ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2o05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189333.1| Oryza sativa (japonica cultivar-group), predic... 652 0.0
2dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clon... 652 0.0
3dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 652 0.0
4dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 652 0.0
5emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP recep... 563 e-157
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
7dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
8dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
9emb|BX819323.1|CNS0A8Z3 Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
10ref|NM_130140.2| Arabidopsis thaliana CPFTSY; GTP binding / RNA ... 70 9e-09
11gb|AY051026.1| Arabidopsis thaliana putative signal recognition ... 70 9e-09
12gb|AF360125.1| Arabidopsis thaliana putative signal recognition ... 70 9e-09
13emb|AJ010820.1|ATH010820 Arabidopsis thaliana mRNA for chloropla... 70 9e-09
14emb|BX819043.1|CNS0A7Y2 Arabidopsis thaliana Full-length cDNA Co... 70 9e-09
15gb|AF120112.1|AF120112 Arabidopsis thaliana chloroplast SRP rece... 70 9e-09
16gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map... 58 3e-05
17gb|DQ163154.1| Candidatus Hamiltonella defensa clone P020046 gen... 46 0.13
18gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, co... 44 0.52
19gb|AC005009.1| Homo sapiens BAC clone GS1-67A24 from 7, complete... 42 2.1
20gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, co... 42 2.1
21gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, compl... 42 2.1
22gb|AC142292.1| Pan troglodytes BAC clone RP43-185B17 from 7, com... 42 2.1
23emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 42 2.1
24gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, co... 40 8.1
25gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
26gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
27gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, comp... 40 8.1
28gb|AC117519.3| Homo sapiens 3 BAC RP11-54C22 (Roswell Park Cance... 40 8.1
29gb|AC124741.5| Mus musculus BAC clone RP23-357D17 from chromosom... 40 8.1
30gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence 40 8.1
31emb|AL136109.11| Human DNA sequence from clone RP5-924G13 on chr... 40 8.1
32gb|BC094228.1| Mus musculus leucine-rich repeats and immunoglobu... 40 8.1
33gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, com... 40 8.1
34dbj|AK033684.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 8.1
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
36dbj|AK173030.1| Mus musculus mRNA for mKIAA0806 protein 40 8.1
37ref|NM_001025067.1| Mus musculus leucine-rich repeats and immuno... 40 8.1
38gb|AC119679.2| Homo sapiens chromosome 1 clone RP4-651N22, compl... 40 8.1
39dbj|AK107480.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
40emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-9... 40 8.1
41emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-4... 40 8.1
42gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 fr... 40 8.1
43gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complet... 40 8.1
44emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chr... 40 8.1 
>ref|NM_189333.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score =  652 bits (329), Expect = 0.0
 Identities = 509/569 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72
            |||||||| |||||  |||||||||||||  ||||||| ||||||||||||| |||||||
Sbjct: 517  ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 576

                                                                        
Query: 73   ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 577  ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 636

                                                                        
Query: 133  gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192
            || ||||| || ||||||||||| || ||||| |||||||| ||| |  || ||||||||
Sbjct: 637  gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 696

                                                                        
Query: 193  ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252
            || ||||||||||| || || ||||||||||||||||||||| ||||||| || || |||
Sbjct: 697  ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 756

                                                                        
Query: 253  tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312
            ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 757  tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 816

                                                                        
Query: 313  atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372
            |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 817  atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 876

                                                                        
Query: 373  ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432
            || || ||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 877  ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 936

                                                                        
Query: 433  attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492
             | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 937  gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 996

                                                                        
Query: 493  cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552
            |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || ||||||
Sbjct: 997  cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1056

                                         
Query: 553  gatgcagaggcatttgttgaagccatttt 581
            ||||| |||||||||||||||||||||||
Sbjct: 1057 gatgctgaggcatttgttgaagccatttt 1085
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>dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D11, full
            insert sequence
          Length = 1308

 Score =  652 bits (329), Expect = 0.0
 Identities = 509/569 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72
            |||||||| |||||  |||||||||||||  ||||||| ||||||||||||| |||||||
Sbjct: 559  ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 618

                                                                        
Query: 73   ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 619  ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 678

                                                                        
Query: 133  gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192
            || ||||| || ||||||||||| || ||||| |||||||| ||| |  || ||||||||
Sbjct: 679  gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 738

                                                                        
Query: 193  ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252
            || ||||||||||| || || ||||||||||||||||||||| ||||||| || || |||
Sbjct: 739  ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 798

                                                                        
Query: 253  tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312
            ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 799  tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 858

                                                                        
Query: 313  atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372
            |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 859  atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 918

                                                                        
Query: 373  ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432
            || || ||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 919  ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 978

                                                                        
Query: 433  attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492
             | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 979  gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 1038

                                                                        
Query: 493  cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552
            |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || ||||||
Sbjct: 1039 cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1098

                                         
Query: 553  gatgcagaggcatttgttgaagccatttt 581
            ||||| |||||||||||||||||||||||
Sbjct: 1099 gatgctgaggcatttgttgaagccatttt 1127
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>dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J07, full
            insert sequence
          Length = 1221

 Score =  652 bits (329), Expect = 0.0
 Identities = 509/569 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72
            |||||||| |||||  |||||||||||||  ||||||| ||||||||||||| |||||||
Sbjct: 472  ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 531

                                                                        
Query: 73   ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 532  ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 591

                                                                        
Query: 133  gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192
            || ||||| || ||||||||||| || ||||| |||||||| ||| |  || ||||||||
Sbjct: 592  gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 651

                                                                        
Query: 193  ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252
            || ||||||||||| || || ||||||||||||||||||||| ||||||| || || |||
Sbjct: 652  ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 711

                                                                        
Query: 253  tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312
            ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 712  tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 771

                                                                        
Query: 313  atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372
            |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 772  atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 831

                                                                        
Query: 373  ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432
            || || ||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 832  ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 891

                                                                        
Query: 433  attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492
             | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 892  gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 951

                                                                        
Query: 493  cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552
            |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || ||||||
Sbjct: 952  cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1011

                                         
Query: 553  gatgcagaggcatttgttgaagccatttt 581
            ||||| |||||||||||||||||||||||
Sbjct: 1012 gatgctgaggcatttgttgaagccatttt 1040
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>dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E11, full
            insert sequence
          Length = 1344

 Score =  652 bits (329), Expect = 0.0
 Identities = 509/569 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   ggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaaggta 72
            |||||||| |||||  |||||||||||||  ||||||| ||||||||||||| |||||||
Sbjct: 580  ggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggta 639

                                                                        
Query: 73   ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttgggct 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 640  ttgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggca 699

                                                                        
Query: 133  gaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcagtt 192
            || ||||| || ||||||||||| || ||||| |||||||| ||| |  || ||||||||
Sbjct: 700  gagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagtt 759

                                                                        
Query: 193  ctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgatacg 252
            || ||||||||||| || || ||||||||||||||||||||| ||||||| || || |||
Sbjct: 760  ctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacg 819

                                                                        
Query: 253  tcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtc 312
            ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 820  tcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtc 879

                                                                        
Query: 313  atagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaact 372
            |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 880  atagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgact 939

                                                                        
Query: 373  ggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggattc 432
            || || ||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 940  ggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattc 999

                                                                        
Query: 433  attctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaa 492
             | || || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 1000 gtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaa 1059

                                                                        
Query: 493  cttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctttt 552
            |||||||||||||| |||||| ||||||| || |||||| |||| ||||| || ||||||
Sbjct: 1060 cttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagcctttt 1119

                                         
Query: 553  gatgcagaggcatttgttgaagccatttt 581
            ||||| |||||||||||||||||||||||
Sbjct: 1120 gatgctgaggcatttgttgaagccatttt 1148
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>emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP receptor cpFtsY precursor (csr1
            gene)
          Length = 1699

 Score =  563 bits (284), Expect = e-157
 Identities = 503/576 (87%)
 Strand = Plus / Plus

                                                                        
Query: 11   ggggaaagacaacctcgctaggaaaacttgcccacagatttaagaatgaaggagcgaagg 70
            |||||||||| ||||||||||| || |||||  |||| |||||||| |||||||  ||||
Sbjct: 555  ggggaaagacgacctcgctagggaagcttgcttacaggtttaagaacgaaggagtcaagg 614

                                                                        
Query: 71   tattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaatttggg 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 615  tattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttggg 674

                                                                        
Query: 131  ctgaaagaactggctcagagattgtcattgataacgataagaaggcacaggctccatcag 190
            |||| |||||||| ||||||||||||||||| || || |||||||||||| ||||| |||
Sbjct: 675  ctgagagaactggttcagagattgtcattgacaatgacaagaaggcacagcctccagcag 734

                                                                        
Query: 191  ttctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtgata 250
            ||||||||||||||||||| || |||||||||||||| |||||| | |||||||||||||
Sbjct: 735  ttctttcgcaggcagtaaagcgcgggaagcgtgaagggtttgatgtggttctatgtgata 794

                                                                        
Query: 251  cgtcaggacgacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaag 310
            | |||||| |||||||||||||||| ||| ||||||||||| ||||||||||||| ||||
Sbjct: 795  catcaggaagacttcatacaaattatggtttgatggaagagctggtttcttgcaaaaaag 854

                                                                        
Query: 311  tcatagctaaagccctgcctggtgctcctaatgagatcttgctggttctggatggcacaa 370
            || |||||||||| || ||||||||||| |||||||| || |||||||| ||||| || |
Sbjct: 855  tcctagctaaagcgcttcctggtgctccaaatgagattttactggttctcgatggaacga 914

                                                                        
Query: 371  ctggattaaatatgctacagcaagcgaaggagttcaacgatgttgttggaatcacaggat 430
            |||| || || ||| |||||||||| | ||||||||| |||||||| ||| |||| ||||
Sbjct: 915  ctggcttgaacatgttacagcaagcaagggagttcaatgatgttgtaggagtcactggat 974

                                                                        
Query: 431  tcattctgacgaagctagacggcactgctcgtggtggctgtgtggtgagcgtcgtagacg 490
            |||| ||||| ||||| || |||||||| || |||||||||||||| ||||| || || |
Sbjct: 975  tcatcctgacaaagctcgatggcactgcgcgcggtggctgtgtggttagcgttgtggatg 1034

                                                                        
Query: 491  aacttggaattccagtcaagtttgttggtgtcggcgaaggggtggaagatctccaacctt 550
            | ||||| || || || |||||  |||| || || |||||| ||||||| || |||||||
Sbjct: 1035 agcttggcatcccggtgaagttcattggggttggtgaagggatggaagacctgcaacctt 1094

                                                
Query: 551  ttgatgcagaggcatttgttgaagccattttcccat 586
            |||| || |||||||||||||||||||| |||||||
Sbjct: 1095 ttgacgccgaggcatttgttgaagccatcttcccat 1130
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 5e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                            
Query: 68       aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaattt 127
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 42228178 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagttt 42228119

                                                              
Query: 128      gggctgaaagaactggctcagagattgtcattgataacgataagaa 173
                |||| || ||||| || ||||||||||| || ||||| ||||||||
Sbjct: 42228118 gggcagagagaacaggttcagagattgttatcgataatgataagaa 42228073



 Score =  127 bits (64), Expect = 4e-26
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                            
Query: 260      gacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtcatagcta 319
                |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 42227798 gacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtcatagcta 42227739

                                        
Query: 320      aagccctgcctggtgctcctaatg 343
                ||||||| || |||||||||||||
Sbjct: 42227738 aagcccttccgggtgctcctaatg 42227715



 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                            
Query: 478      agcgtcgtagacgaacttggaattccagtcaagtttgttggtgtcggcgaaggggtggaa 537
                ||||| ||||| ||||||||||||||||| |||||| ||||||| || |||||| |||| 
Sbjct: 42227242 agcgttgtagatgaacttggaattccagtaaagtttattggtgttggtgaagggatggag 42227183

                                                            
Query: 538      gatctccaaccttttgatgcagaggcatttgttgaagccatttt 581
                ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 42227182 gatcttcagccttttgatgctgaggcatttgttgaagccatttt 42227139



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 343      gagatcttgctggttctggatggcacaactggattaaatatgctacagcaagcgaaggag 402
                |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||
Sbjct: 42227552 gagatcttgctggttctggatggcacgactggcttgaatatgctacaacaagcgagggag 42227493

                           
Query: 403      ttcaacgatgt 413
                ||||| |||||
Sbjct: 42227492 ttcaatgatgt 42227482



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                            
Query: 189      agttctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtga 248
                |||||| ||||||||||| || || ||||||||||||||||||||| ||||||| || ||
Sbjct: 42227963 agttctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcga 42227904

                            
Query: 249      tacgtcaggacg 260
                 |||||||||||
Sbjct: 42227903 cacgtcaggacg 42227892



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 412      gttgttggaatcacaggattcattctgacgaagctagacggcactgctcgtggtggctgt 471
                ||||||||| ||||||||||| | || || ||||| || || |||||||||||||| |||
Sbjct: 42227394 gttgttggagtcacaggattcgtcctaacaaagcttgatggaactgctcgtggtggttgt 42227335

                     
Query: 472      gtggt 476
                |||||
Sbjct: 42227334 gtggt 42227330



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 29       taggaaaacttgcccacagatttaagaatgaaggagcgaaggt 71
                |||||||||||||  ||||||| ||||||||||||| ||||||
Sbjct: 42228375 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 42228333
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0401G10
          Length = 160704

 Score =  147 bits (74), Expect = 5e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                       
Query: 68  aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaattt 127
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 135 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagttt 76

                                                         
Query: 128 gggctgaaagaactggctcagagattgtcattgataacgataagaa 173
           |||| || ||||| || ||||||||||| || ||||| ||||||||
Sbjct: 75  gggcagagagaacaggttcagagattgttatcgataatgataagaa 30



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 29  taggaaaacttgcccacagatttaagaatgaaggagcgaaggt 71
           |||||||||||||  ||||||| ||||||||||||| ||||||
Sbjct: 332 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 290
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1294_F06
          Length = 121088

 Score =  147 bits (74), Expect = 5e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                          
Query: 68     aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaaattt 127
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 101376 aggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagttt 101317

                                                            
Query: 128    gggctgaaagaactggctcagagattgtcattgataacgataagaa 173
              |||| || ||||| || ||||||||||| || ||||| ||||||||
Sbjct: 101316 gggcagagagaacaggttcagagattgttatcgataatgataagaa 101271



 Score =  127 bits (64), Expect = 4e-26
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                          
Query: 260    gacttcatacaaattacggtctgatggaagagttggtttcttgcaagaaagtcatagcta 319
              |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 100996 gacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtcatagcta 100937

                                      
Query: 320    aagccctgcctggtgctcctaatg 343
              ||||||| || |||||||||||||
Sbjct: 100936 aagcccttccgggtgctcctaatg 100913



 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                          
Query: 478    agcgtcgtagacgaacttggaattccagtcaagtttgttggtgtcggcgaaggggtggaa 537
              ||||| ||||| ||||||||||||||||| |||||| ||||||| || |||||| |||| 
Sbjct: 100440 agcgttgtagatgaacttggaattccagtaaagtttattggtgttggtgaagggatggag 100381

                                                          
Query: 538    gatctccaaccttttgatgcagaggcatttgttgaagccatttt 581
              ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 100380 gatcttcagccttttgatgctgaggcatttgttgaagccatttt 100337



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                          
Query: 343    gagatcttgctggttctggatggcacaactggattaaatatgctacagcaagcgaaggag 402
              |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||
Sbjct: 100750 gagatcttgctggttctggatggcacgactggcttgaatatgctacaacaagcgagggag 100691

                         
Query: 403    ttcaacgatgt 413
              ||||| |||||
Sbjct: 100690 ttcaatgatgt 100680



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                          
Query: 189    agttctttcgcaggcagtaaaacgtgggaagcgtgaaggatttgatattgttctatgtga 248
              |||||| ||||||||||| || || ||||||||||||||||||||| ||||||| || ||
Sbjct: 101161 agttctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcga 101102

                          
Query: 249    tacgtcaggacg 260
               |||||||||||
Sbjct: 101101 cacgtcaggacg 101090



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 412    gttgttggaatcacaggattcattctgacgaagctagacggcactgctcgtggtggctgt 471
              ||||||||| ||||||||||| | || || ||||| || || |||||||||||||| |||
Sbjct: 100592 gttgttggagtcacaggattcgtcctaacaaagcttgatggaactgctcgtggtggttgt 100533

                   
Query: 472    gtggt 476
              |||||
Sbjct: 100532 gtggt 100528



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 29     taggaaaacttgcccacagatttaagaatgaaggagcgaaggt 71
              |||||||||||||  ||||||| ||||||||||||| ||||||
Sbjct: 101573 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 101531
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>emb|BX819323.1|CNS0A8Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB68ZF02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1356

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 190/241 (78%)
 Strand = Plus / Plus

                                                                        
Query: 329  ctggtgctcctaatgagatcttgctggttctggatggcacaactggattaaatatgctac 388
            ||||||| |||||||||||| | || || || ||||| | |||||| || || ||||| |
Sbjct: 853  ctggtgcacctaatgagatcctacttgtccttgatggaaaaactggtttgaacatgcttc 912

                                                                        
Query: 389  agcaagcgaaggagttcaacgatgttgttggaatcacaggattcattctgacgaagctag 448
              ||||| |  || |||||||| |||||||| ||||| || || ||  ||||||| ||||
Sbjct: 913  cacaagctagagaattcaacgaggttgttggtatcaccggtttgatattgacgaaactag 972

                                                                        
Query: 449  acggcactgctcgtggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtca 508
            | ||| ||||| | || ||||||||||| || || || || ||| | || ||||| || |
Sbjct: 973  atggctctgctagaggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaa 1032

                                                                        
Query: 509  agtttgttggtgtcggcgaaggggtggaagatctccaaccttttgatgcagaggcatttg 568
            ||||| | ||||| || ||||  || ||||||||||||||||||||| | ||||| ||||
Sbjct: 1033 agtttatcggtgtaggagaagctgtagaagatctccaaccttttgatccggaggcttttg 1092

             
Query: 569  t 569
            |
Sbjct: 1093 t 1093



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 570 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 629

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 630 gcaagtgacca 640
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>ref|NM_130140.2| Arabidopsis thaliana CPFTSY; GTP binding / RNA binding /
            nucleoside-triphosphatase/ nucleotide binding AT2G45770
            (CPFTSY) mRNA, complete cds
          Length = 1438

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 134/167 (80%)
 Strand = Plus / Plus

                                                                        
Query: 403  ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462
            |||||||| |||||||| ||||| || || ||  ||||||| ||||| ||| ||||| | 
Sbjct: 946  ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 1005

                                                                        
Query: 463  ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522
            || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| 
Sbjct: 1006 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1065

                                                           
Query: 523  ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569
            || ||||  || ||||||||||||||||||||| | ||||| |||||
Sbjct: 1066 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1112



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 589 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 648

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 649 gcaagtgacca 659
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>gb|AY051026.1| Arabidopsis thaliana putative signal recognition particle receptor
            alpha subunit (At2g45770) mRNA, complete cds
          Length = 1132

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 134/167 (80%)
 Strand = Plus / Plus

                                                                        
Query: 403  ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462
            |||||||| |||||||| ||||| || || ||  ||||||| ||||| ||| ||||| | 
Sbjct: 916  ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 975

                                                                        
Query: 463  ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522
            || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| 
Sbjct: 976  ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1035

                                                           
Query: 523  ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569
            || ||||  || ||||||||||||||||||||| | ||||| |||||
Sbjct: 1036 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1082



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 559 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 618

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 619 gcaagtgacca 629
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>gb|AF360125.1| Arabidopsis thaliana putative signal recognition particle receptor
            alpha subunit (At2g45770) mRNA, complete cds
          Length = 1454

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 134/167 (80%)
 Strand = Plus / Plus

                                                                        
Query: 403  ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462
            |||||||| |||||||| ||||| || || ||  ||||||| ||||| ||| ||||| | 
Sbjct: 946  ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 1005

                                                                        
Query: 463  ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522
            || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| 
Sbjct: 1006 ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1065

                                                           
Query: 523  ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569
            || ||||  || ||||||||||||||||||||| | ||||| |||||
Sbjct: 1066 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1112



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 589 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 648

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 649 gcaagtgacca 659
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>emb|AJ010820.1|ATH010820 Arabidopsis thaliana mRNA for chloroplast FtsY homolog
          Length = 1374

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 134/167 (80%)
 Strand = Plus / Plus

                                                                        
Query: 403  ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462
            |||||||| |||||||| ||||| || || ||  ||||||| ||||| ||| ||||| | 
Sbjct: 926  ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 985

                                                                        
Query: 463  ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522
            || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| 
Sbjct: 986  ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1045

                                                           
Query: 523  ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569
            || ||||  || ||||||||||||||||||||| | ||||| |||||
Sbjct: 1046 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1092



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 569 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 628

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 629 gcaagtgacca 639
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>emb|BX819043.1|CNS0A7Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZA07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1451

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 569 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 628

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 629 gcaagtgacca 639



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 403 ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462
           |||||||| |||||||| ||||| || || ||  ||||||| ||||| ||| ||||| | 
Sbjct: 926 ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 985

                         
Query: 463 ggtggctgtgtggt 476
           || |||||||||||
Sbjct: 986 ggaggctgtgtggt 999
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>gb|AF120112.1|AF120112 Arabidopsis thaliana chloroplast SRP receptor homolog, alpha subunit
            CPFTSY mRNA, complete cds
          Length = 1103

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 134/167 (80%)
 Strand = Plus / Plus

                                                                        
Query: 403  ttcaacgatgttgttggaatcacaggattcattctgacgaagctagacggcactgctcgt 462
            |||||||| |||||||| ||||| || || ||  ||||||| ||||| ||| ||||| | 
Sbjct: 916  ttcaacgaggttgttggtatcaccggtttgatattgacgaaactagatggctctgctaga 975

                                                                        
Query: 463  ggtggctgtgtggtgagcgtcgtagacgaacttggaattccagtcaagtttgttggtgtc 522
            || ||||||||||| || || || || ||| | || ||||| || |||||| | ||||| 
Sbjct: 976  ggaggctgtgtggtcagtgtggttgaggaattgggcattcccgtaaagtttatcggtgta 1035

                                                           
Query: 523  ggcgaaggggtggaagatctccaaccttttgatgcagaggcatttgt 569
            || ||||  || ||||||||||||||||||||| | ||||| |||||
Sbjct: 1036 ggagaagctgtagaagatctccaaccttttgatccggaggcttttgt 1082



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  agatttaagaatgaaggagcgaaggtattgatggcagcaggtgataccttcagagcagca 105
           ||||| || ||||||||| | |||||||| ||||||||||||||||| || |||||||||
Sbjct: 559 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatacatttagagcagca 618

                      
Query: 106 gctcgtgacca 116
           ||  |||||||
Sbjct: 619 gcaagtgacca 629
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>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete
             sequence
          Length = 101647

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 68    aggtattgatggcagcaggtgataccttcagagcagcagctcgtgacca 116
             ||||||| ||||||||||||||||| || |||||||||||  |||||||
Sbjct: 74511 aggtattaatggcagcaggtgatacatttagagcagcagcaagtgacca 74463



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 535   gaagatctccaaccttttgatgcagaggcatttgt 569
             ||||||||||||||||||||| | ||||| |||||
Sbjct: 73567 gaagatctccaaccttttgatccggaggcttttgt 73533
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>gb|DQ163154.1| Candidatus Hamiltonella defensa clone P020046 genomic sequence
          Length = 1491

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 85   ggtgataccttcagagcagcagc 107
            |||||||||||||||||||||||
Sbjct: 1125 ggtgataccttcagagcagcagc 1147
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>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence
          Length = 201130

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 417   tggaatcacaggattcattctg 438
             ||||||||||||||||||||||
Sbjct: 74209 tggaatcacaggattcattctg 74230
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>gb|AC005009.1| Homo sapiens BAC clone GS1-67A24 from 7, complete sequence
          Length = 71235

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    cttgcccacagatttaagaat 57
             |||||||||||||||||||||
Sbjct: 16936 cttgcccacagatttaagaat 16916
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>gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, complete sequence
          Length = 232234

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 574    gccattttcccataaatttga 594
              |||||||||||||||||||||
Sbjct: 115537 gccattttcccataaatttga 115557
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>gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, complete sequence
          Length = 175672

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    cttgcccacagatttaagaat 57
             |||||||||||||||||||||
Sbjct: 81372 cttgcccacagatttaagaat 81392
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>gb|AC142292.1| Pan troglodytes BAC clone RP43-185B17 from 7, complete sequence
          Length = 205976

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    cttgcccacagatttaagaat 57
             |||||||||||||||||||||
Sbjct: 21627 cttgcccacagatttaagaat 21607
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>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 79    gcagcaggtgataccttcagagcagcagc 107
             ||||||| |||||| ||||||||||||||
Sbjct: 12600 gcagcagctgatactttcagagcagcagc 12628
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>gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, complete sequence
          Length = 232199

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tgatattgttctatgtgata 250
              ||||||||||||||||||||
Sbjct: 227730 tgatattgttctatgtgata 227749
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>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017N18, complete sequence
          Length = 156643

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   ctccatcagttctttcgcag 201
             ||||||||||||||||||||
Sbjct: 74210 ctccatcagttctttcgcag 74191
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>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I,
             complete sequence
          Length = 99587

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   ctccatcagttctttcgcag 201
             ||||||||||||||||||||
Sbjct: 61528 ctccatcagttctttcgcag 61509
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>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence
          Length = 234420

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    ggcacaactggattaaatat 383
              ||||||||||||||||||||
Sbjct: 129349 ggcacaactggattaaatat 129330
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>gb|AC117519.3| Homo sapiens 3 BAC RP11-54C22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 41182

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 564   atttgttgaagccattttcc 583
             ||||||||||||||||||||
Sbjct: 36834 atttgttgaagccattttcc 36815
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>gb|AC124741.5| Mus musculus BAC clone RP23-357D17 from chromosome 3, complete sequence
          Length = 220887

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 451    ggcactgctcgtggtggctgtgtg 474
              ||||||||||||| ||||||||||
Sbjct: 175837 ggcactgctcgtgctggctgtgtg 175814
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>gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence
          Length = 170587

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    ggcacaactggattaaatat 383
              ||||||||||||||||||||
Sbjct: 151493 ggcacaactggattaaatat 151474
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>emb|AL136109.11| Human DNA sequence from clone RP5-924G13 on chromosome 1 Contains a
             novel gene (KIAA1221) and a ribosomal protein L5 (RPL5)
             pseudogene, complete sequence
          Length = 126367

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   agaaggcacaggctccatca 189
             ||||||||||||||||||||
Sbjct: 93535 agaaggcacaggctccatca 93516
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>gb|BC094228.1| Mus musculus leucine-rich repeats and immunoglobulin-like domains 2,
            mRNA (cDNA clone MGC:106698 IMAGE:30362610), complete cds
          Length = 7071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 451  ggcactgctcgtggtggctgtgtg 474
            ||||||||||||| ||||||||||
Sbjct: 4907 ggcactgctcgtgctggctgtgtg 4930
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>gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, complete sequence
          Length = 180614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tgatattgttctatgtgata 250
              ||||||||||||||||||||
Sbjct: 142381 tgatattgttctatgtgata 142362
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>dbj|AK033684.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
           library, clone:9130219J06 product:unclassifiable, full
           insert sequence
          Length = 2767

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 451 ggcactgctcgtggtggctgtgtg 474
           ||||||||||||| ||||||||||
Sbjct: 625 ggcactgctcgtgctggctgtgtg 648
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 182      ctccatcagttctttcgcag 201
                ||||||||||||||||||||
Sbjct: 28646418 ctccatcagttctttcgcag 28646399
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>dbj|AK173030.1| Mus musculus mRNA for mKIAA0806 protein
          Length = 5975

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 451  ggcactgctcgtggtggctgtgtg 474
            ||||||||||||| ||||||||||
Sbjct: 3845 ggcactgctcgtgctggctgtgtg 3868
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>ref|NM_001025067.1| Mus musculus leucine-rich repeats and immunoglobulin-like domains 2
            (Lrig2), mRNA
          Length = 7134

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 451  ggcactgctcgtggtggctgtgtg 474
            ||||||||||||| ||||||||||
Sbjct: 4970 ggcactgctcgtgctggctgtgtg 4993
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>gb|AC119679.2| Homo sapiens chromosome 1 clone RP4-651N22, complete sequence
          Length = 119163

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  agaaggcacaggctccatca 189
            ||||||||||||||||||||
Sbjct: 6082 agaaggcacaggctccatca 6063
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>dbj|AK107480.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C01, full
            insert sequence
          Length = 3451

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  ctccatcagttctttcgcag 201
            ||||||||||||||||||||
Sbjct: 1358 ctccatcagttctttcgcag 1339
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>emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-908D14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169496

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   aaatttgggctgaaagaact 141
             ||||||||||||||||||||
Sbjct: 55030 aaatttgggctgaaagaact 55049
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>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174442

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   aaatttgggctgaaagaact 141
             ||||||||||||||||||||
Sbjct: 27150 aaatttgggctgaaagaact 27131
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>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown,
             complete sequence
          Length = 128941

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 52    aagaatgaaggagcgaaggtattgatgg 79
             ||||||||||||| || |||||||||||
Sbjct: 31773 aagaatgaaggagagatggtattgatgg 31800
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>gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complete sequence
          Length = 261825

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 451    ggcactgctcgtggtggctgtgtg 474
              ||||||||||||| ||||||||||
Sbjct: 204319 ggcactgctcgtgctggctgtgtg 204342
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>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
              sequence
          Length = 190994

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aagccctgcctggtgctcct 339
              ||||||||||||||||||||
Sbjct: 161945 aagccctgcctggtgctcct 161926


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,128,678
Number of Sequences: 3902068
Number of extensions: 5128678
Number of successful extensions: 92480
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92343
Number of HSP's gapped (non-prelim): 136
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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