ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472545.1| Oryza sativa (japonica cultivar-group), predic... 248 2e-62
2dbj|AK101973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
3gb|AY110636.1| Zea mays CL4177_1 mRNA sequence 236 7e-59
4emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 224 3e-55
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
6gb|BC072660.1| Mus musculus solute carrier family 25 (mitochondr... 52 0.002
7ref|NM_025877.3| Mus musculus solute carrier family 25 (mitochon... 52 0.002
8emb|CT571247.13| Mouse DNA sequence from clone RP24-116C19 on ch... 52 0.002
9ref|NM_024103.2| Homo sapiens solute carrier family 25 (mitochon... 50 0.009
10ref|XM_542138.2| PREDICTED: Canis familiaris similar to solute c... 50 0.009
11ref|XM_863299.1| PREDICTED: Canis familiaris similar to solute c... 50 0.009
12ref|XM_863292.1| PREDICTED: Canis familiaris similar to solute c... 50 0.009
13gb|BC001656.1| Homo sapiens solute carrier family 25 (mitochondr... 50 0.009
14emb|AJ619988.1| Homo sapiens mRNA for small calcium-binding mito... 50 0.009
15emb|AJ619962.1| Homo sapiens partial mRNA for mitochondrial ATP-... 50 0.009
16emb|AJ512835.1|HSA512835 Homo sapiens mRNA for putative calcium ... 50 0.009
17gb|AC010503.8| Homo sapiens chromosome 19 clone CTD-2396E7, comp... 50 0.009
18ref|XM_217310.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 50 0.009
19emb|AJ324213.1|HSA324213 Homo sapiens genomic sequence surroundi... 50 0.009
20gb|AY750170.1| Homo sapiens mitochondrial Ca2+-dependent solute ... 50 0.009
21ref|XM_539776.2| PREDICTED: Canis familiaris similar to dachsous... 44 0.57
22gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, com... 42 2.3
23gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, com... 42 2.3
24emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chr... 42 2.3
25emb|AL732327.6| Human DNA sequence from clone RP11-387P24 on chr... 40 8.9
26emb|AL451080.11| Human DNA sequence from clone RP11-323B13 on ch... 40 8.9
27gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3... 40 8.9
28emb|AJ301654.1|ECH301654 Erwinia chrysanthemi ATPase operon (suf... 40 8.9
29gb|AC090009.9| Homo sapiens 12 BAC RP11-724J16 (Roswell Park Can... 40 8.9
30gb|AC093015.5| Homo sapiens 12q BAC RP11-534K23 (Roswell Park Ca... 40 8.9
31gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cance... 40 8.9
32gb|AC107965.4| Homo sapiens chromosome 8, clone CTD-2332A4, comp... 40 8.9
33gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, com... 40 8.9
34gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, com... 40 8.9
35gb|AC097455.3| Homo sapiens BAC clone RP11-2J13 from 4, complete... 40 8.9
36gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, c... 40 8.9
37gb|AC127518.8| Homo sapiens chromosome 17, clone RP13-629P20, co... 40 8.9
38emb|AL953894.5| Zebrafish DNA sequence from clone CH211-212B13 i... 40 8.9
39emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chr... 40 8.9 
>ref|XM_472545.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score =  248 bits (125), Expect = 2e-62
 Identities = 387/473 (81%), Gaps = 1/473 (0%)
 Strand = Plus / Plus

                                                                       
Query: 182 tccggcgccccaatgcagcgctgccgccgctccgcgtcgctggcgctgacccgcagattg 241
           |||||||| || |||| |||| |||||||||||| | ||| | |||||||||  || |||
Sbjct: 152 tccggcgcacccatgccgcgccgccgccgctccgtgccgccgccgctgaccccaaggttg 211

                                                                       
Query: 242 taaatggggaagatttccctcctatgaacgaccttattcgactatacaagaaagcctttc 301
           | ||||||||||||||||| |||||||| |||||  |||| |||||||||||||| ||||
Sbjct: 212 ttaatggggaagatttcccccctatgaaggacctacttcgtctatacaagaaagcttttc 271

                                                                       
Query: 302 tggatggaaacgaagatgttgttagtgacatcgagaaggcaatcactagcatggaggaag 361
           | |||||||| || || | | || |||  || ||||  || |||| |  ||| ||| |||
Sbjct: 272 tagatggaaatgatgaggctcttggtggaattgagagtgctatcattgccattgagaaag 331

                                                                       
Query: 362 agagaagtaaagcagcttctcagtttgacagtatcacagctgaaataacttcagggaaga 421
           | || |||||  ||||| |||||| ||| |||||  || | ||||| |||||||||||| 
Sbjct: 332 aaaggagtaactcagctgctcagtatgaaagtattgcaaccgaaattacttcagggaagg 391

                                                                       
Query: 422 ataagtttcttcgcttaaatgctgatctagagaatttccggaagcagactgaaaaggacc 481
           | ||||| || ||  ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 392 acaagttcctccgtataaatgctgatctggagaatttccggaagcagactgaaaaggagc 451

                                                                       
Query: 482 gtgcaaagtttacatcgaatatacaagtggaacttgtacagagtctgttaccttctggtt 541
           |||| | |||||| || |||||||| |||||  |||| |||||||| ||  | |||||||
Sbjct: 452 gtgctaggtttacctcaaatatacaggtggatgttgttcagagtctattgac-tctggtt 510

                                                                       
Query: 542 gatagcttcgagaaaacaaatgtagaggtcacactagagactgagaaagagcagaagatt 601
           ||||| || |||||    |||  |||| |||| |  |||||||| |||||||||| ||||
Sbjct: 511 gatagttttgagaaggtgaatcaagagatcaccccggagactgataaagagcagacgatt 570

                                                                
Query: 602 agcacaagctatcaaggcatatacaagcaattagtagaaacactgaaaagctt 654
           ||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||
Sbjct: 571 agcacaagctatcaaggcatatacaagcagttagtagagacattgagaagctt 623
to top
>dbj|AK101973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N12, full
           insert sequence
          Length = 1180

 Score =  240 bits (121), Expect = 5e-60
 Identities = 386/473 (81%), Gaps = 1/473 (0%)
 Strand = Plus / Plus

                                                                       
Query: 182 tccggcgccccaatgcagcgctgccgccgctccgcgtcgctggcgctgacccgcagattg 241
           |||||||| || |||| |||| |||||||||||| | ||| | |||||||||  || |||
Sbjct: 250 tccggcgcacccatgccgcgccgccgccgctccgtgccgccgccgctgaccccaaggttg 309

                                                                       
Query: 242 taaatggggaagatttccctcctatgaacgaccttattcgactatacaagaaagcctttc 301
           | ||||||||||||||||| |||||||| |||||  |||| |||||||||||||| || |
Sbjct: 310 ttaatggggaagatttcccccctatgaaggacctacttcgtctatacaagaaagctttcc 369

                                                                       
Query: 302 tggatggaaacgaagatgttgttagtgacatcgagaaggcaatcactagcatggaggaag 361
           | |||||||| || || | | || |||  || ||||  || |||| |  ||| ||| |||
Sbjct: 370 tagatggaaatgatgaggctcttggtggaattgagagtgctatcattgccattgagaaag 429

                                                                       
Query: 362 agagaagtaaagcagcttctcagtttgacagtatcacagctgaaataacttcagggaaga 421
           | || |||||  ||||| |||||| ||| |||||  || | ||||| |||||||||||| 
Sbjct: 430 aaaggagtaactcagctgctcagtatgaaagtattgcaaccgaaattacttcagggaagg 489

                                                                       
Query: 422 ataagtttcttcgcttaaatgctgatctagagaatttccggaagcagactgaaaaggacc 481
           | ||||| || ||  ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 490 acaagttcctccgtataaatgctgatctggagaatttccggaagcagactgaaaaggagc 549

                                                                       
Query: 482 gtgcaaagtttacatcgaatatacaagtggaacttgtacagagtctgttaccttctggtt 541
           |||| | |||||| || |||||||| |||||  |||| |||||||| ||  | |||||||
Sbjct: 550 gtgctaggtttacctcaaatatacaggtggatgttgttcagagtctattgac-tctggtt 608

                                                                       
Query: 542 gatagcttcgagaaaacaaatgtagaggtcacactagagactgagaaagagcagaagatt 601
           ||||| || |||||    |||  |||| |||| |  |||||||| |||||||||| ||||
Sbjct: 609 gatagttttgagaaggtgaatcaagagatcaccccggagactgataaagagcagacgatt 668

                                                                
Query: 602 agcacaagctatcaaggcatatacaagcaattagtagaaacactgaaaagctt 654
           ||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||
Sbjct: 669 agcacaagctatcaaggcatatacaagcagttagtagagacattgagaagctt 721
to top
>gb|AY110636.1| Zea mays CL4177_1 mRNA sequence
          Length = 1088

 Score =  236 bits (119), Expect = 7e-59
 Identities = 213/243 (87%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                       
Query: 403 gaaataacttcagggaagaataagtttcttcgcttaaatgctgatctagagaatttccgg 462
           ||||||||||| |||||| | |||||| ||||||||||||| || || ||||||||||||
Sbjct: 391 gaaataacttctgggaaggaaaagtttattcgcttaaatgccgacctggagaatttccgg 450

                                                                       
Query: 463 aagcagactgaaaaggaccgtgcaaagtttacatcgaatatacaagtggaacttgtacag 522
           || |||||||||||||||||||||||||| ||||| |||||||  |||||| |||| |||
Sbjct: 451 aaacagactgaaaaggaccgtgcaaagttaacatcaaatatacgggtggaagttgttcag 510

                                                                       
Query: 523 agtctgttaccttctggttgatagcttcgagaaaacaaatgtagaggtcacactagagac 582
           ||||||||||| ||| |||||||| || ||||||| |||| |||||  ||| | ||||||
Sbjct: 511 agtctgttacc-tctagttgatagttttgagaaaataaatctagagaacaccccagagac 569

                                                                       
Query: 583 tgagaaagagcagaagattagcacaagctatcaaggcatatacaagcaattagtagaaac 642
           |||||| ||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 570 tgagaaggagcaaaagatcagcgcaagctatcaaggcatatacaagcagttagttgaaac 629

              
Query: 643 act 645
           |||
Sbjct: 630 act 632



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gacccgcagattgtaaatggggaagatttccctcctatgaacgaccttattcgactatac 288
           |||||| || |||| || ||||||||||| ||||| ||||| ||||| ||||  ||||||
Sbjct: 217 gacccgaaggttgtcaacggggaagattttcctcccatgaaggacctaattcagctatac 276

                         
Query: 289 aagaaagcctttct 302
           | || ||| |||||
Sbjct: 277 aggacagcttttct 290
to top
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
             complete sequence
          Length = 144811

 Score =  224 bits (113), Expect = 3e-55
 Identities = 345/421 (81%), Gaps = 1/421 (0%)
 Strand = Plus / Minus

                                                                         
Query: 234   gcagattgtaaatggggaagatttccctcctatgaacgaccttattcgactatacaagaa 293
             |||| |||| ||||||||||||||||| |||||||| |||||  |||| |||||||||||
Sbjct: 36545 gcaggttgttaatggggaagatttcccccctatgaaggacctacttcgtctatacaagaa 36486

                                                                         
Query: 294   agcctttctggatggaaacgaagatgttgttagtgacatcgagaaggcaatcactagcat 353
             ||| ||||| |||||||| || || | | || |||  || ||||  || |||| |  |||
Sbjct: 36485 agcttttctagatggaaatgatgaggctcttggtggaattgagagtgctatcattgccat 36426

                                                                         
Query: 354   ggaggaagagagaagtaaagcagcttctcagtttgacagtatcacagctgaaataacttc 413
              ||| |||| || |||||  ||||| |||||| ||| |||||  || | ||||| |||||
Sbjct: 36425 tgagaaagaaaggagtaactcagctgctcagtatgaaagtattgcaaccgaaattacttc 36366

                                                                         
Query: 414   agggaagaataagtttcttcgcttaaatgctgatctagagaatttccggaagcagactga 473
             ||||||| | ||||| || ||  ||||||||||||| |||||||||||||||||||||||
Sbjct: 36365 agggaaggacaagttcctccgtataaatgctgatctggagaatttccggaagcagactga 36306

                                                                         
Query: 474   aaaggaccgtgcaaagtttacatcgaatatacaagtggaacttgtacagagtctgttacc 533
             |||||| ||||| | |||||| || |||||||| |||||  |||| |||||||| ||  |
Sbjct: 36305 aaaggagcgtgctaggtttacctcaaatatacaggtggatgttgttcagagtctattgac 36246

                                                                         
Query: 534   ttctggttgatagcttcgagaaaacaaatgtagaggtcacactagagactgagaaagagc 593
              |||||||||||| || |||||    |||  |||| |||| |  |||||||| |||||||
Sbjct: 36245 -tctggttgatagttttgagaaggtgaatcaagagatcaccccggagactgataaagagc 36187

                                                                         
Query: 594   agaagattagcacaagctatcaaggcatatacaagcaattagtagaaacactgaaaagct 653
             ||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||| |||||
Sbjct: 36186 agacgattagcacaagctatcaaggcatatacaagcagttagtagagacattgagaagct 36127

              
Query: 654   t 654
             |
Sbjct: 36126 t 36126



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 182   tccggcgccccaatgcagcgctgccgccgctccgcgtcgctggcgctgaccc 233
             |||||||| || |||| |||| |||||||||||| | ||| | |||||||||
Sbjct: 37385 tccggcgcacccatgccgcgccgccgccgctccgtgccgccgccgctgaccc 37334
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  224 bits (113), Expect = 3e-55
 Identities = 345/421 (81%), Gaps = 1/421 (0%)
 Strand = Plus / Minus

                                                                            
Query: 234      gcagattgtaaatggggaagatttccctcctatgaacgaccttattcgactatacaagaa 293
                |||| |||| ||||||||||||||||| |||||||| |||||  |||| |||||||||||
Sbjct: 21386795 gcaggttgttaatggggaagatttcccccctatgaaggacctacttcgtctatacaagaa 21386736

                                                                            
Query: 294      agcctttctggatggaaacgaagatgttgttagtgacatcgagaaggcaatcactagcat 353
                ||| ||||| |||||||| || || | | || |||  || ||||  || |||| |  |||
Sbjct: 21386735 agcttttctagatggaaatgatgaggctcttggtggaattgagagtgctatcattgccat 21386676

                                                                            
Query: 354      ggaggaagagagaagtaaagcagcttctcagtttgacagtatcacagctgaaataacttc 413
                 ||| |||| || |||||  ||||| |||||| ||| |||||  || | ||||| |||||
Sbjct: 21386675 tgagaaagaaaggagtaactcagctgctcagtatgaaagtattgcaaccgaaattacttc 21386616

                                                                            
Query: 414      agggaagaataagtttcttcgcttaaatgctgatctagagaatttccggaagcagactga 473
                ||||||| | ||||| || ||  ||||||||||||| |||||||||||||||||||||||
Sbjct: 21386615 agggaaggacaagttcctccgtataaatgctgatctggagaatttccggaagcagactga 21386556

                                                                            
Query: 474      aaaggaccgtgcaaagtttacatcgaatatacaagtggaacttgtacagagtctgttacc 533
                |||||| ||||| | |||||| || |||||||| |||||  |||| |||||||| ||  |
Sbjct: 21386555 aaaggagcgtgctaggtttacctcaaatatacaggtggatgttgttcagagtctattgac 21386496

                                                                            
Query: 534      ttctggttgatagcttcgagaaaacaaatgtagaggtcacactagagactgagaaagagc 593
                 |||||||||||| || |||||    |||  |||| |||| |  |||||||| |||||||
Sbjct: 21386495 -tctggttgatagttttgagaaggtgaatcaagagatcaccccggagactgataaagagc 21386437

                                                                            
Query: 594      agaagattagcacaagctatcaaggcatatacaagcaattagtagaaacactgaaaagct 653
                ||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||| |||||
Sbjct: 21386436 agacgattagcacaagctatcaaggcatatacaagcagttagtagagacattgagaagct 21386377

                 
Query: 654      t 654
                |
Sbjct: 21386376 t 21386376



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 182      tccggcgccccaatgcagcgctgccgccgctccgcgtcgctggcgctgaccc 233
                |||||||| || |||| |||| |||||||||||| | ||| | |||||||||
Sbjct: 21387635 tccggcgcacccatgccgcgccgccgccgctccgtgccgccgccgctgaccc 21387584
to top
>gb|BC072660.1| Mus musculus solute carrier family 25 (mitochondrial carrier;
           phosphate carrier), member 23, mRNA (cDNA clone
           MGC:100028 IMAGE:30360302), complete cds
          Length = 3379

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 197 cagcgctgccgccgctccgcgtcgct 222
           ||||||||||||||||||||||||||
Sbjct: 227 cagcgctgccgccgctccgcgtcgct 202
to top
>ref|NM_025877.3| Mus musculus solute carrier family 25 (mitochondrial carrier;
           phosphate carrier), member 23 (Slc25a23), mRNA
          Length = 3384

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 197 cagcgctgccgccgctccgcgtcgct 222
           ||||||||||||||||||||||||||
Sbjct: 231 cagcgctgccgccgctccgcgtcgct 206
to top
>emb|CT571247.13| Mouse DNA sequence from clone RP24-116C19 on chromosome 17, complete
             sequence
          Length = 137161

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 197   cagcgctgccgccgctccgcgtcgct 222
             ||||||||||||||||||||||||||
Sbjct: 77999 cagcgctgccgccgctccgcgtcgct 78024
to top
>ref|NM_024103.2| Homo sapiens solute carrier family 25 (mitochondrial carrier;
           phosphate carrier), member 23 (SLC25A23), mRNA
          Length = 3475

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 183 cagcgctgccgccgctccgcgtcgc 159
to top
>ref|XM_542138.2| PREDICTED: Canis familiaris similar to solute carrier family 25
           (mitochondrial carrier; phosphate carrier), member 23,
           transcript variant 1 (LOC485020), mRNA
          Length = 1508

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 142 cagcgctgccgccgctccgcgtcgc 118
to top
>ref|XM_863299.1| PREDICTED: Canis familiaris similar to solute carrier family 25
           (mitochondrial carrier; phosphate carrier), member 23,
           transcript variant 3 (LOC485020), mRNA
          Length = 1562

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 142 cagcgctgccgccgctccgcgtcgc 118
to top
>ref|XM_863292.1| PREDICTED: Canis familiaris similar to solute carrier family 25
           (mitochondrial carrier; phosphate carrier), member 23,
           transcript variant 2 (LOC485020), mRNA
          Length = 1349

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 142 cagcgctgccgccgctccgcgtcgc 118
to top
>gb|BC001656.1| Homo sapiens solute carrier family 25 (mitochondrial carrier;
           phosphate carrier), member 23, mRNA (cDNA clone MGC:2615
           IMAGE:3356718), complete cds
          Length = 2089

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 164 cagcgctgccgccgctccgcgtcgc 140
to top
>emb|AJ619988.1| Homo sapiens mRNA for small calcium-binding mitochondrial carrier 3
           (SCAMC-3 gene)
          Length = 1594

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 148 cagcgctgccgccgctccgcgtcgc 124
to top
>emb|AJ619962.1| Homo sapiens partial mRNA for mitochondrial ATP-Mg/Pi carrier
           isoform 2, (SLC25A23 gene)
          Length = 3430

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 138 cagcgctgccgccgctccgcgtcgc 114
to top
>emb|AJ512835.1|HSA512835 Homo sapiens mRNA for putative calcium binding transporter (ORF1)
          Length = 1430

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 148 cagcgctgccgccgctccgcgtcgc 124
to top
>gb|AC010503.8| Homo sapiens chromosome 19 clone CTD-2396E7, complete sequence
          Length = 141295

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 197   cagcgctgccgccgctccgcgtcgc 221
             |||||||||||||||||||||||||
Sbjct: 23278 cagcgctgccgccgctccgcgtcgc 23302
to top
>ref|XM_217310.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310067G05
           (LOC301113), mRNA
          Length = 1451

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 65  cagcgctgccgccgctccgcgtcgc 41
to top
>emb|AJ324213.1|HSA324213 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-XI24C
          Length = 635

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 148 cagcgctgccgccgctccgcgtcgc 124
to top
>gb|AY750170.1| Homo sapiens mitochondrial Ca2+-dependent solute carrier protein 2
           (SLC25A23) mRNA, complete cds; nuclear gene for
           mitochondrial product
          Length = 3425

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 197 cagcgctgccgccgctccgcgtcgc 221
           |||||||||||||||||||||||||
Sbjct: 148 cagcgctgccgccgctccgcgtcgc 124
to top
>ref|XM_539776.2| PREDICTED: Canis familiaris similar to dachsous 2 isoform 1
            (LOC482659), mRNA
          Length = 6969

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 212  tccgcgtcgctggcgctgacccgcag 237
            ||||||||| ||||||||||||||||
Sbjct: 1631 tccgcgtcggtggcgctgacccgcag 1606
to top
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence
          Length = 210979

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 358   gaagagagaagtaaagcagct 378
             |||||||||||||||||||||
Sbjct: 83024 gaagagagaagtaaagcagct 83004
to top
>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence
          Length = 130895

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 633    tagtagaaacactgaaaagct 653
              |||||||||||||||||||||
Sbjct: 101641 tagtagaaacactgaaaagct 101661
to top
>emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chromosome 13 Contains the
              3' end of the DIAPH3 gene for diaphanous homolog 3
              (Drosophila), complete sequence
          Length = 154212

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 405    aataacttcagggaagaataa 425
              |||||||||||||||||||||
Sbjct: 114477 aataacttcagggaagaataa 114457
to top
>emb|AL732327.6| Human DNA sequence from clone RP11-387P24 on chromosome X Contains part
             of the SH3KBP1 gene for SH3-domain kinase binding protein
             1 (CIN85), complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   ctgaaataacttcagggaagaata 424
             ||||||||||||||||| ||||||
Sbjct: 44285 ctgaaataacttcaggggagaata 44308
to top
>emb|AL451080.11| Human DNA sequence from clone RP11-323B13 on chromosome 6 Contains the
             3' end of a novel gene (FLJ20342), complete sequence
          Length = 56725

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgacccgcagattgtaaatg 247
             ||||||||||||||||||||
Sbjct: 27275 tgacccgcagattgtaaatg 27294
to top
>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete
              sequence
          Length = 252632

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 618    gcatatacaagcaattagta 637
              ||||||||||||||||||||
Sbjct: 141335 gcatatacaagcaattagta 141316
to top
>emb|AJ301654.1|ECH301654 Erwinia chrysanthemi ATPase operon (sufABCDSE genes)
          Length = 6866

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  cgcgtcgctggcgctgaccc 233
            ||||||||||||||||||||
Sbjct: 6615 cgcgtcgctggcgctgaccc 6634
to top
>gb|AC090009.9| Homo sapiens 12 BAC RP11-724J16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 53631

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   gaaataacttcagggaagaataag 426
             ||||||||||||||||| ||||||
Sbjct: 27377 gaaataacttcagggaaaaataag 27400
to top
>gb|AC093015.5| Homo sapiens 12q BAC RP11-534K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 115294

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   agagagaagtaaagcagctt 379
             ||||||||||||||||||||
Sbjct: 42158 agagagaagtaaagcagctt 42177
to top
>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168186

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 341   caatcactagcatggaggaagaga 364
             |||||||||||| |||||||||||
Sbjct: 42358 caatcactagcaaggaggaagaga 42335
to top
>gb|AC107965.4| Homo sapiens chromosome 8, clone CTD-2332A4, complete sequence
          Length = 112032

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   agagtctgttaccttctggt 540
             ||||||||||||||||||||
Sbjct: 86329 agagtctgttaccttctggt 86348
to top
>gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, complete sequence
          Length = 168539

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 521    agagtctgttaccttctggt 540
              ||||||||||||||||||||
Sbjct: 129206 agagtctgttaccttctggt 129187
to top
>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence
          Length = 202543

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 577    agagactgagaaagagcagaagattagcacaa 608
              ||||| |||||| |||||||||||||| ||||
Sbjct: 189324 agagaatgagaaggagcagaagattagaacaa 189293
to top
>gb|AC097455.3| Homo sapiens BAC clone RP11-2J13 from 4, complete sequence
          Length = 147327

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 554   aaaacaaatgtagaggtcacactagagactga 585
             |||||||||||||||||  || ||||||||||
Sbjct: 73708 aaaacaaatgtagaggtttcattagagactga 73739
to top
>gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, complete sequence
          Length = 195613

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gccaacccccgtccttcctc 177
             ||||||||||||||||||||
Sbjct: 92359 gccaacccccgtccttcctc 92378
to top
>gb|AC127518.8| Homo sapiens chromosome 17, clone RP13-629P20, complete sequence
          Length = 166080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gccaacccccgtccttcctc 177
             ||||||||||||||||||||
Sbjct: 82163 gccaacccccgtccttcctc 82182
to top
>emb|AL953894.5| Zebrafish DNA sequence from clone CH211-212B13 in linkage group 18,
              complete sequence
          Length = 222376

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 595    gaagattagcacaagctatcaagg 618
              ||||||||||||||||| ||||||
Sbjct: 157658 gaagattagcacaagctttcaagg 157635
to top
>emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chromosome 2, complete
             sequence
          Length = 103901

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 505   caagtggaacttgtacagagtctg 528
             ||||||||||||||| ||||||||
Sbjct: 49006 caagtggaacttgtaaagagtctg 48983


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,286,037
Number of Sequences: 3902068
Number of extensions: 5286037
Number of successful extensions: 105798
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105683
Number of HSP's gapped (non-prelim): 114
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top