Clone Name | basd2m19 |
---|---|
Clone Library Name | barley_pub |
>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C| Length = 162 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +1 Query: 151 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 264 AK+ A ++P C +LP TFD E ++S+ L+IQT Sbjct: 66 AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103
>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10| Length = 105 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 208 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 336 LK FDQ + RS ++TA+R+ +V PLP + Y +L Sbjct: 12 LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54
>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 306 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +1 Query: 241 SFLLHIQTARRSHPDIVFGFP 303 S LL TA R HPD VFGFP Sbjct: 76 SRLLDASTAHRIHPDWVFGFP 96
>ATG9_YEAST (Q12142) Autophagy-related protein 9 (Cytoplasm to vacuole| targeting protein 7) Length = 997 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 150 HPLTPLEHSLRVPGKNWYGNPFPSAPTCSGSDLKN 46 H ++P +S R PGKNW N +G D+KN Sbjct: 896 HNISPAIYSTRNPGKNWDNNN-------NGDDIKN 923
>RS10_CHLTR (P0A4A1) 30S ribosomal protein S10| Length = 105 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 208 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 336 LK FDQ + +S ++TA+R+ +V PLP + Y +L Sbjct: 12 LKGFDQGQLDQSTANIVETAKRTGARVVGPIPLPTKREVYTVL 54
>RS10_CHLMU (P0A4A2) 30S ribosomal protein S10| Length = 105 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 208 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 336 LK FDQ + +S ++TA+R+ +V PLP + Y +L Sbjct: 12 LKGFDQGQLDQSTANIVETAKRTGARVVGPIPLPTKREVYTVL 54
>RS10_CHLCV (Q824F9) 30S ribosomal protein S10| Length = 105 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 208 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 336 LK FDQ + RS ++TA+R+ + PLP + Y +L Sbjct: 12 LKGFDQGQLDRSTADIVETAKRTGARVAGPIPLPTKREVYTVL 54
>PPR3D_HUMAN (O95685) Protein phosphatase 1 regulatory subunit 3D (Protein| phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6) Length = 299 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -2 Query: 120 RVPGKNWYGNPFPSAPTCSGSDLKNSPLSRHRSRALPTSP 1 R PG G P P SG D + P+ R+R+LP+SP Sbjct: 42 RPPGSP--GRAPPPTPAPSGCDPRLRPIILRRARSLPSSP 79
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -2 Query: 138 PLEHSLRVPGKNWYGNPFPSAPTCSGSDLKNSPLSRHRSRALPT 7 PL S VPG W G S+ SGS ++ PL++ RS +P+ Sbjct: 727 PLHKSQSVPGA-WPGASPLSSQPLSGSSRQSHPLTQSRSGYIPS 769
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -2 Query: 138 PLEHSLRVPGKNWYGNPFPSAPTCSGSDLKNSPLSRHRSRALPT 7 PL S VPG W G S+ SGS ++ PL++ RS +P+ Sbjct: 730 PLHKSQSVPGA-WPGASPLSSQPFSGSSCQSHPLTQSRSGYIPS 772
>FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein| Length = 90 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 370 SQRDW--WEKRVRIKLH-KNPKLREGESQKRYQ---DGFFAQFEYAAENFFAPPA 224 SQ+ W W+K + ++ K + E +K Q D FFA EYA + PPA Sbjct: 35 SQKAWADWQKHQTMLINEKRLNMMNAEDRKFLQAEMDKFFAGEEYAQAEGYVPPA 89
>MLO11_ARATH (Q9FI00) MLO-like protein 11 (AtMlo11)| Length = 573 Score = 27.7 bits (60), Expect = 7.1 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = +2 Query: 185 RSSPRLQH*RRSTSWRRKEVFCCIFKLREEAILISFLAF-------PFP*FRIFMQFYSD 343 RS RL R T +RK +F + K++EE +L+ F++ + FY+D Sbjct: 42 RSIYRLSTWLRKT--KRKPMFAALEKMKEELMLLGFISLLLTATSSTIANICVPSSFYND 99 Query: 344 SFLP 355 FLP Sbjct: 100 RFLP 103
>NR4A1_MOUSE (P12813) Orphan nuclear receptor NR4A1 (Orphan nuclear receptor| HMR) (Nuclear hormone receptor NUR/77) (N10 nuclear protein) Length = 601 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Frame = -2 Query: 153 CHPLT---PLEHSLRVPGKNWYGNPFPSAPTCSGSDLKNSPLS 34 C+P T PL+ +L G +YG+P SAP+ S + + S LS Sbjct: 113 CYPGTLSGPLDETLSSSGSEYYGSPC-SAPSPSTPNFQPSQLS 154
>XKDO_BACSU (P54334) Phage-like element PBSX protein xkdO| Length = 1332 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Frame = -2 Query: 147 PLTPLEHSLRVPG----KNWYGNPFPSAPTCSGSDLKN 46 P +L+VPG + G P SAP SGS LKN Sbjct: 335 PTKAPNRTLKVPGEVIRRRQSGTPAESAPRTSGSKLKN 372
>SRG69_CAEEL (Q19258) Serpentine receptor class gamma-69 (Protein srg-69)| Length = 342 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +3 Query: 237 KKFSAAYSNCAKKPS*Y---RFWLSPSRSLGFLCNFILTLFSHQSLWL 371 K FS Y+ CA Y F + LGF C IL F + W+ Sbjct: 48 KSFSLLYTCCAALSLTYFLDHFLIRRFVKLGFFCEIILENFGEPNYWM 95
>VE6_HPV36 (P50810) Protein E6| Length = 157 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 4/36 (11%) Frame = -2 Query: 288 DIRMASSRSL---NMQQKTSLR-LQLVERLQCCSRG 193 DI +A+ RS+ +++ +T L L ++E+L CC RG Sbjct: 98 DIELAAGRSIFEIDIRCQTCLAFLDIIEKLDCCGRG 133
>STE12_YEAST (P13574) Protein STE12| Length = 688 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 280 DGFFAQFEYAAENFFAPPAGRTSSML*PRGAS 185 D Q Y A++FF PP G ++ML P+ A+ Sbjct: 472 DPLLDQAFYGADDFFFPPEGCDNNMLYPQTAT 503
>IDI_STRCO (Q9X7Q6) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 197 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 196 SATALKTFDQLEAQRSFLLHIQTARRSHPDIVFG 297 +A A +TF++L S L T R +HPD G Sbjct: 94 AAAARRTFEELGVSPSLLAEAGTVRYNHPDPASG 127
>PRGR_CHICK (P07812) Progesterone receptor (PR)| Length = 786 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 299 KPKTISGWLLRAV*ICSRKLLCASSWSNV 213 KP+T S L +C R+LLC WS + Sbjct: 560 KPETPSSLLTSLNHLCERQLLCVVKWSKL 588
>TDRD4_HUMAN (Q9NUY9) Tudor domain-containing protein 4| Length = 633 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +3 Query: 204 SIEDVRPAGGAKKFSAAYSNC 266 S+ D+RPAGG+ K++A +C Sbjct: 81 SLVDIRPAGGSDKWTATACDC 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,436,641 Number of Sequences: 219361 Number of extensions: 1035903 Number of successful extensions: 2601 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2566 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2601 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)