>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds
          Length = 1260

 Score = 77.8 bits (39), Expect = 2e-12
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 1   ggtggagagcttgaacaagataaatggcggggtagctggtggacctgtcggtgca 55
           |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 585 ggtggagagcttgaacaagataaatggcgggg-agctggttgacctgtccgtgca 638

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     gctggtggacctgtcggtgc 54
              ||||||||||||||||||||
Sbjct: 113613 gctggtggacctgtcggtgc 113594

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      gctggtggacctgtcggtgc 54
               ||||||||||||||||||||
Sbjct: 6289475 gctggtggacctgtcggtgc 6289494

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 34      agctggtggacctgtcgg 51
               ||||||||||||||||||
Sbjct: 5402875 agctggtggacctgtcgg 5402858

>gb|AY300819.1| Bovine papillomavirus isolate BAPV3 major capsid protein L1 gene,
           partial cds
          Length = 416

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 2   gtggagagcttgaacaag 19
           ||||||||||||||||||
Sbjct: 365 gtggagagcttgaacaag 382

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 34      agctggtggacctgtcgg 51
               ||||||||||||||||||
Sbjct: 4411994 agctggtggacctgtcgg 4411977

>ref|XM_794824.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC576628 (LOC576628), mRNA
          Length = 1326

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 33  tagctggtggacctgtcg 50
           ||||||||||||||||||
Sbjct: 546 tagctggtggacctgtcg 529

>gb|AC091921.3| Homo sapiens chromosome 5 clone RP11-256N5, complete sequence
          Length = 172192

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     ggagagcttgaacaagat 21
             ||||||||||||||||||
Sbjct: 25091 ggagagcttgaacaagat 25108

>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105
          Length = 340000

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 9      gcttgaacaagataaatg 26
              ||||||||||||||||||
Sbjct: 238149 gcttgaacaagataaatg 238132

>gb|AC013401.10| Homo sapiens BAC clone RP11-98N11 from 2, complete sequence
          Length = 168595

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 7     gagcttgaacaagataaa 24
             ||||||||||||||||||
Sbjct: 56499 gagcttgaacaagataaa 56516

>gb|AC113414.3| Homo sapiens chromosome 5 clone RP11-541P9, complete sequence
          Length = 166950

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      ggagagcttgaacaagat 21
              ||||||||||||||||||
Sbjct: 119648 ggagagcttgaacaagat 119665

>emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 map q21.2, complete
              sequence
          Length = 241304

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 9      gcttgaacaagataaatg 26
              ||||||||||||||||||
Sbjct: 180912 gcttgaacaagataaatg 180895

>dbj|AP001038.2| Homo sapiens genomic DNA, chromosome 21, clone:P178O22, ERG-ETS2 region,
              complete sequence
          Length = 141885

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 9      gcttgaacaagataaatg 26
              ||||||||||||||||||
Sbjct: 112563 gcttgaacaagataaatg 112546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 340,234
Number of Sequences: 3902068
Number of extensions: 340234
Number of successful extensions: 23427
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23384
Number of HSP's gapped (non-prelim): 43
length of query: 58
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 37
effective length of database: 17,151,101,840
effective search space: 634590768080
effective search space used: 634590768080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)