ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2l16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLK_RHIME (Q92T27) Glucokinase (EC 2.7.1.2) (Glucose kinase) 29 9.1

>GLK_RHIME (Q92T27) Glucokinase (EC 2.7.1.2) (Glucose kinase)|
          Length = 339

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = -1

Query: 395 FLGQRLGMHRIQDSARIGPFSAGFGCSQILLPGQTKPES*FAYAD 261
           +LG+  G   +   AR G F AG G SQ +LP  TKPE   A+ D
Sbjct: 249 YLGRVAGDMALIFMARGGVFLAG-GISQKILPALTKPEFRAAFED 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,195,201
Number of Sequences: 219361
Number of extensions: 2329465
Number of successful extensions: 5429
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5420
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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