Clone Name | basd2o05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_189333.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 652 bits (329), Expect = 0.0 Identities = 509/569 (89%) Strand = Plus / Plus Query: 13 ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72 |||||||| ||||| ||||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 517 ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 576 Query: 73 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 577 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 636 Query: 133 gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192 || ||||| || ||||||||||| || ||||| |||||||| ||| | || |||||||| Sbjct: 637 gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 696 Query: 193 ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252 || ||||||||||| || || ||||||||||||||||||||| ||||||| || || ||| Sbjct: 697 ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 756 Query: 253 tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 757 tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 816 Query: 313 atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372 |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 817 atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 876 Query: 373 ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432 || || ||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 877 ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 936 Query: 433 attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492 | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 937 gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 996 Query: 493 cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552 |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || |||||| Sbjct: 997 cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1056 Query: 553 gatgcagaggcatttgttgaagccatttt 581 ||||| ||||||||||||||||||||||| Sbjct: 1057 gatgctgaggcatttgttgaagccatttt 1085
>dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D11, full insert sequence Length = 1308 Score = 652 bits (329), Expect = 0.0 Identities = 509/569 (89%) Strand = Plus / Plus Query: 13 ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72 |||||||| ||||| ||||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 559 ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 618 Query: 73 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 619 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 678 Query: 133 gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192 || ||||| || ||||||||||| || ||||| |||||||| ||| | || |||||||| Sbjct: 679 gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 738 Query: 193 ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252 || ||||||||||| || || ||||||||||||||||||||| ||||||| || || ||| Sbjct: 739 ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 798 Query: 253 tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 799 tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 858 Query: 313 atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372 |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 859 atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 918 Query: 373 ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432 || || ||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 919 ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 978 Query: 433 attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492 | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 979 gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 1038 Query: 493 cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552 |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || |||||| Sbjct: 1039 cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1098 Query: 553 gatgcagaggcatttgttgaagccatttt 581 ||||| ||||||||||||||||||||||| Sbjct: 1099 gatgctgaggcatttgttgaagccatttt 1127
>dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J07, full insert sequence Length = 1221 Score = 652 bits (329), Expect = 0.0 Identities = 509/569 (89%) Strand = Plus / Plus Query: 13 ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72 |||||||| ||||| ||||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 472 ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 531 Query: 73 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 532 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 591 Query: 133 gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192 || ||||| || ||||||||||| || ||||| |||||||| ||| | || |||||||| Sbjct: 592 gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 651 Query: 193 ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252 || ||||||||||| || || ||||||||||||||||||||| ||||||| || || ||| Sbjct: 652 ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 711 Query: 253 tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 712 tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 771 Query: 313 atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372 |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 772 atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 831 Query: 373 ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432 || || ||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 832 ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 891 Query: 433 attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492 | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 892 gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 951 Query: 493 cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552 |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || |||||| Sbjct: 952 cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1011 Query: 553 gatgcagaggcatttgttgaagccatttt 581 ||||| ||||||||||||||||||||||| Sbjct: 1012 gatgctgaggcatttgttgaagccatttt 1040
>dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E11, full insert sequence Length = 1344 Score = 652 bits (329), Expect = 0.0 Identities = 509/569 (89%) Strand = Plus / Plus Query: 13 ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72 |||||||| ||||| ||||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 580 ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 639 Query: 73 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 640 ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 699 Query: 133 gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192 || ||||| || ||||||||||| || ||||| |||||||| ||| | || |||||||| Sbjct: 700 gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 759 Query: 193 ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252 || ||||||||||| || || ||||||||||||||||||||| ||||||| || || ||| Sbjct: 760 ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 819 Query: 253 tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 820 tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 879 Query: 313 atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372 |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 880 atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 939 Query: 373 ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432 || || ||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 940 ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 999 Query: 433 attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492 | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 1000 gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 1059 Query: 493 cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552 |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || |||||| Sbjct: 1060 cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1119 Query: 553 gatgcagaggcatttgttgaagccatttt 581 ||||| ||||||||||||||||||||||| Sbjct: 1120 gatgctgaggcatttgttgaagccatttt 1148
>emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP receptor cpFtsY precursor (csr1 gene) Length = 1699 Score = 563 bits (284), Expect = e-157 Identities = 503/576 (87%) Strand = Plus / Plus Query: 11 ggggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaagg 70 |||||||||| ||||||||||| || ||||| |||| |||||||| ||||||| |||| Sbjct: 555 ggggaaagacgacctcgctagggaagcttgcttacaggtttaagaacgaaggagtcaagg 614 Query: 71 tattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttggg 130 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 615 tattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttggg 674 Query: 131 ctgaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcag 190 |||| |||||||| ||||||||||||||||| || || |||||||||||| ||||| ||| Sbjct: 675 ctgagagaactggttcagagattgtcattgacaatgacaagaaggcacagcctccagcag 734 Query: 191 ttctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgata 250 ||||||||||||||||||| || |||||||||||||| |||||| | ||||||||||||| Sbjct: 735 ttctttcgcaggcagtaaagcgcgggaagcgtgaagggtttgatgtggttctatgtgata 794 Query: 251 cgtcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaag 310 | |||||| |||||||||||||||| ||| ||||||||||| ||||||||||||| |||| Sbjct: 795 catcaggaagacttcatacaaattatggtttgatggaagagctggtttcttgcaaaaaag 854 Query: 311 tcatagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaa 370 || |||||||||| || ||||||||||| |||||||| || |||||||| ||||| || | Sbjct: 855 tcctagctaaagcgcttcctggtgctccaaatgagattttactggttctcgatggaacga 914 Query: 371 ctggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggat 430 |||| || || ||| |||||||||| | ||||||||| |||||||| ||| |||| |||| Sbjct: 915 ctggcttgaacatgttacagcaagcaagggagttcaatgatgttgtaggagtcactggat 974 Query: 431 tcattctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacg 490 |||| ||||| ||||| || |||||||| || |||||||||||||| ||||| || || | Sbjct: 975 tcatcctgacaaagctcgatggcactgcgcgcggtggctgtgtggttagcgttgtggatg 1034 Query: 491 aacttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctt 550 | ||||| || || || ||||| |||| || || |||||| ||||||| || ||||||| Sbjct: 1035 agcttggcatcccggtgaagttcattggggttggtgaagggatggaagacctgcaacctt 1094 Query: 551 ttgatgcagaggcatttgttgaagccattttcccat 586 |||| || |||||||||||||||||||| ||||||| Sbjct: 1095 ttgacgccgaggcatttgttgaagccatcttcccat 1130
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 68 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaattt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 42228178 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagttt 42228119 Query: 128 gggctgaaagaactggctcagagattgtcattgataacgataagaa 173 |||| || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 42228118 gggcagagagaacaggttcagagattgttatcgataatgataagaa 42228073 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 260 gacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtcatagcta 319 |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 42227798 gacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtcatagcta 42227739 Query: 320 aagccctgcctggtgctcctaatg 343 ||||||| || ||||||||||||| Sbjct: 42227738 aagcccttccgggtgctcctaatg 42227715 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 478 agcgtcgtagacgaacttggaattccagtcaagtttgttggtgtcggcgaaggggtggaa 537 ||||| ||||| ||||||||||||||||| |||||| ||||||| || |||||| |||| Sbjct: 42227242 agcgttgtagatgaacttggaattccagtaaagtttattggtgttggtgaagggatggag 42227183 Query: 538 gatctccaaccttttgatgcagaggcatttgttgaagccatttt 581 ||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 42227182 gatcttcagccttttgatgctgaggcatttgttgaagccatttt 42227139 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 343 gagatcttgctggttctggatggcacaactggattaaatatgctacagcaagcgaaggag 402 |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| |||| Sbjct: 42227552 gagatcttgctggttctggatggcacgactggcttgaatatgctacaacaagcgagggag 42227493 Query: 403 ttcaacgatgt 413 ||||| ||||| Sbjct: 42227492 ttcaatgatgt 42227482 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 189 agttctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtga 248 |||||| ||||||||||| || || ||||||||||||||||||||| ||||||| || || Sbjct: 42227963 agttctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcga 42227904 Query: 249 tacgtcaggacg 260 ||||||||||| Sbjct: 42227903 cacgtcaggacg 42227892 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 412 gttgttggaatcacaggattcattctgacgaagctagacggcactgctcgtggtggctgt 471 ||||||||| ||||||||||| | || || ||||| || || |||||||||||||| ||| Sbjct: 42227394 gttgttggagtcacaggattcgtcctaacaaagcttgatggaactgctcgtggtggttgt 42227335 Query: 472 gtggt 476 ||||| Sbjct: 42227334 gtggt 42227330 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 29 taggaaaacttgcccacagatttaagaatgaaggagcgaaggt 71 ||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 42228375 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 42228333
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 68 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaattt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagttt 76 Query: 128 gggctgaaagaactggctcagagattgtcattgataacgataagaa 173 |||| || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 75 gggcagagagaacaggttcagagattgttatcgataatgataagaa 30 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 29 taggaaaacttgcccacagatttaagaatgaaggagcgaaggt 71 ||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 332 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 290
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 68 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaattt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 101376 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagttt 101317 Query: 128 gggctgaaagaactggctcagagattgtcattgataacgataagaa 173 |||| || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 101316 gggcagagagaacaggttcagagattgttatcgataatgataagaa 101271 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 260 gacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtcatagcta 319 |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 100996 gacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtcatagcta 100937 Query: 320 aagccctgcctggtgctcctaatg 343 ||||||| || ||||||||||||| Sbjct: 100936 aagcccttccgggtgctcctaatg 100913 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 478 agcgtcgtagacgaacttggaattccagtcaagtttgttggtgtcggcgaaggggtggaa 537 ||||| ||||| ||||||||||||||||| |||||| ||||||| || |||||| |||| Sbjct: 100440 agcgttgtagatgaacttggaattccagtaaagtttattggtgttggtgaagggatggag 100381 Query: 538 gatctccaaccttttgatgcagaggcatttgttgaagccatttt 581 ||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 100380 gatcttcagccttttgatgctgaggcatttgttgaagccatttt 100337 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 343 gagatcttgctggttctggatggcacaactggattaaatatgctacagcaagcgaaggag 402 |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| |||| Sbjct: 100750 gagatcttgctggttctggatggcacgactggcttgaatatgctacaacaagcgagggag 100691 Query: 403 ttcaacgatgt 413 ||||| ||||| Sbjct: 100690 ttcaatgatgt 100680 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 189 agttctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtga 248 |||||| ||||||||||| || || ||||||||||||||||||||| ||||||| || || Sbjct: 101161 agttctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcga 101102 Query: 249 tacgtcaggacg 260 ||||||||||| Sbjct: 101101 cacgtcaggacg 101090 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 412 gttgttggaatcacaggattcattctgacgaagctagacggcactgctcgtggtggctgt 471 ||||||||| ||||||||||| | || || ||||| || || |||||||||||||| ||| Sbjct: 100592 gttgttggagtcacaggattcgtcctaacaaagcttgatggaactgctcgtggtggttgt 100533 Query: 472 gtggt 476 ||||| Sbjct: 100532 gtggt 100528 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 29 taggaaaacttgcccacagatttaagaatgaaggagcgaaggt 71 ||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 101573 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 101531
>emb|BX819323.1|CNS0A8Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 73.8 bits (37), Expect = 6e-10 Identities = 190/241 (78%) Strand = Plus / Plus Query: 329 ctggtgctcctaatgagatcttgctggttctggatggcacaactggattaaatatgctac 388 ||||||| |||||||||||| | || || || ||||| | |||||| || || ||||| | Sbjct: 853 ctggtgcacctaatgagatcctacttgtccttgatggaaaaactggtttgaacatgcttc 912 Query: 389 agcaagcgaaggagttcaacgatgttgttggaatcacaggattcattctgacgaagctag 448 ||||| | || |||||||| |||||||| ||||| || || || ||||||| |||| Sbjct: 913 cacaagctagagaattcaacgaggttgttggtatcaccggtttgatattgacgaaactag 972 Query: 449 acggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtca 508 | ||| ||||| | || ||||||||||| || || || || ||| | || ||||| || | Sbjct: 973 atggctctgctagaggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaa 1032 Query: 509 agtttgttggtgtcggcgaaggggtggaagatctccaaccttttgatgcagaggcatttg 568 ||||| | ||||| || |||| || ||||||||||||||||||||| | ||||| |||| Sbjct: 1033 agtttatcggtgtaggagaagctgtagaagatctccaaccttttgatccggaggcttttg 1092 Query: 569 t 569 | Sbjct: 1093 t 1093 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 570 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 629 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 630 gcaagtgacca 640
>ref|NM_130140.2| Arabidopsis thaliana CPFTSY; GTP binding / RNA binding / nucleoside-triphosphatase/ nucleotide binding AT2G45770 (CPFTSY) mRNA, complete cds Length = 1438 Score = 69.9 bits (35), Expect = 9e-09 Identities = 134/167 (80%) Strand = Plus / Plus Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462 |||||||| |||||||| ||||| || || || ||||||| ||||| ||| ||||| | Sbjct: 946 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 1005 Query: 463 ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522 || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| Sbjct: 1006 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1065 Query: 523 ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569 || |||| || ||||||||||||||||||||| | ||||| ||||| Sbjct: 1066 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1112 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 589 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 648 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 649 gcaagtgacca 659
>gb|AY051026.1| Arabidopsis thaliana putative signal recognition particle receptor alpha subunit (At2g45770) mRNA, complete cds Length = 1132 Score = 69.9 bits (35), Expect = 9e-09 Identities = 134/167 (80%) Strand = Plus / Plus Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462 |||||||| |||||||| ||||| || || || ||||||| ||||| ||| ||||| | Sbjct: 916 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 975 Query: 463 ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522 || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| Sbjct: 976 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1035 Query: 523 ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569 || |||| || ||||||||||||||||||||| | ||||| ||||| Sbjct: 1036 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1082 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 559 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 618 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 619 gcaagtgacca 629
>gb|AF360125.1| Arabidopsis thaliana putative signal recognition particle receptor alpha subunit (At2g45770) mRNA, complete cds Length = 1454 Score = 69.9 bits (35), Expect = 9e-09 Identities = 134/167 (80%) Strand = Plus / Plus Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462 |||||||| |||||||| ||||| || || || ||||||| ||||| ||| ||||| | Sbjct: 946 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 1005 Query: 463 ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522 || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| Sbjct: 1006 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1065 Query: 523 ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569 || |||| || ||||||||||||||||||||| | ||||| ||||| Sbjct: 1066 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1112 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 589 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 648 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 649 gcaagtgacca 659
>emb|AJ010820.1|ATH010820 Arabidopsis thaliana mRNA for chloroplast FtsY homolog Length = 1374 Score = 69.9 bits (35), Expect = 9e-09 Identities = 134/167 (80%) Strand = Plus / Plus Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462 |||||||| |||||||| ||||| || || || ||||||| ||||| ||| ||||| | Sbjct: 926 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 985 Query: 463 ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522 || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| Sbjct: 986 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1045 Query: 523 ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569 || |||| || ||||||||||||||||||||| | ||||| ||||| Sbjct: 1046 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1092 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 569 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 628 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 629 gcaagtgacca 639
>emb|BX819043.1|CNS0A7Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1451 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 569 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 628 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 629 gcaagtgacca 639 Score = 44.1 bits (22), Expect = 0.52 Identities = 61/74 (82%) Strand = Plus / Plus Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462 |||||||| |||||||| ||||| || || || ||||||| ||||| ||| ||||| | Sbjct: 926 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 985 Query: 463 ggtggctgtgtggt 476 || ||||||||||| Sbjct: 986 ggaggctgtgtggt 999
>gb|AF120112.1|AF120112 Arabidopsis thaliana chloroplast SRP receptor homolog, alpha subunit CPFTSY mRNA, complete cds Length = 1103 Score = 69.9 bits (35), Expect = 9e-09 Identities = 134/167 (80%) Strand = Plus / Plus Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462 |||||||| |||||||| ||||| || || || ||||||| ||||| ||| ||||| | Sbjct: 916 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 975 Query: 463 ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522 || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| Sbjct: 976 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1035 Query: 523 ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569 || |||| || ||||||||||||||||||||| | ||||| ||||| Sbjct: 1036 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1082 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 46 agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105 ||||| || ||||||||| | |||||||| ||||||||||||||||| || ||||||||| Sbjct: 559 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 618 Query: 106 gctcgtgacca 116 || ||||||| Sbjct: 619 gcaagtgacca 629
>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete sequence Length = 101647 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 68 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgacca 116 ||||||| ||||||||||||||||| || ||||||||||| ||||||| Sbjct: 74511 aggtattaatggcagcaggtgatacatttagagcagcagcaagtgacca 74463 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 535 gaagatctccaaccttttgatgcagaggcatttgt 569 ||||||||||||||||||||| | ||||| ||||| Sbjct: 73567 gaagatctccaaccttttgatccggaggcttttgt 73533
>gb|DQ163154.1| Candidatus Hamiltonella defensa clone P020046 genomic sequence Length = 1491 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 ggtgataccttcagagcagcagc 107 ||||||||||||||||||||||| Sbjct: 1125 ggtgataccttcagagcagcagc 1147
>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence Length = 201130 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 417 tggaatcacaggattcattctg 438 |||||||||||||||||||||| Sbjct: 74209 tggaatcacaggattcattctg 74230
>gb|AC005009.1| Homo sapiens BAC clone GS1-67A24 from 7, complete sequence Length = 71235 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttgcccacagatttaagaat 57 ||||||||||||||||||||| Sbjct: 16936 cttgcccacagatttaagaat 16916
>gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, complete sequence Length = 232234 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 gccattttcccataaatttga 594 ||||||||||||||||||||| Sbjct: 115537 gccattttcccataaatttga 115557
>gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, complete sequence Length = 175672 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cttgcccacagatttaagaat 57 ||||||||||||||||||||| Sbjct: 81372 cttgcccacagatttaagaat 81392
>gb|AC142292.1| Pan troglodytes BAC clone RP43-185B17 from 7, complete sequence Length = 205976 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttgcccacagatttaagaat 57 ||||||||||||||||||||| Sbjct: 21627 cttgcccacagatttaagaat 21607
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 gcagcaggtgataccttcagagcagcagc 107 ||||||| |||||| |||||||||||||| Sbjct: 12600 gcagcagctgatactttcagagcagcagc 12628
>gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, complete sequence Length = 232199 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tgatattgttctatgtgata 250 |||||||||||||||||||| Sbjct: 227730 tgatattgttctatgtgata 227749
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccatcagttctttcgcag 201 |||||||||||||||||||| Sbjct: 74210 ctccatcagttctttcgcag 74191
>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence Length = 99587 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccatcagttctttcgcag 201 |||||||||||||||||||| Sbjct: 61528 ctccatcagttctttcgcag 61509
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ggcacaactggattaaatat 383 |||||||||||||||||||| Sbjct: 129349 ggcacaactggattaaatat 129330
>gb|AC117519.3| Homo sapiens 3 BAC RP11-54C22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 41182 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 atttgttgaagccattttcc 583 |||||||||||||||||||| Sbjct: 36834 atttgttgaagccattttcc 36815
>gb|AC124741.5| Mus musculus BAC clone RP23-357D17 from chromosome 3, complete sequence Length = 220887 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 ggcactgctcgtggtggctgtgtg 474 ||||||||||||| |||||||||| Sbjct: 175837 ggcactgctcgtgctggctgtgtg 175814
>gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence Length = 170587 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ggcacaactggattaaatat 383 |||||||||||||||||||| Sbjct: 151493 ggcacaactggattaaatat 151474
>emb|AL136109.11| Human DNA sequence from clone RP5-924G13 on chromosome 1 Contains a novel gene (KIAA1221) and a ribosomal protein L5 (RPL5) pseudogene, complete sequence Length = 126367 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 agaaggcacaggctccatca 189 |||||||||||||||||||| Sbjct: 93535 agaaggcacaggctccatca 93516
>gb|BC094228.1| Mus musculus leucine-rich repeats and immunoglobulin-like domains 2, mRNA (cDNA clone MGC:106698 IMAGE:30362610), complete cds Length = 7071 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 ggcactgctcgtggtggctgtgtg 474 ||||||||||||| |||||||||| Sbjct: 4907 ggcactgctcgtgctggctgtgtg 4930
>gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, complete sequence Length = 180614 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tgatattgttctatgtgata 250 |||||||||||||||||||| Sbjct: 142381 tgatattgttctatgtgata 142362
>dbj|AK033684.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130219J06 product:unclassifiable, full insert sequence Length = 2767 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 ggcactgctcgtggtggctgtgtg 474 ||||||||||||| |||||||||| Sbjct: 625 ggcactgctcgtgctggctgtgtg 648
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccatcagttctttcgcag 201 |||||||||||||||||||| Sbjct: 28646418 ctccatcagttctttcgcag 28646399
>dbj|AK173030.1| Mus musculus mRNA for mKIAA0806 protein Length = 5975 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 ggcactgctcgtggtggctgtgtg 474 ||||||||||||| |||||||||| Sbjct: 3845 ggcactgctcgtgctggctgtgtg 3868
>ref|NM_001025067.1| Mus musculus leucine-rich repeats and immunoglobulin-like domains 2 (Lrig2), mRNA Length = 7134 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 ggcactgctcgtggtggctgtgtg 474 ||||||||||||| |||||||||| Sbjct: 4970 ggcactgctcgtgctggctgtgtg 4993
>gb|AC119679.2| Homo sapiens chromosome 1 clone RP4-651N22, complete sequence Length = 119163 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 agaaggcacaggctccatca 189 |||||||||||||||||||| Sbjct: 6082 agaaggcacaggctccatca 6063
>dbj|AK107480.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C01, full insert sequence Length = 3451 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccatcagttctttcgcag 201 |||||||||||||||||||| Sbjct: 1358 ctccatcagttctttcgcag 1339
>emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-908D14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169496 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 aaatttgggctgaaagaact 141 |||||||||||||||||||| Sbjct: 55030 aaatttgggctgaaagaact 55049
>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174442 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aaatttgggctgaaagaact 141 |||||||||||||||||||| Sbjct: 27150 aaatttgggctgaaagaact 27131
>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown, complete sequence Length = 128941 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 aagaatgaaggagcgaaggtattgatgg 79 ||||||||||||| || ||||||||||| Sbjct: 31773 aagaatgaaggagagatggtattgatgg 31800
>gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complete sequence Length = 261825 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 ggcactgctcgtggtggctgtgtg 474 ||||||||||||| |||||||||| Sbjct: 204319 ggcactgctcgtgctggctgtgtg 204342
>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete sequence Length = 190994 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aagccctgcctggtgctcct 339 |||||||||||||||||||| Sbjct: 161945 aagccctgcctggtgctcct 161926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,128,678 Number of Sequences: 3902068 Number of extensions: 5128678 Number of successful extensions: 92480 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92343 Number of HSP's gapped (non-prelim): 136 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)