Clone Name | basd2m21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to riboso... | 41 | 0.002 | 2 | TAR1_KLULA (Q6CQE5) Protein TAR1 | 41 | 0.002 | 3 | RBPSL_HUMAN (Q9UBG7) Recombining binding protein suppressor of h... | 30 | 4.7 |
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>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = -3 Query: 486 HGFTFYFTTHWGFFSPFPHGTTSLSVTQEYLALQG 382 + FT++FT FFS F H T SLSV+++YLAL G Sbjct: 25 NNFTYFFTLFSKFFSSFHHCTCSLSVSRQYLALDG 59
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = -3 Query: 486 HGFTFYFTTHWGFFSPFPHGTTSLSVTQEYLALQG 382 + FT++FT FFS F H T SLSV+++YLAL G Sbjct: 10 NNFTYFFTLFSKFFSSFHHCTCSLSVSRQYLALDG 44
>RBPSL_HUMAN (Q9UBG7) Recombining binding protein suppressor of hairless-like| protein (Transcription factor RBP-L) Length = 516 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -2 Query: 529 RSEITFPLPLLGSSARFHVLFHYPLGVLFTFPSRYYFAIGHPGV 398 R+ IT P+ L+ + F YP FT+ Y GHPGV Sbjct: 449 RAPITIPMSLVRADGLF-----YPSAFSFTYTPEYSVRPGHPGV 487 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,762,210 Number of Sequences: 219361 Number of extensions: 1643218 Number of successful extensions: 3453 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3362 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3453 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)