ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2n19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1110 bits (560), Expect = 0.0 Identities = 602/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120042 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 119984 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119983 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 119924 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119923 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 119864 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119863 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119804 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119803 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119744 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 119743 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 119685 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119684 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 119625 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119624 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 119565 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119564 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 119506 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119505 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 119448 Query: 602 gggaacggaa 611 |||||||||| Sbjct: 119447 gggaacggaa 119438 Score = 1110 bits (560), Expect = 0.0 Identities = 602/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94852 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 94910 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94911 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 94970 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94971 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 95030 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95031 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95090 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95091 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95150 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 95151 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 95209 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95210 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 95269 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 95329 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95330 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 95388 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95389 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 95446 Query: 602 gggaacggaa 611 |||||||||| Sbjct: 95447 gggaacggaa 95456
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118808 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 118749 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118748 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 118689 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118688 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 118629 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118628 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 118569 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118568 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 118509 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 118508 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 118450 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118449 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 118390 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118389 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 118330 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 118329 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 118272 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 118271 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 118219
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 119534 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119533 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119474 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119414 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 119413 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 119356 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119355 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 119303 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 95622 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95682 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95742 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 95743 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 95800 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 95801 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 95853
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 119534 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119533 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119474 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119414 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 119413 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 119356 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119355 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 119303 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 95622 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95682 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95742 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 95743 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 95800 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 95801 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 95853
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119782 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119781 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119722 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119721 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119662 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119602 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119601 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119542 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 119541 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 119483 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119423 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119363 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 119362 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 119305 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119304 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 119252 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95209 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95268 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95269 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95328 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95329 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95388 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95389 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95448 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95449 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95508 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 95509 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 95567 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95568 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95627 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95687 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 95688 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 95745 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 95746 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 95798
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507842 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31507901 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31507902 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31507961 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507962 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31508021 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508022 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31508081 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508082 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31508141 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 31508142 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 31508200 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508201 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 31508260 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508261 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 31508320 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 31508321 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 31508378 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 31508379 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 31508431
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84754 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84695 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84694 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 84635 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84634 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 84575 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84574 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 84515 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84514 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 84455 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 84454 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 84396 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84395 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 84336 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84335 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 84276 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 84275 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 84218 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 84217 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 84165
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119861 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119802 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119801 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119742 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119682 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119622 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119562 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 119561 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 119503 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119502 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119443 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119442 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119383 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 119382 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 119325 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119324 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 119272 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95257 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95316 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95317 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95376 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95377 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95436 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95437 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95496 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95497 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95556 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 95557 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 95615 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95616 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95675 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95676 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95735 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 95736 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 95793 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 95794 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 95846
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122306 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 122365 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122366 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 122425 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122426 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 122485 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122486 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 122545 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122546 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 122605 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 122606 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 122664 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122665 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 122724 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122725 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 122784 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 122785 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 122842 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 122843 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 122895 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14031 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 14090 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14091 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 14150 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14151 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 14210 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14211 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 14270 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14271 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 14330 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 14331 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 14389 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14390 atcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 14449 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14450 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 14509 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 14510 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 14567 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 14568 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 14620
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58580 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 58521 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58520 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 58461 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58460 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 58401 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58400 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 58341 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58340 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 58281 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 58280 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 58222 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58221 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 58162 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58161 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 58102 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 58101 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 58044 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 58043 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 57991
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268191 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9268250 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268251 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9268310 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268311 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9268370 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268371 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9268430 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268431 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9268490 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 9268491 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 9268549 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268550 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9268609 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268610 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9268669 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9268670 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 9268727 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9268728 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 9268780 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227691 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9227750 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227751 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9227810 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227811 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9227870 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227871 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9227930 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227931 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9227990 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 9227991 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 9228049 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228050 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9228109 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228110 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9228169 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9228170 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 9228227 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9228228 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 9228280 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164280 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9164339 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164340 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9164399 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164400 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9164459 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164460 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9164519 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164520 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9164579 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 9164580 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 9164638 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164639 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9164698 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164699 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9164758 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9164759 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 9164816 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9164817 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 9164869 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056105 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9056164 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056165 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9056224 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056225 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9056284 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056285 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9056344 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056345 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9056404 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 9056405 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 9056463 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056464 atcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9056523 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056524 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9056583 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9056584 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 9056641 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9056642 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 9056694 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 486 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 531 |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggg 25171408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938176 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19938235 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938236 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19938295 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938296 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19938355 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938356 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19938415 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938416 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19938475 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 19938476 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 19938534 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938535 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 19938594 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938595 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 19938654 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 19938655 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 19938712 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 19938713 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 19938765 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277255 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10277196 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10277195 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10277136 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277135 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10277076 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277075 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10277016 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277015 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10276956 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 10276955 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 10276897 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276896 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10276837 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276836 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 10276777 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 10276776 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 10276719 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10276718 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 10276666 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387043 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10387102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10387162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10387222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10387282 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10387342 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 10387343 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 10387401 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387402 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10387461 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387462 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 10387521 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 10387522 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 10387579 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10387580 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 10387632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 444 agtaccgtgagggaaaggtgaaaagaacccc 474 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 ttgtgctgctaggcgaagcggttgagtgc 296 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598358 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31598417 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598418 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31598477 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598478 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31598537 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598538 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31598597 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598598 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31598657 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 31598658 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 31598716 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598717 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 31598776 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598777 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 31598836 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 31598837 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 31598894 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 31598895 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 31598947
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525674 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 33525733 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525734 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 33525793 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525794 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 33525853 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525854 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 33525913 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525914 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 33525973 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 33525974 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 33526032 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526033 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 33526092 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526093 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 33526152 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 33526153 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 33526210 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 33526211 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 33526263 Score = 262 bits (132), Expect = 1e-66 Identities = 159/164 (96%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 448 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 507 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 508 tgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaat 567 ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtggga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaat 16677984 Query: 568 gagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 16677983 gagccggcgactcataggcagtggc-ttggttaagggaacggaa 16677941 Score = 167 bits (84), Expect = 5e-38 Identities = 107/112 (95%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 462 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 521 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 522 gtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccg 573 |||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 32744712 gtggga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 455 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 493 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttc 51 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47867 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 47808 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47807 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 47748 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47747 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 47688 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47687 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 47628 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47627 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 47568 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 47567 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 47509 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47508 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 47449 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47448 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 47389 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 47388 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 47331 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 47330 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 47278
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70871 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 70930 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70931 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 70990 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70991 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 71050 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71051 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 71110 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71111 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 71170 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 71171 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 71229 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71230 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 71289 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71290 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 71349 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 71350 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 71407 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 71408 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 71460 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 342 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 343 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 401 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 461 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 521 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 522 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 579 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 580 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 632
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949452 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19949511 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949512 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19949571 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949572 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19949631 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949632 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19949691 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949692 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19949751 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 19949752 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 19949810 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949811 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 19949870 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949871 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 19949930 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 19949931 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 19949988 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 19949989 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 19950041 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283294 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10283235 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10283234 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10283175 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283174 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10283115 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283114 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10283055 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283054 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10282995 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 10282994 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 10282936 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282935 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10282876 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282875 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 10282816 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 10282815 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 10282758 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10282757 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 10282705 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393082 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10393141 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393142 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10393201 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393202 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10393261 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393262 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10393321 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393322 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10393381 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 10393382 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 10393440 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393441 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10393500 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393501 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 10393560 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 10393561 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 10393618 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10393619 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 10393671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 ttgtgctgctaggcgaagcggttgagtgc 296 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119776 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119775 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119716 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119656 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119596 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119536 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 119535 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 119477 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119476 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119417 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119416 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119357 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 119356 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 119299 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119298 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 119246 Score = 1098 bits (554), Expect = 0.0 Identities = 588/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95204 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95263 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95264 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95323 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95324 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95383 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95443 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95503 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 95504 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 95562 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95563 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95622 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95682 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 95683 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 95740 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 95741 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 95793
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 895 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 894 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 835 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 775 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 715 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 655 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 654 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 596 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 536 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 476 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 475 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 417 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 416 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 359 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 358 gggaatggaa 349
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44867 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 44809 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 44808 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 44749 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44748 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 44689 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44688 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 44629 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44628 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 44569 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 44568 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 44510 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44509 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 44450 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44449 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 44390 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 44389 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 44331 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44330 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 44273 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 44272 gggaatggaa 44263 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20251 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 20309 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20310 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 20369 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20370 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 20429 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20430 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 20489 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20490 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 20549 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 20550 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 20608 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20609 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 20668 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20669 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 20728 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 20729 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 20787 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20788 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 20845 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 20846 gggaatggaa 20855
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 1438 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1437 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 1378 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 1318 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1258 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 1198 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1197 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 1139 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 1079 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 1019 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1018 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 960 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 959 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 902 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 901 gggaatggaa 892
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123706 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 123648 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123647 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 123588 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123587 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 123528 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123527 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123468 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123467 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123408 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 123407 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 123349 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123348 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 123289 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123288 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 123229 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123228 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 123170 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123169 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 123112 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 123111 gggaatggaa 123102 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99131 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 99189 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99190 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 99249 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99250 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 99309 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99310 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 99369 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99370 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 99429 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 99430 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 99488 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99489 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 99548 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99549 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 99608 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99609 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 99667 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99668 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 99725 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 99726 gggaatggaa 99735
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124423 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 124365 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124364 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 124305 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124304 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 124245 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124244 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 124185 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124184 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 124125 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 124124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 124066 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124065 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 124006 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124005 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 123946 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123945 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 123887 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123886 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 123829 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 123828 gggaatggaa 123819 Score = 1094 bits (552), Expect = 0.0 Identities = 600/610 (98%), Gaps = 5/610 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99808 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 99866 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99867 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 99926 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99927 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 99986 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99987 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 100046 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100047 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 100106 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 100107 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 100165 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100166 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 100225 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100226 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 100285 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 100286 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 100344 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 100345 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 100402 Query: 602 gggaacggaa 611 ||||| |||| Sbjct: 100403 gggaatggaa 100412
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1092 bits (551), Expect = 0.0 Identities = 585/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 99 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 159 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 219 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 279 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 339 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 340 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 398 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 458 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 518 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 519 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 576 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacg 608 ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 577 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacg 626
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140839 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 140898 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 140899 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 140958 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140959 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 141018 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141019 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 141078 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141079 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 141138 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 141139 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 141197 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141198 atcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 141257 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141258 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 141317 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 141318 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 141375 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141376 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 141428
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93435 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 93494 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93495 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 93554 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93555 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 93614 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93615 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 93674 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93675 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 93734 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 93735 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 93793 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93794 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 93853 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93854 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 93913 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 93914 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 93971 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 93972 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 94024
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1090 bits (550), Expect = 0.0 Identities = 587/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27499 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 27558 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27559 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 27618 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27619 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 27678 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27679 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 27738 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27739 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 27798 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 27799 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 27857 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27858 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 27917 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27918 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 27977 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 27978 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 28035 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 28036 gttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 28088
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1082 bits (546), Expect = 0.0 Identities = 586/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242090 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9242031 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9242030 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9241971 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241970 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9241911 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241910 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9241851 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241850 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9241791 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 9241790 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 9241732 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241731 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9241672 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241671 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9241612 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9241611 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 9241554 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 9241553 gttgaagaatgagctggcgactcataggcagtggc-ttggttaagggaacggaa 9241501 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 150 actgaaacatcttagtagccagaggaaaagaaag 183 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1082 bits (546), Expect = 0.0 Identities = 586/594 (98%), Gaps = 4/594 (0%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53303 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 53244 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53243 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 53184 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53183 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 53124 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53123 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 53064 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53063 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 53004 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 53003 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 52945 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52944 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 52885 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52884 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 52825 Query: 498 gaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcct 557 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 52824 gaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcct 52767 Query: 558 gttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 52766 gttgaagaatgagctggcgactcataggcagtggc-ttggttaagggaacggaa 52714
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1072 bits (541), Expect = 0.0 Identities = 581/589 (98%), Gaps = 4/589 (0%) Strand = Plus / Plus Query: 19 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 79 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 138 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 139 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 199 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 259 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 318 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 319 cagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtggaa 378 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtggaa 359 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctg 558 ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 480 aaaccgtgctgagctcccaagcagtggga-ggggaaattgatctctga-ccgcgtgcctg 537 Query: 559 ttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 538 ttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaac 585
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1033 bits (521), Expect = 0.0 Identities = 595/611 (97%), Gaps = 7/611 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123646 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 123588 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 123587 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 123528 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123527 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 123468 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123467 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 123408 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123407 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 123348 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| ||||||| Sbjct: 123347 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga-cccgagt 123290 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123289 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 123230 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123229 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 123170 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123169 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 123111 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123110 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 123053 Query: 601 agggaacggaa 611 |||||| |||| Sbjct: 123052 agggaatggaa 123042 Score = 1033 bits (521), Expect = 0.0 Identities = 595/611 (97%), Gaps = 7/611 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99091 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 99149 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 99150 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 99209 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99210 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 99269 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99270 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 99329 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99330 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 99389 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| ||||||| Sbjct: 99390 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga-cccgagt 99447 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99448 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 99507 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99508 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 99567 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99568 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 99626 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99627 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 99684 Query: 601 agggaacggaa 611 |||||| |||| Sbjct: 99685 agggaatggaa 99695
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1033 bits (521), Expect = 0.0 Identities = 595/611 (97%), Gaps = 7/611 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5444 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 5502 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 5503 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 5562 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5563 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 5622 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5623 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 5682 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5683 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 5742 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| ||||||| Sbjct: 5743 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga-cccgagt 5800 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5801 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 5860 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5861 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 5920 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5921 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 5979 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5980 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 6037 Query: 601 agggaacggaa 611 |||||| |||| Sbjct: 6038 agggaatggaa 6048
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1033 bits (521), Expect = 0.0 Identities = 595/611 (97%), Gaps = 7/611 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 32 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 90 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 91 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 150 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 210 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 270 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 330 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| ||||||| Sbjct: 331 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga-cccgagt 388 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 448 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 508 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 509 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 567 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 568 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 625 Query: 601 agggaacggaa 611 |||||| |||| Sbjct: 626 agggaatggaa 636
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 997 bits (503), Expect = 0.0 Identities = 537/543 (98%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 69 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 128 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 129 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 189 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 249 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 309 ggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggg 368 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggg 299 Query: 369 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 359 Query: 429 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 419 Query: 489 atagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacc 548 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-c 477 Query: 549 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacg 608 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 478 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacg 536 Query: 609 gaa 611 ||| Sbjct: 537 gaa 539
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 981 bits (495), Expect = 0.0 Identities = 532/539 (98%), Gaps = 4/539 (0%) Strand = Plus / Plus Query: 73 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 132 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 253 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 313 aaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcac 372 ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctga-cccgagtagcatggggcac 299 Query: 373 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 359 Query: 433 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 419 Query: 493 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcg 552 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 420 aacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcg 477 Query: 553 tgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 478 tgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 535
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 916 bits (462), Expect = 0.0 Identities = 576/606 (95%), Gaps = 9/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139556 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 139498 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 139497 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 139439 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139438 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 139379 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139378 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139319 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| Sbjct: 139318 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcac 139259 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 139258 cctagatggcgagagtccagtagccgaaagcatcactggcttacgctctga-cccgagta 139200 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139199 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 139140 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139139 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 139080 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||| || ||| ||||| Sbjct: 139079 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatc 139024 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139023 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 138966 Query: 602 gggaac 607 |||||| Sbjct: 138965 gggaac 138960 Score = 916 bits (462), Expect = 0.0 Identities = 576/606 (95%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 110447 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 110448 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 110506 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110507 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 110566 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110567 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 110626 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| Sbjct: 110627 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcac 110686 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 110687 cctagatggcgagagtccagtagccgaaagcatcactggcttacgctctga-cccgagta 110745 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110746 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 110805 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110806 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 110865 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||| || ||| ||||| Sbjct: 110866 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatc 110921 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110922 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 110979 Query: 602 gggaac 607 |||||| Sbjct: 110980 gggaac 110985
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 916 bits (462), Expect = 0.0 Identities = 576/606 (95%), Gaps = 9/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134193 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 134135 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 134134 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 134076 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134075 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 134016 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134015 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 133956 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 133955 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcac 133896 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 133895 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 133837 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133836 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 133777 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133776 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 133717 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||| || ||| |||||| Sbjct: 133716 gagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatgtgatc 133661 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133660 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 133603 Query: 602 gggaac 607 |||||| Sbjct: 133602 gggaac 133597 Score = 916 bits (462), Expect = 0.0 Identities = 576/606 (95%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103778 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 103836 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 103837 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 103895 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103896 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 103955 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103956 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104015 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104016 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcac 104075 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 104076 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 104134 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104135 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 104194 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104195 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 104254 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||| || ||| |||||| Sbjct: 104255 gagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatgtgatc 104310 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104311 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 104368 Query: 602 gggaac 607 |||||| Sbjct: 104369 gggaac 104374
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 914 bits (461), Expect = 0.0 Identities = 485/489 (99%), Gaps = 3/489 (0%) Strand = Plus / Plus Query: 106 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 166 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 226 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 286 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 346 gctctgaccccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 405 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 299 Query: 406 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 359 Query: 466 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 419 Query: 526 gagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 585 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 420 ga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 477 Query: 586 cagtggctt 594 ||||||||| Sbjct: 478 cagtggctt 486
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 914 bits (461), Expect = 0.0 Identities = 575/605 (95%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127834 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 127776 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 127775 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 127717 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127716 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 127657 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127656 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 127597 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| Sbjct: 127596 ggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcac 127537 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||| ||||||||||||| ||||||| |||||||| Sbjct: 127536 cctagatggcgagagtccagtagccgaaaacatcactagcttacgctctga-cccgagta 127478 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127477 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 127418 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127417 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 127358 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||| || ||| |||||| Sbjct: 127357 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatgtgatc 127302 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127301 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 127244 Query: 602 gggaa 606 ||||| Sbjct: 127243 gggaa 127239 Score = 914 bits (461), Expect = 0.0 Identities = 575/605 (95%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107088 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 107146 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 107147 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 107205 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107206 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 107265 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107266 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 107325 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| Sbjct: 107326 ggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcac 107385 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||| ||||||||||||| ||||||| |||||||| Sbjct: 107386 cctagatggcgagagtccagtagccgaaaacatcactagcttacgctctga-cccgagta 107444 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107445 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 107504 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107505 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 107564 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||| || ||| |||||| Sbjct: 107565 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatgtgatc 107620 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107621 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 107678 Query: 602 gggaa 606 ||||| Sbjct: 107679 gggaa 107683
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 908 bits (458), Expect = 0.0 Identities = 471/474 (99%), Gaps = 1/474 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 103 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 163 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 223 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 283 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 343 Query: 318 ccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtgga 377 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 344 ccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtgga 402 Query: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 462 Query: 438 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 900 bits (454), Expect = 0.0 Identities = 574/606 (94%), Gaps = 9/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142078 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 142020 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 142019 aaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 141961 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141960 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 141901 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141900 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 141841 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| Sbjct: 141840 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcac 141781 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | ||||||||| |||||||||||||| ||||| ||||||| |||||||| Sbjct: 141780 cctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctga-cccgagta 141722 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141721 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 141662 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141661 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 141602 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||| || ||| ||||| Sbjct: 141601 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatc 141546 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141545 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 141488 Query: 602 gggaac 607 |||||| Sbjct: 141487 gggaac 141482 Score = 900 bits (454), Expect = 0.0 Identities = 574/606 (94%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111579 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 111637 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 111638 aaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 111696 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111697 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 111756 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111757 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 111816 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| Sbjct: 111817 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcac 111876 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | ||||||||| |||||||||||||| ||||| ||||||| |||||||| Sbjct: 111877 cctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctga-cccgagta 111935 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111936 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 111995 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111996 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 112055 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||| || ||| ||||| Sbjct: 112056 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatc 112111 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112112 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 112169 Query: 602 gggaac 607 |||||| Sbjct: 112170 gggaac 112175
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 892 bits (450), Expect = 0.0 Identities = 572/606 (94%), Gaps = 13/606 (2%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134951 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 134893 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 134892 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 134834 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134833 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 134774 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134773 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 134714 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 134713 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 134654 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||||| |||||||||||||||||||||||||||||| | ||| | |||||||| Sbjct: 134653 cctagatggctagagtccagtagccgaaagcatcactagcttacgttct-aacccgagta 134595 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134594 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 134535 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134534 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 134475 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||||| || ||| Sbjct: 134474 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg-----agaaatc 134423 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134422 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 134365 Query: 602 gggaac 607 |||||| Sbjct: 134364 gggaac 134359 Score = 892 bits (450), Expect = 0.0 Identities = 572/606 (94%), Gaps = 13/606 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105331 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 105389 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 105390 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 105448 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105449 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105508 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105509 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105568 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 105569 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 105628 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||||| |||||||||||||||||||||||||||||| | ||| | |||||||| Sbjct: 105629 cctagatggctagagtccagtagccgaaagcatcactagcttacgttct-aacccgagta 105687 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105688 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105747 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105748 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 105807 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| |||||||||||||||||||||| || ||| Sbjct: 105808 gagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg-----agaaatc 105859 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105860 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 105917 Query: 602 gggaac 607 |||||| Sbjct: 105918 gggaac 105923
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 888 bits (448), Expect = 0.0 Identities = 572/606 (94%), Gaps = 11/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136561 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 136503 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 136502 aaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 136444 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136443 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136384 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136383 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136324 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 136323 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 136264 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 136263 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 136205 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136204 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 136145 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136144 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 136085 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 136084 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggc 136031 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136030 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 135973 Query: 602 gggaac 607 |||||| Sbjct: 135972 gggaac 135967 Score = 888 bits (448), Expect = 0.0 Identities = 572/606 (94%), Gaps = 11/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105864 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 105922 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 105923 aaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 105981 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105982 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106041 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106101 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 106102 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 106161 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 106162 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 106220 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106221 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106280 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106281 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106340 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 106341 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggc 106394 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106395 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 106452 Query: 602 gggaac 607 |||||| Sbjct: 106453 gggaac 106458
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 878 bits (443), Expect = 0.0 Identities = 571/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132745 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 132687 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 132686 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 132628 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132627 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 132568 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132567 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132508 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 132507 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132448 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132447 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 132389 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132388 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 132329 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132328 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 132269 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 132268 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 132214 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132213 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 132156 Query: 602 gggaac 607 |||||| Sbjct: 132155 gggaac 132150 Score = 878 bits (443), Expect = 0.0 Identities = 571/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104133 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 104191 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 104192 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 104250 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104251 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 104310 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104311 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104370 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104371 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 104430 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104431 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 104489 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104490 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 104549 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104550 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 104609 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 104610 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 104664 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104665 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 104722 Query: 602 gggaac 607 |||||| Sbjct: 104723 gggaac 104728
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 878 bits (443), Expect = 0.0 Identities = 571/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132968 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 132910 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 132909 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 132851 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132850 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 132791 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132790 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132731 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 132730 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 132671 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132670 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 132612 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132611 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 132552 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132551 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 132492 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 132491 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggc 132437 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132436 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 132379 Query: 602 gggaac 607 |||||| Sbjct: 132378 gggaac 132373 Score = 878 bits (443), Expect = 0.0 Identities = 571/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103796 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 103854 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 103855 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 103913 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103914 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 103973 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103974 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104033 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 104034 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 104093 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104094 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 104152 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104153 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 104212 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104213 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 104272 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 104273 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggc 104327 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104328 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 104385 Query: 602 gggaac 607 |||||| Sbjct: 104386 gggaac 104391
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 878 bits (443), Expect = 0.0 Identities = 571/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132738 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 132680 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 132679 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 132621 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132620 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 132561 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132560 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132501 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 132500 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132441 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132440 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 132382 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132381 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 132322 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132321 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 132262 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 132261 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 132207 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132206 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 132149 Query: 602 gggaac 607 |||||| Sbjct: 132148 gggaac 132143 Score = 878 bits (443), Expect = 0.0 Identities = 571/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104131 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 104189 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 104190 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 104248 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104249 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 104308 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104368 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104369 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 104428 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104429 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 104487 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104488 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 104547 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104548 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 104607 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 104608 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 104662 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104663 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 104720 Query: 602 gggaac 607 |||||| Sbjct: 104721 gggaac 104726
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 870 bits (439), Expect = 0.0 Identities = 570/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131637 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 131579 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 131578 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 131520 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131519 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 131460 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131459 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131400 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 131399 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 131340 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 131339 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 131281 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131280 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 131221 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 131220 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 131161 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 131160 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 131106 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131105 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 131048 Query: 602 gggaac 607 |||||| Sbjct: 131047 gggaac 131042 Score = 870 bits (439), Expect = 0.0 Identities = 570/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 102998 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 103056 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 103057 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 103115 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103116 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 103175 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103176 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 103235 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 103236 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 103295 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 103296 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 103354 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103355 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 103414 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 103415 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 103474 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 103475 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 103529 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103530 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 103587 Query: 602 gggaac 607 |||||| Sbjct: 103588 gggaac 103593
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 870 bits (439), Expect = 0.0 Identities = 570/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133929 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 133871 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 133870 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 133812 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133811 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 133752 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133751 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 133692 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 133691 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 133632 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133631 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 133573 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133572 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 133513 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 133512 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 133453 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 133452 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggc 133398 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133397 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 133340 Query: 602 gggaac 607 |||||| Sbjct: 133339 gggaac 133334 Score = 870 bits (439), Expect = 0.0 Identities = 570/606 (94%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104720 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 104778 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 104779 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 104837 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104838 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 104897 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104898 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104957 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 104958 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 105017 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105018 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 105076 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105136 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105137 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 105196 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 105197 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggc 105251 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105252 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 105309 Query: 602 gggaac 607 |||||| Sbjct: 105310 gggaac 105315
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 862 bits (435), Expect = 0.0 Identities = 569/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140330 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 140272 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 140271 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 140213 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140212 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 140153 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140152 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 140093 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| Sbjct: 140092 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcac 140033 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 140032 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 139974 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139973 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 139914 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139913 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 139854 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | || ||||||||||||||||| | | | | | Sbjct: 139853 gagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag--acgggggc 139799 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139798 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 139741 Query: 602 gggaac 607 |||||| Sbjct: 139740 gggaac 139735 Score = 862 bits (435), Expect = 0.0 Identities = 569/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109730 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 109788 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 109789 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 109847 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109848 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 109907 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109908 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109967 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| Sbjct: 109968 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcac 110027 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 110028 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 110086 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110087 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 110146 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110147 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 110206 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | || ||||||||||||||||| | | | | | Sbjct: 110207 gagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag--acgggggc 110261 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110262 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 110319 Query: 602 gggaac 607 |||||| Sbjct: 110320 gggaac 110325
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 862 bits (435), Expect = 0.0 Identities = 569/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 29 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 87 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 88 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 146 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 206 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 266 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 267 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 326 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 327 cctagatggcgagagtccagtagccgagagcatcactagcttatgctctga-cccgagta 385 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 445 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 446 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 505 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 506 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggc 560 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 561 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 618 Query: 602 gggaac 607 |||||| Sbjct: 619 gggaac 624
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 862 bits (435), Expect = 0.0 Identities = 569/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 455 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 515 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--c 569 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 570 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 627 Query: 602 gggaac 607 |||||| Sbjct: 628 gggaac 633
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 846 bits (427), Expect = 0.0 Identities = 567/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106035 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 106093 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 106094 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 106152 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106153 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106212 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106272 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106273 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106332 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 106333 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 106391 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106392 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106451 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106452 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106511 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | | Sbjct: 106512 gagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgaggac 106566 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106567 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 106624 Query: 602 gggaac 607 |||||| Sbjct: 106625 gggaac 106630 Score = 797 bits (402), Expect = 0.0 Identities = 566/609 (92%), Gaps = 13/609 (2%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135874 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 135816 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 135815 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 135757 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135756 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135697 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135696 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135637 Query: 242 ggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 135636 ggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 135577 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgaccccgag 359 ||||||||||| | |||||||||||||||||||||||||||||| | | |||| |||||| Sbjct: 135576 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctga-cccgag 135518 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaat 418 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135517 tagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaat 135458 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 135457 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 135398 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135397 ggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgag 135343 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135342 gactctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggt 135285 Query: 599 taagggaac 607 ||||||||| Sbjct: 135284 taagggaac 135276
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 846 bits (427), Expect = 0.0 Identities = 567/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136150 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 136092 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 136091 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 136033 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136032 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135973 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135913 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 135912 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 135853 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 135852 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 135794 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135793 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135734 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135733 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135674 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | | Sbjct: 135673 gagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgaggac 135619 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135618 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 135561 Query: 602 gggaac 607 |||||| Sbjct: 135560 gggaac 135555 Score = 846 bits (427), Expect = 0.0 Identities = 567/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106257 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 106315 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 106316 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 106374 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106375 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106434 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106435 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106494 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106495 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106554 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 106555 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 106613 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106614 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106673 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106674 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106733 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | | Sbjct: 106734 gagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgaggac 106788 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106789 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 106846 Query: 602 gggaac 607 |||||| Sbjct: 106847 gggaac 106852
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 844 bits (426), Expect = 0.0 Identities = 570/609 (93%), Gaps = 11/609 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 46282 cctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcggggagttga 46340 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 46341 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 46399 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 46400 catgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaa 46459 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 46460 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 46519 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 46520 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcac 46579 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46580 cctagatggctagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 46638 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46639 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 46698 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 46699 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 46758 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gggaaagtg-- 538 ||||||||||||| |||||||| | ||||| |||||||||||||| || ||| Sbjct: 46759 gagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaggcgccgtgga 46815 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 | ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46816 agctctgac-cgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggt 46873 Query: 599 taagggaac 607 ||||||||| Sbjct: 46874 taagggaac 46882
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 136270 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 136212 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 136211 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 136153 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136152 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136093 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136092 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136033 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 136032 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135973 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135972 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 135914 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135913 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135854 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135853 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135794 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135793 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 135740 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135739 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 135682 Query: 601 agggaac 607 ||||||| Sbjct: 135681 agggaac 135675 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106360 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106418 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106419 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 106477 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106478 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106537 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106538 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106597 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106598 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106657 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106658 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 106716 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106717 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 106776 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106777 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106836 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106837 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106890 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106891 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106948 Query: 601 agggaac 607 ||||||| Sbjct: 106949 agggaac 106955
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 136908 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 136850 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 136849 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 136791 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136790 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136731 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136730 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136671 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 136670 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 136611 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 136610 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 136552 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136551 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 136492 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 136491 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 136432 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 136431 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 136378 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136377 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 136320 Query: 601 agggaac 607 ||||||| Sbjct: 136319 agggaac 136313 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106649 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106707 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106708 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 106766 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106767 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106826 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106827 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106886 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 106887 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 106946 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 106947 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 107005 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107006 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 107065 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 107066 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 107125 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 107126 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 107179 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107180 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 107237 Query: 601 agggaac 607 ||||||| Sbjct: 107238 agggaac 107244
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 1554 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 1612 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 1613 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 1671 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1672 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 1731 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1732 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1791 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 1792 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 1851 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1852 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 1910 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1911 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 1970 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1971 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 2030 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 2031 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 2084 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2085 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 2142 Query: 601 agggaac 607 ||||||| Sbjct: 2143 agggaac 2149
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135516 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135458 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135457 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135399 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135398 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135339 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135338 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135279 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135278 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135219 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 135218 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 135160 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135159 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135100 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135099 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135040 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135039 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 134986 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134985 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 134928 Query: 601 agggaac 607 ||||||| Sbjct: 134927 agggaac 134921 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105520 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105578 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105579 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105637 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105638 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105697 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105698 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105757 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105758 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105817 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105818 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 105876 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105877 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 105936 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 105937 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 105996 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 105997 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106050 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106051 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106108 Query: 601 agggaac 607 ||||||| Sbjct: 106109 agggaac 106115
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135651 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135593 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135592 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135534 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135533 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135474 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135414 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135413 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135354 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 135353 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 135295 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135294 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135235 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135234 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135175 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135174 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 135121 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135120 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 135063 Query: 601 agggaac 607 ||||||| Sbjct: 135062 agggaac 135056 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105692 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105750 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105751 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105809 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105810 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105869 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105870 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105929 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105930 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105989 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105990 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 106048 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106049 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 106108 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106109 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106168 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106169 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106222 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106223 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106280 Query: 601 agggaac 607 ||||||| Sbjct: 106281 agggaac 106287
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135649 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135591 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135590 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135532 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135531 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135472 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135412 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135411 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135352 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 135351 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 135293 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135292 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135233 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135232 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135173 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135172 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 135119 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135118 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 135061 Query: 601 agggaac 607 ||||||| Sbjct: 135060 agggaac 135054 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105689 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105747 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105748 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105806 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105807 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105866 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105867 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105926 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105927 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105986 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105987 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 106045 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106046 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 106105 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106106 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106165 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106166 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106219 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106220 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106277 Query: 601 agggaac 607 ||||||| Sbjct: 106278 agggaac 106284
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135561 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135503 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135502 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135444 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135443 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135384 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135324 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135323 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135264 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 135263 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 135205 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135145 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135144 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135085 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135084 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 135031 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135030 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 134973 Query: 601 agggaac 607 ||||||| Sbjct: 134972 agggaac 134966 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105567 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105625 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105626 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105684 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105685 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105744 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105745 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105804 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105805 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105864 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105865 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 105923 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105924 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 105983 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 105984 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106043 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106044 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106097 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106098 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106155 Query: 601 agggaac 607 ||||||| Sbjct: 106156 agggaac 106162
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 136268 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 136210 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 136209 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 136151 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136150 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136091 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136090 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136031 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 136030 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135971 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135970 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 135912 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135911 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135852 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135851 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135792 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135791 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 135738 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135737 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 135680 Query: 601 agggaac 607 ||||||| Sbjct: 135679 agggaac 135673 Score = 842 bits (425), Expect = 0.0 Identities = 568/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106358 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106416 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106417 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 106475 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106476 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106535 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106536 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106595 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106596 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106655 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106656 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 106714 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106715 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 106774 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106775 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106834 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106835 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106888 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106889 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106946 Query: 601 agggaac 607 ||||||| Sbjct: 106947 agggaac 106953
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 841 bits (424), Expect = 0.0 Identities = 568/607 (93%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 30 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 89 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 148 catgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaa 207 Query: 182 agcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaa 267 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 268 cggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaa 327 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 328 ccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgaccc-gagt 386 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 446 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 447 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccgg 506 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 507 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctgggg-- 561 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 619 Query: 601 agggaac 607 ||||||| Sbjct: 620 agggaac 626
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 839 bits (423), Expect = 0.0 Identities = 566/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139474 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 139416 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 139415 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 139357 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139356 catgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaa 139297 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139296 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139237 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 139236 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 139177 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 139176 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 139118 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139117 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 139058 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 139057 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggg 138998 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | | Sbjct: 138997 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--c 138943 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138942 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 138885 Query: 602 gggaac 607 |||||| Sbjct: 138884 gggaac 138879 Score = 839 bits (423), Expect = 0.0 Identities = 566/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109623 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 109681 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 109682 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 109740 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 109741 catgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaa 109800 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109801 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109860 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 109861 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 109920 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 109921 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 109979 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109980 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 110039 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 110040 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggg 110099 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | | Sbjct: 110100 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--c 110154 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110155 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 110212 Query: 602 gggaac 607 |||||| Sbjct: 110213 gggaac 110218
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 835 bits (421), Expect = 0.0 Identities = 567/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135999 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135941 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135940 aaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatc 135882 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135881 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135822 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135821 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135762 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 135761 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135702 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135701 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 135643 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135642 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135583 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135582 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135523 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135522 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 135469 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135468 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 135411 Query: 601 agggaac 607 ||||||| Sbjct: 135410 agggaac 135404 Score = 835 bits (421), Expect = 0.0 Identities = 567/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106139 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106197 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106198 aaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatc 106256 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106257 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106316 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106376 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106377 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106436 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106437 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 106495 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 106555 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106556 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106615 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106616 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106669 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106670 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 106727 Query: 601 agggaac 607 ||||||| Sbjct: 106728 agggaac 106734
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 835 bits (421), Expect = 0.0 Identities = 567/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135528 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135470 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135469 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135411 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135410 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135351 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135350 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135291 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135290 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135231 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 135230 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 135172 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135171 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 135112 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135111 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135052 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 135051 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 134998 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 134997 ctctga-ccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc-ttggtta 134940 Query: 601 agggaac 607 ||||||| Sbjct: 134939 agggaac 134933 Score = 835 bits (421), Expect = 0.0 Identities = 567/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105534 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105592 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105593 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105651 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105652 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105711 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105712 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105771 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105772 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105831 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105832 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 105890 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105891 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 105950 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 105951 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106010 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106011 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 106064 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 106065 ctctga-ccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc-ttggtta 106122 Query: 601 agggaac 607 ||||||| Sbjct: 106123 agggaac 106129
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 829 bits (418), Expect = 0.0 Identities = 566/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 131761 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 131703 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 131702 aaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatc 131644 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131643 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 131584 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131583 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131524 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 131523 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaac 131464 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131463 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 131405 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131404 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 131345 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 131344 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 131285 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | ||||| ||||||||||||||||| | || | Sbjct: 131284 gagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg-accaga-c 131230 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131229 cctgac-cgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 131172 Query: 602 gggaac 607 |||||| Sbjct: 131171 gggaac 131166 Score = 829 bits (418), Expect = 0.0 Identities = 566/606 (93%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 101684 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 101742 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 101743 aaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatc 101801 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101802 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 101861 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101862 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 101921 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 101922 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaac 101981 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 101982 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 102040 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102041 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 102100 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 102101 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 102160 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | ||||| ||||||||||||||||| | || | Sbjct: 102161 gagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg-accaga-c 102215 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102216 cctgac-cgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 102273 Query: 602 gggaac 607 |||||| Sbjct: 102274 gggaac 102279
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 825 bits (416), Expect = 0.0 Identities = 567/608 (93%), Gaps = 10/608 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139683 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 139625 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 139624 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 139566 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139565 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 139506 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139505 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139446 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||| Sbjct: 139445 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgca 139386 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 139385 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 139327 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139326 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 139267 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 139266 tcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 139207 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-ga 539 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 139206 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactagg 139150 Query: 540 tctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 599 |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139149 actctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtt 139092 Query: 600 aagggaac 607 |||||||| Sbjct: 139091 aagggaac 139084 Score = 825 bits (416), Expect = 0.0 Identities = 567/608 (93%), Gaps = 10/608 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109616 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 109674 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 109675 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 109733 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109734 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 109793 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109794 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109853 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||| Sbjct: 109854 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgca 109913 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 109914 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 109972 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109973 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 110032 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 110033 tcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 110092 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-ga 539 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 110093 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactagg 110149 Query: 540 tctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 599 |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110150 actctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtt 110207 Query: 600 aagggaac 607 |||||||| Sbjct: 110208 aagggaac 110215
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 819 bits (413), Expect = 0.0 Identities = 566/607 (93%), Gaps = 13/607 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 5 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 63 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 64 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 122 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 243 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 302 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||| | ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 303 ccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 360 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 480 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 481 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 534 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 535 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 592 Query: 601 agggaac 607 ||||||| Sbjct: 593 agggaac 599
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 815 bits (411), Expect = 0.0 Identities = 551/591 (93%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||| ||| |||||||| |||||| |||||||| Sbjct: 90 aaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctgaatt 148 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 208 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 209 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 268 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||| Sbjct: 269 ggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcac 328 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | |||||||||||||||||||||||||||||| ||||| |||| ||||| Sbjct: 329 cccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaaccc-gagta 387 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 447 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 448 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 507 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||||||| |||||||||||||||||||| | | | |||| Sbjct: 508 gagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcg-gatc 563 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 564 tctgacc-gcgtgcctgttgaagaatgagccggcgacttataggtagtggc 613
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 815 bits (411), Expect = 0.0 Identities = 424/427 (99%), Gaps = 1/427 (0%) Strand = Plus / Plus Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 299 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 359 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 419 Query: 481 gtagtga 487 ||||||| Sbjct: 420 gtagtga 426
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 809 bits (408), Expect = 0.0 Identities = 501/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 130505 cctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttga 130447 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 130446 aaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatc 130388 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130387 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 130328 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130327 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 130268 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 130267 ggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 130208 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130207 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 130149 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130148 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 130089 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 130088 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 130029 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130028 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 809 bits (408), Expect = 0.0 Identities = 501/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 101951 cctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttga 102009 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 102010 aaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatc 102068 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102069 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 102128 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102129 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 102188 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 102189 ggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 102248 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102249 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 102307 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102308 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 102367 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 102368 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 102427 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102428 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 93.7 bits (47), Expect = 6e-16 Identities = 57/59 (96%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 129963 ccgcgtgcctgttgaagaatgagccggcgactcataggtagtggc-ttggttaagggaa 129906 Score = 93.7 bits (47), Expect = 6e-16 Identities = 57/59 (96%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 102493 ccgcgtgcctgttgaagaatgagccggcgactcataggtagtggc-ttggttaagggaa 102550
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 801 bits (404), Expect = 0.0 Identities = 500/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 455 cctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcggg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 515 gagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 801 bits (404), Expect = 0.0 Identities = 500/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 455 cctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccgg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 515 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 85.7 bits (43), Expect = 2e-13 Identities = 56/59 (94%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 549 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| Sbjct: 588 cgcgtgcctgttgaagaattaaccggcgactcataggcagtggc-ttggttaagggaac 645
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 795 bits (401), Expect = 0.0 Identities = 562/607 (92%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142849 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 142791 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 142790 aaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 142732 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142731 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 142672 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142671 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 142612 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| ||| Sbjct: 142611 ggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgca 142552 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 142551 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 142493 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142492 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 142433 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 142432 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 142373 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | ||||||||||||||||||| | | | Sbjct: 142372 ggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca---ggg 142319 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142318 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 142261 Query: 601 agggaac 607 ||||||| Sbjct: 142260 agggaac 142254 Score = 795 bits (401), Expect = 0.0 Identities = 562/607 (92%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110479 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 110537 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 110538 aaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 110596 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110597 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 110656 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110657 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 110716 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| ||| Sbjct: 110717 ggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgca 110776 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 110777 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 110835 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110836 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 110895 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 110896 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 110955 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | ||||||||||||||||||| | | | Sbjct: 110956 ggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca---ggg 111009 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111010 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 111067 Query: 601 agggaac 607 ||||||| Sbjct: 111068 agggaac 111074
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 793 bits (400), Expect = 0.0 Identities = 499/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | ||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 455 cctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccgg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 515 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 44.1 bits (22), Expect = 0.53 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 549 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 594 ||||||||||||||| ||||| || |||| ||||| |||||||||| Sbjct: 588 cgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggctt 632
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 793 bits (400), Expect = 0.0 Identities = 499/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | ||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 455 cctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 515 gagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/59 (91%), Gaps = 2/59 (3%) Strand = Plus / Plus Query: 549 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||||||||| || ||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 588 cgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggc-ttggttaagggaac 644
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 793 bits (400), Expect = 0.0 Identities = 499/528 (94%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggggttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | ||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 455 cctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 515 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 77.8 bits (39), Expect = 4e-11 Identities = 56/59 (94%), Gaps = 2/59 (3%) Strand = Plus / Plus Query: 549 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 588 cgcgtgcctgttgaa-aatgagccggcgactcataggaagtggc-ttggttaagggaac 644
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 791 bits (399), Expect = 0.0 Identities = 564/609 (92%), Gaps = 13/609 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 86292 cctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttga 86350 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||||||||||||||||||| ||||||| |||| ||| |||||| ||||||||| Sbjct: 86351 aaatgagcatagatccggagattcccgaataggttaacccttttaactgc-tgctgaatc 86409 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86410 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatagaa 86469 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86470 agcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaac 86529 Query: 242 ggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 299 |||||||||||||||| |||| |||| |||||||||||||||||||||||||| | || Sbjct: 86530 ggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgc 86589 Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgag 359 ||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| ||| Sbjct: 86590 accctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaaccc-gag 86648 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86649 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 86708 Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 86709 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 86768 Query: 480 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-g 538 || ||||||||||||| |||||||| | |||||||||||||||||| || ||| | | Sbjct: 86769 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--ggaaaattag 86823 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 86824 atctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggt 86881 Query: 599 taagggaac 607 ||||||||| Sbjct: 86882 taagggaac 86890
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 791 bits (399), Expect = 0.0 Identities = 564/609 (92%), Gaps = 13/609 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 88378 cctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttga 88436 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||| Sbjct: 88437 aaattagcatagatccggagattcccgaataggttaacctttttcactgc-tgctgaatc 88495 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 88496 catgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatagaa 88555 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88556 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 88615 Query: 242 ggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgc 299 ||||||||||||||||| ||| |||| |||||||||||||||||||||||||| | || Sbjct: 88616 ggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgc 88675 Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgag 359 ||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| ||| Sbjct: 88676 accctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaaccc-gag 88734 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88735 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 88794 Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 88795 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 88854 Query: 480 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-g 538 || ||||||||||||| |||||||| | |||||||||||||||||| || ||| | | Sbjct: 88855 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--ggaaaattag 88909 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 88910 atctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggt 88967 Query: 599 taagggaac 607 ||||||||| Sbjct: 88968 taagggaac 88976
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 787 bits (397), Expect = 0.0 Identities = 428/433 (98%), Gaps = 4/433 (0%) Strand = Plus / Plus Query: 179 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 239 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccga 358 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-ga 179 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 239 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 299 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 300 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 358 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 359 atctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggt 416 Query: 599 taagggaacggaa 611 ||||||||||||| Sbjct: 417 taagggaacggaa 429
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 787 bits (397), Expect = 0.0 Identities = 563/608 (92%), Gaps = 12/608 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131841 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 131783 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 131782 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 131724 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131723 ccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaaga 131664 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131663 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 131604 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 131603 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 131544 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccga 358 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 131543 caccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccga 131485 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131484 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 131425 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 131424 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 131365 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 131364 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggg 131308 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 | |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131307 a-ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggt 131251 Query: 599 taagggaa 606 |||||||| Sbjct: 131250 taagggaa 131243 Score = 787 bits (397), Expect = 0.0 Identities = 563/608 (92%), Gaps = 12/608 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103553 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 103611 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 103612 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 103670 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103671 ccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaaga 103730 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103731 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 103790 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 103791 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 103850 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccga 358 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 103851 caccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccga 103909 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103910 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 103969 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 103970 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104029 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 104030 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggg 104086 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 | |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104087 a-ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggt 104143 Query: 599 taagggaa 606 |||||||| Sbjct: 104144 taagggaa 104151
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 783 bits (395), Expect = 0.0 Identities = 565/609 (92%), Gaps = 15/609 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || | |||||||||||||||||||||| Sbjct: 1797 cctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcggggagttga 1854 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 1855 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 1913 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1914 catgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaa 1973 Query: 182 agcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1974 agcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 2033 Query: 241 cggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttgagtgccg 298 |||||||||||||||||||||||||| | ||||||||||||||||| | || ||| | Sbjct: 2034 cggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctg 2093 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccga 358 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2094 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga-cccga 2152 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2153 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 2212 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2213 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 2272 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 2273 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---g 2326 Query: 539 atctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggt 598 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2327 ggctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggt 2384 Query: 599 taagggaac 607 ||||||||| Sbjct: 2385 taagggaac 2393
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 783 bits (395), Expect = 0.0 Identities = 426/431 (98%), Gaps = 4/431 (0%) Strand = Plus / Plus Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagt 179 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 239 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 299 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 358 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 359 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 416 Query: 601 agggaacggaa 611 ||||||||||| Sbjct: 417 agggaacggaa 427
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 783 bits (395), Expect = 0.0 Identities = 426/431 (98%), Gaps = 4/431 (0%) Strand = Plus / Plus Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagt 179 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 239 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 299 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 358 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 359 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 416 Query: 601 agggaacggaa 611 ||||||||||| Sbjct: 417 agggaacggaa 427
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 781 bits (394), Expect = 0.0 Identities = 560/607 (92%), Gaps = 13/607 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 526 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 584 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||||| Sbjct: 585 aaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatc 643 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 703 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 763 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 764 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 823 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 824 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 882 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 942 Query: 422 cctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| || Sbjct: 943 cctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcgg 1002 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | ||||| |||||||||||||| | | | Sbjct: 1003 ggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacagg---- 1055 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1056 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 1113 Query: 601 agggaac 607 ||||||| Sbjct: 1114 agggaac 1120
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 781 bits (394), Expect = 0.0 Identities = 425/430 (98%), Gaps = 4/430 (0%) Strand = Plus / Plus Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagta 179 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 358 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 359 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 416 Query: 602 gggaacggaa 611 |||||||||| Sbjct: 417 gggaacggaa 426
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 781 bits (394), Expect = 0.0 Identities = 425/430 (98%), Gaps = 4/430 (0%) Strand = Plus / Plus Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagta 182 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 242 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 302 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 303 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 361 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 362 tctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 419 Query: 602 gggaacggaa 611 |||||||||| Sbjct: 420 gggaacggaa 429
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 777 bits (392), Expect = 0.0 Identities = 423/428 (98%), Gaps = 4/428 (0%) Strand = Plus / Plus Query: 184 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 244 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 304 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagc 363 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagtagc 179 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 239 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 299 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 300 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 358 Query: 544 tgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 359 tga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagg 416 Query: 604 gaacggaa 611 |||||||| Sbjct: 417 gaacggaa 424
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 775 bits (391), Expect = 0.0 Identities = 564/608 (92%), Gaps = 17/608 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 130 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 188 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 189 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 247 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaaaaga 180 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 248 catgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaaga 307 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 367 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgc 299 |||| ||||||||||||||||||||||| |||||||||||||||| || || ||| || Sbjct: 368 cggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgc 426 Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgag 359 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 427 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gag 485 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 486 tagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaata 545 Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | Sbjct: 546 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc-atcg 604 Query: 480 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 539 || ||||||||||||| ||||||||| |||||||||||||||||| || || | Sbjct: 605 gggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga---ggccaggg- 657 Query: 540 tctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 599 |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 658 -ctctgacc-gcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtt 714 Query: 600 aagggaac 607 |||||||| Sbjct: 715 aagggaac 722
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 773 bits (390), Expect = 0.0 Identities = 528/568 (92%), Gaps = 9/568 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 137 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 138 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 196 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 197 catgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaa 256 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 316 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 317 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 376 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 377 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 435 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 495 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 496 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggg 555 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | ||||||||||||| |||||| | || | | Sbjct: 556 gagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--c 610 Query: 542 tctgacccgcgtgcctgttgaagaatga 569 ||||| |||||||||||||||||||||| Sbjct: 611 tctga-ccgcgtgcctgttgaagaatga 637
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 763 bits (385), Expect = 0.0 Identities = 556/606 (91%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||||| Sbjct: 97 aaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 336 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 455 cctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggg 514 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||| ||| |||||||| | ||||| |||||||||||||| | | | | Sbjct: 515 gagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacagg----c 567 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| | |||||||||||||| ||||||||||||||||||| |||||||| |||||||| Sbjct: 568 tctgaac-gcgtgcctgttgaaaaatgagccggcgactcatacgcagtggc-ttggttaa 625 Query: 602 gggaac 607 |||||| Sbjct: 626 gggaac 631
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 749 bits (378), Expect = 0.0 Identities = 475/504 (94%), Gaps = 3/504 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4530 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 4588 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 4589 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 4647 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4648 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 4707 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 4767 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct: 4768 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcac 4827 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4828 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 4886 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4887 acatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 4946 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 4947 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggg 5006 Query: 482 tagtgaaatagaacgtgaaaccgt 505 ||||||||||||| ||||||||| Sbjct: 5007 gagtgaaatagaacatgaaaccgt 5030 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5065 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 5122
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 749 bits (378), Expect = 0.0 Identities = 475/504 (94%), Gaps = 3/504 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4530 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 4588 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 4589 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 4647 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4648 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 4707 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 4767 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct: 4768 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcac 4827 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4828 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 4886 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4887 acatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 4946 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 4947 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggg 5006 Query: 482 tagtgaaatagaacgtgaaaccgt 505 ||||||||||||| ||||||||| Sbjct: 5007 gagtgaaatagaacatgaaaccgt 5030 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5065 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 5122
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 747 bits (377), Expect = 0.0 Identities = 556/607 (91%), Gaps = 12/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| Sbjct: 52656 cctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttga 52598 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| Sbjct: 52597 aaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatc 52539 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52538 catgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 52479 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52478 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 52419 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 300 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 52418 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 52359 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||| Sbjct: 52358 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga-cccgagt 52300 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52299 agcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 52240 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 52239 tcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgg 52180 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 52179 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 52126 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 52125 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc-ttggtta 52068 Query: 601 agggaac 607 ||||||| Sbjct: 52067 agggaac 52061 Score = 747 bits (377), Expect = 0.0 Identities = 556/607 (91%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| Sbjct: 37172 cctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttga 37230 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| Sbjct: 37231 aaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatc 37289 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37290 catgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 37349 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37350 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 37409 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 300 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 37410 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 37469 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||| Sbjct: 37470 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga-cccgagt 37528 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37529 agcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 37588 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 37589 tcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgg 37648 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 37649 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 37702 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 37703 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc-ttggtta 37760 Query: 601 agggaac 607 ||||||| Sbjct: 37761 agggaac 37767
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 747 bits (377), Expect = 0.0 Identities = 556/607 (91%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| Sbjct: 4100 cctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttga 4158 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| Sbjct: 4159 aaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatc 4217 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4218 catgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 4277 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4278 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 4337 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 300 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 4338 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 4397 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||| Sbjct: 4398 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga-cccgagt 4456 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4457 agcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 4516 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 4517 tcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgg 4576 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 4577 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 4630 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 4631 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc-ttggtta 4688 Query: 601 agggaac 607 ||||||| Sbjct: 4689 agggaac 4695
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 745 bits (376), Expect = 0.0 Identities = 493/528 (93%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4261 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 4319 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 4320 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 4378 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4379 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 4438 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4439 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 4498 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||| ||||||||||||| | || || |||| Sbjct: 4499 ggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcac 4558 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4559 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 4617 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4618 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 4677 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 4678 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggg 4737 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 4738 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 4782 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4797 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 4854
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 745 bits (376), Expect = 0.0 Identities = 493/528 (93%), Gaps = 6/528 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 23664 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 23606 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 23605 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 23547 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23546 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 23487 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 23486 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 23427 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||| ||||||||||||| | || || |||| Sbjct: 23426 ggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcac 23367 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 23366 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 23308 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23307 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 23248 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 23247 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggg 23188 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 23187 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 23143 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23128 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 23071
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 743 bits (375), Expect = 0.0 Identities = 546/596 (91%), Gaps = 14/596 (2%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 128401 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 128342 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 128341 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 128283 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 128282 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 128223 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128222 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 128163 Query: 258 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 311 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 128162 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 128103 Query: 312 taaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggca 371 | |||||||||||||||||||||||||||| | ||||| |||| |||||||||||||| Sbjct: 128102 aagagtccagtagccgaaagcatcactagctcacgctctaaccca-agtagcatggggca 128044 Query: 372 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128043 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 127984 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 ||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||| Sbjct: 127983 cgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaata 127924 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 551 |||| ||||||||| |||||||||||||||||||| | | | ||||||||||| || Sbjct: 127923 gaacatgaaaccgta---agctcccaagcagtgggaggagaattg-gatctctgacc-gc 127869 Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127868 atgcctgttgaggaatgagccggcgactcataggcagtggc-ctggttaagggaac 127814 Score = 743 bits (375), Expect = 0.0 Identities = 546/596 (91%), Gaps = 14/596 (2%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 95046 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 95105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 95106 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 95164 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 95165 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 95224 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95225 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 95284 Query: 258 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 311 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95285 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 95344 Query: 312 taaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggca 371 | |||||||||||||||||||||||||||| | ||||| |||| |||||||||||||| Sbjct: 95345 aagagtccagtagccgaaagcatcactagctcacgctctaaccca-agtagcatggggca 95403 Query: 372 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95404 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 95463 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 ||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||| Sbjct: 95464 cgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaata 95523 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 551 |||| ||||||||| |||||||||||||||||||| | | | ||||||||||| || Sbjct: 95524 gaacatgaaaccgta---agctcccaagcagtgggaggagaattg-gatctctgacc-gc 95578 Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95579 atgcctgttgaggaatgagccggcgactcataggcagtggc-ctggttaagggaac 95633
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 741 bits (374), Expect = 0.0 Identities = 555/605 (91%), Gaps = 12/605 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 116179 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 116121 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| Sbjct: 116120 aaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaatt 116062 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116061 cataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 116002 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 116001 agcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 115942 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||| Sbjct: 115941 ggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcac 115883 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||| ||||| Sbjct: 115882 cctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaaccc-gagta 115824 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 115823 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 115764 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 115763 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 115704 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg-at 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || || || Sbjct: 115703 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--aattgaat 115649 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115648 ctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggtta 115591 Query: 601 aggga 605 ||||| Sbjct: 115590 aggga 115586 Score = 741 bits (374), Expect = 0.0 Identities = 555/605 (91%), Gaps = 12/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 85941 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 85999 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| Sbjct: 86000 aaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaatt 86058 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86059 cataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 86118 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86119 agcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 86178 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||| Sbjct: 86179 ggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcac 86237 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||| ||||| Sbjct: 86238 cctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaaccc-gagta 86296 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 86297 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 86356 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86357 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 86416 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg-at 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || || || Sbjct: 86417 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--aattgaat 86471 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86472 ctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggtta 86529 Query: 601 aggga 605 ||||| Sbjct: 86530 aggga 86534
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 728 bits (367), Expect = 0.0 Identities = 554/607 (91%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2074 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 2132 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 2133 aaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 2191 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 2251 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2252 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 2311 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 2312 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 2371 Query: 302 cctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgaccccgagt 360 ||||||||| | |||||||||||||||||||| || | || ||||||| | ||||||| Sbjct: 2372 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctct-aacccgagt 2430 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2431 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 2490 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 2491 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 2550 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||| || ||| || Sbjct: 2551 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaat 2606 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 2607 ctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc-ctggtta 2664 Query: 601 agggaac 607 ||||||| Sbjct: 2665 agggaac 2671
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 728 bits (367), Expect = 0.0 Identities = 554/607 (91%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 118119 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 118061 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 118060 aaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 118002 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118001 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 117942 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117941 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 117882 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 117881 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 117822 Query: 302 cctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgaccccgagt 360 ||||||||| | |||||||||||||||||||| || | || ||||||| | ||||||| Sbjct: 117821 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctct-aacccgagt 117763 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 117762 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 117703 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 117702 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 117643 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||| || ||| || Sbjct: 117642 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaat 117587 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117586 ctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc-ctggtta 117529 Query: 601 agggaac 607 ||||||| Sbjct: 117528 agggaac 117522 Score = 728 bits (367), Expect = 0.0 Identities = 554/607 (91%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 89983 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 90041 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 90042 aaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 90100 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90101 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 90160 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 90161 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 90220 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 90221 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 90280 Query: 302 cctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgaccccgagt 360 ||||||||| | |||||||||||||||||||| || | || ||||||| | ||||||| Sbjct: 90281 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctct-aacccgagt 90339 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 90340 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 90399 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 90400 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 90459 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||| || ||| || Sbjct: 90460 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaat 90515 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90516 ctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc-ctggtta 90573 Query: 601 agggaac 607 ||||||| Sbjct: 90574 agggaac 90580
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 726 bits (366), Expect = 0.0 Identities = 552/606 (91%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 90 aaataagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 148 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 208 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 209 agcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 268 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||| |||||| | |||||||| |||||||||||| ||||| | | |||| Sbjct: 269 ggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcac 328 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 | ||||||| | |||||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 329 catagatggtgagagtccagtagccgaaagcatcactagtttatgctct-aacccgagta 387 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 388 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 447 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 448 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggg 507 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| | |||||||||||||||||| || ||| ||| Sbjct: 508 gagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaatc 563 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 564 tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc-ctggttaa 621 Query: 602 gggaac 607 |||||| Sbjct: 622 gggaac 627
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 724 bits (365), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3920 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 3978 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 3979 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 4037 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 4038 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 4097 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4098 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 4157 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 4158 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 4217 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||||||||| |||| |||| || | | |||||||| Sbjct: 4218 cccagatggtgagagtccagtagccgaaagcaccactgtcttacact-ttaacccgagta 4276 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4277 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 4336 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4337 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 4396 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||| || | |||| |||||||||| || || ||| |||| Sbjct: 4397 gagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatc 4452 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 4453 tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggttaa 4510 Query: 602 gggaa 606 ||||| Sbjct: 4511 gggaa 4515
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 724 bits (365), Expect = 0.0 Identities = 555/610 (90%), Gaps = 13/610 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| || ||||||||||||||| ||||||| ||||||||||||||| |||||||| Sbjct: 90 aaataagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctgaatt 148 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 149 cataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaa 208 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 209 agcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaac 268 Query: 242 ggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgcc 297 ||||||||||| |||| |||||| || ||| ||||||||||||||| ||||||| | Sbjct: 269 ggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcct 328 Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccg 357 |||||| |||||| | ||||||||| |||||||||| || | |||||||||| |||| | Sbjct: 329 gcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaaccc-g 387 Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 447 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 507 Query: 478 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 537 ||| ||||||||||||| ||||||||| |||||||||||||||||||| | | | Sbjct: 508 cggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcg- 563 Query: 538 gatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttgg 597 ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 564 gatctctgacc-gcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctgg 621 Query: 598 ttaagggaac 607 |||||||||| Sbjct: 622 ttaagggaac 631
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 724 bits (365), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 72 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 73 aaataagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctgaatc 131 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| || |||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 132 cataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagagaa 191 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 192 agcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaac 251 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | |||| Sbjct: 252 ggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcac 311 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| | ||||||||| |||||||||| || ||||| ||||| |||| ||||| Sbjct: 312 cctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaaccc-gagta 370 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 acatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 490 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||||||| |||| ||||||||||||||| | | | |||| Sbjct: 491 gagtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagaatcg-gatc 546 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 547 tctgacc-gcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggttaa 604 Query: 602 gggaa 606 ||||| Sbjct: 605 gggaa 609
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 724 bits (365), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 89 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 148 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 207 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 267 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 268 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 327 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||||||||| |||| |||| || | | |||||||| Sbjct: 328 cccagatggtgagagtccagtagccgaaagcaccactgtcttacact-ttaacccgagta 386 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 446 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 447 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 506 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||| || | |||| |||||||||| || || ||| |||| Sbjct: 507 gagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatc 562 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 563 tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggttaa 620 Query: 602 gggaa 606 ||||| Sbjct: 621 gggaa 625
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 724 bits (365), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 151215 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 151157 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 151156 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 151098 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 151097 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 151038 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 151037 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 150978 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 150977 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 150918 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||||||||| |||| |||| || | | |||||||| Sbjct: 150917 cccagatggtgagagtccagtagccgaaagcaccactgtcttacact-ttaacccgagta 150859 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150858 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 150799 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 150798 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 150739 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||| || | |||| |||||||||| || || ||| |||| Sbjct: 150738 gagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatc 150683 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 150682 tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggttaa 150625 Query: 602 gggaa 606 ||||| Sbjct: 150624 gggaa 150620 Score = 724 bits (365), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117451 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 117509 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 117510 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 117568 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 117569 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 117628 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117629 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 117688 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 117689 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 117748 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||||||||| |||| |||| || | | |||||||| Sbjct: 117749 cccagatggtgagagtccagtagccgaaagcaccactgtcttacact-ttaacccgagta 117807 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117808 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 117867 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117868 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 117927 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||| || | |||| |||||||||| || || ||| |||| Sbjct: 117928 gagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatc 117983 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 117984 tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggttaa 118041 Query: 602 gggaa 606 ||||| Sbjct: 118042 gggaa 118046
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 724 bits (365), Expect = 0.0 Identities = 559/607 (92%), Gaps = 23/607 (3%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 703 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 645 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||| ||| |||| |||||||||| Sbjct: 644 aaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctgaatc 591 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||| || |||| ||| |||||||||||||||||||||||||| Sbjct: 590 catg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaaagaa 538 Query: 182 a-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 aggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 478 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 ||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||| Sbjct: 477 cggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgca 418 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 417 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga-cccgagt 359 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 299 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 298 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 239 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 238 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg-- 184 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 183 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 126 Query: 601 agggaac 607 ||||||| Sbjct: 125 agggaac 119
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 724 bits (365), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 89 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 148 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 207 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 267 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 268 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 327 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||||||||| |||| |||| || | | |||||||| Sbjct: 328 cccagatggtgagagtccagtagccgaaagcaccactgtcttacact-ttaacccgagta 386 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 446 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 447 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 506 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||| || | |||| |||||||||| || || ||| |||| Sbjct: 507 gagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatc 562 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 563 tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggttaa 620 Query: 602 gggaa 606 ||||| Sbjct: 621 gggaa 625
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 722 bits (364), Expect = 0.0 Identities = 491/528 (92%), Gaps = 7/528 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||||| Sbjct: 97 aaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 336 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 394 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 454 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 455 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggg 513 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||||||||| ||| |||||||| | ||||| |||||||||||||| Sbjct: 514 gagtgaaataaaacatgaaaccg---taagctctcaagcagtgggagg 558
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 720 bits (363), Expect = 0.0 Identities = 485/519 (93%), Gaps = 10/519 (1%) Strand = Plus / Minus Query: 77 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 136 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 197 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 257 caatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaa 315 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtg 375 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtg 215 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 214 gaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgat 155 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 154 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 95 Query: 496 gtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgc 555 |||||||| | |||||||||||||||||||| | | | |||||| |||||||| Sbjct: 94 atgaaaccg---taagctcccaagcagtgggaggagcca---gggctctga-ccgcgtgc 42 Query: 556 ctgttgaagaatgagccggcgactcataggcagtggctt 594 ||||||||||||||||||||||||||||||||||||||| Sbjct: 41 ctgttgaagaatgagccggcgactcataggcagtggctt 3
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 716 bits (361), Expect = 0.0 Identities = 450/474 (94%), Gaps = 6/474 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 85 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 86 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 144 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 204 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 264 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| || | | |||| Sbjct: 265 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcac 324 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 325 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 383 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 443 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 475 | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 444 ac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 712 bits (359), Expect = 0.0 Identities = 552/607 (90%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146529 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 146471 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| Sbjct: 146470 aaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaatt 146412 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146411 cataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaa 146352 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 146351 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 146292 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | || Sbjct: 146291 ggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtac 146232 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgaccccgagt 360 ||||||||| | |||||||||||||||||||||||| || |||||||| | ||||||| Sbjct: 146231 cctagatggtgagagtccagtagccgaaagcatcactggctttatgctc-caacccgagt 146173 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 146172 agcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 146113 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 146112 tcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcgg 146053 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | ||||||||||||||||| || ||| ||| Sbjct: 146052 ggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggagaatcggat 145997 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 | |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 145996 ccctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggtta 145939 Query: 601 agggaac 607 ||||||| Sbjct: 145938 agggaac 145932 Score = 712 bits (359), Expect = 0.0 Identities = 552/607 (90%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111933 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 111991 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| Sbjct: 111992 aaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaatt 112050 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 112051 cataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaa 112110 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112111 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 112170 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | || Sbjct: 112171 ggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtac 112230 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgaccccgagt 360 ||||||||| | |||||||||||||||||||||||| || |||||||| | ||||||| Sbjct: 112231 cctagatggtgagagtccagtagccgaaagcatcactggctttatgctc-caacccgagt 112289 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112290 agcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 112349 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 112350 tcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcgg 112409 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | ||||||||||||||||| || ||| ||| Sbjct: 112410 ggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggagaatcggat 112465 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 | |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 112466 ccctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ctggtta 112523 Query: 601 agggaac 607 ||||||| Sbjct: 112524 agggaac 112530
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 710 bits (358), Expect = 0.0 Identities = 440/464 (94%), Gaps = 3/464 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 7 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 65 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| Sbjct: 66 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccgaatc 124 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 125 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 184 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 244 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| Sbjct: 245 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcac 304 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 305 cctagatggtgggagtccagtagccgaaagcatcactagcttacgctctga-cccgagta 363 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 423 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 465 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 424 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 706 bits (356), Expect = 0.0 Identities = 456/484 (94%), Gaps = 9/484 (1%) Strand = Plus / Plus Query: 112 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 171 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 172 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 232 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 290 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 291 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 350 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 351 gaccccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 410 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gaccc-gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 315 Query: 411 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 470 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 316 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 375 Query: 471 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 530 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 376 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432 Query: 531 ggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 590 | | | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gcca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 488 Query: 591 gctt 594 |||| Sbjct: 489 gctt 492
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 696 bits (351), Expect = 0.0 Identities = 364/367 (99%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 70 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 129 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 130 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 190 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 250 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatgggg 369 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatgggg 299 Query: 370 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 359 Query: 430 accgata 436 ||||||| Sbjct: 360 accgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 676 bits (341), Expect = 0.0 Identities = 357/361 (98%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 20 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 79 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 80 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 139 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 200 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 260 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 320 agtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtggaat 379 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctg-ccccgagtagcatggggcacgtggaat 123065 Query: 380 c 380 | Sbjct: 123064 c 123064 Score = 406 bits (205), Expect = e-110 Identities = 235/241 (97%), Gaps = 3/241 (1%) Strand = Plus / Minus Query: 372 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 551 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgc 122643 Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtg-gctttggttaagggaacgga 610 ||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| Sbjct: 122642 gtgcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 122583 Query: 611 a 611 | Sbjct: 122582 a 122582
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 676 bits (341), Expect = 0.0 Identities = 357/361 (98%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 20 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 79 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 80 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 139 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 200 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 260 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 320 agtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtggaat 379 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctg-ccccgagtagcatggggcacgtggaat 12825606 Query: 380 c 380 | Sbjct: 12825605 c 12825605 Score = 406 bits (205), Expect = e-110 Identities = 235/241 (97%), Gaps = 3/241 (1%) Strand = Plus / Minus Query: 372 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 551 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgc 12825184 Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtg-gctttggttaagggaacgga 610 ||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| Sbjct: 12825183 gtgcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 12825124 Query: 611 a 611 | Sbjct: 12825123 a 12825123 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 316 gtccagtagccgaaagcatcactagcttatgctctga 352 ||||||||||||||||||||||||||||||||||||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctga 16021819
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 658 bits (332), Expect = 0.0 Identities = 402/421 (95%), Gaps = 17/421 (4%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtg 375 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtg 75300 Query: 376 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75299 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 75240 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75239 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 75180 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccg 550 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| Sbjct: 75179 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccg 75130 Query: 551 cgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacgga 610 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 75129 cgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatgga 75071 Query: 611 a 611 | Sbjct: 75070 a 75070 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75682 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75624 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 75623 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 75564 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75563 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 75504 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 75503 agcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 658 bits (332), Expect = 0.0 Identities = 402/421 (95%), Gaps = 17/421 (4%) Strand = Plus / Plus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtg 375 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtg 382238 Query: 376 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 382239 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 382298 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382299 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 382358 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccg 550 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| Sbjct: 382359 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccg 382408 Query: 551 cgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacgga 610 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 382409 cgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatgga 382467 Query: 611 a 611 | Sbjct: 382468 a 382468 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381856 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 381914 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 381915 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 381974 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381975 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 382034 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 382035 agcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 658 bits (332), Expect = 0.0 Identities = 402/421 (95%), Gaps = 17/421 (4%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtg 375 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtg 113391 Query: 376 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113390 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 113331 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113330 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 113271 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccg 550 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| Sbjct: 113270 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccg 113221 Query: 551 cgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacgga 610 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 113220 cgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatgga 113162 Query: 611 a 611 | Sbjct: 113161 a 113161 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113773 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 113715 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 113714 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 113655 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113654 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 113595 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 113594 agcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 658 bits (332), Expect = 0.0 Identities = 402/421 (95%), Gaps = 17/421 (4%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtg 375 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtg 368073 Query: 376 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 368072 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 368013 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368012 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 367953 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccg 550 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| Sbjct: 367952 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccg 367903 Query: 551 cgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacgga 610 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 367902 cgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatgga 367844 Query: 611 a 611 | Sbjct: 367843 a 367843 Score = 658 bits (332), Expect = 0.0 Identities = 402/421 (95%), Gaps = 17/421 (4%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgtg 375 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctga-cccgagtagcatggggcacgtg 184678 Query: 376 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 184677 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 184618 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184617 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 184558 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccg 550 |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| Sbjct: 184557 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccg 184508 Query: 551 cgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacgga 610 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 184507 cgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatgga 184449 Query: 611 a 611 | Sbjct: 184448 a 184448 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368455 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 368397 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 368396 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 368337 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368336 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 368277 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 368276 agcaaaagcgattcccgta 368258 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185060 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 185002 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 185001 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 184942 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184941 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 184882 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 184881 agcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 636 bits (321), Expect = e-179 Identities = 543/607 (89%), Gaps = 13/607 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||| |||| || |||||||||||||||||||||||| Sbjct: 30 cctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcggggagttga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| |||||||| ||| || ||||||| | ||||| |||| |||| Sbjct: 89 aaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctcaatc 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 148 catgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaataa 207 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 208 agcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaac 267 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 |||||||||||||||||||| |||||| ||||||||||||||||| | || | || ||| Sbjct: 268 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgca 327 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagt 360 ||||||||||| |||||||||||| | |||||||||||| || ||||||| ||||||| Sbjct: 328 ccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctga-cccgagt 386 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 agcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 446 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 447 tcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattgg 505 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||| ||||||||||||||| | | | Sbjct: 506 ggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagcca---ggg 559 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 560 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc-ttggtta 617 Query: 601 agggaac 607 ||||||| Sbjct: 618 agggaac 624
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 549 bits (277), Expect = e-153 Identities = 321/333 (96%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 97 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 156 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 157 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 217 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 277 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 336 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 337 ctagcttatgctctgaccccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 396 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 38 Query: 397 ggaccaccttgcaaggctaaatactcctgggtg 429 ||||||||||||||||||||||||||||||||| Sbjct: 37 ggaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 527 bits (266), Expect = e-146 Identities = 297/302 (98%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatgggg 369 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagtagcatgggg 59 Query: 370 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 119 Query: 430 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 179 Query: 490 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccc 549 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 180 tagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-cc 237 Query: 550 gcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacgg 609 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 238 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacgg 296 Query: 610 aa 611 || Sbjct: 297 aa 298
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 509 bits (257), Expect = e-141 Identities = 368/398 (92%), Gaps = 7/398 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2629 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 2687 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 2688 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 2746 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 2747 ccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaaga 2806 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2807 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 2866 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 2867 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 2926 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccga 358 ||||||||||||| | |||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 2927 caccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctga-cccga 2984 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaa 396 ||||||| |||||||||||||||||||||||||||||| Sbjct: 2985 gtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 509 bits (257), Expect = e-141 Identities = 368/398 (92%), Gaps = 7/398 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 884 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 942 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 943 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 1001 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 1002 ccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaaga 1061 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 1121 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 1122 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 1181 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccga 358 ||||||||||||| | |||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 1182 caccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctga-cccga 1239 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaa 396 ||||||| |||||||||||||||||||||||||||||| Sbjct: 1240 gtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 258 aatacaagcgt 268 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 258 aatacaagcgt 268 ||||||||||| Sbjct: 283 aatacaagcgt 293
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 474 bits (239), Expect = e-130 Identities = 507/591 (85%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| |||| |||||||||||||||||||| || Sbjct: 143949 cctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccga 144007 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| Sbjct: 144008 aaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaatt 144067 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | || Sbjct: 144068 cagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaa 144127 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| || Sbjct: 144128 agcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagac 144187 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||| || || | || | ||||||||||| ||||||||| |||| Sbjct: 144188 ggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcac 144247 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||| ||| | |||||| | |||| | ||| |||| Sbjct: 144248 cccagatggtgatagtccagtagccggaagtacagctagctcacgctc-caacccaagta 144306 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 144307 gcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatatt 144366 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 144367 cctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggg 144426 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| ||||||||||||||||||| || ||| | |||| Sbjct: 144427 gagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggagaatgagatc 144482 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| | |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 144483 tct-aaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 144532 Score = 474 bits (239), Expect = e-130 Identities = 507/591 (85%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| |||| |||||||||||||||||||| || Sbjct: 88902 cctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccga 88844 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| Sbjct: 88843 aaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaatt 88784 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | || Sbjct: 88783 cagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaa 88724 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| || Sbjct: 88723 agcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagac 88664 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||| || || | || | ||||||||||| ||||||||| |||| Sbjct: 88663 ggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcac 88604 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagta 361 || |||||| | ||||||||||||| ||| | |||||| | |||| | ||| |||| Sbjct: 88603 cccagatggtgatagtccagtagccggaagtacagctagctcacgctc-caacccaagta 88545 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 88544 gcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatatt 88485 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 88484 cctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggg 88425 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| |||||||| ||||||||||||||||||| || ||| | |||| Sbjct: 88424 gagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggagaatgagatc 88369 Query: 542 tctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| | |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88368 tct-aaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 88319
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 460 bits (232), Expect = e-126 Identities = 312/336 (92%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 20 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 79 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 177078 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccgg 177137 Query: 80 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 139 |||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 177138 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagag 177196 Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 200 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 259 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 260 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 318 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 319 cagtagccgaaagcatcactagcttatgctctgacc 354 |||||||||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 103 bits (52), Expect = 7e-19 Identities = 59/60 (98%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 177411 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaac 177469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagc 168 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagc 168 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 442 bits (223), Expect = e-121 Identities = 247/251 (98%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 179 Query: 541 ctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 180 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 237 Query: 601 agggaacggaa 611 ||||||||||| Sbjct: 238 agggaacggaa 248
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 418 bits (211), Expect = e-114 Identities = 232/235 (98%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 377 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 437 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 497 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcc 556 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcc 178 Query: 557 tgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 611 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 179 tgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 232
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 400 bits (202), Expect = e-108 Identities = 506/598 (84%), Gaps = 22/598 (3%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 139224 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 139167 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 133 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 139166 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 139111 Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 139110 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 139051 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 139050 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 138991 Query: 254 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 309 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 138990 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 138932 Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatgggg 369 | || ||||| ||||||| ||||| ||| ||||| |||||||||| ||||||||||||| Sbjct: 138931 gttagagtccggtagccggaagcagcacaggcttacgctctgaccc-gagtagcatgggg 138873 Query: 370 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 429 |||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||| Sbjct: 138872 cacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtg 138813 Query: 430 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 489 |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 138812 accgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaa 138753 Query: 490 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccc 549 |||||| ||||||||| ||||||| |||||||||||| | | | ||||||||||| Sbjct: 138752 tagaacatgaaaccgta---agctcccgagcagtgggaggagaattg-gatctctgacc- 138698 Query: 550 gcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 138697 gcgtgcctgttgaagaatgagccggcgacttataggcggcggc-ctggttaagggaac 138641 Score = 400 bits (202), Expect = e-108 Identities = 506/598 (84%), Gaps = 22/598 (3%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 82653 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 82710 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 133 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 82711 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 82766 Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 82767 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 82826 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 82827 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 82886 Query: 254 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 309 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 82887 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 82945 Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatgggg 369 | || ||||| ||||||| ||||| ||| ||||| |||||||||| ||||||||||||| Sbjct: 82946 gttagagtccggtagccggaagcagcacaggcttacgctctgaccc-gagtagcatgggg 83004 Query: 370 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 429 |||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||| Sbjct: 83005 cacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtg 83064 Query: 430 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 489 |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 83065 accgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaa 83124 Query: 490 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccc 549 |||||| ||||||||| ||||||| |||||||||||| | | | ||||||||||| Sbjct: 83125 tagaacatgaaaccgta---agctcccgagcagtgggaggagaattg-gatctctgacc- 83179 Query: 550 gcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 83180 gcgtgcctgttgaagaatgagccggcgacttataggcggcggc-ctggttaagggaac 83236
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 396 bits (200), Expect = e-107 Identities = 292/320 (91%), Gaps = 2/320 (0%) Strand = Plus / Minus Query: 92 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 151 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 212 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 271 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 272 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 331 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 332 catcactagcttatgctctgaccccgagtagcatggggcacgtggaatcccgtgtgaatc 391 |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3456 catccctagcttacgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatt 3398 Query: 392 agcaaggaccaccttgcaag 411 |||||||||||||||||||| Sbjct: 3397 agcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 480 ggtagtgaaatagaacgtgaaacc 503 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaac 607 |||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 3243 ccgcgtacctattgaagaatgagccgacgactcataggcagtggc-ttggttaagggaac 3185 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||| ||| |||||||||||||||| | |||||| |||||||| |||||| Sbjct: 3757 acgaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgtagatca 3698 Query: 78 ggag 81 |||| Sbjct: 3697 ggag 3694
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 392 bits (198), Expect = e-106 Identities = 330/368 (89%), Gaps = 7/368 (1%) Strand = Plus / Minus Query: 237 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 296 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 297 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccc 356 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| |||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaaccc- 6166 Query: 357 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6165 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 6106 Query: 417 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6105 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccta 6046 Query: 477 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 536 ||| ||||||||||||| |||||||| | ||| ||||||||||||| || ||| | Sbjct: 6045 tcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggagaatg 5990 Query: 537 tgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttg 596 |||||||| |||||||||| ||||||||||||||||||||| |||||||||||| ||| Sbjct: 5989 gaatctctga-ccgcgtgccttttgaagaatgagccggcgacttataggcagtggc-ttg 5932 Query: 597 gttaaggg 604 |||||||| Sbjct: 5931 gttaaggg 5924 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 36 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 96 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 155 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 156 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 215 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 216 atgggagcagcctaaaccgt 235 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 391 bits (197), Expect = e-105 Identities = 238/249 (95%), Gaps = 2/249 (0%) Strand = Plus / Plus Query: 189 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 248 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 249 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 307 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 308 tggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatgg 367 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatgg 179 Query: 368 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 427 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctggg 239 Query: 428 tgaccgata 436 ||||||||| Sbjct: 240 tgaccgata 248
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 383 bits (193), Expect = e-103 Identities = 263/282 (93%), Gaps = 7/282 (2%) Strand = Plus / Plus Query: 313 aaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcac 372 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgaccc-gagtagcatggggcac 61 Query: 373 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 121 Query: 433 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 492 |||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 122 gatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatag 181 Query: 493 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcg 552 ||| |||||||| | |||||||||||||||||||||| | | |||||| ||||| Sbjct: 182 aacatgaaaccg---taagctcccaagcagtgggaggggcccgggg--ctctga-ccgcg 235 Query: 553 tgcctgttgaagaatgagccggcgactcataggcagtggctt 594 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tgcctgttgaagaatgagccggcgactcataggcagtggctt 277
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 381 bits (192), Expect = e-102 Identities = 237/250 (94%), Gaps = 2/250 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79740 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 79682 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 79681 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 79623 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79622 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 79563 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 79562 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 79503 Query: 242 ggggttgtgg 251 |||||||||| Sbjct: 79502 ggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 371 bits (187), Expect = 2e-99 Identities = 201/205 (98%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75796 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75854 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 75855 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcggaatc 75914 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75915 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 75974 Query: 182 agcaaaagcgattcccgtagtagcg 206 ||||||||||||||||||||||||| Sbjct: 75975 agcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcgaactgaaacatcttag 164 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 341 bits (172), Expect = 2e-90 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccg 357 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgaccc-g 68 Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 69 agtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaa 128 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 129 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 188 Query: 478 tgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||||||||| ||||||||| Sbjct: 189 cggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 325 bits (164), Expect = 1e-85 Identities = 392/461 (85%), Gaps = 9/461 (1%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 221 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 280 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 281 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 340 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 341 cttatgctctgaccccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 400 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 401 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 460 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 461 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 501 |||||||||||||||| |||| |||||| |||||| ||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaa 520 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 551 cgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||| ||||||||||||| |||||||||||| | |||||| Sbjct: 563 cgtgcccgttgaagaatgagtcggcgactcataagtagtggc 604
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 305 bits (154), Expect = 9e-80 Identities = 196/210 (93%) Strand = Plus / Plus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 305 bits (154), Expect = 9e-80 Identities = 196/210 (93%) Strand = Plus / Minus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 305 bits (154), Expect = 9e-80 Identities = 196/210 (93%) Strand = Plus / Plus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 305 bits (154), Expect = 9e-80 Identities = 196/210 (93%) Strand = Plus / Plus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 280 bits (141), Expect = 5e-72 Identities = 217/239 (90%), Gaps = 5/239 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 671 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 | | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 672 atggaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 729 Score = 260 bits (131), Expect = 5e-66 Identities = 208/233 (89%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 135 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgggaagctga 193 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 194 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 253 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 313 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 314 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 280 bits (141), Expect = 5e-72 Identities = 217/239 (90%), Gaps = 5/239 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 379 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 438 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 439 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 498 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 499 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 554 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 | | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 555 atggaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612 Score = 270 bits (136), Expect = 5e-69 Identities = 210/234 (89%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 18 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 76 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 77 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 136 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 196 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 235 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 197 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 280 bits (141), Expect = 5e-72 Identities = 217/239 (90%), Gaps = 5/239 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 392 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 451 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 452 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 511 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 512 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 567 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 | | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 568 atggaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 625 Score = 270 bits (136), Expect = 5e-69 Identities = 210/234 (89%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 90 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 149 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 209 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 235 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 210 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 69.9 bits (35), Expect = 9e-09 Identities = 42/43 (97%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 529 ggggaaagtgatctctgacccgcgtgcctgttgaagaatgagc 571 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgacc-gcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 446 taccgtgagggaaaggtgaaaagaacc 472 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1590 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 1649 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1650 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 1709 Query: 138 acaacctggcgaactgaaac 157 |||||||||||||||||||| Sbjct: 1710 acaacctggcgaactgaaac 1729
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 262 bits (132), Expect = 1e-66 Identities = 159/164 (96%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 448 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 507 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 508 tgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaat 567 ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtggga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaat 107933 Query: 568 gagccggcgactcataggcagtggctttggttaagggaacggaa 611 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107932 gagccggcgactcataggcagtggc-ttggttaagggaacggaa 107890
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 258 bits (130), Expect = 2e-65 Identities = 215/240 (89%), Gaps = 5/240 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 553 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 554 ttttgatctctga-ccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 612 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 33 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 92 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 93 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 152 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||| |||| ||| ||||||| Sbjct: 213 ttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 258 bits (130), Expect = 2e-65 Identities = 215/240 (89%), Gaps = 5/240 (2%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 115109 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 115108 ttttgatctctga-ccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 115050 Score = 258 bits (130), Expect = 2e-65 Identities = 215/240 (89%), Gaps = 5/240 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 86879 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 86880 ttttgatctctga-ccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 86938 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 115630 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 115571 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 115570 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 115511 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115510 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 115451 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||| |||| ||| ||||||| Sbjct: 115450 ttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 86358 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 86417 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 86418 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 86477 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86478 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 86537 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||| |||| ||| ||||||| Sbjct: 86538 ttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 258 bits (130), Expect = 2e-65 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 31 cctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgc 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||||||| Sbjct: 90 gaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatc 149 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 cataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 209 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 210 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 269 Query: 242 ggggttgtgggagagc 257 |||||||||||||||| Sbjct: 270 ggggttgtgggagagc 285 Score = 244 bits (123), Expect = 3e-61 Identities = 224/253 (88%), Gaps = 6/253 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 381 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 440 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 441 taaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaaccc 500 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| ||||| || | |||| |||||||||||| || || Sbjct: 501 ccatcggggagtgaaatagaacatgaaatcg---taagctttcaagcagtggga-ggaga 556 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 557 attcaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc- 614 Query: 594 ttggttaagggaa 606 |||||||||||| Sbjct: 615 gtggttaagggaa 627
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 258 bits (130), Expect = 2e-65 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 125234 cctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgc 125176 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||||||| Sbjct: 125175 gaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatc 125116 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 125115 cataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 125056 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 125055 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 124996 Query: 242 ggggttgtgggagagc 257 |||||||||||||||| Sbjct: 124995 ggggttgtgggagagc 124980 Score = 258 bits (130), Expect = 2e-65 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 94632 cctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgc 94690 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||||||| Sbjct: 94691 gaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatc 94750 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 94751 cataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 94810 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 94811 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 94870 Query: 242 ggggttgtgggagagc 257 |||||||||||||||| Sbjct: 94871 ggggttgtgggagagc 94886 Score = 244 bits (123), Expect = 3e-61 Identities = 224/253 (88%), Gaps = 6/253 (2%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 124884 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 124825 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 124824 taaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaaccc 124765 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| ||||| || | |||| |||||||||||| || || Sbjct: 124764 ccatcggggagtgaaatagaacatgaaatcg---taagctttcaagcagtggga-ggaga 124709 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124708 attcaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc- 124651 Query: 594 ttggttaagggaa 606 |||||||||||| Sbjct: 124650 gtggttaagggaa 124638 Score = 244 bits (123), Expect = 3e-61 Identities = 224/253 (88%), Gaps = 6/253 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 94982 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 95041 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 95042 taaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaaccc 95101 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| ||||| || | |||| |||||||||||| || || Sbjct: 95102 ccatcggggagtgaaatagaacatgaaatcg---taagctttcaagcagtggga-ggaga 95157 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95158 attcaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc- 95215 Query: 594 ttggttaagggaa 606 |||||||||||| Sbjct: 95216 gtggttaagggaa 95228
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 256 bits (129), Expect = 7e-65 Identities = 214/239 (89%), Gaps = 5/239 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 338 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 397 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 398 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 457 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || ||| ||||||||||||| |||||||| | ||| |||||||||||||| | | Sbjct: 458 ccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggagaa 514 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 || |||||||| |||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 515 tag-aatctctga-ccgcgtgcctgttgaagaatgagccggcgacttataagtagtggc 571 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 23 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 81 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 82 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 141 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 142 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 202 tagcggcgagcgaaatgggagcagcctaaacc 233 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 250 bits (126), Expect = 5e-63 Identities = 223/250 (89%), Gaps = 9/250 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || | ||| |||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaaga 547 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 | ||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 548 a---gat-tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc- 601 Query: 594 ttggttaagg 603 |||||||||| Sbjct: 602 ttggttaagg 611 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 193 ttcccgtagtagcggcgagcgaa 215 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 248 bits (125), Expect = 2e-62 Identities = 233/265 (87%), Gaps = 8/265 (3%) Strand = Plus / Plus Query: 328 aaagcatcactagcttatgctctgaccccgagtagcatggggcacgtggaatcccgtgtg 387 |||| |||| ||||||||||| |||||| |||||||||||| |||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgaccc-gagtagcatgggacacgtggaatcccgtgtg 431 Query: 388 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 447 ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct: 432 aatcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagta 491 Query: 448 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 507 || |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | Sbjct: 492 ccatgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---a 548 Query: 508 tgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaat 567 | |||| ||||||||||||||| | | | ||||||| ||||||||||||||||||| Sbjct: 549 taagctaccaagcagtgggaggagcca---gggctctgac-cgcgtgcctgttgaagaat 604 Query: 568 gagccggcgactcataggcagtggc 592 |||||||||||||||| | |||||| Sbjct: 605 gagccggcgactcataagtagtggc 629 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 186 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 187 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 246 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 247 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 306 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 307 a 307 | Sbjct: 325 a 325
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 242 bits (122), Expect = 1e-60 Identities = 222/250 (88%), Gaps = 9/250 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| ||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga---gga 583 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 || ||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 584 aatagat-tctga-ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc- 640 Query: 594 ttggttaagg 603 |||||||||| Sbjct: 641 ttggttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 232 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 236 bits (119), Expect = 7e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 76 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 89837 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 89778 Query: 77 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 136 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 89777 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 89719 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 187 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89718 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 236 bits (119), Expect = 7e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 76 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 433 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 492 Query: 77 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 136 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 493 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 551 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 187 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 552 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 230 bits (116), Expect = 4e-57 Identities = 210/239 (87%), Gaps = 8/239 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| | |||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 aag----ccctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||| || |||||||| ||||||||||| || Sbjct: 18 cctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctgg 76 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 77 aaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 230 bits (116), Expect = 4e-57 Identities = 210/239 (87%), Gaps = 8/239 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| | |||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 aag----ccctga-ccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 75.8 bits (38), Expect = 2e-10 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||| || |||||||| ||||||||||| || Sbjct: 1784 cctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctgg 1842 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1843 aaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 226 bits (114), Expect = 7e-56 Identities = 145/154 (94%), Gaps = 1/154 (0%) Strand = Plus / Minus Query: 281 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 340 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 341 cttatgctctgaccccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 400 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgaccc-gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 211 Query: 401 caccttgcaaggctaaatactcctgggtgaccga 434 ||||||||||||||||||||||||| | |||||| Sbjct: 210 caccttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 218 bits (110), Expect = 2e-53 Identities = 180/202 (89%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccgag 359 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| | ||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactc-gag 390 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 391 tagcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaata 450 Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | || Sbjct: 451 ctcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactg 510 Query: 480 ggtagtgaaatagaacgtgaaa 501 || ||||||||||||| ||||| Sbjct: 511 gggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 9e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 102 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 161 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 162 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 221 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 222 gcagcctaaaccgtgaaaacggggttg 248 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 550 gcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 604 |||| ||||||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 574 gcgttcctgttgaagaatgagccggcgactcataagtagtggc-ttggttaaggg 627
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 4079 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 4138 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 4139 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 4197 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4198 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 4257 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||||||||||||||| |||||||| Sbjct: 4258 tgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 182 bits (92), Expect = 9e-43 Identities = 180/208 (86%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccg 357 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaaccca- 4428 Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||||||||| |||| | ||||| |||||||| || |||||||||| | ||||||||| Sbjct: 4429 agtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaa 4488 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4489 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 4548 Query: 478 tgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||| ||||| ||||||||| Sbjct: 4549 aggggagtgaaagagaacatgaaaccgt 4576 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4614 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 4671
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 164 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 182 bits (92), Expect = 9e-43 Identities = 180/208 (86%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccg 357 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaaccca- 395 Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||||||||| |||| | ||||| |||||||| || |||||||||| | ||||||||| Sbjct: 396 agtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaa 455 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 478 tgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||| ||||| ||||||||| Sbjct: 516 aggggagtgaaagagaacatgaaaccgt 543 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 638
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccg 504 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 38 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 97 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 98 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 157 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 158 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 217 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 218 gggagcagcctaaacc 233 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||||||||||||||||||||||||||||| Sbjct: 800 ccgcgtgcctgttgaagaatgagccggcgact 831
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 210 bits (106), Expect = 4e-51 Identities = 198/226 (87%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 579 ||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 551 -cctgagccctga-ccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 38 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 97 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 98 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 157 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 158 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 217 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 218 gggagcagcctaaaccg 234 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 210 bits (106), Expect = 4e-51 Identities = 205/238 (86%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||||||||||||||| || || ||| |||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| |||||| || ||| |||| ||| ||| | |||| |||| Sbjct: 106 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagag 165 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 225 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 226 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 478 tgggtagtgaaatagaacgtgaaacc 503 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 85.7 bits (43), Expect = 2e-13 Identities = 56/59 (94%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 570 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atggttaagggaa 627
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 210 bits (106), Expect = 4e-51 Identities = 188/214 (87%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||| || |||| || |||||| ||||||| ||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagag 164 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 182 bits (92), Expect = 9e-43 Identities = 180/208 (86%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccccg 357 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaaccca- 395 Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||||||||| |||| | ||||| |||||||| || |||||||||| | ||||||||| Sbjct: 396 agtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaa 455 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 478 tgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||| ||||| ||||||||| Sbjct: 516 aggggagtgaaagagaacatgaaaccgt 543 Score = 101 bits (51), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 638
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 129 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 188 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 189 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 233 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||||||||||||||||||||||||||||| Sbjct: 899 ccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 212 cgaaatgggagcagcctaaacc 233 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 590 ccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 381 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 382 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 441 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 442 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 501 Query: 495 cgtgaaa 501 | ||||| Sbjct: 502 catgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 547 ccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 551 cgtgcctgttgaagaatgagccggcgactcata 583 ||||| || |||||||||||||||| ||||||| Sbjct: 551 cgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 ag 222 || Sbjct: 245 ag 246 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 381 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 382 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 441 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 442 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 501 Query: 495 cgtgaaa 501 | ||||| Sbjct: 502 catgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 547 ccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 204 bits (103), Expect = 2e-49 Identities = 216/249 (86%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 478 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 537 ||| ||||||||||||| ||||||| | |||| |||||||||||||| ||| | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattg- 560 Query: 538 gatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttgg 597 | || |||| ||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 561 aacctttgac-cgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atgg 618 Query: 598 ttaagggaa 606 ||||||||| Sbjct: 619 ttaagggaa 627 Score = 190 bits (96), Expect = 4e-45 Identities = 201/236 (85%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||| || || ||||||| |||| Sbjct: 46 acgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 106 gaagattcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagag 165 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccc 225 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 226 tcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 478 tgggtagtgaaatagaacgtgaaacc 503 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| |||| Sbjct: 1813 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatcc 1872 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 1873 gaagattcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagag 1932 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 1933 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 1992 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1993 ttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 200 bits (101), Expect = 4e-48 Identities = 116/121 (95%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 374 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaaggc 433 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 434 taaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 493 Query: 474 c 474 | Sbjct: 494 c 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 131 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 190 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 191 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 87.7 bits (44), Expect = 4e-14 Identities = 54/56 (96%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 564 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggttaagg 618 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||| | | ||||||||||||||||||||||| ||| | || |||||| Sbjct: 46 acgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatcc 105 Query: 78 ggagat 83 |||||| Sbjct: 106 ggagat 111
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 212 cgaaatgggagcagcctaaacc 233 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 749 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 208 cgagcgaaatgggagcagcctaaac 232 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 584 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctagggttaagg 639 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 638 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 212 cgaaatgggagcagcctaaacc 233 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 601 |||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 597 ccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 151803 ccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 151758 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 42400 ccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 42445
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 638 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 208 cgagcgaaatgggagcagcctaaac 232 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 584 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctagggttaagg 639 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 572 ccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 617
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 657 ccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 702
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 196 bits (99), Expect = 6e-47 Identities = 166/187 (88%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgaccccgagtagcatggggcacgt 374 |||||||||| |||| |||| ||||||||||| |||||| |||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgaccc-gagtagcatgggacacgg 382 Query: 375 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 434 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 383 agaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaa 442 Query: 435 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 494 ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 443 tagtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaa 502 Query: 495 cgtgaaa 501 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 ag 222 || Sbjct: 245 ag 246 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcata 583 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 7/239 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga---gga 690 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| ||||| |||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 691 ttttgaaatctga-ccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 193 ttcccgtagtagcggcgagcgaaatggga 221 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 10 cctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctgg 68 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 69 aaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||||||||||||||||||||||||||||| Sbjct: 558 ccgcgtgcctgttgaagaatgagccggcgact 589
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 478 tgggtagtgaaatagaacgtgaaacc 503 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||| |||||| || || ||| |||||||| Sbjct: 3080 acgaagaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatcc 3139 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| |||||| || ||| |||| ||| ||| |||| |||| Sbjct: 3140 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagag 3199 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 3200 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 3259 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3260 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 85.7 bits (43), Expect = 2e-13 Identities = 56/59 (94%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 3604 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atggttaagggaa 3661
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||||||||||||||||||||||||||||| Sbjct: 25367 ccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 38 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 97 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 98 acct 101 |||| Sbjct: 24914 acct 24917
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 192 bits (97), Expect = 9e-46 Identities = 206/239 (86%), Gaps = 5/239 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||| |||||||| || | ||||||||||||| |||||||||| | ||||| Sbjct: 785 cccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaaggc 844 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||| Sbjct: 845 taaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaaccc 904 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||| |||||||| | |||| |||||||||||| | || Sbjct: 905 ccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtggga-gaaga 960 Query: 534 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 | | |||| ||| |||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 961 atctaatctttga-ccgcgtgcctgttgaagaatgagccggcgacttataagcagtggc 1018 Score = 172 bits (87), Expect = 9e-40 Identities = 187/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 235 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 357 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 416 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 417 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 476 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 477 gtgggtagtgaaatagaacgtgaaaccgt 505 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcatagg 585 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 192 bits (97), Expect = 9e-46 Identities = 217/252 (86%), Gaps = 10/252 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 531 | |||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggca 599 Query: 532 gaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 591 ||| || | |||||| |||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 600 aaaaaagagc-ctgacc-gcgtgcctattgaagaatgagccggcgacttatagggagtgg 657 Query: 592 ctttggttaagg 603 | |||||||||| Sbjct: 658 c-ttggttaagg 668 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 190 bits (96), Expect = 4e-45 Identities = 129/140 (92%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||| |||||||| || | |||||||||||| |||||||||| | ||||| Sbjct: 344 cccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcgtaaggc 403 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 404 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 463 Query: 474 ccagtgggtagtgaaataga 493 ||| |||| ||||||||||| Sbjct: 464 ccactggggagtgaaataga 483 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 200 agtagcggcgagcgaaatgggagcagcctaaacc 233 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 533 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 577 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcgg 53 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 550 gcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 591 gcgtgcctgttgaagaatgagccggcgacttataggaagtggct 634
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 188 bits (95), Expect = 1e-44 Identities = 210/240 (87%), Gaps = 10/240 (4%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 472 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 ||| || || ||||||||||||| ||||||||| | ||| ||||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggg 616 Query: 533 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| | |||| |||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 617 --tttga-ccctga-ccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 216/251 (86%), Gaps = 9/251 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 532 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 533 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| || |||| |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 564 aaa---atgcctga-ccgcgtgcctattgaagaatgagccggcgacttatagggagtggc 619 Query: 593 tttggttaagg 603 |||||||||| Sbjct: 620 -ttggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 188 bits (95), Expect = 1e-44 Identities = 158/177 (89%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 472 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 139 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 198 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 199 tagtagcggcgagcgaaatgggagcagcctaaac 232 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 73.8 bits (37), Expect = 6e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 604 ||||||||||||||||||||||||||||||||| || | |||||| ||||||||||| Sbjct: 543 ccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggc-ttggttaaggg 598
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 188 bits (95), Expect = 1e-44 Identities = 187/215 (86%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||| |||||||||||| ||||| | | ||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatcc 105 Query: 78 ggagattcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaaga 136 |||||||||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||| Sbjct: 106 ggagattcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataaga 164 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 196 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 165 gacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttc 224 Query: 197 cgtagtagcggcgagcgaaatgggagcagcctaaa 231 | ||||||||||||||||||||||| |||||||| Sbjct: 225 ctgagtagcggcgagcgaaatgggagaagcctaaa 259 Score = 182 bits (92), Expect = 9e-43 Identities = 134/148 (90%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||||||||| |||||| ||||||||||||||| || |||||||||| ||||||||||| Sbjct: 391 agtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgcaaggctaaa 450 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 451 tacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 510 Query: 478 tgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||| ||||| ||||||||| Sbjct: 511 aggggagtgaaaaagaacatgaaaccgt 538 Score = 77.8 bits (39), Expect = 4e-11 Identities = 55/59 (93%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 606 ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| Sbjct: 576 ccgcgtgcctgttgaagaatgagccggcgactcatagatagtggc-tgggttaagggaa 633
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 216/251 (86%), Gaps = 9/251 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 532 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 533 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 ||| || |||| |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 564 aaa---atgcctga-ccgcgtgcctattgaagaatgagccggcgacttatagggagtggc 619 Query: 593 tttggttaagg 603 |||||||||| Sbjct: 620 -ttggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 170937 ccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 170883 Score = 71.9 bits (36), Expect = 2e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 121989 ccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 122043 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||| |||||||| || ||||||| || Sbjct: 171488 cctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgg 171430 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 || |||| ||||||||||||||| |||||| |||||| Sbjct: 171429 aagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||| |||||||| || ||||||| || Sbjct: 121438 cctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgg 121496 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 || |||| ||||||||||||||| |||||| |||||| Sbjct: 121497 aagcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 580 ccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 634 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||| |||||||| || ||||||| || Sbjct: 29 cctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgg 87 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 || |||| ||||||||||||||| |||||| |||||| Sbjct: 88 aagcaagctctgatccggagattcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 472 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgt 505 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 182/218 (83%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||| | || |||||||| ||||||||||| || | | ||| | ||||| Sbjct: 33 acgatgaagggcgtggtaaccgacgaaacgcttcggggagctggatacgagctttgatcc 92 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc-aggcaaga 136 | |||||||| |||||| |||||| || ||| | | ||||| ||| ||| | | |||| Sbjct: 93 gaagattcccgaatagggcaacctcttggactccttagtgaattcat-agctaagaaaga 151 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 196 || |||| || ||| ||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 152 gataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcc 211 Query: 197 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 | ||||||||||||||||||||||| |||||||||||| Sbjct: 212 cttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||||||||||||||||||||||||||||| Sbjct: 633 ccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 23 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 82 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 83 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 142 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 143 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 202 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 203 agcggcgagcgaaatgggagcagcctaaaccg 234 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 87.7 bits (44), Expect = 4e-14 Identities = 54/56 (96%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 561 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggttaagg 615
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 178 bits (90), Expect = 1e-41 Identities = 155/176 (88%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||| || |||||||| ||||||||||| ||| Sbjct: 732 cctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcggggagctga 790 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||| ||||||||||||||| |||||| |||||| || |||| |||||||||| Sbjct: 791 aaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcctgctgaatt 850 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 177 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 cataggcaggatagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 106 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 107 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 166 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 167 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 226 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 227 ctaaacc 233 ||||||| Sbjct: 253 ctaaacc 259 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 586 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||| |||||||||||||| |||||||||| Sbjct: 430 ccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 106 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 107 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 166 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 167 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 226 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 227 ctaaacc 233 ||||||| Sbjct: 253 ctaaacc 259 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 593 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 586 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 357 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 416 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 417 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 476 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 477 gtgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcga 577 |||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 474 ccagt-gggtagtgaaatagaacgtgaaaccgt 505 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||| ||||||||||||||||||||||||||| Sbjct: 717 ccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcatagg 585 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcatagg 585 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 149 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 208 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 209 gagcgaaatgggagcagcctaaacc 233 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcatagg 585 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 176 bits (89), Expect = 6e-41 Identities = 202/233 (86%), Gaps = 10/233 (4%) Strand = Plus / Plus Query: 348 tctgaccccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 407 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| | Sbjct: 500 tctgatcccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcg 559 Query: 408 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa- 466 ||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| Sbjct: 560 taaggctaaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaat 619 Query: 467 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 526 ||||||||| || || ||||||||||||| ||||||||| | ||| ||||||||||| Sbjct: 620 agaaccccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtggg 675 Query: 527 agggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 579 ||||| | || | ||||| ||||||||||||||||||||||||||||||| Sbjct: 676 aggggtta---ga-ccctgac-cgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 472 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 473 cccagt-gggtagtgaaatagaacgtgaaacc 503 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 472 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 473 cccagt-gggtagtgaaatagaacgtgaaacc 503 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 41 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 100 ||||| |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| Sbjct: 136542 cgaaacgcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaacc 136601 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 |||||||| || |||||| ||| | ||||||| |||| | ||||||||||||| Sbjct: 136602 ctttaaactaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatc 136661 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 136662 ttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtggg 136721 Query: 221 agcagcctaaaccg 234 | |||||||||||| Sbjct: 136722 aacagcctaaaccg 136735 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Minus Query: 41 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 100 ||||| |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| Sbjct: 49002 cgaaacgcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaacc 48943 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 |||||||| || |||||| ||| | ||||||| |||| | ||||||||||||| Sbjct: 48942 ctttaaactaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatc 48883 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 48882 ttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtggg 48823 Query: 221 agcagcctaaaccg 234 | |||||||||||| Sbjct: 48822 aacagcctaaaccg 48809 Score = 63.9 bits (32), Expect = 6e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||| ||||||||||||||||| ||||||| ||||| |||||| |||||||||| Sbjct: 137056 ccgcgttcctgttgaagaatgagctggcgacttatagggagtggc-ttggttaagg 137110 Score = 63.9 bits (32), Expect = 6e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||| ||||||||||||||||| ||||||| ||||| |||||| |||||||||| Sbjct: 48488 ccgcgttcctgttgaagaatgagctggcgacttatagggagtggc-ttggttaagg 48434
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagtaccc 703 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | ||| ||||||||||||| ||||||||| Sbjct: 704 ctgtgggggagtgaaatagaacatgaaaccgt 735 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 ||||||||||||||||||||||||| |||||| ||||| ||||| |||||||||| Sbjct: 772 ccgcgtgcctgttgaagaatgagcctgcgacttataggaagtggtattggttaagg 827
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 381 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 440 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 441 taaatactcttgggtgaccgatagcgaaacagtaccgtgagggaaaggtgaaaagaacct 500 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | ||| ||||||||||| | ||||||||| Sbjct: 501 catcaggggagtgaaatagaccatgaaaccgt 532 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 552 gtgcctgttgaagaatgagccggcgactcataggcagtggctt 594 |||||||||||||||||||| ||||||| ||||| || ||||| Sbjct: 572 gtgcctgttgaagaatgagctggcgacttatagggagaggctt 614
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 624 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 683 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 684 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 743 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | || ||||||||||||| ||||||||| Sbjct: 744 ttgttagggagtgaaatagaacatgaaaccgt 775 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 811 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 855 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaaccc 636 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | ||| ||||||||||||| ||||||||| Sbjct: 637 ctgtgggggagtgaaatagaacatgaaaccgt 668 Score = 137 bits (69), Expect = 5e-29 Identities = 162/193 (83%) Strand = Plus / Plus Query: 41 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 100 ||||| ||||||||||| || || |||| | |||||| |||||||| |||||| ||||| Sbjct: 67 cgaaacgcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacc 126 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 | ||||||| ||| ||| ||| ||| |||||| |||| | ||||||||||||| Sbjct: 127 tattaaacttcctatacaattcatatttaggaaagagagaacccagtgaactgaaacatc 186 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 187 taagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaactggg 246 Query: 221 agcagcctaaacc 233 | ||||||||||| Sbjct: 247 atcagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 704 ccgcgtgcctattgaagaatgagccggcgacttatagggagtggc-ttggttaagg 758
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 459 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 518 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 519 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 578 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | || ||||||||||||| ||||||||| Sbjct: 579 ttgttagggagtgaaatagaacatgaaaccgt 610 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 592 |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 646 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 690 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || |||| ||||||||||||| ||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgt 660 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 695 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggttttggttaagg 750
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || |||| ||||||||||||| ||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgt 587 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 603 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 622 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggttttggttaagg 677
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 174 bits (88), Expect = 2e-40 Identities = 134/148 (90%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 |||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||| Sbjct: 484 agtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaa 543 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 476 |||||||| ||||||||||||||| ||||||| |||||||||||||||| |||| ||| | Sbjct: 544 tactcctgagtgaccgatagcgaactagtaccatgagggaaaggtgaaatagaatcccga 603 Query: 477 gtgggtagtgaaatagaacgtgaaaccg 504 | ||| |||||||||||| |||||||| Sbjct: 604 gagggaagtgaaatagaaaatgaaaccg 631 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 161 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgag 220 Query: 212 cgaaatgggagcagcctaaaccg 234 |||| |||| |||||||||||| Sbjct: 221 cgaacagggaacagcctaaaccg 243 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 548 ccgcgtgcctgttgaagaatgagccggcgact 579 |||||||||||||||||||||||||||||||| Sbjct: 669 ccgcgtgcctgttgaagaatgagccggcgact 700 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,220,261 Number of Sequences: 3902068 Number of extensions: 4220261 Number of successful extensions: 121554 Number of sequences better than 10.0: 26620 Number of HSP's better than 10.0 without gapping: 26444 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 76815 Number of HSP's gapped (non-prelim): 42304 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
