ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2o05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FTSY_AQUAE (O67066) Cell division protein ftsY homolog 212 6e-55
2FTSY_NEIMC (O30391) Cell division protein ftsY homolog 199 5e-51
3FTSY_NEIMB (P57011) Cell division protein ftsY homolog 199 5e-51
4FTSY_NEIMA (P57010) Cell division protein ftsY homolog 199 5e-51
5FTSY_BACSU (P51835) Cell division protein ftsY homolog 198 1e-50
6FTSY_THEAQ (P83749) Cell division protein ftsY 192 5e-49
7FTSY_NEIGO (P14929) Cell division protein ftsY homolog 190 2e-48
8FTSY_ECOLI (P10121) Cell division protein ftsY 189 4e-48
9FTSY_MYCHO (O32861) Cell division protein ftsY homolog 187 2e-47
10FTSY_HAEIN (P44870) Cell division protein ftsY homolog 181 1e-45
11FTSY_MYCTU (P66842) Cell division protein ftsY homolog 181 1e-45
12FTSY_MYCBO (P66843) Cell division protein ftsY homolog 181 1e-45
13FTSY_MYCLE (O33010) Cell division protein ftsY homolog 180 3e-45
14FTSY_MYCPN (P75362) Cell division protein ftsY homolog 171 1e-42
15FTSY_MYCGE (P47539) Cell division protein ftsY homolog 169 7e-42
16FTSY_SYNY3 (P73930) Cell division protein ftsY homolog 167 3e-41
17FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog 163 4e-40
18FTSY_BUCAI (P57137) Cell division protein ftsY homolog 157 2e-38
19FTSY_RICPR (O05948) Cell division protein ftsY homolog 156 4e-38
20FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog 152 9e-37
21Y291_METJA (Q57739) Probable signal recognition particle protein... 143 3e-34
22SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-... 143 3e-34
23FTSY_HELPY (O25458) Cell division protein ftsY homolog 143 4e-34
24FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog 142 9e-34
25SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein,... 132 6e-31
26SRP54_SYNP7 (Q55311) Signal sequence-binding protein 132 6e-31
27SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54) 132 1e-30
28SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-... 131 2e-30
29SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-... 130 3e-30
30SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-... 130 4e-30
31SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-... 129 8e-30
32SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54) 127 3e-29
33SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54) 126 4e-29
34SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-... 126 5e-29
35DOCK_SULAC (P27414) Probable signal recognition particle protein... 125 7e-29
36SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-... 125 1e-28
37SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-... 124 2e-28
38SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-... 124 2e-28
39SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-... 124 2e-28
40SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-... 122 6e-28
41SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54) 122 6e-28
42SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54) 122 1e-27
43SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein ... 122 1e-27
44SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-... 121 1e-27
45SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54) 121 2e-27
46SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-... 120 4e-27
47SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-... 119 9e-27
48SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54) 119 9e-27
49SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54) 118 1e-26
50SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-... 118 1e-26
51SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-... 118 1e-26
52SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein ... 118 1e-26
53SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54) 117 2e-26
54SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54) 117 3e-26
55SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein ... 115 7e-26
56SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein ... 115 1e-25
57SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (S... 114 2e-25
58SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein ... 114 2e-25
59SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein ... 114 2e-25
60SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein ... 114 2e-25
61SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein ... 114 2e-25
62SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54) 113 4e-25
63SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-... 111 1e-24
64SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-... 111 2e-24
65SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-... 111 2e-24
66SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54) 110 2e-24
67SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (... 110 3e-24
68SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-... 109 7e-24
69SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-... 109 7e-24
70SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54) 106 4e-23
71SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54) 106 6e-23
72SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54) 106 6e-23
73SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein ... 105 1e-22
74SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein ... 104 2e-22
75SR542_ARATH (P49966) Signal recognition particle 54 kDa protein ... 104 2e-22
76SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein ... 103 5e-22
77SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54) 101 1e-21
78SR541_ARATH (P37106) Signal recognition particle 54 kDa protein ... 101 2e-21
79SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54) 100 2e-21
80SR542_HORVU (P49969) Signal recognition particle 54 kDa protein ... 100 5e-21
81SR541_HORVU (P49968) Signal recognition particle 54 kDa protein ... 100 5e-21
82SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein ... 100 5e-21
83SR543_HORVU (P49970) Signal recognition particle 54 kDa protein ... 99 7e-21
84SR543_ARATH (P49967) Signal recognition particle 54 kDa protein ... 97 3e-20
85SR541_LYCES (P49971) Signal recognition particle 54 kDa protein ... 97 5e-20
86SR542_LYCES (P49972) Signal recognition particle 54 kDa protein ... 97 5e-20
87SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54) 96 8e-20
88SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54) 96 8e-20
89SRPR_YEAST (P32916) Signal recognition particle receptor alpha s... 91 2e-18
90SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-... 87 4e-17
91SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha s... 80 3e-15
92SRPR_HUMAN (P08240) Signal recognition particle receptor alpha s... 80 3e-15
93SRPR_CANFA (P06625) Signal recognition particle receptor alpha s... 76 8e-14
94SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha s... 71 3e-12
95FLHF_AQUAE (O67266) Flagellar biosynthesis protein flhF (Flagell... 64 4e-10
96FLHF_HELPJ (Q9ZM34) Flagellar biosynthesis protein flhF (Flagell... 57 5e-08
97FLHF_HELPY (O25679) Flagellar biosynthesis protein flhF (Flagell... 57 5e-08
98FLHF_BACSU (Q01960) Flagellar biosynthesis protein flhF (Flagell... 55 1e-07
99FLHF_CAMJE (O52908) Flagellar biosynthesis protein flhF (Flagell... 54 4e-07
100FLHF_TREPA (Q56339) Flagellar biosynthesis protein flhF (Flagell... 53 8e-07
101FLHF_PSEPU (O52256) Flagellar biosynthesis protein flhF (Flagell... 51 2e-06
102VIRC1_AGRTU (P06665) Protein virC1 34 0.36
103HIS6_METMA (Q8PW92) Imidazole glycerol phosphate synthase subuni... 32 1.1
104ENGA_AQUAE (O67749) GTP-binding protein engA 32 1.4
105JHD3C_HUMAN (Q9H3R0) JmjC domain-containing histone demethylatio... 32 1.4
106LPXK_XANOR (Q5H0H1) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.13... 32 1.8
107LPXK_XANOM (Q2P3E8) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.13... 32 1.8
108URAA_PASMU (Q9CPL9) Probable uracil permease (Uracil transporter) 31 3.1
109JHD3C_MOUSE (Q8VCD7) JmjC domain-containing histone demethylatio... 31 3.1
110Y830_CORDI (Q6NIE7) Hypothetical transport protein DIP0830 31 3.1
111RPC1A_CHLRE (Q8HUG9) DNA-directed RNA polymerase beta' chain N-t... 30 4.0
112URAA_HAEIN (P45117) Probable uracil permease (Uracil transporter) 30 4.0
113HSP75_KLUDE (Q707W3) Heat shock protein SSB 30 4.0
114HSP75_CANGA (Q876N3) Heat shock protein SSB 30 4.0
115HIS6_METAC (Q8TT96) Imidazole glycerol phosphate synthase subuni... 30 4.0
116ISPG_XYLFA (Q9PAE3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 30 5.3
117ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit ... 30 5.3
118HIS6_METBF (Q46CC5) Imidazole glycerol phosphate synthase subuni... 30 6.9
119ILVD_PYRAE (Q8ZYU6) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) 30 6.9
120ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subuni... 30 6.9
121METN_HAEIN (P44785) Probable D-methionine transport ATP-binding ... 29 9.0
122PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Pheno... 29 9.0
123GAL1_CLOPE (Q8XKP9) Galactokinase (EC 2.7.1.6) (Galactose kinase) 29 9.0
124ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subuni... 29 9.0
125RSC30_YEAST (P38781) Chromatin structure remodeling complex prot... 29 9.0
126HSP76_YEAST (P40150) Heat shock protein SSB2 29 9.0
127HSP75_YEAST (P11484) Heat shock protein SSB1 (Cold-inducible pro... 29 9.0
128HSP75_ASHGO (Q75E44) Heat shock protein SSB 29 9.0
129MURD_THETN (Q8R9G4) UDP-N-acetylmuramoylalanine--D-glutamate lig... 29 9.0

>FTSY_AQUAE (O67066) Cell division protein ftsY homolog|
          Length = 461

 Score =  212 bits (540), Expect = 6e-55
 Identities = 105/189 (55%), Positives = 143/189 (75%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLAH+ K +G KVL+ AGDTFRAAA +QLE+WA+R G +IV   ++ +   +V
Sbjct: 272 GKTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIV-KKEEGSDPGAV 330

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           + + +K+ K EG+++VL DT+GRLHT   L+ EL   KKVI K     P+E LLV+D TT
Sbjct: 331 VYEGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATT 390

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N +QQAK F + V ITG ++TKLDG+A+GG VV++  EL IP+K VGVGEG++DLQPF
Sbjct: 391 GQNAIQQAKVFKEAVDITGIVVTKLDGSAKGGAVVAICRELKIPIKLVGVGEGIDDLQPF 450

Query: 553 DAEAFVEAI 579
           DA+A+VEA+
Sbjct: 451 DADAYVEAL 459



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>FTSY_NEIMC (O30391) Cell division protein ftsY homolog|
          Length = 421

 Score =  199 bits (506), Expect = 5e-51
 Identities = 96/189 (50%), Positives = 136/189 (71%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS+GKLA  F+ +G  VL+AAGDTFRAAAR+QL+ W ER  + + + +     + +V
Sbjct: 233 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGER--NNVTVISQTTGDSAAV 290

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV+  K  G DIVL DT+GRL T   LMEE+   K+V+ KA+P AP+EI++VLD   
Sbjct: 291 CFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANI 350

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + Q K F+D +G+TG I+TKLDGTA+GG + ++  +  +PV+++GVGEG++DL+PF
Sbjct: 351 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 410

Query: 553 DAEAFVEAI 579
           DA AFV+A+
Sbjct: 411 DARAFVDAL 419



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>FTSY_NEIMB (P57011) Cell division protein ftsY homolog|
          Length = 421

 Score =  199 bits (506), Expect = 5e-51
 Identities = 96/189 (50%), Positives = 136/189 (71%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS+GKLA  F+ +G  VL+AAGDTFRAAAR+QL+ W ER  + + + +     + +V
Sbjct: 233 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGER--NNVTVISQTTGDSAAV 290

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV+  K  G DIVL DT+GRL T   LMEE+   K+V+ KA+P AP+EI++VLD   
Sbjct: 291 CFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANI 350

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + Q K F+D +G+TG I+TKLDGTA+GG + ++  +  +PV+++GVGEG++DL+PF
Sbjct: 351 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 410

Query: 553 DAEAFVEAI 579
           DA AFV+A+
Sbjct: 411 DARAFVDAL 419



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>FTSY_NEIMA (P57010) Cell division protein ftsY homolog|
          Length = 421

 Score =  199 bits (506), Expect = 5e-51
 Identities = 96/189 (50%), Positives = 136/189 (71%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS+GKLA  F+ +G  VL+AAGDTFRAAAR+QL+ W ER  + + + +     + +V
Sbjct: 233 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGER--NNVTVISQTTGDSAAV 290

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV+  K  G DIVL DT+GRL T   LMEE+   K+V+ KA+P AP+EI++VLD   
Sbjct: 291 CFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANI 350

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + Q K F+D +G+TG I+TKLDGTA+GG + ++  +  +PV+++GVGEG++DL+PF
Sbjct: 351 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 410

Query: 553 DAEAFVEAI 579
           DA AFV+A+
Sbjct: 411 DARAFVDAL 419



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>FTSY_BACSU (P51835) Cell division protein ftsY homolog|
          Length = 329

 Score =  198 bits (503), Expect = 1e-50
 Identities = 99/190 (52%), Positives = 132/190 (69%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLAH+ K EG  V++AAGDTFRA A +QLE+W ERTG   VI     +   +V
Sbjct: 132 GKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVP-VIKQTAGSDPAAV 190

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  AV   K    D+++CDT+GRL     LM+EL   K+VI + +P AP+E+LL LD TT
Sbjct: 191 IYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHEVLLALDATT 250

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + QAKEF+    +TG  LTKLDGTA+GG V+++ +EL IPVK VG+GE V+DLQ F
Sbjct: 251 GQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEF 310

Query: 553 DAEAFVEAIF 582
           D E++V  +F
Sbjct: 311 DPESYVYGLF 320



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>FTSY_THEAQ (P83749) Cell division protein ftsY|
          Length = 303

 Score =  192 bits (489), Expect = 5e-49
 Identities = 99/189 (52%), Positives = 130/189 (68%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KL   ++N G KV+  AGDTFRAA   QL  W +R  S  VI   +     ++
Sbjct: 113 GKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRL-SIPVIQGPEGTDPAAL 171

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV+  K  G+D++  DT+GRLHT + LMEEL   K+ IAKA P  P E+ LVLD  T
Sbjct: 172 AYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVT 231

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N L+QAK+F++ VG+TG I+TKLDGTA+GG ++ +V  L +P+KFVGVGEG +DLQPF
Sbjct: 232 GQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPF 291

Query: 553 DAEAFVEAI 579
           D EAFVEA+
Sbjct: 292 DPEAFVEAL 300



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>FTSY_NEIGO (P14929) Cell division protein ftsY homolog|
          Length = 416

 Score =  190 bits (483), Expect = 2e-48
 Identities = 94/189 (49%), Positives = 134/189 (70%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS+GKLA  F+ +G  VL+AAGDTFRAAAR+QL+ W  R  + + + +     + +V
Sbjct: 229 GKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGR--NNVTVISQTTGDSAAV 286

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV+  K    DIVL DT+GRL T   LMEE+   K+V+ KA+PGAP+EI++VLD   
Sbjct: 287 CFDAVQAAKAR-IDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLDANI 345

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + Q K F+D +G+TG I+TKLDGTA+GG + ++  +  +PV+++GVGEG++DL+PF
Sbjct: 346 GQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPF 405

Query: 553 DAEAFVEAI 579
           DA AFV+ +
Sbjct: 406 DARAFVDRL 414



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>FTSY_ECOLI (P10121) Cell division protein ftsY|
          Length = 497

 Score =  189 bits (481), Expect = 4e-48
 Identities = 89/190 (46%), Positives = 134/190 (70%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLA +F+ +G  V++AAGDTFRAAA +QL++W +R    ++  +   A + SV
Sbjct: 305 GKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTG-ADSASV 363

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  A++  K    D+++ DT+GRL     LMEEL    +V+ K    AP+E++L +D +T
Sbjct: 364 IFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAST 423

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + QAK F++ VG+TG  LTKLDGTA+GG + SV D+ GIP++++GVGE +EDL+PF
Sbjct: 424 GQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPF 483

Query: 553 DAEAFVEAIF 582
            A+ F+EA+F
Sbjct: 484 KADDFIEALF 493



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>FTSY_MYCHO (O32861) Cell division protein ftsY homolog|
          Length = 351

 Score =  187 bits (475), Expect = 2e-47
 Identities = 90/186 (48%), Positives = 134/186 (72%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS+ K+A +  +EG KVL+AAGDTFRAAA +QLEIWA+R G++IV  N+ +    +V
Sbjct: 157 GKTTSISKIAKKLIDEGKKVLIAAGDTFRAAAVEQLEIWAKRVGADIVTPNENEVDPAAV 216

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           + +A+   K + +DI++ DT+GRL     LM EL    +V+A  +P AP+E LLVLD TT
Sbjct: 217 VYRAIDIAKSKKYDILIVDTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATT 276

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + QA+ F +   +TG ILTK+DGT++GG V+++ DE+G+ VK++G+GE V+DL  F
Sbjct: 277 GQNGVIQARVFKESTPLTGIILTKMDGTSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEF 336

Query: 553 DAEAFV 570
           D ++++
Sbjct: 337 DLDSYI 342



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>FTSY_HAEIN (P44870) Cell division protein ftsY homolog|
          Length = 414

 Score =  181 bits (460), Expect = 1e-45
 Identities = 89/190 (46%), Positives = 130/190 (68%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLA +F+ EG  V++AAGDTFRAAA +QL++W ER    +V  +     A SV
Sbjct: 221 GKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQLQVWGERNHIPVVAQSTGSDSA-SV 279

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  A++       DI++ DT+GRL     LM+EL    +V+ K    AP+EI+L LD  T
Sbjct: 280 IFDAMQSAAARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGT 339

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N + QAK FN+ VG+TG  LTKLDGTA+GG + ++ D+  +P++++GVGE +EDL+ F
Sbjct: 340 GQNAISQAKLFNEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGVGEKIEDLREF 399

Query: 553 DAEAFVEAIF 582
           +A+ F+EA+F
Sbjct: 400 NAKEFIEALF 409



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>FTSY_MYCTU (P66842) Cell division protein ftsY homolog|
          Length = 422

 Score =  181 bits (460), Expect = 1e-45
 Identities = 98/189 (51%), Positives = 129/189 (68%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLA     +G +V++ A DTFRAAA DQL+ WA R G+ +V    + A   SV
Sbjct: 235 GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVV-RGPEGADPASV 293

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV +G   G D+VL DT+GRLHT  GLM+EL   K+V+ +    + +E+LLVLD T 
Sbjct: 294 AFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRR--ASVDEVLLVLDATI 351

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N L QA+ F +VV I+G +LTKLDGTA+GG V  V  ELG+PVK VG+GEG +DL PF
Sbjct: 352 GQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPF 411

Query: 553 DAEAFVEAI 579
           +  AFV+A+
Sbjct: 412 EPAAFVDAL 420



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>FTSY_MYCBO (P66843) Cell division protein ftsY homolog|
          Length = 422

 Score =  181 bits (460), Expect = 1e-45
 Identities = 98/189 (51%), Positives = 129/189 (68%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLA     +G +V++ A DTFRAAA DQL+ WA R G+ +V    + A   SV
Sbjct: 235 GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVV-RGPEGADPASV 293

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV +G   G D+VL DT+GRLHT  GLM+EL   K+V+ +    + +E+LLVLD T 
Sbjct: 294 AFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRR--ASVDEVLLVLDATI 351

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N L QA+ F +VV I+G +LTKLDGTA+GG V  V  ELG+PVK VG+GEG +DL PF
Sbjct: 352 GQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPF 411

Query: 553 DAEAFVEAI 579
           +  AFV+A+
Sbjct: 412 EPAAFVDAL 420



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>FTSY_MYCLE (O33010) Cell division protein ftsY homolog|
          Length = 430

 Score =  180 bits (456), Expect = 3e-45
 Identities = 97/189 (51%), Positives = 128/189 (67%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLA     +G +V++ A DTFRAAA DQL+ WA R G+E+V    + A   SV
Sbjct: 243 GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAELV-RGVEGADPASV 301

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AV +G   G D+V+ DT+GRLHT  GLM+EL   K+V+ +    A +E+LLVLD T 
Sbjct: 302 AFDAVDKGIGAGADVVVIDTAGRLHTKVGLMDELDKIKRVVTRR--AAVDEVLLVLDATI 359

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N L Q + F +VV ITG +LTKLDGTA+GG V  +  ELG+PVK VG+GEG +DL PF
Sbjct: 360 GQNGLTQVRVFAEVVDITGAVLTKLDGTAKGGIVFRIQRELGVPVKLVGLGEGPDDLAPF 419

Query: 553 DAEAFVEAI 579
           +   FV+A+
Sbjct: 420 EPAVFVDAL 428



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>FTSY_MYCPN (P75362) Cell division protein ftsY homolog|
          Length = 348

 Score =  171 bits (434), Expect = 1e-42
 Identities = 88/186 (47%), Positives = 120/186 (64%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTSL KLA +   +  +VLM AGDTFRA A  QL  WA+R G +IV+ N K+ + P+V
Sbjct: 148 GKTTSLAKLADQLTKQNKRVLMVAGDTFRAGAVAQLAEWAQRIGCDIVLPNPKE-ETPAV 206

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           + + V++G +  +D VLCDTSGRL     LM EL    +++ K     P E LLVLDGTT
Sbjct: 207 IFRGVQQGIQNEYDFVLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQETLLVLDGTT 266

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G + L QAK FN+   +TG ILTK+D +++GG ++++ D   +PVK +G GE   DL  F
Sbjct: 267 GQSGLAQAKVFNEFTELTGIILTKMDSSSKGGIILAIKDLFNLPVKLIGFGETTADLAAF 326

Query: 553 DAEAFV 570
           D E +V
Sbjct: 327 DLEQYV 332



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>FTSY_MYCGE (P47539) Cell division protein ftsY homolog|
          Length = 346

 Score =  169 bits (427), Expect = 7e-42
 Identities = 87/186 (46%), Positives = 119/186 (63%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+L K+A  F  +  +VL+ AGDTFRA A +QL  WA+    +IV+ N K+ Q P+V
Sbjct: 148 GKTTTLAKIADFFIKQNKRVLLVAGDTFRAGAIEQLNQWAKLLNCDIVLPNPKE-QTPAV 206

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           + + VK+G  + +D VLCDTSGRL     LM EL    ++I K     P+E LLVLDGT 
Sbjct: 207 IFRGVKKGIDDKYDFVLCDTSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTV 266

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G   L QAK FN+   +TG +LTK+DG+A+GG ++++ D   +PVK +G GE   DL  F
Sbjct: 267 GQTGLSQAKVFNEFSKLTGIVLTKMDGSAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIF 326

Query: 553 DAEAFV 570
           D E +V
Sbjct: 327 DLEKYV 332



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>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog|
          Length = 504

 Score =  167 bits (422), Expect = 3e-41
 Identities = 79/189 (41%), Positives = 123/189 (65%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKLA   K  G   ++AA DTFRAAA +Q+++W ER+G  ++ +  +     +V
Sbjct: 313 GKTTTIGKLAFMAKQSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAAV 372

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +   +   +    +++L DT+GRL     LM+EL   +++I K  P A  E LLVLD T 
Sbjct: 373 VYDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATL 432

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N L+QA+ F +   ++G +LTKLDG+A+GG  ++V  +L +P++F+G GEG+EDL+PF
Sbjct: 433 GQNGLRQAEVFAEAAKLSGVVLTKLDGSAKGGVALAVAQQLNLPIRFIGAGEGIEDLRPF 492

Query: 553 DAEAFVEAI 579
            +  FVEA+
Sbjct: 493 SSYEFVEAL 501



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>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog|
          Length = 397

 Score =  163 bits (412), Expect = 4e-40
 Identities = 86/189 (45%), Positives = 120/189 (63%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT +GKLA  +K +G  V++AAGDTFRAAA DQL++W E   S  VI  +  +   SV
Sbjct: 203 GKTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQLKLWGE-INSVSVITREIGSDPASV 261

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  A+K  K +  DI++ DT+GRLH    LMEEL   K+VI K       E +LVLD   
Sbjct: 262 VYDAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKKIKRVIHKIDSTISQETMLVLDACI 321

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N ++Q K F++ + +TG ++TKLD TA+GG + S+  E  IPV+++  GE  ED+Q F
Sbjct: 322 GQNSIKQVKIFHESLNVTGLVITKLDSTAKGGVIFSIAQEFLIPVRYISFGEDFEDIQVF 381

Query: 553 DAEAFVEAI 579
           ++  FV AI
Sbjct: 382 NSNIFVNAI 390



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>FTSY_BUCAI (P57137) Cell division protein ftsY homolog|
          Length = 378

 Score =  157 bits (398), Expect = 2e-38
 Identities = 78/190 (41%), Positives = 123/190 (64%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA ++K EG  +++AA DTFRAA  +QL+   +     ++        A +V
Sbjct: 189 GKTTTVAKLAEKYKLEGKSIMLAAADTFRAAGIEQLQTLGKLNNIPVIAQRSGSDPA-AV 247

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  AVK  K +  D+++ DT+GRLH    L+EEL    +VI K    AP+E LL++D   
Sbjct: 248 IFDAVKSAKSKKIDVLIIDTAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKLLIIDSCN 307

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N +QQ + F+  + +TG I+TKLDGTA+GG V S+ D+  IP++++G+GE ++DL  F
Sbjct: 308 GQNTIQQTEIFHKALNLTGIIITKLDGTAKGGVVFSLADQFQIPIRYIGIGEKMQDLGHF 367

Query: 553 DAEAFVEAIF 582
           +++ F+E+IF
Sbjct: 368 NSQEFIESIF 377



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>FTSY_RICPR (O05948) Cell division protein ftsY homolog|
          Length = 303

 Score =  156 bits (395), Expect = 4e-38
 Identities = 81/189 (42%), Positives = 116/189 (61%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GKL+  +  EG KV +AA DTFRAAA +QL  W  R  + ++I     A   SV
Sbjct: 113 GKTTTIGKLSALYSAEGKKVAVAACDTFRAAAINQLSSWVHRANA-LLITGKASADPASV 171

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             +A++   ++  DI+  DT+GRLH N  LM+EL    KVI K    AP   +L++D  T
Sbjct: 172 AYRAIEESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAIT 231

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N   Q + FNDV  +TG I+TKLDG+A+ G +V  V +  +PV F+G+GE +EDL+ F
Sbjct: 232 GQNTYNQIEYFNDVTNLTGLIVTKLDGSAKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIF 291

Query: 553 DAEAFVEAI 579
           +   F  ++
Sbjct: 292 NRHDFSRSL 300



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>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog|
          Length = 351

 Score =  152 bits (383), Expect = 9e-37
 Identities = 76/190 (40%), Positives = 120/190 (63%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA ++K  G  V++AA DTFRAA  +QL+I  +R     VI     +   SV
Sbjct: 161 GKTTTVSKLAKKYKLAGKSVMLAAADTFRAAGIEQLQILGKRNNIP-VISQSSGSDPASV 219

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              AVK    +  D+++ DT+GRLH    L+EEL    +VI K    AP+EI+L++D   
Sbjct: 220 AFDAVKSAISKKIDVLIIDTAGRLHNKLHLLEELKKMVRVIKKLNLSAPHEIMLIIDACN 279

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G N ++Q + F+  + +TG ++TKLDGTA+GG + S+ ++  IP++++G+GE   DL  F
Sbjct: 280 GQNTIKQTEMFHKAINLTGLVITKLDGTAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVF 339

Query: 553 DAEAFVEAIF 582
           ++  F+++IF
Sbjct: 340 NSNDFIKSIF 349



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>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291|
          Length = 409

 Score =  143 bits (361), Expect = 3e-34
 Identities = 81/190 (42%), Positives = 119/190 (62%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA++ K +G  V++AAGDTFRA A +QLE  A+  G + VI +   A + +V
Sbjct: 214 GKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVK-VIKHKPGADSAAV 272

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  A++  K  G D+VL DT+GR  TN  LMEE+   KKV+       P+ ++ V D  T
Sbjct: 273 IYDAIQHAKARGIDVVLADTAGRQATNVNLMEEI---KKVVRVT---KPDLVIFVGDALT 326

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G + + QA+EFN  V I G ILTK+D  A+GG  +S+   +G P+ ++GVG+  +DL  F
Sbjct: 327 GNDAVYQAEEFNRAVNIDGIILTKVDADAKGGAALSIGYAIGKPILYLGVGQRYQDLIEF 386

Query: 553 DAEAFVEAIF 582
           DA+  V  +F
Sbjct: 387 DADWMVRKLF 396



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>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)|
          Length = 454

 Score =  143 bits (361), Expect = 3e-34
 Identities = 80/189 (42%), Positives = 117/189 (61%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++GK+A+  K  G KV +++ D  R AA  QL+  AER G     + ++   A  +
Sbjct: 107 GKTTTIGKIANLLKKGGHKVAVSSTDLRRPAAMLQLQRLAERVGVPYY-EFEEGLGAVEI 165

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             +AVKR K E  D +L DT+GRLH +  LM+EL   K+V        P+EIL V D   
Sbjct: 166 ARRAVKRAKEESVDYLLLDTAGRLHVDEELMKELQEIKEVTN------PSEILYVADAMQ 219

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G   L+ AK F++ +G+TG ++TK+DG ARGG  +SV + LG+P+KF+GVGE +ED++PF
Sbjct: 220 GQTALETAKTFHERLGLTGVVITKMDGDARGGLALSVKEVLGVPIKFIGVGEKIEDIEPF 279

Query: 553 DAEAFVEAI 579
             +   + I
Sbjct: 280 YPDRIAQRI 288



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>FTSY_HELPY (O25458) Cell division protein ftsY homolog|
          Length = 293

 Score =  143 bits (360), Expect = 4e-34
 Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA     +  K L+ AGDTFRAAA  QL++W E+   +++  + K+   PS 
Sbjct: 98  GKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVI--SAKEGSDPSS 155

Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           L+   ++    +  D V  DT+GRLH    L  EL    +  +K L  AP    L+LDGT
Sbjct: 156 LAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGT 215

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G + L QAK F++ + + G I+TKLDGT++GG ++SV+ EL +P+ ++G+GE  +DL  
Sbjct: 216 QGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIA 275

Query: 550 FDAEAFVE 573
           FD E F+E
Sbjct: 276 FDEERFIE 283



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>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog|
          Length = 293

 Score =  142 bits (357), Expect = 9e-34
 Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 1/188 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA     +  K L+ AGDTFRAAA  QL++W E+   +++  + K+   PS 
Sbjct: 98  GKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVI--SAKEGSDPSS 155

Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           L+   ++    +  D V  DT+GRLH    L  EL       +K L  AP    L+LDGT
Sbjct: 156 LAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGT 215

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G + L QAK F++ + + G I+TKLDGT++GG ++SV+ EL +P+ ++G+GE  +DL  
Sbjct: 216 QGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIA 275

Query: 550 FDAEAFVE 573
           FD E F+E
Sbjct: 276 FDEERFIE 283



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>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast|
           precursor (SRP54) (54 chloroplast protein) (54CP) (FFC)
          Length = 564

 Score =  132 bits (333), Expect = 6e-31
 Identities = 76/180 (42%), Positives = 101/180 (56%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT   KLA   K +G   ++ AGD +R AA DQL I  E+ G  +         A  +
Sbjct: 188 GKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPA-DI 246

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             Q +K  K+   D+V+ DT+GRL  + G+M+EL   KK +       P E+LLV+D  T
Sbjct: 247 AKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLN------PTEVLLVVDAMT 300

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G         FN  +GITG ILTKLDG +RGG  +SV +  G P+K VG GE +EDL+PF
Sbjct: 301 GQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 360



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>SRP54_SYNP7 (Q55311) Signal sequence-binding protein|
          Length = 485

 Score =  132 bits (333), Expect = 6e-31
 Identities = 77/189 (40%), Positives = 106/189 (56%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA   + EG   L+ A D +R AA DQL    ++     V +    A    +
Sbjct: 112 GKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVP-VFELGSDANPVEI 170

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             Q V++ ++EG D V+ DT+GRL  +  +MEEL   K+ IA      P+E+LLV+D   
Sbjct: 171 ARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEAIA------PHEVLLVVDSMI 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G       + F++ +GITG ILTKLDG +RGG  +S+    G P+KFVG+GE VE LQPF
Sbjct: 225 GQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKVEALQPF 284

Query: 553 DAEAFVEAI 579
             E     I
Sbjct: 285 HPERMASRI 293



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>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)|
          Length = 451

 Score =  132 bits (331), Expect = 1e-30
 Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA   +  G K  + A DT+R AA +QL+  AE+    I  D  +      +
Sbjct: 112 GKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDI 171

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           + + +++ K+   D+++ DT+GR     GL+EE+   K++        P+EI+LV+DGT 
Sbjct: 172 VKEGMEKFKKA--DVLIIDTAGRHKEEKGLLEEMKQIKEITN------PDEIILVIDGTI 223

Query: 373 GLNMLQQAKEFNDVVGITG-FILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
           G     QAK F + VG  G  I+TKLDG+A+GG  +S V E   P+KF+G+GEG++DL+P
Sbjct: 224 GQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEP 283

Query: 550 FDAEAFVEAI 579
           FD + F+  +
Sbjct: 284 FDPKKFISRL 293



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>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)|
          Length = 448

 Score =  131 bits (329), Expect = 2e-30
 Identities = 68/186 (36%), Positives = 112/186 (60%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLAH  K +  KVL+ A D  R AA +QL++  E+ G E+  + +K  +   +
Sbjct: 106 GKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVK--EI 163

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
            S A+KR K   FD++L D++GRL  +  LM+EL   K+++       P+E+L V D  +
Sbjct: 164 ASNALKRAKEAQFDVLLVDSAGRLAIDKELMQELKEVKEILN------PHEVLYVADALS 217

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G + ++ A  FN+ +G++G +L+K D  ++GG  + +  +LG+P++F+G GE + DL  F
Sbjct: 218 GQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVF 277

Query: 553 DAEAFV 570
             E  V
Sbjct: 278 VPERIV 283



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>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)|
          Length = 429

 Score =  130 bits (327), Expect = 3e-30
 Identities = 75/183 (40%), Positives = 108/183 (59%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA  +K +G + L+ A DT R AAR+QL +  E+ G  ++   D ++   S+
Sbjct: 109 GKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPE-SI 167

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             +  ++ + E  D++L DT+GRL  +  LM EL   K+V+       P+E+LLVLD  T
Sbjct: 168 RRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLG------PDEVLLVLDAMT 221

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G   L  A+ F++ VG+TG +LTKLDG ARGG  +S     G P+ F GV E  E L+PF
Sbjct: 222 GQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPF 281

Query: 553 DAE 561
             E
Sbjct: 282 YPE 284



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>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)|
          Length = 446

 Score =  130 bits (326), Expect = 4e-30
 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRF-KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTT+ GKLA+   K    K ++ A D +R AA  QLE   ++    +    D+ +    
Sbjct: 113 GKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPV-E 171

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  QA+++ K E +D V+ DT+GRLH ++ LM+EL + K++        P EI LV+D  
Sbjct: 172 IAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKEI------ANPEEIFLVVDSM 225

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
           TG + +  AK FN+ +G+TG +LTKLDG  RGG  +S+      P+KF G+GE ++ L+P
Sbjct: 226 TGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEP 285

Query: 550 FDAEAFVEAI 579
           F  E     I
Sbjct: 286 FHPERMASRI 295



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>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)|
          Length = 448

 Score =  129 bits (323), Expect = 8e-30
 Identities = 67/186 (36%), Positives = 112/186 (60%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLAH  K +  KVL+ A D  R AA +QL++  E+ G E+  + +K  +   +
Sbjct: 106 GKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENKSVK--EI 163

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
            + A+KR K   FD+++ D++GRL  +  LM+EL   K+V+       P+E+L V D  +
Sbjct: 164 ANNALKRAKEAQFDVLIVDSAGRLAIDKELMQELKEVKEVLN------PHEVLYVADALS 217

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G + ++ A  FN+ +G++G +L+K D  ++GG  + +  +LG+P++F+G GE + DL  F
Sbjct: 218 GQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVF 277

Query: 553 DAEAFV 570
             E  V
Sbjct: 278 MPERIV 283



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>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)|
          Length = 448

 Score =  127 bits (318), Expect = 3e-29
 Identities = 70/189 (37%), Positives = 107/189 (56%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS+ KLA   +  G KV +   DT+R  A  QL    +  G E+  D ++K  A  +
Sbjct: 112 GKTTSVAKLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEK-DAVKL 170

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + V+  + +G D+++ D++GR     GL+EE+    + I       P+E++LV+DGT 
Sbjct: 171 AREGVEHFREKGVDVIIVDSAGRHKEEKGLIEEMRQISEAIK------PHEVILVIDGTI 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QA  F +   I   I+TKLDG+A+GG  +S V   G P+KF+G GE ++DL+PF
Sbjct: 225 GQQAYNQAMAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPF 284

Query: 553 DAEAFVEAI 579
           D + FV  +
Sbjct: 285 DPKRFVSRL 293



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>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score =  126 bits (317), Expect = 4e-29
 Identities = 72/189 (38%), Positives = 105/189 (55%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA  F+  G KV +   DT+R  A  QL    +R   E V  N ++  A  +
Sbjct: 112 GKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIE-VFGNPQEKDAIKL 170

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + V   K +G DI++ DT+GR   +  L+EE+     VI       P+E++LV+DGT 
Sbjct: 171 AKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIH------PHEVILVIDGTI 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QA  F +   I   I+TKLDG+A+GG  +S V   G P+KF+G GE ++D++PF
Sbjct: 225 GQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPF 284

Query: 553 DAEAFVEAI 579
           D   FV  +
Sbjct: 285 DPPRFVSRL 293



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>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score =  126 bits (316), Expect = 5e-29
 Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTT+ GKLA   K +   K ++ A D +R AA DQL   AE+T S       K  QAP 
Sbjct: 111 GKTTTCGKLAVWLKKQFQQKAMLVALDIYRPAAIDQLATLAEQTESVFFA---KGTQAPD 167

Query: 190 -VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
               +AVK  K  G   ++CDT+GRL TN  LM+ELV+ K  +       P+EIL+V+DG
Sbjct: 168 QTTKEAVKTFKESGCQAIICDTAGRLQTNQELMDELVAIKNELH------PDEILMVVDG 221

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
            +G  ++  AKEF++ + +TGFI+TKLD  AR G  +S+   L +P+K +G  E +  L+
Sbjct: 222 LSGQEIINVAKEFHNRLKLTGFIITKLDSDARAGAALSLTSLLEVPIKLMGTSEKLTGLE 281

Query: 547 PFDAEAFVEAI 579
            F  E     I
Sbjct: 282 QFHPERIASRI 292



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>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking|
           protein) (P41)
          Length = 369

 Score =  125 bits (315), Expect = 7e-29
 Identities = 75/190 (39%), Positives = 110/190 (57%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ K+ +  K      ++AA DTFRAAA++QL   A +   ++ I     A   SV
Sbjct: 185 GKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQL-IRGKYGADPASV 243

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
              A+   K    D+VL DT+GR+H +  L+EEL   K+V+  A    P+  +L+LD   
Sbjct: 244 AFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEEL---KRVLRIA---KPDFRILILDSLA 297

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G + L+QA+ F + VG    ILTK+D  A+GG  +S+  EL  PV ++GVG+  +DL PF
Sbjct: 298 GSDALEQARHFENNVGYDAVILTKVDADAKGGIALSLAYELKKPVVYMGVGQNYDDLIPF 357

Query: 553 DAEAFVEAIF 582
             + FVE IF
Sbjct: 358 SPDWFVERIF 367



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>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)|
          Length = 482

 Score =  125 bits (313), Expect = 1e-28
 Identities = 76/180 (42%), Positives = 99/180 (55%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA   + +    LM A D +R AA DQL+   ++     V D    A    +
Sbjct: 112 GKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVP-VFDLGSDANPVEI 170

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             Q V++ K  G D VL DT+GRL  +  +M EL   K+V+       P++ LLV+D  T
Sbjct: 171 ARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELAEIKQVVK------PDDTLLVVDAMT 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G         F++ +GITG ILTKLDG  RGG  +SV    G P+KFVGVGE VE LQPF
Sbjct: 225 GQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPF 284



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>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)|
           (p48)
          Length = 453

 Score =  124 bits (312), Expect = 2e-28
 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTTS+GKL    + +  K VL+ + D +R AA  QLE  AE+ G +    +D   +   
Sbjct: 112 GKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF-FPSDVGQKPVD 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +++ A+K  K + +D++L DT+GRLH +  +M+E+   K+V A      P E L V+D  
Sbjct: 171 IVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI---KQVHASI---NPVETLFVVDAM 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
           TG +    AK FN+ + +TG +LTK+DG ARGG  +S+    G P+KF+GVGE  E L+P
Sbjct: 225 TGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEP 284

Query: 550 FDAEAFVEAI 579
           F  +     I
Sbjct: 285 FHPDRIASRI 294



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>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)|
          Length = 453

 Score =  124 bits (312), Expect = 2e-28
 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTTS+GKL    + +  K VL+ + D +R AA  QLE  AE+ G +    +D   +   
Sbjct: 112 GKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF-FPSDVGQKPVD 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +++ A+K  K + +D++L DT+GRLH +  +M+E+   K+V A      P E L V+D  
Sbjct: 171 IVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI---KQVHASI---NPVETLFVVDAM 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
           TG +    AK FN+ + +TG +LTK+DG ARGG  +S+    G P+KF+GVGE  E L+P
Sbjct: 225 TGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEP 284

Query: 550 FDAEAFVEAI 579
           F  +     I
Sbjct: 285 FHPDRIASRI 294



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>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)|
          Length = 453

 Score =  124 bits (312), Expect = 2e-28
 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTTS+GKL    + +  K VL+ + D +R AA  QLE  AE+ G +    +D   +   
Sbjct: 112 GKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF-FPSDVGQKPVD 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +++ A+K  K + +D++L DT+GRLH +  +M+E+   K+V A      P E L V+D  
Sbjct: 171 IVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI---KQVHASI---NPVETLFVVDAM 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
           TG +    AK FN+ + +TG +LTK+DG ARGG  +S+    G P+KF+GVGE  E L+P
Sbjct: 225 TGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEP 284

Query: 550 FDAEAFVEAI 579
           F  +     I
Sbjct: 285 FHPDRIASRI 294



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>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)|
          Length = 449

 Score =  122 bits (307), Expect = 6e-28
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAE--RTGSEIVIDNDKKAQAP 186
           GKTT+  KLA R +N+  KVL+ + DT+R AA++QL I A   +  S  ++  +K     
Sbjct: 114 GKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGEKPLD-- 171

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
            ++ +A+   K   +D+V+ DT+GR   +  +MEE ++ KK++       P E LLV+D 
Sbjct: 172 -IVKRAIAEAKISAYDVVIYDTAGRTQIDKAMMEEALAIKKIVE------PTETLLVIDS 224

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
            TG + +  A  FN+ + I+G IL+++DG ++GG  +SV      P+KF+  GE + DL+
Sbjct: 225 MTGQDAVVTASSFNEKLAISGLILSRIDGDSKGGAALSVKYITKKPIKFLSSGENLIDLE 284

Query: 547 PFDAEAFVEAI 579
            FDAE     I
Sbjct: 285 EFDAERLASRI 295



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>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)|
          Length = 433

 Score =  122 bits (307), Expect = 6e-28
 Identities = 71/189 (37%), Positives = 108/189 (57%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  K+A  FK+ G KV + A DT+R AA +QL   AE  G     +  +K  A  +
Sbjct: 105 GKTTTTAKMAKYFKDRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEK-DAVKI 163

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +  A++  K +  D+++ DT+GR      L++E++   +V        P+  LLVLD   
Sbjct: 164 VKNALE--KLKDHDMIIIDTAGRHALEDELIDEMIKIAEV------ARPDYKLLVLDAAI 215

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G    +QA+ F++ +GI G I+TK DGTA+GG  +S   ++GIP+ F+G GE VED + F
Sbjct: 216 GQLASKQAQAFHEAIGINGIIITKFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERF 275

Query: 553 DAEAFVEAI 579
           D   FV  +
Sbjct: 276 DPAGFVSRL 284



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>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)|
          Length = 456

 Score =  122 bits (305), Expect = 1e-27
 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+ GKLA  F  +G    + A D  R AA DQL+  A    ++   D  +K      
Sbjct: 109 GKTTTAGKLARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPV--- 165

Query: 193 LSQAVKRGKREGFDIV--LCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
             + +K G  +  D+   + DTSGR   +  L +E+   K+ +A      P+E+L+++D 
Sbjct: 166 --RLIKHGLEQLKDVAVKIIDTSGRDSMDAELFDEIRRIKEAVA------PDEVLMIIDA 217

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
           T G     +AK FND +G+TG I+TK+DGTA+GG  +S V E+ +P+ F+G GE ++DL+
Sbjct: 218 TMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLE 277

Query: 547 PFDAEAFVEAI 579
            FD + F+  +
Sbjct: 278 VFDPKKFLSRL 288



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>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 487

 Score =  122 bits (305), Expect = 1e-27
 Identities = 72/189 (38%), Positives = 106/189 (56%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA  +KN G K  +   DTFRA A +QL++ A+R G        +++    V
Sbjct: 113 GKTTTITKLALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPF-FGIKEESDPVKV 171

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
            S+ V+  ++E  DI+L DTSGR   +  L +E+ S +  I       P+ I+ V+DG  
Sbjct: 172 ASEGVRTFRKEKNDIILVDTSGRHKQDKELFKEMQSVRDAIK------PDSIIFVMDGAI 225

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QAK F D V +   I+TKLDG + GG  +S V     P+ F+G GE V +++ F
Sbjct: 226 GQAAFGQAKAFKDAVEVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEF 285

Query: 553 DAEAFVEAI 579
           DAE+FV  +
Sbjct: 286 DAESFVRQL 294



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>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)|
          Length = 516

 Score =  121 bits (304), Expect = 1e-27
 Identities = 75/181 (41%), Positives = 100/181 (55%), Gaps = 1/181 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRF-KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTT  GKLA++  K E A+ LM A D +R AA DQL+   ++     V D   +  A  
Sbjct: 113 GKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVP-VFDMGTEHSAVE 171

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           ++SQ + + K    D VL DT+GRL  +  LM EL   K +        PNEILLV+D  
Sbjct: 172 IVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL------ANPNEILLVVDSM 225

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G      A+EFN  + +TG ILTK+DG  RGG  +SV    G P+KF G GE + D++ 
Sbjct: 226 IGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIET 285

Query: 550 F 552
           F
Sbjct: 286 F 286



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>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score =  121 bits (303), Expect = 2e-27
 Identities = 69/189 (36%), Positives = 108/189 (57%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA  F+  G KV +   DT+R  A  QL+   +    E+  D ++K  A  +
Sbjct: 112 GKTTTVAKLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEK-DAIKL 170

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + V+  K +G D+++ DT+GR      L+EE+    ++I+  +   P+E++LV+DGT 
Sbjct: 171 AKEGVEHFKAKGVDLIIVDTAGRHKEEKDLIEEM----RMISNEIK--PHEVILVIDGTI 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QA  F +   I   I+TKLD +A+GG  +S V   G P+KF+G GE ++DL+PF
Sbjct: 225 GQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPF 284

Query: 553 DAEAFVEAI 579
           D   FV  +
Sbjct: 285 DPARFVSRL 293



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>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)|
          Length = 462

 Score =  120 bits (300), Expect = 4e-27
 Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAK-VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTTS+GKLA   +    K VL+ + D +R AA  QLE  A+  G +    +D K     
Sbjct: 112 GKTTSVGKLAKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDF-FPSDVKQNPVD 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +   A+   K + +D+++ DT+GRLH +  +M+E+    K +  AL   P E L  +D  
Sbjct: 171 IAKSALADAKLKFYDVLIVDTAGRLHVDTEMMDEI----KQVHAALN--PIETLFTVDAM 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
           TG +    AK FN+ + +TG ILTK+DG ARGG  +S+    G P+KF+GVGE  E L+P
Sbjct: 225 TGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTEALEP 284

Query: 550 FDAEAFVEAI 579
           F  +     I
Sbjct: 285 FHPDRVASRI 294



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>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)|
          Length = 447

 Score =  119 bits (297), Expect = 9e-27
 Identities = 71/182 (39%), Positives = 105/182 (57%), Gaps = 2/182 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRF-KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP- 186
           GKTT+  KLA+   K    KVL+   D +R  A +QL    ++T +++    +K  Q P 
Sbjct: 113 GKTTTANKLAYLLNKKNKKKVLLVGLDIYRPGAIEQLVQLGQKTNTQVF---EKGKQDPV 169

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
               QA++  K   FD+V+ DT+GRL  +  LM+EL + KK  +      PNEILLV+DG
Sbjct: 170 KTAEQALEYAKENNFDVVILDTAGRLQVDQVLMKELDNLKKKTS------PNEILLVVDG 223

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
            +G  ++    EFND + ++G ++TKLDG ARGG  +S+     +P+KF+G GEG   L 
Sbjct: 224 MSGQEIINVTNEFNDKLKLSGVVVTKLDGDARGGATLSISYLTKLPIKFIGEGEGYNALA 283

Query: 547 PF 552
            F
Sbjct: 284 AF 285



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>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score =  119 bits (297), Expect = 9e-27
 Identities = 69/189 (36%), Positives = 108/189 (57%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT++ KLA  F+  G KV +   DT+R  A  QL+   +    E+  D ++K  A  +
Sbjct: 112 GKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEK-DAVKL 170

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + V+  K    D+++ DT+GR      L+EE+    ++I++ +   P+E++LV+DGT 
Sbjct: 171 AKEGVEYFKTRDVDLIIVDTAGRHKEEKDLIEEM----RMISEEI--RPHEVILVIDGTI 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QA  F +   I   I+TKLD +A+GG  +S V   G P+KF+GVGE ++DL+PF
Sbjct: 225 GQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPF 284

Query: 553 DAEAFVEAI 579
           D   FV  +
Sbjct: 285 DPARFVSRL 293



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>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)|
          Length = 440

 Score =  118 bits (296), Expect = 1e-26
 Identities = 74/189 (39%), Positives = 99/189 (52%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS  KLA  F+ +G K  + A DTFR  A  QL+  AE+         +    A  +
Sbjct: 109 GKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFY-GEEGNPDAVEI 167

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
               +K    E +DI + DT+GR      L+EE+     V        P+   +VLD   
Sbjct: 168 TKNGLKA--LEKYDIRIVDTAGRHALEADLIEEMERIHAV------AKPDHKFMVLDAGI 219

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G    QQA  FND VGITG I+TKLDGTA+GG  +S V E   P+ F+GVGE  ED + F
Sbjct: 220 GQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKF 279

Query: 553 DAEAFVEAI 579
           +A+ F+  +
Sbjct: 280 EADRFISRL 288



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>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)|
          Length = 451

 Score =  118 bits (296), Expect = 1e-26
 Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTTSL KL    KN+   K+L+ + DT+RAAA +QL+I +++   +   ++DK      
Sbjct: 112 GKTTSLAKLGKWIKNKYKKKILITSTDTYRAAAIEQLKILSDQIEIDF-FESDKHHTPIE 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +   A+K  K + +D++L DT+GRLH +  +M E+   + VI+KA+     E LL++D  
Sbjct: 171 ITKNAIKYAKLKLYDVLLIDTAGRLHIDKKMMNEIQQIQ-VISKAI-----ETLLIVDSM 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G + +  AK FN+ + I+G ILTK DG +R G  +S+    G P+KF+G GE +  L+P
Sbjct: 225 MGQDAINMAKIFNNDLLISGIILTKTDGDSRSGIALSMRYITGKPIKFIGTGEKIISLEP 284

Query: 550 FDAEAFVEAI 579
           F  E   + I
Sbjct: 285 FHPERIADRI 294



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>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)|
          Length = 449

 Score =  118 bits (296), Expect = 1e-26
 Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEI--VIDNDKKAQAP 186
           GKTT+ GKLA R KN+  KVL+ + DT+R AA++QL I A     +   ++  +K     
Sbjct: 114 GKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIIANSVNIDSLPIVKGEKPLD-- 171

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
            ++ +A+   +   +D+V+ DT+GR+  +  +MEE ++ KK++       P E LLV+D 
Sbjct: 172 -IVKRAIGEAQISAYDVVIYDTAGRIQIDNVMMEEALAIKKILN------PTETLLVIDS 224

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
            TG + +  AK F++ + I+G IL+++DG  +GG  +SV      P+KF+  GE + DL+
Sbjct: 225 MTGQDAVITAKTFSEKLEISGLILSRIDGDTKGGAALSVKYFTQKPIKFLSSGEKLTDLE 284

Query: 547 PFDAEAFVEAI 579
            F+AE     I
Sbjct: 285 EFNAERLASRI 295



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>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 541

 Score =  118 bits (295), Expect = 1e-26
 Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERT-----GSEIVIDNDKKA 177
           GKTTS  KLA  +   G KV +   DTFRA A DQL+  A R      GS    D  K A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180

Query: 178 QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLV 357
           +      + + + K+E FDI++ DTSGR H    L +E++    VI       PN+ ++V
Sbjct: 181 E------EGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIK------PNQTIMV 228

Query: 358 LDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE 537
           LD + G    QQ+K F +       ILTK+DG ARGG  +S V     P+ F+G GE + 
Sbjct: 229 LDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIH 288

Query: 538 DLQPFDAEAFVEAI 579
           DL+ F  ++F+  +
Sbjct: 289 DLEKFSPKSFISKL 302



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>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)|
          Length = 442

 Score =  117 bits (294), Expect = 2e-26
 Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDND-KKAQAPS 189
           GKTT++GKLA   + +G  V +   DT+R AA +QL+ + E  G ++ I  D +   A  
Sbjct: 111 GKTTTIGKLARYLRKKGFTVGVVCTDTWRPAALEQLKQYTE--GQDVSIYGDPQNRDALD 168

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + + R +++  D+++ DT+GR      L+ E+     ++       P+E +LV+DGT
Sbjct: 169 LAEKGLARFQKK--DVIIFDTAGRHKEEKDLLREMEELSAIVE------PHEAILVIDGT 220

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G    +QA  F     I   I+TKLDG+A+GG  +S V E+G P+KF+G GE ++DL+ 
Sbjct: 221 IGQQAREQALAFRKATDIGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGERIDDLEV 280

Query: 550 FDAEAFVEAI 579
           FD E F+  +
Sbjct: 281 FDPERFISRL 290



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>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score =  117 bits (292), Expect = 3e-26
 Identities = 73/189 (38%), Positives = 99/189 (52%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS  KLA  F+ +G K  + A DTFR  A  QL+  +E+         +    A  +
Sbjct: 109 GKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFY-GEEGNPDAVEI 167

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
               +K    E +DI + DT+GR      L+EE+     V        P+   +VLD   
Sbjct: 168 TIHGLKA--LEKYDIKIVDTAGRHALEADLIEEMERIHAV------AKPDHKFMVLDAGI 219

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G    QQA  FND VGITG I+TKLDGTA+GG  +S V E   P+ F+GVGE  ED + F
Sbjct: 220 GQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKF 279

Query: 553 DAEAFVEAI 579
           +A+ F+  +
Sbjct: 280 EADRFISRL 288



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>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 499

 Score =  115 bits (289), Expect = 7e-26
 Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + +          P V
Sbjct: 112 GKTTTCTKLAYHYQKKGWKTCLVCADTFRAGAFDQLK--QNATKARVPFYGSYTEMDPVV 169

Query: 193 LSQ-AVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           ++Q  V++ K + F++++ DTSGR      L EE++   + I       P+ I+ V+DGT
Sbjct: 170 IAQEGVEKFKEDSFEVIIVDTSGRHKQEESLFEEMLQVSQAID------PDNIIFVMDGT 223

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QA+ F + V +   I+TKLDG A+GG  +S V     P+ F+G GE +++++P
Sbjct: 224 IGQACESQARAFKEKVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEP 283

Query: 550 FDAEAFVEAI 579
           F  + FV  +
Sbjct: 284 FKTKPFVSKL 293



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>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score =  115 bits (287), Expect = 1e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + I          P +
Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170

Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           + S+ V++ K E F+I++ DTSGR      L EE++     I       P+ I+ V+D +
Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQ------PDNIVYVMDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QAK F D V +   I+TKLDG A+GG  +S V     P+ F+G GE ++D +P
Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 285 FKTQPFISKL 294



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>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score =  114 bits (286), Expect = 2e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + I          P +
Sbjct: 113 GKTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170

Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           + S+ V++ K E F+I++ DTSGR      L EE++     I       P+ I+ V+D +
Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQ------PDNIVYVMDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QAK F D V +   I+TKLDG A+GG  +S V     P+ F+G GE ++D +P
Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 285 FKTQPFISKL 294



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>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score =  114 bits (286), Expect = 2e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + I          P +
Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170

Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           + S+ V++ K E F+I++ DTSGR      L EE++     I       P+ I+ V+D +
Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QAK F D V +   I+TKLDG A+GG  +S V     P+ F+G GE ++D +P
Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 285 FKTQPFISKL 294



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>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score =  114 bits (286), Expect = 2e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + I          P +
Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170

Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           + S+ V++ K E F+I++ DTSGR      L EE++     I       P+ I+ V+D +
Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QAK F D V +   I+TKLDG A+GG  +S V     P+ F+G GE ++D +P
Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 285 FKTQPFISKL 294



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>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score =  114 bits (286), Expect = 2e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + I          P +
Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170

Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           + S+ V++ K E F+I++ DTSGR      L EE++     I       P+ I+ V+D +
Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QAK F D V +   I+TKLDG A+GG  +S V     P+ F+G GE ++D +P
Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 285 FKTQPFISKL 294



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>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score =  114 bits (286), Expect = 2e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA+ ++ +G K  +   DTFRA A DQL+     T + I          P +
Sbjct: 113 GKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMDPVI 170

Query: 193 L-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           + S+ V++ K E F+I++ DTSGR      L EE++     I       P+ I+ V+D +
Sbjct: 171 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QAK F D V +   I+TKLDG A+GG  +S V     P+ F+G GE ++D +P
Sbjct: 225 IGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEP 284

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 285 FKTQPFISKL 294



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>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)|
          Length = 455

 Score =  113 bits (283), Expect = 4e-25
 Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTTS GKL+  F  +G    + A D  R AA +QL+  AE   ++   D  +K      
Sbjct: 109 GKTTSAGKLSRFFMKKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPV--- 165

Query: 193 LSQAVKRGKR--EGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
             + +K G    +   + + DTSGR   +  L+EE+   K+ +       P+++L+V+D 
Sbjct: 166 --KIIKNGLEVLKDAQVKIIDTSGRDSLDSDLIEEIRRIKEAVK------PDQVLMVIDA 217

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
           T G     ++K  ND VG+TG I+TK+DGTA+GG  +S V ++ +P+ F+G GE ++D++
Sbjct: 218 TMGQQAGPESKAINDAVGVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDME 277

Query: 547 PFDAEAFVEAI 579
            FD + F+  +
Sbjct: 278 IFDPKKFLSRL 288



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>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)|
          Length = 446

 Score =  111 bits (278), Expect = 1e-24
 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAG-DTFRAAARDQLEIWAERTGSEIVIDNDKK-AQAP 186
           GKTT+ GKLA+  + +  +  M  G D +R AA +QLE  +++T S       +  A+  
Sbjct: 111 GKTTTCGKLAYWLEKKYKQKTMLVGLDIYRPAAIEQLETLSQQTNSVFFAQGTQPVAKTT 170

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
                A K  K +    ++CDT+GRL TN  LM+ELVS K  +       P+EI++V+DG
Sbjct: 171 KAALSAFKTAKCQ---TIICDTAGRLQTNETLMDELVSVKNELN------PDEIIMVVDG 221

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
            +G  ++  A+ F+  + +TGFI++KLD  AR G  +S+   L +P+K +GV E ++ L+
Sbjct: 222 LSGQEIINVAQTFHKRLKLTGFIISKLDSDARAGAALSLASLLQVPIKLIGVSEKLDGLE 281

Query: 547 PFDAEAFVEAI 579
            F  E     I
Sbjct: 282 QFHPERIANRI 292



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>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score =  111 bits (277), Expect = 2e-24
 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-- 186
           GKTT  GKLA R + +G   L+ A D  R AA +QL++  ER G  +   +   +     
Sbjct: 112 GKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGP 171

Query: 187 ----SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILL 354
               +V +  +   + + FD+V+ DT+GRL    G+ EEL++    I  A+   P+E+L 
Sbjct: 172 GDPVAVAAAGLAEARAKHFDVVIVDTAGRL----GIDEELMAQAAAIRDAIN--PDEVLF 225

Query: 355 VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV 534
           VLD   G + +  A  F + VG TG  LTKLDG ARGG  +SV +  G+P+ F   GE +
Sbjct: 226 VLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKL 285

Query: 535 EDLQPFDAEAFVEAI 579
           ED   F  +     I
Sbjct: 286 EDFDVFHPDRMASRI 300



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>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score =  111 bits (277), Expect = 2e-24
 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-- 186
           GKTT  GKLA R + +G   L+ A D  R AA +QL++  ER G  +   +   +     
Sbjct: 112 GKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGP 171

Query: 187 ----SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILL 354
               +V +  +   + + FD+V+ DT+GRL    G+ EEL++    I  A+   P+E+L 
Sbjct: 172 GDPVAVAAAGLAEARAKHFDVVIVDTAGRL----GIDEELMAQAAAIRDAIN--PDEVLF 225

Query: 355 VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV 534
           VLD   G + +  A  F + VG TG  LTKLDG ARGG  +SV +  G+P+ F   GE +
Sbjct: 226 VLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKL 285

Query: 535 EDLQPFDAEAFVEAI 579
           ED   F  +     I
Sbjct: 286 EDFDVFHPDRMASRI 300



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>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)|
          Length = 447

 Score =  110 bits (276), Expect = 2e-24
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA   + +G +V +   D +R AA +QL   AE     + +++   A     
Sbjct: 113 GKTTTAAKLARYLQRKGYRVGLVGADPYRPAAGEQLRQLAEEVDVPVHVEDVDDA----- 167

Query: 193 LSQAVK--RGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
           +  AVK     ++  D+V+ DT+GR   +  L++EL    + I       P+E+LLVLD 
Sbjct: 168 VEMAVKGVEALKDECDVVIVDTAGRDRLSEDLIDELREMAERIE------PHEVLLVLDA 221

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
           T G      A+ F++ V +TG ++TKLD  A+GG  +S V   G P+KFVG GE V+DL+
Sbjct: 222 TVGQKAGDHAEAFHEAVQLTGVVITKLDTAAKGGGALSAVARTGAPIKFVGTGERVDDLE 281

Query: 547 PFDAEAFV 570
            F+  +FV
Sbjct: 282 EFNPRSFV 289



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>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)|
          Length = 451

 Score =  110 bits (275), Expect = 3e-24
 Identities = 66/189 (34%), Positives = 106/189 (56%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+ GKLA+ +K +G KV +   D +R AA +QL+   ++ G  +  +  +K  A  +
Sbjct: 110 GKTTTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEK-DAVGI 168

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + V++   E  +I++ DT+GR    YG    L+   K I +A+   P+E+ LV+D + 
Sbjct: 169 AKRGVEKFLSEKMEIIIVDTAGR--HGYGEEAALLEEMKNIYEAIK--PDEVTLVIDASI 224

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G      A +FN    I   I+TK+DGTA+GG  +S V   G  +KF+G GE +++L+ F
Sbjct: 225 GQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVF 284

Query: 553 DAEAFVEAI 579
           +   FV  I
Sbjct: 285 NPRRFVARI 293



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>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score =  109 bits (272), Expect = 7e-24
 Identities = 64/191 (33%), Positives = 108/191 (56%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP- 186
           GKTT+L KLA   K +   K+L  + D +RAAA  QL+I +++   +  + +    Q P 
Sbjct: 112 GKTTTLVKLAKWIKEKYKKKILTVSTDIYRAAAIKQLQILSDQVKIDFYLSDT--TQTPI 169

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
           ++  +A++  K + +D++L DT+GRLH N  +M E+ + + +        P E LL++D 
Sbjct: 170 NITKEAIEHAKLKLYDLLLIDTAGRLHINTEMMNEINTIQNI------SKPIETLLIVDS 223

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
             G + +  AK+F+  + I+G ++TK D  AR G  +S+    G P+KF+G GE +  L+
Sbjct: 224 MMGQDAINIAKKFSASLSISGIVITKTDSDARSGVALSIRHITGKPIKFIGTGEKLHQLE 283

Query: 547 PFDAEAFVEAI 579
           PF  E   + I
Sbjct: 284 PFHPERIADRI 294



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>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)|
          Length = 521

 Score =  109 bits (272), Expect = 7e-24
 Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 6/195 (3%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDN-----DKKA 177
           GKTT  GKLA R + +G   L+ A D  R AA +QL++  ER G  +   +     D   
Sbjct: 112 GKTTLAGKLAVRLRRQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPDSGP 171

Query: 178 QAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILL 354
             P +V S  +   + + FD+V+ DT+GRL    G+ +EL++    I +A+   P+E+L 
Sbjct: 172 GDPVAVASAGLVEARAKHFDVVIVDTAGRL----GIDDELMAQAGAIREAIN--PDEVLF 225

Query: 355 VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV 534
           VLD   G + +  A  F   VG TG +LTKLDG ARGG  +SV +  G+P+ F   GE +
Sbjct: 226 VLDAMIGQDAVTTAAAFGAGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFATTGEKL 285

Query: 535 EDLQPFDAEAFVEAI 579
           +D   F  +     I
Sbjct: 286 DDFDVFHPDRMASRI 300



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>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)|
          Length = 445

 Score =  106 bits (265), Expect = 4e-23
 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEI---VIDNDKKAQA 183
           GKTT+ GKLA  +K +G KV + A D +R AA DQL     + G +I   V        A
Sbjct: 107 GKTTTAGKLALFYKKKGYKVGLVAADVYRPAAYDQLV----QIGKQINVPVYGEPNNTDA 162

Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 363
             +  + V++   E +DI++ DT+GR    +G  EE+   +++        P+E++LV+D
Sbjct: 163 VGIAKRGVEKFLSEKYDIIIVDTAGR----HGYGEEVKLLEEMKNMYSEIKPDEVILVID 218

Query: 364 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDL 543
            + G      A  F+    I   I+TK+DGTA+GG  +S V   G  +KF+G GE +++L
Sbjct: 219 ASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGALSAVAATGAAIKFIGTGEKLDEL 278

Query: 544 QPFDAEAFVEAI 579
           + F+   FV  I
Sbjct: 279 EVFNPRRFVSRI 290



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>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)|
          Length = 447

 Score =  106 bits (264), Expect = 6e-23
 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+ GKLA+ +K  G KV + A D +R AA DQL     + G ++    +   Q P  
Sbjct: 108 GKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVY--GEPNNQNPIE 165

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + V    +   DI++ DT+GR    YG   +L+   K +   L   P++++LV+D +
Sbjct: 166 IAKKGVDIFVKNKMDIIIVDTAGR--HGYGEETKLLEEMKEMYDVLK--PDDVILVIDAS 221

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G      A  F+    I   I+TK+DGTA+GG  +S V   G  +KF+G GE +++L+ 
Sbjct: 222 IGQKAYDLASRFHQASPIGSVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELET 281

Query: 550 FDAEAFVEAI 579
           F+A+ FV  I
Sbjct: 282 FNAKRFVSRI 291



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>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)|
          Length = 433

 Score =  106 bits (264), Expect = 6e-23
 Identities = 66/189 (34%), Positives = 99/189 (52%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA      G KV +   DT R AA DQL   AE+ G     + D K  A  +
Sbjct: 111 GKTTTAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGK-DAVEI 169

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + V+  K    D+++ DT+GR      L++E+ +    ++      P+E++LV+D T 
Sbjct: 170 AKRGVQNFKN--MDVIIVDTAGRHRNEEALLKEVRAIYDAVS------PDEVVLVIDATV 221

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QA+ F   + I   I+TK+D TARGG  ++ V + G  VKF+GVGE V++ + F
Sbjct: 222 GKMAAAQAEAFMKYLPIHSVIITKMDSTARGGGALAAVAKTGAKVKFIGVGEDVDEFEQF 281

Query: 553 DAEAFVEAI 579
               FV  +
Sbjct: 282 SPRKFVARV 290



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>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog|
          Length = 556

 Score =  105 bits (261), Expect = 1e-22
 Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERT-----GSEIVIDNDKKA 177
           GKTTS  KLA  +K  G KV +   DTFRA A DQL+  A +      GS +  D  K  
Sbjct: 130 GKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYYGSYLEPDPVK-- 187

Query: 178 QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLV 357
               +  + V++ K+E FDI++ DTSGR      L  E+V   + +       P + ++V
Sbjct: 188 ----IAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQ------PTQTIMV 237

Query: 358 LDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE 537
           +DG+ G     QA+ F +       ILTK+DG A+GG  +S V     P+ F+G GE V 
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297

Query: 538 DLQPFDAEAFVEAI 579
           DL+ F    F+  +
Sbjct: 298 DLEIFKPTTFISKL 311



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>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 536

 Score =  104 bits (260), Expect = 2e-22
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTTS  KLA  ++  G KV +   DTFRA A DQL+     T ++I          P +
Sbjct: 115 GKTTSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLK--QNATKAKIPFFGSYTETDPVA 172

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           V ++ V + K+E F+I++ DTSGR      L  E+V     +       P+  ++VLD +
Sbjct: 173 VAAEGVAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVK------PDSTIMVLDAS 226

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     Q++ F D       ILTK+DG A+GG  +S V     P+ F+G GE + DL+ 
Sbjct: 227 IGQAAEPQSRAFKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEA 286

Query: 550 FDAEAFVEAI 579
           F  + F+  +
Sbjct: 287 FSPKQFISKL 296



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>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 495

 Score =  104 bits (259), Expect = 2e-22
 Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K A+  + +G K  +   DTFRA A DQL+     T S+I          P  
Sbjct: 113 GKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLK--QNATKSKIPYYGSYTGSDPVK 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + V R K+E  D+++ DTSGR      L EE+    + I++A    P+ ++ V+D +
Sbjct: 171 IAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEM----RQISEATK--PDLVIFVMDSS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G    +QA+ F   V +   I+TK+DG A+GG  +S V     PV F+G GE +++ + 
Sbjct: 225 IGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEV 284

Query: 550 FDAEAFVEAI 579
           FDA+ FV  +
Sbjct: 285 FDAKPFVSRL 294



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>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 522

 Score =  103 bits (256), Expect = 5e-22
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA  ++  G K  + A DTFRA A DQL+  A +  + +          P V
Sbjct: 113 GKTTTCSKLALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIK--ARVPYFGSYTETDPVV 170

Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           ++ + V + K + FD+++ DTSGR      L  E+V     I       P++ +++LD +
Sbjct: 171 IAKEGVDKFKNDRFDVIIVDTSGRHQQEQELFAEMVEISDAIR------PDQTIMILDAS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     Q+K F +       I+TKLDG A+GG  +S V     P+ F+G GE + DL+ 
Sbjct: 225 IGQAAESQSKAFKETADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLER 284

Query: 550 FDAEAFVEAI 579
           F   +F+  +
Sbjct: 285 FSPRSFISKL 294



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>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)|
          Length = 441

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/189 (33%), Positives = 101/189 (53%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+ GKLA+ +   G KV + + DT R  A +QL+  AE  G+  +   +++     +
Sbjct: 108 GKTTTAGKLAYYYVRRGYKVGLVSSDTHRPGAYEQLKRLAEEAGA--MFYGEREGDPAEI 165

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
             + ++     G +IV+ DT+GR    +G  EE     ++ A A    P+E+ LV+D + 
Sbjct: 166 ARRGLEDLLSRGAEIVIVDTAGR----HGHGEEARLLDEMKAIASKVRPDEVALVIDASI 221

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G   +  A+ F+    I   I+TK+DGTARGG  ++     G  +KF+G GE + +L+PF
Sbjct: 222 GQKAMGLAERFHKSTPIGSIIVTKMDGTARGGGALTAAAVTGARIKFIGTGETLGELEPF 281

Query: 553 DAEAFVEAI 579
               FV  I
Sbjct: 282 APRRFVARI 290



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>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 479

 Score =  101 bits (251), Expect = 2e-21
 Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K A+  + +G K  +   DTFRA A DQL+     T ++I          P  
Sbjct: 113 GKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLK--QNATKAKIPFYGSYTESDPVK 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + V R K+E  D+++ DTSGR      L EE+    + +A+A    P+ ++ V+D +
Sbjct: 171 IAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEM----RQVAEATE--PDLVIFVMDSS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G    +QA+ F + V +   I+TK+DG A+GG  +S V     PV F+G GE +++ + 
Sbjct: 225 IGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284

Query: 550 FDAEAFVEAI 579
           FD + FV  +
Sbjct: 285 FDVKPFVSRL 294



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>SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54)|
          Length = 465

 Score =  100 bits (250), Expect = 2e-21
 Identities = 60/189 (31%), Positives = 102/189 (53%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  K+A  F  +G +  +   DTFR  A DQ +   ER  +E+    D     P  
Sbjct: 109 GKTTTSAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCER--AEVDFYGDPDCDDPVQ 166

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +++       +  D+ + DT+GR      L++E+   + V+       P+  LLVLD   
Sbjct: 167 IAREGLEATEDA-DVHIVDTAGRHALEDDLIDEIEEIEGVVQ------PDLNLLVLDAAI 219

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G    +QA++F++ +GI G ++TKLDGTA+GG  ++ V+E    + F+G+GE V+D++ F
Sbjct: 220 GQGAKEQAQQFDESIGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERF 279

Query: 553 DAEAFVEAI 579
           +   F+  +
Sbjct: 280 EPNGFISRL 288



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>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 497

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K A+  + +G K  +   DTFRA A DQL+     T ++I          P  
Sbjct: 113 GKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLK--QNATKAKIPFYGSYMESDPVK 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + ++R ++E  D+++ DTSGR      L EE+    + +A+A    P+ ++ V+DG+
Sbjct: 171 IAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEM----RQVAEATK--PDLVIFVMDGS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QA+ F     +   I+TKLDG A+GG  +S V     PV F+G GE +++ + 
Sbjct: 225 IGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEI 284

Query: 550 FDAEAFVEAI 579
           FD + FV  +
Sbjct: 285 FDVKPFVSRL 294



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>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 497

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K A+  + +G K  +   DTFRA A DQL+     T ++I          P  
Sbjct: 113 GKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLK--QNATKAKIPFYGSYMESDPVK 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + ++R ++E  D+++ DTSGR      L EE+    + +A+A    P+ ++ V+DG+
Sbjct: 171 IAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEM----RQVAEATK--PDLVIFVMDGS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QA+ F     +   I+TKLDG A+GG  +S V     PV F+G GE +++ + 
Sbjct: 225 IGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEI 284

Query: 550 FDAEAFVEAI 579
           FD + FV  +
Sbjct: 285 FDVKPFVSRL 294



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>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog|
          Length = 534

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  KLA  ++  G K  +   DTFRA A DQL+     T ++I          P++
Sbjct: 114 GKTTTCTKLARHYQMRGFKTALVCADTFRAGAFDQLK--QNATKAKIPYYGSLTQTDPAI 171

Query: 193 LS-QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           ++ + V + K+E F+I++ DTSGR      L  E+   +  +       P++ +LVLD T
Sbjct: 172 VAAEGVAKFKKERFEIIIVDTSGRHKQEEELFTEMTQIQTAVT------PDQTILVLDST 225

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     Q+  F         I+TK DG A GG  +S V     P+ ++G GE + DL+ 
Sbjct: 226 IGQAAEAQSSAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLER 285

Query: 550 FDAEAFVEAI 579
           F+ +AF++ +
Sbjct: 286 FEPKAFIQKL 295



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>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)|
          Length = 493

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K AH  + +G K  +   DTFRA A DQL+     T ++I          P  
Sbjct: 112 GKTTTCTKYAHYHQRKGFKPSLVCADTFRAGAFDQLK--QNATKAKIPFYGSYMESDPVK 169

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + +++ ++E  D+++ DTSGR      L EE+    + +A+A    P+ ++ V+DG+
Sbjct: 170 IAVEGLEKFRQEKSDLIIIDTSGRHMQEAALFEEM----RQVAEATK--PDLVIFVMDGS 223

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QA+ F     +   I+TKLDG A+GG  +S V     PV F+G GE ++D   
Sbjct: 224 IGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDV 283

Query: 550 FDAEAFV 570
           F+ E FV
Sbjct: 284 FNVEPFV 290



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>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)|
          Length = 495

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K A+  + +G K  +   DTFRA A DQL+     T ++I          P  
Sbjct: 113 GKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLK--QNATKAKIPFYGSYTESDPVK 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +  + V   K+E  D+++ DTSGR      L EE+    + +A+A    P+ ++ V+D +
Sbjct: 171 IAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEM----RQVAEATK--PDLVIFVMDSS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QA+ F   V +   I+TK+DG A+GG  +S V     PV F+G GE +++ + 
Sbjct: 225 IGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284

Query: 550 FDAEAFVEAI 579
           FD + FV  +
Sbjct: 285 FDVKPFVSRL 294



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>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 496

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 59/189 (31%), Positives = 97/189 (51%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  K A+  +  G K  +   DTFRA A DQL+  A +        +  ++    +
Sbjct: 113 GKTTTCTKYAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKI 172

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
               V+  K+E  D+++ DTSGR      L EE+    + +++A    P+ ++ V+D + 
Sbjct: 173 AVDGVETFKKENCDLIIVDTSGRHKQEAALFEEM----RQVSEAQK--PDLVIFVMDSSI 226

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G     QA+ F   V +   I+TK+DG A+GG  +S V     PV F+G GE +++ + F
Sbjct: 227 GQAAFDQAQAFRQSVAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVF 286

Query: 553 DAEAFVEAI 579
           D + FV  +
Sbjct: 287 DVKPFVSRL 295



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>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 499

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP-S 189
           GKTT+  K A+  + +G K  +   DTFRA A DQL+     T ++I          P  
Sbjct: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLK--QNATKAKIPFYGSYTESDPVK 170

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 369
           +    V+  K+E  D+++ DTSGR      L EE+    + +A+A    P+ ++ V+D +
Sbjct: 171 IAVDGVETFKKENCDLIIVDTSGRHKQEAALFEEM----RQVAEATK--PDLVIFVMDSS 224

Query: 370 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 549
            G     QA+ F   V +   I+TK+DG A+GG  +S V     PV F+G GE +++ + 
Sbjct: 225 IGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284

Query: 550 FDAEAFVEAI 579
           FD + FV  +
Sbjct: 285 FDVKPFVSRL 294



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>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)|
          Length = 444

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+ GKLA  +K +G KV + A D +R AA +QL    ++    +  +   K     +
Sbjct: 107 GKTTTSGKLALFYKKKGYKVGLVAADIYRPAAYEQLIQIGQQINIPVYGEPGNKNPI-EI 165

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYG----LMEELVSCKKVIAKALPGAPNEILLVL 360
            +  +++  +E  +IV+ DT+GR    YG    L+EE+ S    I       P+E++LV+
Sbjct: 166 ATNGLEKFLKEKMNIVIIDTAGR--HGYGEEASLLEEMKSMYDKIH------PDEVILVI 217

Query: 361 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 540
           D + G      A  F+    I   I++K+DGTA+GG  +S V   G  +KF+G GE +++
Sbjct: 218 DASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALSAVIATGAQIKFIGTGEKLDE 277

Query: 541 LQPFDAEAFVEAI 579
           L+ F+   FV  +
Sbjct: 278 LEVFNPRRFVSRL 290



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>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)|
          Length = 460

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 59/189 (31%), Positives = 101/189 (53%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+  K+A  F  +G +  +   DTFR  A +Q    A+R  +E+    +  +  P  
Sbjct: 109 GKTTTAAKMAWWFSKKGLRPAIVQTDTFRPGAYEQAAEMADR--AEVDFYGEPDSDDPVQ 166

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
           +++       +  D+ + DT+GR      L+ E+   + V+       P+  LLVLD   
Sbjct: 167 IARDGLAATADA-DVHIVDTAGRHALEDDLIAEIEEIEGVVE------PDRSLLVLDAAI 219

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 552
           G    QQA++F+  +GI G  +TKLDGTA+GG  ++ V+E    + F+G GE V+D++ F
Sbjct: 220 GQGAKQQARQFDASIGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERF 279

Query: 553 DAEAFVEAI 579
           + ++F+  +
Sbjct: 280 EPDSFISRL 288



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>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog|
            (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 621

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 28/217 (12%)
 Frame = +1

Query: 13   GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAE------------------- 135
            GK+T+L KLA        KVL+ A DTFR+ A +QL +  E                   
Sbjct: 409  GKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRG 468

Query: 136  RTGSEIV----IDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSC 303
            +TG++ V               +  QA+K  + + FDIVL DT+GR H +  LM  L S 
Sbjct: 469  KTGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSF 528

Query: 304  KKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVG----ITGFILTKLDGTARG-G 468
                  A    P++I++V +   G + +QQAK FND  G    +  FI++K D      G
Sbjct: 529  ------ADQAKPDKIIMVGEALVGTDSVQQAKNFNDAFGKGRNLDFFIISKCDTVGEMLG 582

Query: 469  CVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579
             +V++V   GIP+ FVGVG+   DL+    +  V  +
Sbjct: 583  TMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTL 619



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>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNE-GAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           GKTT+  KL    + +   KV++ + D +R AA  QL++ +++        N+   Q+P 
Sbjct: 112 GKTTTTAKLGQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNN--TQSPK 169

Query: 190 -VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
            ++  A++  K + +D++L DT+GRL  +  +M EL+    +        P E   V D 
Sbjct: 170 DIVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNI------SHPIETFFVADA 223

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQ 546
             G + +    EFN  + ++ FI+TK D   R G ++S+      P+KF+G GE +E+L+
Sbjct: 224 MFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELE 283

Query: 547 PF 552
            F
Sbjct: 284 LF 285



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>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit|
            (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 636

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
 Frame = +1

Query: 13   GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWA---------ERTGSEIVIDN 165
            GK+T+L K++      G  VL+AA DTFRA A +QL             E+ G   ++  
Sbjct: 428  GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQL 487

Query: 166  DKKA---QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336
             +K     A  +  +A+   + +GFD+VL DT+GR+  N  LM  L     V        
Sbjct: 488  FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NT 541

Query: 337  PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483
            P+ +L V +   G   + Q  +FN  +           I G +LTK D    + G  +S+
Sbjct: 542  PDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISM 601

Query: 484  VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579
                  P+ FVG G+   DL+  +A+A V A+
Sbjct: 602  TYITSKPIVFVGTGQTYCDLRSLNAKAVVAAL 633



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>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit|
            (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 638

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
 Frame = +1

Query: 13   GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWA---------ERTGSEIVIDN 165
            GK+T+L K++      G  VL+AA DTFRA A +QL             E+ G   ++  
Sbjct: 430  GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQL 489

Query: 166  DKKA---QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336
             +K     A  +  +A+   + +GFD+VL DT+GR+  N  LM  L     V        
Sbjct: 490  FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NT 543

Query: 337  PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483
            P+ +L V +   G   + Q  +FN  +           I G +LTK D    + G  +S+
Sbjct: 544  PDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISM 603

Query: 484  VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579
                  P+ FVG G+   DL+  +A+A V A+
Sbjct: 604  TYITSKPIVFVGTGQTYCDLRSLNAKAVVAAL 635



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>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit|
            (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 638

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
 Frame = +1

Query: 13   GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAER----------TGSEIV-- 156
            GK+T+L K++      G  VL+AA DTFRA A + +     R           G  +V  
Sbjct: 430  GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQL 489

Query: 157  IDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336
             +      A  +  +A+   + +GFD+VL DT+GR+  N  LM  L     V        
Sbjct: 490  FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NT 543

Query: 337  PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483
            P+ +L V +   G   + Q  +FN  +           I G +LTK D    + G  +S+
Sbjct: 544  PDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISM 603

Query: 484  VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579
                  P+ FVG G+   DL+  +A+A V A+
Sbjct: 604  TYITSKPIVFVGTGQTYCDLRSLNAKAVVAAL 635



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>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog|
            (SR-alpha) (Docking protein alpha) (DP-alpha)
            (GTP-binding protein)
          Length = 614

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
 Frame = +1

Query: 13   GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIW----------AERTGSEIV-- 156
            GK+T+L K+          VL+AA DTFRA A +QL             A+  G  +V  
Sbjct: 407  GKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQL 466

Query: 157  IDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGA 336
             +      A  +  +A+K       D+VL DT+GR+  N  LM  L    KV        
Sbjct: 467  YEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKV------NN 520

Query: 337  PNEILLVLDGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSV 483
            P+ +L V +   G   + Q  +FN  +           I G +LTK D    + G  +S+
Sbjct: 521  PDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISM 580

Query: 484  VDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579
                G P+ FVG G+   DL+  +  A V ++
Sbjct: 581  TYITGQPIVFVGTGQTYADLKAINVNAVVNSL 612



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>FLHF_AQUAE (O67266) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 373

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 52/176 (29%), Positives = 86/176 (48%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSV 192
           GKTT+L KLAH FK    KV + + D FR  A +QL+ +A     E++    K A +P  
Sbjct: 184 GKTTTLAKLAHLFKKNKKKVGIISLDCFRVGAFEQLKAFA-----EVLEVPFKLADSPRA 238

Query: 193 LSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT 372
            +  ++  + +  D++L DT+GR H +   ++EL +  KV       +   + L L    
Sbjct: 239 FN--IQLLEMDDRDVILVDTAGRSHYDVIRLKELETYFKV-------SDISVYLTLAANL 289

Query: 373 GLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 540
              ++ +A     +  I+G I TKLD T   G +V+V      PV    +G+ + +
Sbjct: 290 SELVMYEAIMQFGMFSISGLIFTKLDETPYPGSMVNVAYRTQYPVVCFTMGQSIPE 345



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>FLHF_HELPJ (Q9ZM34) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 455

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAK---VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQA 183
           GKTT+L KLA R+    AK   V +   D +R  A +QL  +A +    I    D K  A
Sbjct: 264 GKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVIDAKDFA 323

Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 363
             + +        E  D +L DT+G  H+ Y   E++   K+ I     G   ++ LVL 
Sbjct: 324 KEIEAL-------EYCDFILVDTTG--HSQYD-KEKIAGLKEFIDG---GYNIDVSLVLS 370

Query: 364 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE-D 540
            TT    ++   +   V+GI   I TKLD +   G + S+V E   P+ ++ VG+ V  D
Sbjct: 371 VTTKYEDMKDIYDSFGVLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMD 430

Query: 541 LQPFDAEAFVEAI 579
           L+    E  V+ +
Sbjct: 431 LKVATNEYLVDCM 443



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>FLHF_HELPY (O25679) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 459

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFKNEGAK---VLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQA 183
           GKTT+L KLA R+    AK   V +   D +R  A +QL  +A +    I    D K  A
Sbjct: 268 GKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVIDAKDFA 327

Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 363
             + +        E  D +L DT+G  H+ Y   E++   K+ I     G   ++ LVL 
Sbjct: 328 KEIEAL-------EYCDFILVDTTG--HSQYD-KEKIAGLKEFIDG---GYNIDVSLVLS 374

Query: 364 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE-D 540
            TT    ++   +   V+GI   I TKLD +   G + S+V E   P+ ++ VG+ V  D
Sbjct: 375 VTTKYEDMKDIYDSFGVLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMD 434

Query: 541 LQPFDAEAFVEAI 579
           L+    E  V+ +
Sbjct: 435 LKVATNEYLVDCM 447



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>FLHF_BACSU (Q01960) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 366

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 13  GKTTSLGKLAH-RFKNEGAKVLMAAGDTFRAAARDQLEIWAE--RTGSEIVIDNDKKAQA 183
           GKTT+L KLA      +  K+     DT+R AA +QL+ +AE  +   E+    ++  QA
Sbjct: 187 GKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPLEVCYTKEEFQQA 246

Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPN-EILLVL 360
             + S+         +D V  DT+GR   +   ++EL        + +P   + +  LVL
Sbjct: 247 KELFSE---------YDHVFVDTAGRNFKDPQYIDEL-------KETIPFESSIQSFLVL 290

Query: 361 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV-E 537
             T     ++   +    V +  +I TK+D T   G V +++ E  I V F+  G+ V E
Sbjct: 291 SATAKYEDMKHIVKRFSSVPVNQYIFTKIDETTSLGSVFNILAESKIGVGFMTNGQNVPE 350

Query: 538 DLQPFDAEAFVEAI 579
           D+Q      FV  +
Sbjct: 351 DIQTVSPLGFVRML 364



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>FLHF_CAMJE (O52908) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 484

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRFK--NEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP 186
           GKTT+L KLA R+   ++  K  +   DT+R  A +QL  +A+     I+   +     P
Sbjct: 294 GKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQYAKMMKLPIIDSIE-----P 348

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
             L +A+K       +++L DT G    +     +L   K+ +  +   A  ++ LV+  
Sbjct: 349 KDLDEAIK--SLNNCEVILVDTIGNSQYD---QSKLAKTKEFLMHS--NAEIDVNLVVSA 401

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV-EDL 543
            T    L +  +    + I   I+TK D T   G + S+V E  IP+ F  +G+ V +DL
Sbjct: 402 NTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSFFSIGQEVPDDL 461

Query: 544 QPFDAEAFVEAI 579
           +  +++  V  I
Sbjct: 462 EVANSDFLVHCI 473



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>FLHF_TREPA (Q56339) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 437

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
 Frame = +1

Query: 13  GKTTSLGKLAHRF-----KNEGA--KVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDK 171
           GKTT+L KLA  +     K  G   +V +   D FR  A  Q+E + E  G ++ +    
Sbjct: 229 GKTTTLAKLAAFYFVTEPKRTGIQPRVKIITTDNFRIGAAFQMERYCELMGLDLCV---- 284

Query: 172 KAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEIL 351
             QAP      +   ++E  D+V  DT GR   +   +E +V       +A+     E+ 
Sbjct: 285 -VQAPVEFLTYMTLYQQE-TDVVFVDTEGRSPVDGQNIERMVE----YFRAVKNFELEVY 338

Query: 352 LVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEG 531
           L +D  +  N L++  +   +      I+TKLD T   G ++S + E   P+ ++  G+ 
Sbjct: 339 LTIDAGSKANDLREVFKQYALFEYRALIVTKLDETTSIGNLISALSEARTPITYITTGQT 398

Query: 532 V 534
           V
Sbjct: 399 V 399



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>FLHF_PSEPU (O52256) Flagellar biosynthesis protein flhF (Flagella-associated|
           GTP-binding protein)
          Length = 437

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
 Frame = +1

Query: 13  GKTTSLGKLAHRF--KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP 186
           GKTT+L KLA R+  K     + + + D+FR  A++QL+         +   +  ++ A 
Sbjct: 230 GKTTTLAKLAARYVLKYGAQNLALVSMDSFRIGAQEQLKTLGRILNVPVTYVDPGQSLAA 289

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDG 366
           ++     KR       +VL DT+G   ++  L  +L +       A  G   +  LVL  
Sbjct: 290 ALEPLLRKR-------VVLIDTAGLQASDPALRMQLETL------AGRGIAAKNYLVLAT 336

Query: 367 TTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 540
           T+   +L  A       G+ G ILTKLD TA  G V+S+     +PV ++  G  + D
Sbjct: 337 TSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGDVLSLAISHELPVAYLTDGPRIPD 394



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>VIRC1_AGRTU (P06665) Protein virC1|
          Length = 231

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
 Frame = +1

Query: 4   GTRGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVID---NDKK 174
           G  GKTT+L  L     N+G +V +   D  R   R     W E        D       
Sbjct: 11  GGAGKTTALMGLCAALANDGKRVALFDADENRPLTR-----WRENALQSSTWDPRCEVYS 65

Query: 175 AQAPSVLSQAVKRGKREGFDIVLCDTSG 258
           A    +L  A +  + EGFD  L DT G
Sbjct: 66  ADEMPLLEAAYENAELEGFDYALADTRG 93



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>HIS6_METMA (Q8PW92) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 273

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
 Frame = +1

Query: 34  KLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKR 213
           +LA R+  +GA  L+    T  A  R+ +    ERT  E+ I         S+  +A+++
Sbjct: 38  ELAKRYNEDGADELVFLDITASAHGRETMIDVIERTADEVFIPLTVGGGISSI--EAIRQ 95

Query: 214 GKREGFDIVLCDTSGRLHTNY----------GLMEELVSCK----------KVIAKALPG 333
             R G D V  +TS   +  +            +   + CK          K I +   G
Sbjct: 96  ILRAGADKVSVNTSAVKNPEFIKESSDIFGAQCIVTAIDCKRNTNVKDNPDKTILELEDG 155

Query: 334 APNEILLVLDG---TTGLNMLQQAKEFNDVVGITGFILTKL--DGTARGGCVV---SVVD 489
            P    +V+ G    TG++ +Q AK   + +G    +LT +  DGT  G  +     + +
Sbjct: 156 TPAWYEVVIYGGRKNTGIDAVQWAKRAEE-LGSGEILLTSMDRDGTCAGYDIPITRKLSE 214

Query: 490 ELGIPV 507
           EL IP+
Sbjct: 215 ELDIPI 220



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>ENGA_AQUAE (O67749) GTP-binding protein engA|
          Length = 433

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
 Frame = +1

Query: 226 GFDIVLCDTSGRL-HTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQ--A 396
           G + ++ DT G +  T   L+ E+   KKV+ + +P A + IL V+DG  GLN L Q  A
Sbjct: 49  GKEFIIVDTGGLVPETKDELIREV---KKVVEQEIPKA-DVILFVVDGKEGLNPLDQEIA 104

Query: 397 KEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKF-------VGVGEGVEDLQPFD 555
           K           ++ K+D   +   V      LG    F        GVGE ++++  + 
Sbjct: 105 KYLYPYADKVLLVVNKIDNLRQEKNVAEFY-TLGFEKIFPISAQHGKGVGELLDEVVKYL 163

Query: 556 AEAFVEAI 579
            E  VE +
Sbjct: 164 KEEKVETV 171



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>JHD3C_HUMAN (Q9H3R0) JmjC domain-containing histone demethylation protein 3C|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2C)
           (Gene amplified in squamous cell carcinoma 1 protein)
           (GASC-1 protein)
          Length = 1056

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +3

Query: 408 RCCWNHRIHSD----EARRHCSWWLCGERRRRTWNSSQVCWCRRRGG 536
           +CC   R+H+      +   C  WLC   +R  W +++ C C  RGG
Sbjct: 720 KCCV--RVHASCYGIPSHEICDGWLCARCKRNAW-TAECCLCNLRGG 763



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>LPXK_XANOR (Q5H0H1) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 346

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +1

Query: 52  KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGF 231
           ++E  K      DT  A   D+  + A +TG+ + +D+D+ A A +++          G 
Sbjct: 95  RDEAGKARWVEADTPVALGGDEPVLIAWKTGARVRVDSDRLAAARALV--------EAGC 146

Query: 232 DIVLCD 249
           DIV+CD
Sbjct: 147 DIVICD 152



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>LPXK_XANOM (Q2P3E8) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 346

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +1

Query: 52  KNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGF 231
           ++E  K      DT  A   D+  + A +TG+ + +D+D+ A A +++          G 
Sbjct: 95  RDEAGKARWVEADTPVALGGDEPVLIAWKTGARVRVDSDRLAAARALV--------EAGC 146

Query: 232 DIVLCD 249
           DIV+CD
Sbjct: 147 DIVICD 152



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>URAA_PASMU (Q9CPL9) Probable uracil permease (Uracil transporter)|
          Length = 417

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 412 VVGITGFILTKLDGT-ARGGCVVSVVDELGIPVKFVGVGE 528
           VVG++  I  K+D T AR  C++SVV   GI   FV  GE
Sbjct: 346 VVGMSTLIRGKVDVTEARNLCIISVVMTFGIGGMFVNFGE 385



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>JHD3C_MOUSE (Q8VCD7) JmjC domain-containing histone demethylation protein 3C|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2C)
          Length = 1054

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 456 CSWWLCGERRRRTWNSSQVCWCRRRGG 536
           C  WLC   +R  W +++ C C  RGG
Sbjct: 736 CDGWLCARCKRNAW-TAECCLCNLRGG 761



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>Y830_CORDI (Q6NIE7) Hypothetical transport protein DIP0830|
          Length = 541

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
 Frame = +1

Query: 4   GTRGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQA 183
           G  G   ++G  A  F+ +  +    AG         Q+++    TGS++VID       
Sbjct: 166 GVLGVIAAIGLCAKWFRIDHVQEAHDAGVAVEDLFTRQIKVNHVVTGSDLVIDIHHTLGL 225

Query: 184 PSVLSQAVKRGKREGFDIVLCDTSGRLHTN-----YGLMEELVSCKKVIAKALPGAP 339
             ++S+  + G++      L   S R+H        G  EEL     V+   LPG P
Sbjct: 226 EIIVSRIERDGQQ-----TLPTASSRIHMGDVLSVVGTAEELDKAAHVLGDLLPGDP 277



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>RPC1A_CHLRE (Q8HUG9) DNA-directed RNA polymerase beta' chain N-terminal subunit|
           (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'
           N-terminal section) (RNA polymerase beta' N-terminal
           section)
          Length = 603

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   FGTRG--KTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERT 141
           FGT+    T  + K+ H+F+N  +K+      T   A+ +++  WAE+T
Sbjct: 193 FGTKNIVNTLQIKKIVHKFENSYSKLTEINLITINLASANRIRQWAEKT 241



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>URAA_HAEIN (P45117) Probable uracil permease (Uracil transporter)|
          Length = 414

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 412 VVGITGFILTKLDGT-ARGGCVVSVVDELGIPVKFVGVG 525
           VVG++  I  K+D T AR  C++SVV   GI   FV VG
Sbjct: 347 VVGMSTLIRGKVDVTEARNLCIISVVMTFGIGNMFVDVG 385



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>HSP75_KLUDE (Q707W3) Heat shock protein SSB|
          Length = 612

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
 Frame = +1

Query: 46  RFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKRE 225
           R  +E  + ++   + F+AA     +    +   E  + + ++     VLS  +KRG + 
Sbjct: 512 RLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKT 571

Query: 226 GFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327
             +  L D    L    G  EE     V  K+V+ KA+
Sbjct: 572 KIEAALADALAALQIEDGSTEEYRKAEVGLKRVVTKAM 609



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>HSP75_CANGA (Q876N3) Heat shock protein SSB|
          Length = 612

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
 Frame = +1

Query: 46  RFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKRE 225
           R  +E  + ++   + F+AA     +    +   E  + + ++     VLS  +KRG + 
Sbjct: 512 RLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKT 571

Query: 226 GFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327
             +  L D    L    G  EE     V  K+V+ KA+
Sbjct: 572 KIEAALADALSALQIEDGSAEEYRKAEVGLKRVVTKAM 609



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>HIS6_METAC (Q8TT96) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 273

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
 Frame = +1

Query: 34  KLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKR 213
           +LA R+  +GA  L+    T  A  R+ +    ERT  E+ I         S+   A+++
Sbjct: 38  ELAKRYNEDGADELVFLDITASAHGRETMIDVIERTADEVFIPLTVGGGISSI--DAIRQ 95

Query: 214 GKREGFDIVLCDTSGRLHTNY----------GLMEELVSCK----------KVIAKALPG 333
             R G D V  +TS   + ++            +   + C+          K + +   G
Sbjct: 96  ILRAGADKVSVNTSAVKNPDFIKESSDIFGAQCIVTAIDCRRNTDIKNNPDKTVLELEDG 155

Query: 334 APNEILLVLDG---TTGLNMLQQAKEFNDVVGITGFILTKL--DGTARG---GCVVSVVD 489
            P    +V+ G    TG++ +Q AK+  + +G    +LT +  DGT  G        + +
Sbjct: 156 TPAWYEVVIYGGREATGIDAVQWAKKAEE-LGSGEILLTSMDRDGTCAGYDLPITRKLSE 214

Query: 490 ELGIPV 507
           EL IP+
Sbjct: 215 ELDIPI 220



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>ISPG_XYLFA (Q9PAE3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 417

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 100 AAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTN-Y 276
           A+ +   E+W  R GSE+V      AQ+ + + +  +R    G D+ L    G  H N +
Sbjct: 49  ASTKQVAELW--RAGSEMVRLTVNNAQSAAAIPRIAERLAMMGIDVPLI---GDFHYNGH 103

Query: 277 GLMEELVSCKKVIAK 321
            L+ +  +C +V+AK
Sbjct: 104 QLLADEPACAEVLAK 118



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>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -1

Query: 350 KISLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 204
           K S+G      AM FLQE NS +   FV   P+  +   ++PS F RFT
Sbjct: 78  KCSIGKNRAQAAMEFLQELNSDVSGSFVEESPE--NLLDNDPSFFCRFT 124



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>HIS6_METBF (Q46CC5) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 273

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 28/186 (15%)
 Frame = +1

Query: 34  KLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKR 213
           +LA R+  EGA  L+    T  A  R  +    ERT  E+ I         S+   A+++
Sbjct: 38  ELAKRYNEEGADELVFLDITASAQGRKTMIDVIERTADEVFIPLTIGGGINSI--DAIRQ 95

Query: 214 GKREGFDIVLCDTSGRLHTNY----------GLMEELVSCK----------KVIAKALPG 333
             R G D V  +TS   + ++            +   + C+          K I +   G
Sbjct: 96  ILRAGADKVSVNTSAVKNPDFIKESSDIFGAQCIVTAIDCRRNTDIKNNPDKTILELEDG 155

Query: 334 APNEILLVLDG---TTGLNMLQQAKEFNDVVGITGFILTKL--DGTARG---GCVVSVVD 489
            P    +V+ G    TG++ +Q A++  + +G    +LT +  DGT  G        + +
Sbjct: 156 TPAWYEVVIYGGREATGIDAVQWARKAEE-LGSGEILLTSMDRDGTCAGYDLPITKKLSE 214

Query: 490 ELGIPV 507
           EL IP+
Sbjct: 215 ELDIPI 220



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>ILVD_PYRAE (Q8ZYU6) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 562

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
 Frame = +1

Query: 40  AHRFKNEG-AKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS------VLS 198
           A R K EG AKV  +  + F+A A  ++     + G  +VI  +    AP       + +
Sbjct: 400 AERLKFEGRAKVYDSEAEAFKAVASGEI-----KAGDVVVIRYEGPKGAPGMPEMLKITA 454

Query: 199 QAVKRGKREGFDIVLCDTSGRLH-TNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTG 375
             V  G  E   +V   T GR      G+M   VS +  +   +    N   +V+DG  G
Sbjct: 455 AIVGAGLGE---VVALITDGRFSGATRGIMVGHVSPEAAVGGPIALVQNGDRIVIDGEAG 511

Query: 376 LNMLQQAKE 402
           L  L+  +E
Sbjct: 512 LLKLELGEE 520



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>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -1

Query: 350 KISLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 204
           K S+G      AM FLQE NS +   FV   P+  +   ++PS F RFT
Sbjct: 78  KSSIGKNRAQAAMEFLQELNSDVSGSFVEESPE--NLLDNDPSFFCRFT 124



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>METN_HAEIN (P44785) Probable D-methionine transport ATP-binding protein metN|
          Length = 345

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
 Frame = +1

Query: 313 IAKALPGAPNEILL-----VLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVV 477
           IA+AL   P  +L       LD  T  ++L+  KE N  +GIT  ++T      +  C  
Sbjct: 151 IARALASDPKVLLCDEATSALDPATTQSILKLLKEINRTLGITILLITHEMEVVKQICDQ 210

Query: 478 SVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 582
             V + G  V+   VGE   + +   A+ F+ + F
Sbjct: 211 VAVIDQGRLVEQGTVGEIFANPKTELAQEFIRSTF 245



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>PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)|
          Length = 607

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +1

Query: 406 NDVVGITGF-ILTKLDGTARGGCVVSVVDELGIPVKFVGVGEG--VEDL 543
           +D+   T F I T + G A     V V + LGI +K V +GEG  V+DL
Sbjct: 503 HDIAEGTRFTIFTGITGQAWADAAVRVAERLGIDLKAVVIGEGQPVQDL 551



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>GAL1_CLOPE (Q8XKP9) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 387

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +1

Query: 427 GFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 579
           G +  ++ G   GGC +++V+   +      VG+  +D   ++A  +V +I
Sbjct: 330 GVLGARMTGAGFGGCAIAIVNNAHVDEFIKNVGQAYKDAIGYEASFYVASI 380



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>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit|
           (Auxin-resistance protein AXR1)
          Length = 540

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -1

Query: 344 SLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 204
           S+G         FLQE N S+   F+   PD    T  NPS F +FT
Sbjct: 91  SVGQSKAKSVCAFLQELNDSVNAKFIEENPDTLITT--NPSFFSQFT 135



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>RSC30_YEAST (P38781) Chromatin structure remodeling complex protein RSC30|
           (Remodel the structure of chromatin complex subunit 30)
          Length = 883

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 343 H*EHQAGL*L*LSCKKPTLPSDRNLYEVVLTYHIEQYQILHASHVLLPAKELMEPVPS 170
           H +H++ L   LSC       D  L+  +   +  ++ +L  S  ++PA E + P+P+
Sbjct: 485 HDDHKSSLDEDLSCLLSFQIKDFKLFHFLKKMYYSRHSLLGQSSFMVPAAENLSPIPA 542



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>HSP76_YEAST (P40150) Heat shock protein SSB2|
          Length = 612

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
 Frame = +1

Query: 10  RGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           +    ++     R  +E  + ++   + F+AA     +    R   E  + + ++     
Sbjct: 500 KSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDP 559

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327
           VLS  +KRG +   +  L D    L       +EL    V  K+V+ KA+
Sbjct: 560 VLSSKLKRGSKSKIEAALSDALAALQIEDPSADELRKAEVGLKRVVTKAM 609



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>HSP75_YEAST (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101)|
          Length = 612

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
 Frame = +1

Query: 10  RGKTTSLGKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAPS 189
           +    ++     R  +E  + ++   + F+AA     +    R   E  + + ++     
Sbjct: 500 KSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDP 559

Query: 190 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327
           VLS  +KRG +   +  L D    L       +EL    V  K+V+ KA+
Sbjct: 560 VLSSKLKRGSKSKIEAALSDALAALQIEDPSADELRKAEVGLKRVVTKAM 609



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>HSP75_ASHGO (Q75E44) Heat shock protein SSB|
          Length = 612

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
 Frame = +1

Query: 13  GKTTSL--GKLAHRFKNEGAKVLMAAGDTFRAAARDQLEIWAERTGSEIVIDNDKKAQAP 186
           GKT ++       R  +E  + +++  + F+AA     +    R   E  + + ++  + 
Sbjct: 499 GKTANITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSD 558

Query: 187 SVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEEL----VSCKKVIAKAL 327
            VLS  +K+G +   +  L D    L       E+     +  K+V+ KA+
Sbjct: 559 PVLSAKMKKGAKSKVEAALADAFSALQIEESSAEDYRKAEIGLKRVVTKAM 609



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>MURD_THETN (Q8R9G4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 450

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 4   GTRGKTTSLGKLAHRFKNEGAKVLMA 81
           GT GKTT+   L   F+N G KV +A
Sbjct: 115 GTNGKTTTTSLLGEMFRNAGRKVYVA 140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,978,697
Number of Sequences: 219361
Number of extensions: 1726870
Number of successful extensions: 5590
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 5299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5421
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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