bits (65), Expect = 6.9 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 28/186 (15%) Frame = +1 Query: 34 KLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKR 213 +LA R+ EGA L+ T A R + ERT E+ I S+ A+++ Sbjct: 38 ELAKRYNEEGADELVFLDITASAQGRKTMIDVIERTADEVFIPLTIGGGINSI--DAIRQ 95 Query: 214 GKREGFDIVLCDTSGRLHTNY----------GLMEELVSCK----------KVIAKALPG 333 R G D V +TS + ++ + + C+ K I + G Sbjct: 96 ILRAGADKVSVNTSAVKNPDFIKESSDIFGAQCIVTAIDCRRNTDIKNNPDKTILELEDG 155 Query: 334 APNEILLVLDG---TTGLNMLQQAKEFNDVVGITGFILTKL--DGTARG---GCVVSVVD 489 P +V+ G TG++ +Q A++ + +G +LT + DGT G + + Sbjct: 156 TPAWYEVVIYGGREATGIDAVQWARKAEE-LGSGEILLTSMDRDGTCAGYDLPITKKLSE 214 Query: 490 ELGIPV 507 EL IP+ Sbjct: 215 ELDIPI 220
>ILVD_PYRAE (Q8ZYU6) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 562 Score = 29.6 bits (65), Expect = 6.9 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%) Frame = +1 Query: 40 AHRFKNEG-AKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS------VLS 198 A R K EG AKV + + F+A A ++ + G +VI + AP + + Sbjct: 400 AERLKFEGRAKVYDSEAEAFKAVASGEI-----KAGDVVVIRYEGPKGAPGMPEMLKITA 454 Query: 199 QAVKRGKREGFDIVLCDTSGRLH-TNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTG 375 V G E +V T GR G+M VS + + + N +V+DG G Sbjct: 455 AIVGAGLGE---VVALITDGRFSGATRGIMVGHVSPEAAVGGPIALVQNGDRIVIDGEAG 511 Query: 376 LNMLQQAKE 402 L L+ +E Sbjct: 512 LLKLELGEE 520
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = -1 Query: 350 KISLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 204 K S+G AM FLQE NS + FV P+ + ++PS F RFT Sbjct: 78 KSSIGKNRAQAAMEFLQELNSDVSGSFVEESPE--NLLDNDPSFFCRFT 124
>METN_HAEIN (P44785) Probable D-methionine transport ATP-binding protein metN| Length = 345 Score = 29.3 bits (64), Expect = 9.0 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%) Frame = +1 Query: 313 IAKALPGAPNEILL-----VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVV 477 IA+AL P +L LD T ++L+ KE N +GIT ++T + C Sbjct: 151 IARALASDPKVLLCDEATSALDPATTQSILKLLKEINRTLGITILLITHEMEVVKQICDQ 210 Query: 478 SVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 582 V + G V+ VGE + + A+ F+ + F Sbjct: 211 VAVIDQGRLVEQGTVGEIFANPKTELAQEFIRSTF 245
>PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)| Length = 607 Score = 29.3 bits (64), Expect = 9.0 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +1 Query: 406 NDVVGITGF-ILTKLDGTARGGCVVSVVDELGIPVKFVGVGEG--VEDL 543 +D+ T F I T + G A V V + LGI +K V +GEG V+DL Sbjct: 503 HDIAEGTRFTIFTGITGQAWADAAVRVAERLGIDLKAVVIGEGQPVQDL 551
>GAL1_CLOPE (Q8XKP9) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 387 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = +1 Query: 427 GFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579 G + ++ G GGC +++V+ + VG+ +D ++A +V +I Sbjct: 330 GVLGARMTGAGFGGCAIAIVNNAHVDEFIKNVGQAYKDAIGYEASFYVASI 380
>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit| (Auxin-resistance protein AXR1) Length = 540 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -1 Query: 344 SLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 204 S+G FLQE N S+ F+ PD T NPS F +FT Sbjct: 91 SVGQSKAKSVCAFLQELNDSVNAKFIEENPDTLITT--NPSFFSQFT 135
>RSC30_YEAST (P38781) Chromatin structure remodeling complex protein RSC30| (Remodel the structure of chromatin complex subunit 30) Length = 883 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = -2 Query: 343 H*EHQAGL*L*LSCKKPTLPSDRNLYEVVLTYHIEQYQILHASHVLLPAKELMEPVPS 170 H +H++ L LSC D L+ + + ++ +L S ++PA E + P+P+ Sbjct: 485 HDDHKSSLDEDLSCLLSFQIKDFKLFHFLKKMYYSRHSLLGQSSFMVPAAENLSPIPA 542
>HSP76_YEAST (P40150) Heat shock protein SSB2| Length = 612 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 4/110 (3%) Frame = +1 Query: 10 RGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 + ++ R +E + ++ + F+AA + R E + + ++ Sbjct: 500 KSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDP 559 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327 VLS +KRG + + L D L +EL V K+V+ KA+ Sbjct: 560 VLSSKLKRGSKSKIEAALSDALAALQIEDPSADELRKAEVGLKRVVTKAM 609
>HSP75_YEAST (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101)| Length = 612 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 4/110 (3%) Frame = +1 Query: 10 RGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189 + ++ R +E + ++ + F+AA + R E + + ++ Sbjct: 500 KSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDP 559 Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327 VLS +KRG + + L D L +EL V K+V+ KA+ Sbjct: 560 VLSSKLKRGSKSKIEAALSDALAALQIEDPSADELRKAEVGLKRVVTKAM 609
>HSP75_ASHGO (Q75E44) Heat shock protein SSB| Length = 612 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 6/111 (5%) Frame = +1 Query: 13 GKTTSL--GKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP 186 GKT ++ R +E + +++ + F+AA + R E + + ++ + Sbjct: 499 GKTANITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSD 558 Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327 VLS +K+G + + L D L E+ + K+V+ KA+ Sbjct: 559 PVLSAKMKKGAKSKVEAALADAFSALQIEESSAEDYRKAEIGLKRVVTKAM 609
>MURD_THETN (Q8R9G4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 450 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +1 Query: 4 GTRGKTTSLGKLAHRFKNEGAKVLMA 81 GT GKTT+ L F+N G KV +A Sbjct: 115 GTNGKTTTTSLLGEMFRNAGRKVYVA 140 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,978,697 Number of Sequences: 219361 Number of extensions: 1726870 Number of successful extensions: 5590 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 5299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5421 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
