ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2n17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X94296.1|HVRL24E H.vulgare mRNA for L24 ribosomal protein Length = 708 Score = 969 bits (489), Expect = 0.0 Identities = 496/497 (99%), Gaps = 1/497 (0%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctg 71 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 gctttgctggacagcaatgtacagg-aagcagcacaagaaggacatccatgctgaggctg 271 Query: 72 ccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacac 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacac 331 Query: 132 tggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 tggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaag 391 Query: 192 ccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaaga 451 Query: 252 aggcagaggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 aggcagaggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggtt 511 Query: 312 ccaagggcccaaagcttggcggtggcggcggcaagcgttgaaagtcgattacatcataga 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 ccaagggcccaaagcttggcggtggcggcggcaagcgttgaaagtcgattacatcataga 571 Query: 372 catagagttgtgctgcctagccttgtttcttatcctatcctactatcatagacctttctc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 catagagttgtgctgcctagccttgtttcttatcctatcctactatcatagacctttctc 631 Query: 432 aagttaccttgccctcttgaatttgcaccttttctgtgaggctgaatggtcttaacgttt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 aagttaccttgccctcttgaatttgcaccttttctgtgaggctgaatggtcttaacgttt 691 Query: 492 tggattgtctcgatgag 508 ||||||||||||||||| Sbjct: 692 tggattgtctcgatgag 708
>gb|BT016791.1| Zea mays clone Contig624 mRNA sequence Length = 772 Score = 347 bits (175), Expect = 2e-92 Identities = 298/337 (88%), Gaps = 4/337 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||| Sbjct: 261 ctggacagcaatgtacagg-aagcagcacaagaaggacatccatgctgaagctgtcaaga 319 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||| ||||||||||||||||||| |||| ||||| ||||| | |||||| Sbjct: 320 agaggcgccgcgccaccaagaagccgtactcgaggtccattgtgggtgcttccttggaag 379 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | |||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 380 tgatccagaagaagagagctgagaagcctgaggtccgtgatgctgctagagaagctgctc 439 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 440 ttcgtgagatcaaggagcgcatcaagaagaccaaggacgagaagaaggcgaagaaggctg 499 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 ||||| |||||||||||||| | ||| | ||||| || || ||||| |||||||||| Sbjct: 500 aggtgtccaagtcccagaaggcgcagacg---aagggcgctgtccagaaaggttccaagg 556 Query: 318 gcccaaagcttggcggtggcggcggcaagcgttgaaa 354 |||| ||| | ||||| ||||| ||||| || ||||| Sbjct: 557 gccccaagttgggcggcggcggtggcaaacgctgaaa 593
>gb|BT018224.1| Zea mays clone EL01N0561E06.c mRNA sequence Length = 767 Score = 333 bits (168), Expect = 4e-88 Identities = 297/338 (87%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||| Sbjct: 256 ctggacagcaatgtacagg-aagcagcccaagaaggatatccatgctgaggctgtcaaga 314 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||| ||||||||||||| ||||| |||| ||||| ||||| | || || | Sbjct: 315 agaggcgccgcgccaccaagaagccatactcgaggtccattgtgggtgcttccctagagg 374 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | |||||||| ||||||||||||||||| || ||||| |||||||| |||||||| |||| Sbjct: 375 tgatccagaaaaagagggctgagaagcccgaggtccgcgatgctgctagagaagctgctc 434 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 435 ttcgcgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggcgaaaaaggctg 494 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 |||||||||||||||||||| ||||| | ||||| || || |||||||||||||||| Sbjct: 495 aggtgaccaagtcccagaaggcacagacg---aagggagcggtccagaagggttccaagg 551 Query: 318 gcccaaagcttggcggtggcggcggcaagcgttgaaag 355 |||| ||| | || |||||||| |||||||| |||||| Sbjct: 552 gccccaagttgggtggtggcggtggcaagcgctgaaag 589
>dbj|AK101927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071P12, full insert sequence Length = 843 Score = 329 bits (166), Expect = 6e-87 Identities = 242/266 (90%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||| ||||||||| |||||||||||||||||||| |||||||| |||| ||||| Sbjct: 242 ctggacagctatgtacagg-aagcagcacaagaaggacattcatgctgaagctgtcaaga 300 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| Sbjct: 301 agaggcgtcgcaccaccaagaagccatactcacggtcaattgttggtgctacactggaag 360 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 ||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 361 ttatccaaaagaagaggagtgagaaacctgaagtccgtgatgcagccagagaagcggctc 420 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 | |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 421 tccgtgagatcaaggagcgcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcag 480 Query: 258 aggtgaccaagtcccagaagtcacag 283 ||||| | || || |||||| ||||| Sbjct: 481 aggtggcaaaatctcagaagacacag 506
>dbj|AK058612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A11, full insert sequence Length = 781 Score = 329 bits (166), Expect = 6e-87 Identities = 242/266 (90%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||| ||||||||| |||||||||||||||||||| |||||||| |||| ||||| Sbjct: 241 ctggacagctatgtacagg-aagcagcacaagaaggacattcatgctgaagctgtcaaga 299 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| Sbjct: 300 agaggcgtcgcaccaccaagaagccatactcacggtcaattgttggtgctacactggaag 359 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 ||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 360 ttatccaaaagaagaggagtgagaaacctgaagtccgtgatgcagccagagaagcggctc 419 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 | |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 420 tccgtgagatcaaggagcgcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcag 479 Query: 258 aggtgaccaagtcccagaagtcacag 283 ||||| | || || |||||| ||||| Sbjct: 480 aggtggcaaaatctcagaagacacag 505
>dbj|AK059430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F02, full insert sequence Length = 779 Score = 321 bits (162), Expect = 1e-84 Identities = 294/336 (87%), Gaps = 4/336 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||| ||||||||| ||||||||||||||||| ||||||||||| |||| ||||| Sbjct: 253 ctggacagccatgtacagg-aagcagcacaagaaggatatccatgctgaagctgtcaaga 311 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||||||||||||||||| ||||| |||| ||||||||||| | |||||| Sbjct: 312 agaggcgccgcaccaccaagaagccatactctaggtcaattgttggtgcttcgttggaag 371 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | ||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||| |||| Sbjct: 372 tcatccaaaagaagagagctgaaaagcctgaagttcgtgatgctgctagagaagctgctc 431 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 432 ttcgtgagatcaaggaacgcatcaagaagaccaaggatgaaaagaaggcgaagaaggctg 491 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 |||| ||||||||||||||||| ||| | |||||||||| | || ||||||||||| Sbjct: 492 aggtaaccaagtcccagaagtcgcagtcg---aagggtgccgccccgaggggttccaagg 548 Query: 318 gcccaaagcttggcggtggcggcggcaagcgttgaa 353 |||| ||| |||| ||||| || || ||||| |||| Sbjct: 549 gcccgaagattggtggtggtggtggaaagcgctgaa 584
>ref|XM_475453.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 319 bits (161), Expect = 6e-84 Identities = 281/319 (88%), Gaps = 4/319 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||| ||||||||| ||||||||||||||||| ||||||||||| |||| ||||| Sbjct: 156 ctggacagccatgtacagg-aagcagcacaagaaggatatccatgctgaagctgtcaaga 214 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||||||||||||||||| ||||| |||| ||||||||||| | |||||| Sbjct: 215 agaggcgccgcaccaccaagaagccatactctaggtcaattgttggtgcttcgttggaag 274 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | ||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||| |||| Sbjct: 275 tcatccaaaagaagagagctgaaaagcctgaagttcgtgatgctgctagagaagctgctc 334 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 335 ttcgtgagatcaaggaacgcatcaagaagaccaaggatgaaaagaaggcgaagaaggctg 394 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 |||| ||||||||||||||||| ||| | |||||||||| | || ||||||||||| Sbjct: 395 aggtaaccaagtcccagaagtcgcagtcg---aagggtgccgccccgaggggttccaagg 451 Query: 318 gcccaaagcttggcggtgg 336 |||| ||| |||| ||||| Sbjct: 452 gcccgaagattggtggtgg 470
>gb|AY109363.1| Zea mays CL303_3 mRNA sequence Length = 1436 Score = 303 bits (153), Expect = 3e-79 Identities = 292/338 (86%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 970 ctggacagcaatgtacagg-aagcagcacaagaaggatatccatgctgaggctgtcaaga 1028 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||| ||| ||||||||| ||||| |||| ||||| ||||| | || || | Sbjct: 1029 agaggcgccgcgccaacaagaagccatactcgaggtccattgtgggtgcttccctagagg 1088 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | |||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||| Sbjct: 1089 tgatccagaagaagagggctgagaagcccgaggtccgcgatgctgctagagaagctgctc 1148 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 |||| |||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 1149 ttcgcgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggcgnnnnnggctg 1208 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 |||||||||||||||||||| | ||| | ||||| || || |||||||||||||||| Sbjct: 1209 aggtgaccaagtcccagaaggcgcagacg---aagggagcggtccagaagggttccaagg 1265 Query: 318 gcccaaagcttggcggtggcggcggcaagcgttgaaag 355 |||| ||| | || || ||||| |||||||| |||||| Sbjct: 1266 gccccaagttgggtggcggcggtggcaagcgctgaaag 1303
>gb|BT016435.1| Zea mays clone Contig268 mRNA sequence Length = 793 Score = 301 bits (152), Expect = 1e-78 Identities = 293/338 (86%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||||||||||||| ||||||||||||||||| ||||||||||| || | |||| Sbjct: 269 ctggacagcaatgtacagg-aagcagcacaagaaggatatccatgctgaagcggtaaaga 327 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||| ||||||||||||| ||||| |||| ||||| ||||| | |||||| Sbjct: 328 agaggcgccgcgccaccaagaagccatactccaggtcaattgtgggtgcttccttggaag 387 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| |||| Sbjct: 388 taatccagaagaagagagctgagaagccagaggtccgcgatgctgctagagaagctgctc 447 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | Sbjct: 448 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaagcgaagaaggcgg 507 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 |||||| ||||||||||||| | || | |||||||| || |||||||||||||||| Sbjct: 508 aggtgagcaagtcccagaagacgca---gacaaagggtgcggtccagaagggttccaagg 564 Query: 318 gcccaaagcttggcggtggcggcggcaagcgttgaaag 355 |||| ||| | ||||| || || || ||||| |||||| Sbjct: 565 gccccaagttgggcggcggtggtgggaagcgctgaaag 602
>gb|BT017947.1| Zea mays clone EL01N0521F01.c mRNA sequence Length = 859 Score = 301 bits (152), Expect = 1e-78 Identities = 293/338 (86%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaaga 77 ||||||||||||||||||| ||||||||||||||||| ||||||||||| || | |||| Sbjct: 323 ctggacagcaatgtacagg-aagcagcacaagaaggatatccatgctgaagcggtaaaga 381 Query: 78 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 137 ||||||||||| ||||||||||||| ||||| |||| ||||| ||||| | |||||| Sbjct: 382 agaggcgccgcgccaccaagaagccatactccaggtcaattgtgggtgcttccttggaag 441 Query: 138 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 197 | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| |||| Sbjct: 442 taatccagaagaagagagctgagaagccagaggtccgcgatgctgctagagaagctgctc 501 Query: 198 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 257 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | Sbjct: 502 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaagcgaagaaggcgg 561 Query: 258 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 317 |||||| ||||||||||||| | || | |||||||| || |||||||||||||||| Sbjct: 562 aggtgagcaagtcccagaagacgca---gacaaagggtgcggtccagaagggttccaagg 618 Query: 318 gcccaaagcttggcggtggcggcggcaagcgttgaaag 355 |||| ||| | ||||| || || || ||||| |||||| Sbjct: 619 gccccaagttgggcggcggtggtgggaagcgctgaaag 656
>gb|BT018227.1| Zea mays clone EL01N0561F11.c mRNA sequence Length = 1335 Score = 299 bits (151), Expect = 5e-78 Identities = 267/305 (87%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 51 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 110 |||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||| Sbjct: 810 aggatatccatgctgaggctgtcaagaagaggcgccgcgccaccaagaagccatactcga 869 Query: 111 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 170 |||| ||||| ||||| | || || || |||||||||||||||||||||||||| || | Sbjct: 870 ggtccattgtgggtgcttccctagaggtgatccagaagaagagggctgagaagcccgagg 929 Query: 171 tccgtgatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagacca 230 |||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 930 tccgcgatgctgctagagaagctgctcttcgcgagatcaaggagcgcatcaagaagacca 989 Query: 231 aggatgagaagaaggccaagaaggcagaggtgaccaagtcccagaagtcacaggggggca 290 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||| | | Sbjct: 990 aggatgagaagaaggcgaaaaaggctgaggtgaccaagtcccagaaggcacagacg---a 1046 Query: 291 agggtgccgtgcagaagggttccaagggcccaaagcttggcggtggcggcggcaagcgtt 350 |||| || || |||||||||||||||||||| ||| | || |||||||| |||||||| | Sbjct: 1047 agggagcggtccagaagggttccaagggccccaagttgggtggtggcggtggcaagcgct 1106 Query: 351 gaaag 355 ||||| Sbjct: 1107 gaaag 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaagg 53 ||||||||||||||||||| |||||||||||||||| Sbjct: 210 ctggacagcaatgtacagg-aagcagcacaagaagg 244
>ref|NM_186639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 248 bits (125), Expect = 2e-62 Identities = 215/244 (88%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 19 tggacagcaatgtacaggnaagcagcacaagaaggacatccatgctgaggctgccaagaa 78 |||||||| |||||||| ||||||||||||||||| || || || ||||| | |||||| Sbjct: 154 tggacagccatgtacag-aaagcagcacaagaaggatattcacgccgaggcagtcaagaa 212 Query: 79 gaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaagt 138 ||||||||||||||||||||| |||||||| ||||| || |||||||| || || ||||| Sbjct: 213 gaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctacccttgaagt 272 Query: 139 tatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctct 198 |||||||||||||| ||||||||||| || || |||||||| || || ||| ||||||| Sbjct: 273 catccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatccgctct 332 Query: 199 tcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcaga 258 |||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 333 tcgtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcaga 392 Query: 259 ggtg 262 |||| Sbjct: 393 ggtg 396
>dbj|AB118010.1| Oryza sativa (japonica cultivar-group) bip123 mRNA for BRI1-KD interacting protein 123, partial cds Length = 461 Score = 196 bits (99), Expect = 6e-47 Identities = 147/163 (90%) Strand = Plus / Plus Query: 121 tggtgccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgc 180 |||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 1 tggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaagtccgtgatgc 60 Query: 181 tgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaa 240 ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 agccagagaagcggctctccgtgagatcaaggagcgcatcaagaaaaccaaggatgagaa 120 Query: 241 gaaggccaagaaggcagaggtgaccaagtcccagaagtcacag 283 ||||| ||||||||||||||| | || || |||||| ||||| Sbjct: 121 aaaggcaaagaaggcagaggtggcaaaatctcagaagacacag 163
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 3e-45 Identities = 135/148 (91%) Strand = Plus / Plus Query: 51 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 110 ||||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 34677705 aggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaagccatactcac 34677764 Query: 111 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 170 |||| ||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| Sbjct: 34677765 ggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaag 34677824 Query: 171 tccgtgatgctgccagagaagccgctct 198 |||||||||| ||||||||||| ||||| Sbjct: 34677825 tccgtgatgcagccagagaagcggctct 34677852 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 34678213 gtgagatcaaggagcgcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcagagg 34678272 Query: 261 tgaccaagtcccagaagtcacag 283 || | || || |||||| ||||| Sbjct: 34678273 tggcaaaatctcagaagacacag 34678295 Score = 48.1 bits (24), Expect = 0.032 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaagg 53 ||||||||| ||||||||| |||||||||||||||| Sbjct: 34677199 ctggacagctatgtacagg-aagcagcacaagaagg 34677233
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 190 bits (96), Expect = 3e-45 Identities = 135/148 (91%) Strand = Plus / Plus Query: 51 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 110 ||||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 129722 aggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaagccatactcac 129781 Query: 111 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 170 |||| ||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| Sbjct: 129782 ggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaag 129841 Query: 171 tccgtgatgctgccagagaagccgctct 198 |||||||||| ||||||||||| ||||| Sbjct: 129842 tccgtgatgcagccagagaagcggctct 129869 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 130230 gtgagatcaaggagcgcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcagagg 130289 Query: 261 tgaccaagtcccagaagtcacag 283 || | || || |||||| ||||| Sbjct: 130290 tggcaaaatctcagaagacacag 130312 Score = 48.1 bits (24), Expect = 0.032 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaagg 53 ||||||||| ||||||||| |||||||||||||||| Sbjct: 129216 ctggacagctatgtacagg-aagcagcacaagaagg 129250
>gb|AF298827.1|AF298827 Prunus avium 60S ribosomal protein L24 (RL24) mRNA, complete cds Length = 690 Score = 176 bits (89), Expect = 5e-41 Identities = 161/185 (87%) Strand = Plus / Plus Query: 74 aagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactg 133 ||||||||| | || |||||||||||||| |||||| |||| ||||| ||||||||||| Sbjct: 259 aagaagaggagacgtaccaccaagaagccttactcaaggtctattgtgggtgccacactc 318 Query: 134 gaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagcc 193 || ||||||||||||| ||| |||||||||| || || ||||||||||| || ||||| Sbjct: 319 gaggttatccagaagaggagaactgagaagcccgaggttcgtgatgctgcaagggaagct 378 Query: 194 gctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaag 253 ||||| ||||| ||||||||| | |||||||| ||||||||||| ||||||||||||||| Sbjct: 379 gctctccgtgaaatcaaggagaggatcaagaaaaccaaggatgaaaagaaggccaagaag 438 Query: 254 gcaga 258 ||||| Sbjct: 439 gcaga 443
>ref|NM_115162.2| Arabidopsis thaliana structural constituent of ribosome AT3G53020 mRNA, complete cds Length = 787 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 340 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 399 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 400 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 459 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 460 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 504
>gb|AY093180.1| Arabidopsis thaliana 60S ribosomal protein-like (At3g53020) mRNA, complete cds Length = 728 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 294 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 353 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 354 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 413 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 414 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 458
>dbj|AB199790.1| Arabidopsis thaliana STV1 mRNA for ribosomal protein L24, complete cds Length = 684 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 275 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 334 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 335 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 394 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 395 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 439
>gb|AY058129.1| Arabidopsis thaliana AT3g53020/F8J2_190 mRNA, complete cds Length = 787 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 340 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 399 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 400 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 459 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 460 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 504
>gb|BT006545.1| Arabidopsis thaliana At3g53020 gene, complete cds Length = 492 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 227 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 286 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 287 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 346 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 347 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 391
>emb|BX822812.1|CNS0A77L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 261 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 320 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 321 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 380 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 381 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 425
>emb|BX826253.1|CNS0A6AJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 765 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 318 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 377 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 378 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 437 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 438 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 482
>emb|BX821500.1|CNS0A99G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 159 bits (80), Expect = 1e-35 Identities = 140/160 (87%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| || Sbjct: 259 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcgg 318 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 319 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 378 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 379 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 418
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02, complete sequence Length = 127642 Score = 157 bits (79), Expect = 5e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 51 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 110 |||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 76457 aggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagccatactcta 76398 Query: 111 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 170 |||| ||||||||||| | ||||||| ||||| |||||||| ||||| |||||||||| Sbjct: 76397 ggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaagcctgaag 76338 Query: 171 tccgtgatgctgccagagaagccgctcttcg 201 | ||||||||||| |||||||| |||||||| Sbjct: 76337 ttcgtgatgctgctagagaagctgctcttcg 76307 Score = 125 bits (63), Expect = 2e-25 Identities = 131/153 (85%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 75933 gtgagatcaaggaacgcatcaagaagaccaaggatgaaaagaaggcgaagaaggctgagg 75874 Query: 261 tgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagggcc 320 | ||||||||||||||||| ||| | |||||||||| | || |||||||||||||| Sbjct: 75873 taaccaagtcccagaagtcgcagtcg---aagggtgccgccccgaggggttccaagggcc 75817 Query: 321 caaagcttggcggtggcggcggcaagcgttgaa 353 | ||| |||| ||||| || || ||||| |||| Sbjct: 75816 cgaagattggtggtggtggtggaaagcgctgaa 75784 Score = 48.1 bits (24), Expect = 0.032 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaagg 53 ||||||||| ||||||||| |||||||||||||||| Sbjct: 76974 ctggacagccatgtacagg-aagcagcacaagaagg 76940
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 5e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 51 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 110 |||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 23795636 aggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagccatactcta 23795577 Query: 111 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 170 |||| ||||||||||| | ||||||| ||||| |||||||| ||||| |||||||||| Sbjct: 23795576 ggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaagcctgaag 23795517 Query: 171 tccgtgatgctgccagagaagccgctcttcg 201 | ||||||||||| |||||||| |||||||| Sbjct: 23795516 ttcgtgatgctgctagagaagctgctcttcg 23795486 Score = 125 bits (63), Expect = 2e-25 Identities = 131/153 (85%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 23795112 gtgagatcaaggaacgcatcaagaagaccaaggatgaaaagaaggcgaagaaggctgagg 23795053 Query: 261 tgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagggcc 320 | ||||||||||||||||| ||| | |||||||||| | || |||||||||||||| Sbjct: 23795052 taaccaagtcccagaagtcgcagtcg---aagggtgccgccccgaggggttccaagggcc 23794996 Query: 321 caaagcttggcggtggcggcggcaagcgttgaa 353 | ||| |||| ||||| || || ||||| |||| Sbjct: 23794995 cgaagattggtggtggtggtggaaagcgctgaa 23794963 Score = 48.1 bits (24), Expect = 0.032 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaagg 53 ||||||||| ||||||||| |||||||||||||||| Sbjct: 23796153 ctggacagccatgtacagg-aagcagcacaagaagg 23796119
>ref|NM_129217.2| Arabidopsis thaliana structural constituent of ribosome AT2G36620 mRNA, complete cds Length = 682 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 278 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 337 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 338 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 397 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 398 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 437 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggac 55 |||||||||||| || |||||| | |||||||||||||||||| Sbjct: 196 gctttgctggactgctatgtaccg-aaagcagcacaagaaggac 238
>gb|AY114728.1| Arabidopsis thaliana 60S ribosomal protein L24 (At2g36620) mRNA, complete cds Length = 529 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 232 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 291 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 292 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 351 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 352 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 391 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggac 55 |||||||||||| || |||||| | |||||||||||||||||| Sbjct: 150 gctttgctggactgctatgtaccg-aaagcagcacaagaaggac 192
>gb|AY072350.1| Arabidopsis thaliana 60S ribosomal protein L24 (At2g36620) mRNA, complete cds Length = 674 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 272 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 331 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 332 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 391 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 392 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 431 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggac 55 |||||||||||| || |||||| | |||||||||||||||||| Sbjct: 190 gctttgctggactgctatgtaccg-aaagcagcacaagaaggac 232
>gb|AY058086.1| Arabidopsis thaliana At2g36620/F1O11.25 mRNA, complete cds Length = 675 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 270 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 329 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 330 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 389 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 390 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 429 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggac 55 |||||||||||| || |||||| | |||||||||||||||||| Sbjct: 188 gctttgctggactgctatgtaccg-aaagcagcacaagaaggac 230
>gb|AY085323.1| Arabidopsis thaliana clone 14564 mRNA, complete sequence Length = 677 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 278 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 337 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 338 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 397 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 398 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 437 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggac 55 |||||||||||| || |||||| | |||||||||||||||||| Sbjct: 196 gctttgctggactgctatgtaccg-aaagcagcacaagaaggac 238
>emb|AJ293729.1|ATH293729 Arabidopsis thaliana partial mRNA for 60S ribosomal protein L24 (RL24 gene) Length = 1310 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 259 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 318 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 214 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 319 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 378 Query: 215 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 379 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 418 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 12 gctttgctggacagcaatgtacaggnaagcagcacaagaaggac 55 |||||||||||| || |||||| | |||||||||||||||||| Sbjct: 177 gctttgctggactgctatgtaccg-aaagcagcacaagaaggac 219
>gb|BT013177.1| Lycopersicon esculentum clone 134253R, mRNA sequence Length = 781 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 68 gctgccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgcc 127 ||||| ||||||||||| || |||||||||||||| ||||| |||| ||||| ||||| Sbjct: 237 gctgctaagaagaggcgacgtaccaccaagaagccttactctaggtctattgtgggtgca 296 Query: 128 acactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccaga 187 || |||| || |||||||||||||| |||| | ||| ||||| || ||||||||||| Sbjct: 297 accttggaggtaatccagaagaagagaactgaaaggccagaagttcgagatgctgccagg 356 Query: 188 gaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggcc 247 || || ||||||||||| || ||||| | ||||||||||| |||||||| |||||||| Sbjct: 357 gaggctgctcttcgtgaaattaaggaaaggatcaagaagacaaaggatgaaaagaaggct 416 Query: 248 aagaaggcagaggt 261 ||||| |||||||| Sbjct: 417 aagaaagcagaggt 430
>gb|AY310816.1| Nicotiana benthamiana clone 12-370 unknown mRNA Length = 476 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 74 aagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactg 133 ||||||||||| || | || |||||||| ||||| |||| ||||| ||||| || ||| Sbjct: 52 aagaagaggcgacgtgcaacaaagaagccttactccaggtccattgtgggtgcaaccctg 111 Query: 134 gaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagcc 193 || ||||||||||||||||| |||| | ||| ||||| | |||||||| || || || Sbjct: 112 gaggttatccagaagaagagaactgaaaggccagaagttagagatgctgctagggaggct 171 Query: 194 gctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaag 253 ||||| ||||| |||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 172 gctctccgtgaaatcaaggaaaggatcaagaagacaaaggatgagaagaaggccaagaag 231 Query: 254 gcagaggtg 262 ||||||||| Sbjct: 232 gcagaggtg 240
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 73 caagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacact 132 ||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 6898176 caagaagaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctaccct 6898235 Query: 133 ggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagc 192 ||||| |||||||||||||| ||||||||||| || || |||||||| || || ||| | Sbjct: 6898236 tgaagtcatccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatc 6898295 Query: 193 cgctcttcg 201 ||||||||| Sbjct: 6898296 cgctcttcg 6898304 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 |||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 6898636 gtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcagagg 6898695 Query: 261 tg 262 || Sbjct: 6898696 tg 6898697 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/35 (91%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 19 tggacagcaatgtacaggnaagcagcacaagaagg 53 |||||||| |||||||| |||||||||||||||| Sbjct: 6897844 tggacagccatgtacag-aaagcagcacaagaagg 6897877
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 73 caagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacact 132 ||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 21991 caagaagaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctaccct 22050 Query: 133 ggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagc 192 ||||| |||||||||||||| ||||||||||| || || |||||||| || || ||| | Sbjct: 22051 tgaagtcatccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatc 22110 Query: 193 cgctcttcg 201 ||||||||| Sbjct: 22111 cgctcttcg 22119 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 |||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 22451 gtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcagagg 22510 Query: 261 tg 262 || Sbjct: 22511 tg 22512 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/35 (91%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 19 tggacagcaatgtacaggnaagcagcacaagaagg 53 |||||||| |||||||| |||||||||||||||| Sbjct: 21659 tggacagccatgtacag-aaagcagcacaagaagg 21692
>emb|AJ225027.1|CAR225027 Cicer arietinum mRNA for ribosomal protein L24 Length = 697 Score = 129 bits (65), Expect = 1e-26 Identities = 155/185 (83%) Strand = Plus / Plus Query: 74 aagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactg 133 ||||||||||| || | ||||| ||||| ||||| |||| ||||||||||| || || Sbjct: 237 aagaagaggcgtcgtgctaccaaaaagccatactctaggtccattgttggtgctactttg 296 Query: 134 gaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagcc 193 ||||| || |||||||| || |||||||||||||||| |||||||| || || ||||| Sbjct: 297 gaagtcattcagaagaaaagaactgagaagcctgaagttcgtgatgccgctagggaagct 356 Query: 194 gctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaag 253 ||||||||||| || |||||| | |||||||| || |||||||||||||| |||||||| Sbjct: 357 gctcttcgtgaaattaaggagagaatcaagaaaactaaggatgagaagaaagccaagaaa 416 Query: 254 gcaga 258 ||||| Sbjct: 417 gcaga 421
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 73 caagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacact 132 ||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 54431 caagaagaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctaccct 54490 Query: 133 ggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagc 192 ||||| |||||||||||||| ||||||||||| || || |||||||| || || ||| | Sbjct: 54491 tgaagtcatccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatc 54550 Query: 193 cgctcttcg 201 ||||||||| Sbjct: 54551 cgctcttcg 54559 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 260 |||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 54891 gtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcagagg 54950 Query: 261 tg 262 || Sbjct: 54951 tg 54952 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/35 (91%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 19 tggacagcaatgtacaggnaagcagcacaagaagg 53 |||||||| |||||||| |||||||||||||||| Sbjct: 54099 tggacagccatgtacag-aaagcagcacaagaagg 54132
>gb|DQ268857.1| Solanum tuberosum clone 174B08 ribosomal protein L24-like protein mRNA, complete cds Length = 706 Score = 115 bits (58), Expect = 2e-22 Identities = 145/174 (83%) Strand = Plus / Plus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 |||| ||||| || ||||| |||| ||||| ||||| || |||| || |||||||||| Sbjct: 274 ccacaaagaaaccttactctaggtccattgtgggtgcaaccttggaggtaatccagaaga 333 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 209 |||| ||||| | ||| ||||| || ||||||||||| || || ||||||||||| |||| Sbjct: 334 agagagctgaaaggccagaagttcgagatgctgccagggaggctgctcttcgtgaaatca 393 Query: 210 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtga 263 |||| | |||||||| || ||||| || ||||||||||||||||||||||||| Sbjct: 394 aggaaagaatcaagaaaacaaaggacgaaaagaaggccaagaaggcagaggtga 447 Score = 40.1 bits (20), Expect = 7.8 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 19 tggacagcaatgtacaggnaagcagcacaagaagga 54 ||||| || ||||||||| ||||||||||||||||| Sbjct: 204 tggactgccatgtacagg-aagcagcacaagaagga 238
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 113 bits (57), Expect = 6e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 90 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 149 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 84487 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 84428 Query: 150 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctct 198 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 84427 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctct 84379 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 ||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 84283 gtgagatcaaggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 84230
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 89.7 bits (45), Expect = 9e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 65 gaggctgccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggt 124 |||||||| | ||||| ||| ||| | ||||| ||||| ||||| |||| ||||||||| Sbjct: 61475 gaggctgcgaggaagaagcgtcgctctaccaaaaagccttactccaggtcaattgttggt 61534 Query: 125 gccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgcc 184 || ||| |||||||||| ||||| | ||| |||| |||||||| || || |||||||| Sbjct: 61535 gctacattggaagttattcagaaaaggagaactgaaaagcctgaggttcgagatgctgct 61594 Query: 185 agagaagccgctcttcg 201 ||||||||||||||||| Sbjct: 61595 agagaagccgctcttcg 61611 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 tcaagaagaccaaggatgagaagaaggccaagaaggcaga 258 ||||||| || ||||||||||||| ||| ||||||||||| Sbjct: 61777 tcaagaaaacaaaggatgagaagagggcaaagaaggcaga 61816
>dbj|AP004955.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19K21, TM0132, complete sequence Length = 59303 Score = 89.7 bits (45), Expect = 9e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 65 gaggctgccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggt 124 |||||||| | ||||| ||| ||| | ||||| ||||| ||||| |||| ||||||||| Sbjct: 40955 gaggctgcgaggaagaagcgtcgctctaccaaaaagccttactccaggtcaattgttggt 41014 Query: 125 gccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgcc 184 || ||| |||||||||| ||||| | ||| |||| |||||||| || || |||||||| Sbjct: 41015 gctacattggaagttattcagaaaaggagaactgaaaagcctgaggttcgagatgctgct 41074 Query: 185 agagaagccgctcttcg 201 ||||||||||||||||| Sbjct: 41075 agagaagccgctcttcg 41091 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 tcaagaagaccaaggatgagaagaaggccaagaaggcaga 258 ||||||| || ||||||||||||| ||| ||||||||||| Sbjct: 41257 tcaagaaaacaaaggatgagaagagggcaaagaaggcaga 41296
>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete sequence Length = 104364 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 99953 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 99894 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagc 192 || |||||||||||||| |||||||| || |||||||| Sbjct: 99893 gcagagaagcctgaagttcgtgatgccgctagagaagc 99856 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 99753 gtgagatcaaggagagaatcaagaagaccaaggacgagaagaaggcaaagaagg 99700
>gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K3 map g6825, complete sequence Length = 92376 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 95 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 154 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 2277 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 2218 Query: 155 gctgagaagcctgaagtccgtgatgctgccagagaagc 192 || |||||||||||||| |||||||| || |||||||| Sbjct: 2217 gcagagaagcctgaagttcgtgatgccgctagagaagc 2180 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 201 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 254 |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 2077 gtgagatcaaggagagaatcaagaagaccaaggacgagaagaaggcaaagaagg 2024
>emb|AJ617049.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np221 Length = 322 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 176 gatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggat 235 |||||||| || || || ||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 322 gatgctgctagggaggctgctctccgtgaaatcaaggaaagaatcaagaagacaaaggat 263 Query: 236 gagaagaaggccaagaaggcagaggtga 263 || |||||||| ||||| |||||||||| Sbjct: 262 gaaaagaaggctaagaaagcagaggtga 235 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 314 aagggcccaaagcttggcggtggcggcgg 342 |||||||| ||||||||||| |||||||| Sbjct: 178 aagggccctaagcttggcggcggcggcgg 150
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 92 accaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaag 151 ||||| ||||| |||||| |||| ||||||||||| || |||||||||| || |||||| Sbjct: 106479 accaaaaagccttactcaaggtccattgttggtgctactttggaagttattcaaaagaag 106420 Query: 152 agggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcg 201 || | || ||||| || || || ||||||||||||||||| || ||||| Sbjct: 106419 agatcagaaaagccagaggttcgggatgctgccagagaagctgcccttcg 106370 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 221 aagaagaccaaggatgagaagaaggccaagaaggcaga 258 ||||| || ||||||||||||||||| ||||||||||| Sbjct: 106191 aagaaaacaaaggatgagaagaaggcgaagaaggcaga 106154
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 92 accaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaag 151 ||||| ||||| |||||| |||| ||||||||||| || |||||||||| || |||||| Sbjct: 13266 accaaaaagccttactcaaggtccattgttggtgctactttggaagttattcaaaagaag 13325 Query: 152 agggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcg 201 || | || ||||| || || || ||||||||||||||||| || ||||| Sbjct: 13326 agatcagaaaagccagaggttcgggatgctgccagagaagctgcccttcg 13375 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 221 aagaagaccaaggatgagaagaaggccaagaaggcaga 258 ||||| || ||||||||||||||||| ||||||||||| Sbjct: 13554 aagaaaacaaaggatgagaagaaggcgaagaaggcaga 13591
>dbj|AK221088.1| Arabidopsis thaliana mRNA for 60S ribosomal protein - like, partial cds, clone: RAFL22-82-K11 Length = 343 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 188 gaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggcc 247 ||||| ||||| |||||||||||||| | ||||| |||||||| ||||| |||||||| Sbjct: 2 gaagctgctctgcgtgagatcaaggaaagaatcaaaaagaccaaagatgaaaagaaggct 61 Query: 248 aagaagg 254 ||||||| Sbjct: 62 aagaagg 68
>gb|AY310767.1| Nicotiana benthamiana clone 7-269 unknown mRNA Length = 375 Score = 58.0 bits (29), Expect = 3e-05 Identities = 114/141 (80%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 74 aagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactg 133 ||||||||||| || | || |||||||| ||||| |||| ||||| ||||| || ||| Sbjct: 218 aagaagaggcgacgtgcaacaaagaagccttactccaggtccattgtgggtgcaaccctg 277 Query: 134 gaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagcc 193 || ||||||||||||||||| |||| | ||| ||||| | |||||||| || || || Sbjct: 278 gaggttatccagaagaagagaactgaaaggccagaagttagagatgctgctagggaggct 337 Query: 194 gctctt-cgtgagatcaagga 213 |||||| ||||| |||||||| Sbjct: 338 gctcttccgtgaaatcaagga 358
>dbj|AK106230.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B01, full insert sequence Length = 2034 Score = 54.0 bits (27), Expect = 5e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 18 ctggacagcaatgtacaggnaagcagcacaagaaggacatcca 60 ||||||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 252 ctggacagccatgtacagg-aagcagcacaagaaggatatcca 293
>gb|AC090805.7| Homo sapiens chromosome 8, clone RP11-55A15, complete sequence Length = 97951 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 gagaagaaggccaagaaggcagag 259 |||||||||||||||||||||||| Sbjct: 83598 gagaagaaggccaagaaggcagag 83575
>gb|DQ401085.1| Chlamydomonas sp. ICE-L 60S ribosomal protein mRNA, complete cds Length = 634 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 143 cagaagaagagggctgagaagcctgaagtccg 174 |||| ||||||||||||||||||||| ||||| Sbjct: 310 cagaggaagagggctgagaagcctgaggtccg 341
>ref|XM_504493.1| Yarrowia lipolytica CLIB122, YALI0E28153g predicted mRNA Length = 5574 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 catcaagaagaccaaggatgagaagaaggccaaga 251 |||||| ||||| |||| ||||||||||||||||| Sbjct: 4533 catcaaaaagactaaggctgagaagaaggccaaga 4567
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 catcaagaagaccaaggatgagaagaaggccaaga 251 |||||| ||||| |||| ||||||||||||||||| Sbjct: 3325540 catcaaaaagactaaggctgagaagaaggccaaga 3325574 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 3019373 gagaagaaggccaagaaggc 3019354
>ref|NM_014303.2| Homo sapiens pescadillo homolog 1, containing BRCT domain (zebrafish) (PES1), mRNA Length = 2279 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1808 tgagaagaaggccaagaaggca 1829
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 caagaagaccaaggatgagaag 241 |||||||||||||||||||||| Sbjct: 658998 caagaagaccaaggatgagaag 659019
>ref|XM_811165.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510565.50) partial mRNA Length = 1818 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 gagatcaaggagcgcatcaagaagaccaag 232 ||||||||| ||||||||||||||| |||| Sbjct: 150 gagatcaagaagcgcatcaagaagatcaag 179
>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence Length = 104866 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Minus Query: 159 agaagcctgaagtccgtgatgctgccagagaagccgctcttcgtga 204 |||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 48038 agaagcctgaggttcgagatgctgctagggaagctgctcttcgtga 47993
>gb|BC018848.1| Homo sapiens cDNA clone IMAGE:3141182, **** WARNING: chimeric clone **** Length = 3082 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 641 tgagaagaaggccaagaaggca 662
>emb|AL360089.13| Human DNA sequence from clone RP11-284P20 on chromosome 9 Contains the 3' end of a novel gene, a pescadillo homolog 1, containing BRCT domain (zebrafish) (PES1) pseudogene, a novel gene and a ribosomal protein L3 (RPL3) pseudogene, complete sequence Length = 129263 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 53579 tgagaagaaggccaagaaggca 53600
>dbj|AK125778.1| Homo sapiens cDNA FLJ43790 fis, clone TESTI2053399, moderately similar to Homo sapiens pescadillo 1, containing BRCT domain (zebrafish) (PES1) Length = 1732 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1289 tgagaagaaggccaagaaggca 1310
>dbj|AK127185.1| Homo sapiens cDNA FLJ45250 fis, clone BRHIP2008756, moderately similar to Homo sapiens pescadillo 1, containing BRCT domain (zebrafish) (PES1) Length = 2691 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 2240 tgagaagaaggccaagaaggca 2261
>emb|CR620678.1| full-length cDNA clone CS0DA004YI10 of Neuroblastoma of Homo sapiens (human) Length = 2144 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1730 tgagaagaaggccaagaaggca 1751
>emb|CR620248.1| full-length cDNA clone CS0DG005YL14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 2206 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1756 tgagaagaaggccaagaaggca 1777
>emb|CR611212.1| full-length cDNA clone CS0DE011YP13 of Placenta of Homo sapiens (human) Length = 2170 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1772 tgagaagaaggccaagaaggca 1793
>emb|CR608268.1| full-length cDNA clone CS0DI042YA02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2207 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1781 tgagaagaaggccaagaaggca 1802
>emb|CR608043.1| full-length cDNA clone CS0DF016YB22 of Fetal brain of Homo sapiens (human) Length = 2196 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1781 tgagaagaaggccaagaaggca 1802
>emb|CR607661.1| full-length cDNA clone CS0DA001YJ13 of Neuroblastoma of Homo sapiens (human) Length = 2239 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1788 tgagaagaaggccaagaaggca 1809
>emb|CR607111.1| full-length cDNA clone CS0DA005YI24 of Neuroblastoma of Homo sapiens (human) Length = 2194 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1782 tgagaagaaggccaagaaggca 1803
>dbj|AK096320.1| Homo sapiens cDNA FLJ39001 fis, clone NT2RI2022584, highly similar to Homo sapiens pescadillo mRNA Length = 2705 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 2258 tgagaagaaggccaagaaggca 2279
>emb|CR598932.1| full-length cDNA clone CS0DI057YB08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2170 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1747 tgagaagaaggccaagaaggca 1768
>emb|CR597817.1| full-length cDNA clone CS0DI016YA07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1746 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1296 tgagaagaaggccaagaaggca 1317
>emb|CR597567.1| full-length cDNA clone CS0DA008YM01 of Neuroblastoma of Homo sapiens (human) Length = 2176 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1744 tgagaagaaggccaagaaggca 1765
>emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in linkage group 11, complete sequence Length = 248929 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ctgccaagaagaggcgccgcac 90 |||||||||||||||||||||| Sbjct: 208927 ctgccaagaagaggcgccgcac 208906
>dbj|AB029901.2| Homo sapiens CST gene for cerebroside sulfotransferase, complete cds Length = 25926 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 3266 tgagaagaaggccaagaaggca 3287
>gb|AC005006.2|AC005006 Homo sapiens clone RP1-56J10, complete sequence Length = 101720 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 26361 tgagaagaaggccaagaaggca 26340
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 gagatcaaggagcgcatcaagaagaccaag 232 |||||| ||| ||||||||||||||||||| Sbjct: 6961856 gagatcgaggcgcgcatcaagaagaccaag 6961885
>gb|AY893015.1| Synthetic construct Homo sapiens clone FLH119699.01L pescadillo-like 1 containing BRCT domain (PES1) mRNA, partial cds Length = 1767 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1734 tgagaagaaggccaagaaggca 1755
>gb|AY890547.1| Synthetic construct Homo sapiens clone FLH119703.01X pescadillo-like 1 containing BRCT domain (PES1) mRNA, complete cds Length = 1767 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1734 tgagaagaaggccaagaaggca 1755
>gb|BC032489.1| Homo sapiens pescadillo homolog 1, containing BRCT domain (zebrafish), mRNA (cDNA clone MGC:40305 IMAGE:5416478), complete cds Length = 2285 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1798 tgagaagaaggccaagaaggca 1819
>emb|CR456539.1| Homo sapiens PES1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.PES1) Length = 1988 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1744 tgagaagaaggccaagaaggca 1765
>emb|AJ495850.1|PLI495850 Paracentrotus lividus partial dnmt1 gene for DNA methyltransferase, exon 17 Length = 581 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 caaggatgagaagaaggccaagaagg 254 |||||||||||||||||| ||||||| Sbjct: 512 caaggatgagaagaaggctaagaagg 537
>gb|U78310.1|HSU78310 Homo sapiens pescadillo mRNA, complete cds Length = 2257 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tgagaagaaggccaagaaggca 256 |||||||||||||||||||||| Sbjct: 1792 tgagaagaaggccaagaaggca 1813
>emb|Z50183.1|PLDNACMT P.lividus mRNA for DNA (cytosine-5-)-methyltransferase Length = 7170 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 caaggatgagaagaaggccaagaagg 254 |||||||||||||||||| ||||||| Sbjct: 2188 caaggatgagaagaaggctaagaagg 2213
>ref|NM_053379.2| Rattus norvegicus doublecortin (Dcx), mRNA Length = 8814 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 143 atgagaagaaggccaagaagg 163
>gb|AY560329.1| Mus musculus doublecortin (Dcx) mRNA, complete cds Length = 2920 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 203 atgagaagaaggccaagaagg 223
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 cctagccttgtttcttatcct 407 ||||||||||||||||||||| Sbjct: 42499 cctagccttgtttcttatcct 42519
>ref|NM_023868.1| Mus musculus ryanodine receptor 2, cardiac (Ryr2), mRNA Length = 14904 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 aggatgagaagaaggccaaga 251 ||||||||||||||||||||| Sbjct: 12859 aggatgagaagaaggccaaga 12839
>gb|BC056391.1| Mus musculus doublecortin, mRNA (cDNA clone MGC:73924 IMAGE:6855006), complete cds Length = 4011 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 208 atgagaagaaggccaagaagg 228
>gb|BC057010.1| Mus musculus doublecortin, mRNA (cDNA clone MGC:67049 IMAGE:6825750), complete cds Length = 4102 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 300 atgagaagaaggccaagaagg 320
>gb|BC062974.1| Mus musculus doublecortin, mRNA (cDNA clone MGC:61189 IMAGE:6825750), complete cds Length = 4102 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 300 atgagaagaaggccaagaagg 320
>emb|CR701428.2|CNS0G468 Tetraodon nigroviridis full-length cDNA Length = 528 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gaatttgcaccttttctgtga 470 ||||||||||||||||||||| Sbjct: 251 gaatttgcaccttttctgtga 231
>emb|CR685071.2|CNS0FRJV Tetraodon nigroviridis full-length cDNA Length = 1377 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gaatttgcaccttttctgtga 470 ||||||||||||||||||||| Sbjct: 1049 gaatttgcaccttttctgtga 1029
>emb|AL009172.1|HS212G6 Human DNA sequence from clone RP1-212G6 on chromosome Xp11.3-11.4 Contains the 5'end of the SYN1 gene for synapsin I, the PFC gene for properdin P factor (complement), the ELK1 member of the ETS oncogene family, the UTX gene for ubiquitously-expressed transcript, an SMS (spermine synthase) pseudogene, a novel gene (LOC286403) and three CpG islands, complete sequence Length = 156601 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 cctagccttgtttcttatcct 407 ||||||||||||||||||||| Sbjct: 95849 cctagccttgtttcttatcct 95869
>emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l22, COMPLETE SEQUENCE Length = 115705 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gatgctgccagagaagccgctcttcgtga 204 ||||||||||||||||| | ||||||||| Sbjct: 61812 gatgctgccagagaagctgatcttcgtga 61840
>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence Length = 195714 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aggatgagaagaaggccaaga 251 ||||||||||||||||||||| Sbjct: 71884 aggatgagaagaaggccaaga 71904
>emb|X83933.1|MMRNARYR2 M.musculus mRNA for ryanodine receptor type 2 Length = 3859 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 aggatgagaagaaggccaaga 251 ||||||||||||||||||||| Sbjct: 425 aggatgagaagaaggccaaga 405
>ref|NM_010025.2| Mus musculus doublecortin (Dcx), mRNA Length = 8982 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 315 atgagaagaaggccaagaagg 335
>gb|AC008830.7| Homo sapiens chromosome 5 clone CTD-2142G21, complete sequence Length = 140696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 gatgagtttatttacaatgaa 523 ||||||||||||||||||||| Sbjct: 90215 gatgagtttatttacaatgaa 90235
>dbj|AK164119.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530035O19 product:doublecortin, full insert sequence Length = 3985 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 202 atgagaagaaggccaagaagg 222
>dbj|AK049050.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230095H06 product:doublecortin, full insert sequence Length = 3195 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 389 atgagaagaaggccaagaagg 409
>dbj|AK048410.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130058C09 product:doublecortin, full insert sequence Length = 2619 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 321 atgagaagaaggccaagaagg 341
>dbj|AK014264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110080G17 product:doublecortin, full insert sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 316 atgagaagaaggccaagaagg 336
>gb|AF155959.2| Rattus norvegicus neuronal migration protein doublecortin mRNA, complete cds Length = 8814 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 143 atgagaagaaggccaagaagg 163
>gb|AF295105.1|AF295105 Mus musculus cardiac Ca2+ release channel mRNA, complete cds Length = 14904 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 aggatgagaagaaggccaaga 251 ||||||||||||||||||||| Sbjct: 12859 aggatgagaagaaggccaaga 12839
>ref|XM_576940.1| PREDICTED: Rattus norvegicus similar to doublecortin isoform a (LOC501537), mRNA Length = 2315 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 335 atgagaagaaggccaagaagg 355
>emb|BX530055.9| Mouse DNA sequence from clone RP23-462G16 on chromosome X, complete sequence Length = 168373 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 138417 atgagaagaaggccaagaagg 138397
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 atgagtttatttacaatgaat 524 ||||||||||||||||||||| Sbjct: 32972 atgagtttatttacaatgaat 32952 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcggcggcaagcgttgaaag 355 |||||||||||||||||||| Sbjct: 3814158 gcggcggcaagcgttgaaag 3814177
>gb|AF045547.1|AF045547 Mus musculus doublecortin (Dcx) mRNA, complete cds Length = 1199 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 196 atgagaagaaggccaagaagg 216
>dbj|AB011678.1| Mus musculus mRNA for doublecortin, complete cds Length = 9113 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atgagaagaaggccaagaagg 254 ||||||||||||||||||||| Sbjct: 411 atgagaagaaggccaagaagg 431
>ref|NM_111769.1| Arabidopsis thaliana unknown protein AT3G09350 mRNA, complete cds Length = 1466 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 897 cagagaagccgctcttcgtg 916
>ref|XM_525640.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ30473 (LOC470257), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 agaagaccaaggatgagaag 241 |||||||||||||||||||| Sbjct: 428 agaagaccaaggatgagaag 447
>ref|XM_518333.1| PREDICTED: Pan troglodytes similar to TNFalpha-inducible ATP-binding protein (LOC462543), mRNA Length = 2398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 537 agaaggccaagaaggcagag 556
>ref|XM_517476.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 6330415M09 (LOC461534), mRNA Length = 1972 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 236 gagaagaaggccaagaaggc 255
>gb|AY803092.1| Sus scrofa chromosome 17 clone pkmCon19, mRNA sequence Length = 379 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ttcggcacgaggctttgctg 20 |||||||||||||||||||| Sbjct: 34 ttcggcacgaggctttgctg 53
>gb|AY601882.1| Chlamydomonas reinhardtii central pair complex 1 (CPC1) mRNA, complete cds Length = 6261 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 agcttggcggtggcggcggc 343 |||||||||||||||||||| Sbjct: 1156 agcttggcggtggcggcggc 1137
>gb|AY601881.1| Chlamydomonas reinhardtii central pair complex 1 (CPC1) gene, complete cds Length = 9716 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 agcttggcggtggcggcggc 343 |||||||||||||||||||| Sbjct: 2239 agcttggcggtggcggcggc 2220
>gb|AC100737.18| Mus musculus chromosome 7, clone RP24-360I22, complete sequence Length = 148090 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gaagaccaaggatgagaaga 242 |||||||||||||||||||| Sbjct: 40503 gaagaccaaggatgagaaga 40522
>ref|XM_616231.2| PREDICTED: Bos taurus similar to doublecortin kinase 2 (LOC536110), mRNA Length = 3347 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 213 gagaagaaggccaagaaggc 232
>ref|XM_869267.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 1 isoform b (LOC617082), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 708 agaaggccaagaaggcagag 727
>ref|XM_603695.2| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 1 isoform b (LOC525343), mRNA Length = 1705 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 398 agaaggccaagaaggcagag 417
>ref|XM_870850.1| PREDICTED: Bos taurus similar to Voltage-dependent calcium channel gamma-8 subunit (Neuronal voltage-gated calcium channel gamma-8 subunit) (LOC618518), mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ggcggtggcggcggcaagcg 348 |||||||||||||||||||| Sbjct: 16 ggcggtggcggcggcaagcg 35
>gb|AC115045.13| Mus musculus chromosome 6, clone RP24-315D19, complete sequence Length = 177917 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 aatttgcaccttttctgtga 470 |||||||||||||||||||| Sbjct: 102851 aatttgcaccttttctgtga 102870
>ref|NM_001040261.1| Homo sapiens doublecortin and CaM kinase-like 2 (DCAMKL2), transcript variant 2, mRNA Length = 3600 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 302 gagaagaaggccaagaaggc 321
>ref|NM_001040260.1| Homo sapiens doublecortin and CaM kinase-like 2 (DCAMKL2), transcript variant 1, mRNA Length = 3603 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 302 gagaagaaggccaagaaggc 321
>ref|XM_951811.1| Neurospora crassa OR74A hypothetical protein (NCU01698.1) partial mRNA Length = 189 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tgctgaggctgccaagaaga 80 |||||||||||||||||||| Sbjct: 165 tgctgaggctgccaagaaga 184
>ref|XM_328136.1| Neurospora crassa OR74A hypothetical protein (NCU01698.1) partial mRNA Length = 189 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tgctgaggctgccaagaaga 80 |||||||||||||||||||| Sbjct: 165 tgctgaggctgccaagaaga 184
>ref|NM_027539.3| Mus musculus doublecortin and CaM kinase-like 2 (Dcamkl2), mRNA Length = 4032 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 884 gagaagaaggccaagaaggc 903
>gb|L25599.1| Caenorhabditis elegans cosmid F54H12, complete sequence Length = 19168 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 14842 gagaagaaggccaagaaggc 14823
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ggctgagaagcctgaagtccgtga 177 |||||||||||||||||| ||||| Sbjct: 495676 ggctgagaagcctgaagtgcgtga 495653
>ref|NM_001025091.1| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 1, mRNA Length = 3474 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 751 agaaggccaagaaggcagag 770
>ref|NM_001090.2| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 2, mRNA Length = 3360 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 751 agaaggccaagaaggcagag 770
>gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome 8, complete sequence Length = 224213 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttgccctcttgaatttgca 458 |||||||||||||||||||| Sbjct: 25344 cttgccctcttgaatttgca 25363
>gb|AC136018.5| Mus musculus BAC clone RP24-125E6 from chromosome 7, complete sequence Length = 210491 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 aatttgcaccttttctgtga 470 |||||||||||||||||||| Sbjct: 83323 aatttgcaccttttctgtga 83342
>gb|DQ016670.1| Uncultured Actinomyces sp. clone 8.3.3 16S ribosomal RNA gene, partial sequence Length = 505 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gttatccagaagaagagggc 156 |||||||||||||||||||| Sbjct: 128 gttatccagaagaagagggc 109
>gb|DQ016669.1| Uncultured Actinomyces sp. clone 8.2.3 16S ribosomal RNA gene, partial sequence Length = 505 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gttatccagaagaagagggc 156 |||||||||||||||||||| Sbjct: 128 gttatccagaagaagagggc 109
>emb|BX950198.13| Zebrafish DNA sequence from clone CH211-214G3 in linkage group 24, complete sequence Length = 196308 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 78333 gccaagaagaggcgccgcac 78314
>ref|XM_539760.2| PREDICTED: Canis familiaris similar to doublecortin kinase 2 (LOC482642), mRNA Length = 2589 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosome 8, complete sequence Length = 130946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttgccctcttgaatttgca 458 |||||||||||||||||||| Sbjct: 90457 cttgccctcttgaatttgca 90476
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence Length = 181261 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 55228 gagaagaaggccaagaaggc 55209
>ref|XM_532056.2| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 1 (ATP-binding cassette 50) (TNF-alpha stimulated ABC protein) (LOC474826), mRNA Length = 2917 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 645 agaaggccaagaaggcagag 664
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 69326 cagagaagccgctcttcgtg 69345
>emb|BX927125.18| Zebrafish DNA sequence from clone CH211-122L24 in linkage group 2, complete sequence Length = 165489 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 68943 gccaagaagaggcgccgcac 68962
>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence Length = 155637 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttgccctcttgaatttgca 458 |||||||||||||||||||| Sbjct: 46374 cttgccctcttgaatttgca 46393
>gb|AC109166.10| Mus musculus chromosome 7, clone RP23-310P1, complete sequence Length = 168878 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 aatttgcaccttttctgtga 470 |||||||||||||||||||| Sbjct: 153273 aatttgcaccttttctgtga 153292
>emb|CR376723.15| Zebrafish DNA sequence from clone DKEY-90N12 in linkage group 8, complete sequence Length = 213541 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 49929 gccaagaagaggcgccgcac 49910
>emb|BX119957.13| Human DNA sequence from clone DASS-182C6 on chromosome 6, complete sequence Length = 112118 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 9112 agaaggccaagaaggcagag 9131
>emb|BX000357.7| Human DNA sequence from clone DAQB-256B5 on chromosome 6 Contains the GNL1 gene for guanine nucleotide binding protein-like 1, the PRR3 gene for proline-rich polypeptide 3, the ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1 and 2 CpG islands, complete sequence Length = 64172 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 46019 agaaggccaagaaggcagag 46038
>emb|AL662825.5| Human DNA sequence from clone XXbac-98J21 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the 5' end of the MRPS18B gene for mitochondrial ribosomal protein S18B and three CpG islands, complete sequence Length = 81768 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 37847 agaaggccaagaaggcagag 37866
>emb|AL662800.4| Human DNA sequence from clone XXbac-249D20 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the MRPS18B gene for mitochondrial ribosomal protein S18B, two novel proteins, a prothymosin alpha (PTMA) pseudogene and four CpG islands, complete sequence Length = 151228 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 80672 agaaggccaagaaggcagag 80691
>ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predicted mRNA Length = 4068 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 1327 gagaagaaggccaagaaggc 1346
>ref|XM_781978.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA topoisomerase II, alpha isozyme (LOC582001), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gaagaaggccaagaaggcag 257 |||||||||||||||||||| Sbjct: 2055 gaagaaggccaagaaggcag 2074
>emb|AL929028.29| Zebrafish DNA sequence from clone CH211-13F6 in linkage group 20, complete sequence Length = 182372 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 29714 gccaagaagaggcgccgcac 29733
>gb|AE008871.1| Salmonella typhimurium LT2, section 175 of 220 of the complete genome Length = 20651 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcggcggcaagcgttgaaag 355 |||||||||||||||||||| Sbjct: 936 gcggcggcaagcgttgaaag 955
>gb|BC034488.2| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1, transcript variant 1, mRNA (cDNA clone MGC:26501 IMAGE:4826422), complete cds Length = 3204 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 696 agaaggccaagaaggcagag 715
>emb|AL834498.1|HSM805609 Homo sapiens mRNA; cDNA DKFZp761I032 (from clone DKFZp761I032) Length = 3355 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 3 gagaagaaggccaagaaggc 22
>emb|AL513408.1|NC61D6 Neurospora crassa DNA linkage group II Cosmid clone 61D6 Length = 38848 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tgctgaggctgccaagaaga 80 |||||||||||||||||||| Sbjct: 26692 tgctgaggctgccaagaaga 26673
>emb|BX571945.15| Zebrafish DNA sequence from clone DKEY-267I17 in linkage group 5, complete sequence Length = 192769 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 12264 ctgccaagaagaggcgccgc 12283
>emb|CR753328.11| Human DNA sequence from clone DADB-129D20 on chromosome 6, complete sequence Length = 105135 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 4713 agaaggccaagaaggcagag 4732
>emb|BX537261.7| Zebrafish DNA sequence from clone DKEY-73F6 in linkage group 14, complete sequence Length = 135268 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 120373 gccaagaagaggcgccgcac 120392
>emb|CR759778.8| Human DNA sequence from clone DAMC-83F13 on chromosome 6, complete sequence Length = 88815 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 5223 agaaggccaagaaggcagag 5242
>emb|CR858735.1| Pongo pygmaeus mRNA; cDNA DKFZp459N0651 (from clone DKFZp459N0651) Length = 3373 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 481 gagaagaaggccaagaaggc 500
>gb|BC056921.1| Mus musculus doublecortin and CaM kinase-like 2, mRNA (cDNA clone MGC:66502 IMAGE:6822681), complete cds Length = 4032 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 884 gagaagaaggccaagaaggc 903
>emb|BX571942.11| Zebrafish DNA sequence from clone DKEY-240A24 in linkage group 11, complete sequence Length = 102110 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 53153 ctgccaagaagaggcgccgc 53134
>emb|BX322792.11| Zebrafish DNA sequence from clone CH211-261I17, complete sequence Length = 174226 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 166778 ctgccaagaagaggcgccgc 166759
>emb|BX321916.14| Zebrafish DNA sequence from clone DKEYP-57E9 in linkage group 20 Contains two CpG islands, complete sequence Length = 120807 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 32668 gccaagaagaggcgccgcac 32687
>emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in linkage group 4 Contains four CpG islands, complete sequence Length = 143792 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 58890 gccaagaagaggcgccgcac 58909
>emb|BX247901.12| Zebrafish DNA sequence from clone CH211-206H4 in linkage group 4 Contains four CpG islands, complete sequence Length = 101223 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 57110 gccaagaagaggcgccgcac 57091
>emb|AL627088.7| Zebrafish DNA sequence from clone RP71-1D6 in linkage group 18 Contains a CpG island, complete sequence Length = 151446 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 64222 gccaagaagaggcgccgcac 64241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tgtgctggttcttatcacaa 550 |||||||||||||||||||| Sbjct: 56466 tgtgctggttcttatcacaa 56485
>emb|BX530062.10| Zebrafish DNA sequence from clone DKEY-13M1 in linkage group 11, complete sequence Length = 144678 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 tttatttacaatgaatggta 528 |||||||||||||||||||| Sbjct: 125308 tttatttacaatgaatggta 125327
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 catcaagaagaccaaggatgagaa 240 ||||||||||| |||||||||||| Sbjct: 5841427 catcaagaagaacaaggatgagaa 5841404
>gb|AC009879.8| Homo sapiens, clone RP11-346I3, complete sequence Length = 191352 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aagttatccagaagaagagg 154 |||||||||||||||||||| Sbjct: 87974 aagttatccagaagaagagg 87955
>emb|AL832430.1|HSM803738 Homo sapiens mRNA; cDNA DKFZp762E013 (from clone DKFZp762E013) Length = 2690 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 181 agaaggccaagaaggcagag 200
>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence Length = 169997 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ggcggtggcggcggcaagcg 348 |||||||||||||||||||| Sbjct: 102850 ggcggtggcggcggcaagcg 102869
>dbj|AB210140.1| Pan troglodytes ABCF1 gene for ATP-binding cassette, sub-family F, member 1, complete cds, cell_line: Ericka Length = 21541 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 9332 agaaggccaagaaggcagag 9351
>dbj|AB210139.1| Pan troglodytes ABCF1 gene for ATP-binding cassette, sub-family F, member 1, complete cds, cell_line: Borie Length = 21541 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 9332 agaaggccaagaaggcagag 9351
>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10, complete sequence Length = 258048 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 209365 ctgccaagaagaggcgccgc 209384
>dbj|AB202093.1| Homo sapiens ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1, complete cds Length = 21845 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 9669 agaaggccaagaaggcagag 9688
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 cttgtttcttatcctatcctacta 416 |||||||||||||| ||||||||| Sbjct: 54998 cttgtttcttatcccatcctacta 55021
>ref|NM_001009691.2| Rattus norvegicus similar to RIKEN cDNA 6330415M09 (predicted) (RGD1308384_predicted), mRNA Length = 3458 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 282 gagaagaaggccaagaaggc 301
>gb|AF322044.1| Malawimonas jakobiformis chaperonin subunit alpha gene, partial cds Length = 1949 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 caaggagcgcatcaagaaga 227 |||||||||||||||||||| Sbjct: 989 caaggagcgcatcaagaaga 1008
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 1211452 gagaagaaggccaagaaggc 1211433
>gb|AC105343.4| Homo sapiens BAC clone RP11-423J7 from 4, complete sequence Length = 155217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 133024 gagaagaaggccaagaaggc 133043
>emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in linkage group 6, complete sequence Length = 216068 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 126466 gccaagaagaggcgccgcac 126485
>gb|DP000043.1| Macaca mulatta target 106 genomic scaffold Length = 373358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcatcaagaagaccaaggat 235 |||||||||||||||||||| Sbjct: 272511 gcatcaagaagaccaaggat 272492
>emb|BX323875.15| Zebrafish DNA sequence from clone CH211-135L21 in linkage group 17, complete sequence Length = 173617 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 157761 ctgccaagaagaggcgccgc 157780
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 43692 ctgccaagaagaggcgccgc 43711
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 gagatcaaggagcgcatcaagaag 226 |||||| ||||||||||||||||| Sbjct: 909006 gagatccaggagcgcatcaagaag 908983
>emb|BX927220.8| Human DNA sequence from clone DAMA-199F12 on chromosome 6, complete sequence Length = 82724 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 68621 agaaggccaagaaggcagag 68640
>emb|BX571832.5| Zebrafish DNA sequence from clone DKEY-256O13 in linkage group 17, complete sequence Length = 109705 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 31 gccaagaagaggcgccgcac 50
>gb|AC002472.8| Homo sapiens Chromosome 22q11.2 PAC Clone p_n5 In BCRL2-GGT Region, complete sequence Length = 147086 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 agaagaccaaggatgagaag 241 |||||||||||||||||||| Sbjct: 11550 agaagaccaaggatgagaag 11569
>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region, complete sequence Length = 235395 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 agaagaccaaggatgagaag 241 |||||||||||||||||||| Sbjct: 203054 agaagaccaaggatgagaag 203073
>dbj|AK049179.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011I05 product:hypothetical Eukaryotic protein kinase/Doublecortin containing protein, full insert sequence Length = 3487 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 368 gagaagaaggccaagaaggc 387
>dbj|AK049126.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330005E20 product:similar to SERINE/THREONINE-PROTEIN KINASE DCAMKL1 (EC 2.7.1.-) (DOUBLECORTIN- LIKE AND CAM KINASE-LIKE 1) [Homo sapiens], full insert sequence Length = 2064 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 406 gagaagaaggccaagaaggc 425
>ref|NM_066336.2| Caenorhabditis elegans F54H12.6 (F54H12.6) mRNA, complete cds Length = 809 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 459 gagaagaaggccaagaaggc 478
>emb|BX323822.7| Zebrafish DNA sequence from clone DKEY-46C2 in linkage group 19, complete sequence Length = 204327 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 177338 ctgccaagaagaggcgccgc 177357 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 72973 gccaagaagaggcgccgcac 72992
>dbj|AK082633.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230072O15 product:hypothetical Eukaryotic protein kinase/Doublecortin containing protein, full insert sequence Length = 2753 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 412 gagaagaaggccaagaaggc 431
>gb|AF361867.1|AF361867 Azospirillum brasilense nif operon, complete sequence Length = 6045 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 caaggagcgcatcaagaaga 227 |||||||||||||||||||| Sbjct: 1611 caaggagcgcatcaagaaga 1630
>emb|BX664706.9| Zebrafish DNA sequence from clone CH211-251F6 in linkage group 20, complete sequence Length = 103574 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 83042 ctgccaagaagaggcgccgc 83023
>emb|BX822576.1|CNS0A5YA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 849 cagagaagccgctcttcgtg 868
>emb|BX822342.1|CNS0A61D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1169 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 809 cagagaagccgctcttcgtg 828
>emb|BX823625.1|CNS0A5BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 873 cagagaagccgctcttcgtg 892
>dbj|AB198721.1| Mus musculus mRNA for doublecortin-like protein kinase, complete cds Length = 2466 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 273 gagaagaaggccaagaaggc 292
>dbj|AB197153.1| Takifugu rubripes RAF1 mRNA for serine/threonine protein kinase RAF1, complete cds Length = 2106 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gcatcaagaagaccaaggatgaga 239 ||||||||||| |||||||||||| Sbjct: 1876 gcatcaagaagtccaaggatgaga 1899
>gb|BT005589.1| Arabidopsis thaliana clone U50189 unknown protein (At3g09350) mRNA, complete cds Length = 1211 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 726 cagagaagccgctcttcgtg 745
>gb|BT004332.1| Arabidopsis thaliana clone RAFL15-45-M16 (R50189) unknown protein (At3g09350) mRNA, complete cds Length = 1318 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 809 cagagaagccgctcttcgtg 828
>ref|XM_222232.3| PREDICTED: Rattus norvegicus similar to hypothetical protein MGC10854 (predicted) (LOC304547), mRNA Length = 2232 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 231 aggatgagaagaaggccaagaaggcaga 258 |||| |||||| |||||||||||||||| Sbjct: 1853 aggaagagaaggaggccaagaaggcaga 1880
>gb|AY085866.1| Arabidopsis thaliana clone 19154 mRNA, complete sequence Length = 1466 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagagaagccgctcttcgtg 203 |||||||||||||||||||| Sbjct: 897 cagagaagccgctcttcgtg 916
>ref|XM_579311.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 6330415M09 (predicted) (RGD1308384_predicted), mRNA Length = 3435 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 282 gagaagaaggccaagaaggc 301
>emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 in linkage group 18, complete sequence Length = 179945 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 39945 gccaagaagaggcgccgcac 39926
>gb|DQ340384.1| Oscheius myriophila heat shock protein 90 (Hsp90) gene, partial cds Length = 875 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 aaggatgagaagaaggccaagaag 253 ||||||||||||||| |||||||| Sbjct: 564 aaggatgagaagaagaccaagaag 587
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 1361692 agaaggccaagaaggcagag 1361673
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 tagacctttctcaagttaccttgc 443 |||||||||||||||| ||||||| Sbjct: 20348 tagacctttctcaagtaaccttgc 20371
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 937316 agaaggccaagaaggcagag 937297
>gb|AY806970.1| Uncultured Actinomyces sp. clone IS023B25 16S ribosomal RNA gene, partial sequence Length = 784 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gttatccagaagaagagggc 156 |||||||||||||||||||| Sbjct: 73 gttatccagaagaagagggc 54
>gb|AY888071.1| Synthetic construct Homo sapiens clone FLH159305.01L hypothetical protein MGC45428 (MGC45428) mRNA, partial cds Length = 2088 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>emb|AJ507295.1|AOR507295 Actinomyces oricola 16S rRNA gene, type strain CCUG 46090T Length = 1508 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gttatccagaagaagagggc 156 |||||||||||||||||||| Sbjct: 127 gttatccagaagaagagggc 108
>emb|AL928790.4| Zebrafish DNA sequence from clone CH211-146N9, complete sequence Length = 171673 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 43682 gccaagaagaggcgccgcac 43663
>dbj|AB113357.1| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 1111D10 Length = 114375 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 17597 agaaggccaagaaggcagag 17616
>emb|X81063.1|ASRRNA16S Actinomyces sp. 16S rRNA gene Length = 1417 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gttatccagaagaagagggc 156 |||||||||||||||||||| Sbjct: 106 gttatccagaagaagagggc 87
>ref|NM_209563.1| Eremothecium gossypii ADR114Cp (ADR114C), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 gagatcaaggagcgcatcaagaag 226 |||||| ||||||||||||||||| Sbjct: 502 gagatccaggagcgcatcaagaag 525
>gb|BC032726.1| Homo sapiens doublecortin and CaM kinase-like 2, mRNA (cDNA clone MGC:45428 IMAGE:5532881), complete cds Length = 3626 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 249 gagaagaaggccaagaaggc 268
>emb|CR631125.9| Zebrafish DNA sequence from clone CH211-188C18, complete sequence Length = 43431 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 41100 gccaagaagaggcgccgcac 41081
>emb|CR392007.7| Zebrafish DNA sequence from clone DKEYP-52F1 in linkage group 18, complete sequence Length = 116358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 43037 gccaagaagaggcgccgcac 43056
>emb|AL929507.37| Zebrafish DNA sequence from clone DKEY-7C18 in linkage group 20, complete sequence Length = 214404 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 202926 ctgccaagaagaggcgccgc 202907
>gb|AY674000.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 4 Length = 2304 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>gb|AY673998.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 2 Length = 3458 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 282 gagaagaaggccaagaaggc 301
>gb|AY673997.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 1 Length = 2317 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>emb|CR790363.24| Zebrafish DNA sequence from clone DKEY-175D9 in linkage group 3, complete sequence Length = 139765 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 33204 gccaagaagaggcgccgcac 33223
>gb|BC060192.1| Mus musculus doublecortin and CaM kinase-like 2, mRNA (cDNA clone IMAGE:6844083) Length = 4939 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 220 gagaagaaggccaagaaggc 239
>dbj|AB086374.1| Sesbania rostrata srha5 mRNA for plasma membrane H+-ATPase, complete cds Length = 3376 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 agaagaagagggctgagaagcctgaagt 171 ||||||||| || ||||||||||||||| Sbjct: 278 agaagaagatgggtgagaagcctgaagt 305
>gb|AC006138.1|AC006138 Homo sapiens clone UWGC:y54c194 from 6p21, complete sequence Length = 37448 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 29772 agaaggccaagaaggcagag 29753
>emb|BX005250.7| Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14, complete sequence Length = 281427 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 259732 gccaagaagaggcgccgcac 259751 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 39542 ctgccaagaagaggcgccgc 39561
>gb|AF027302.1|AF027302 Homo sapiens TNF-alpha stimulated ABC protein (ABC50) mRNA, complete cds Length = 3141 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 750 agaaggccaagaaggcagag 769
>dbj|AB088096.1| Homo sapiens ABC50 gene for ATP-binding cassette, sub-family F (GCN20), member 1, complete cds Length = 21843 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 9666 agaaggccaagaaggcagag 9685
>ref|NM_001037989.1| Takifugu rubripes serine/threonine protein kinase RAF1 (raf1), mRNA Length = 2106 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gcatcaagaagaccaaggatgaga 239 ||||||||||| |||||||||||| Sbjct: 1876 gcatcaagaagtccaaggatgaga 1899
>emb|CR550307.8| Zebrafish DNA sequence from clone DKEY-174E10 in linkage group 11, complete sequence Length = 178645 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccaagaagaggcgccgcac 90 |||||||||||||||||||| Sbjct: 28608 gccaagaagaggcgccgcac 28627
>emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in linkage group 22, complete sequence Length = 243709 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 213240 ctgccaagaagaggcgccgc 213259
>emb|AL844192.12| Zebrafish DNA sequence from clone DKEY-245I2, complete sequence Length = 219054 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctgccaagaagaggcgccgc 88 |||||||||||||||||||| Sbjct: 99230 ctgccaagaagaggcgccgc 99249
>dbj|AB209181.1| Homo sapiens mRNA for Hypothetical protein DKFZp761I032 variant protein Length = 4235 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gagaagaaggccaagaaggc 255 |||||||||||||||||||| Sbjct: 956 gagaagaaggccaagaaggc 975
>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence Length = 232098 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gaagaccaaggatgagaaga 242 |||||||||||||||||||| Sbjct: 26542 gaagaccaaggatgagaaga 26523
>gb|AC165077.3| Mus musculus BAC clone RP24-369J8 from chromosome 7, complete sequence Length = 179228 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gaagaccaaggatgagaaga 242 |||||||||||||||||||| Sbjct: 49480 gaagaccaaggatgagaaga 49499
>dbj|AB023052.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:TS1B10, complete sequence Length = 28719 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 agaaggccaagaaggcagag 259 |||||||||||||||||||| Sbjct: 10920 agaaggccaagaaggcagag 10901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,178,421 Number of Sequences: 3902068 Number of extensions: 5178421 Number of successful extensions: 129175 Number of sequences better than 10.0: 243 Number of HSP's better than 10.0 without gapping: 242 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 128304 Number of HSP's gapped (non-prelim): 857 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
