Clone Name | basd2k24 |
---|---|
Clone Library Name | barley_pub |
>HAP28_HUMAN (Q13442) 28 kDa heat- and acid-stable phosphoprotein| (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) Length = 181 Score = 65.5 bits (158), Expect = 6e-11 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 30/138 (21%) Frame = +3 Query: 36 LPRGGKRS-QKGRARQFTSVDELESQRKQEQNWRKKQXXXXXXXXXXXXX---------- 182 +P+GG++ KGRARQ+TS +E+++Q + E+ +++ Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60 Query: 183 -------------------XXXINNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAK 305 I NPNRV TKK +QLD +LSRRE+E+I K Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLD---LDGPKELSRREREEIEK 117 Query: 306 QEAQRRYQQLHAQGKTDE 359 Q+A+ RY ++H GKT++ Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>HAP28_RAT (Q62785) 28 kDa heat- and acid-stable phosphoprotein| (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) Length = 181 Score = 64.7 bits (156), Expect = 1e-10 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 30/138 (21%) Frame = +3 Query: 36 LPRGGKRS-QKGRARQFTSVDELESQ---RKQEQNWRKKQXXXXXXXXXX---------- 173 +P+GG++ KGR RQ+TS +E+++Q KQ+ N +Q Sbjct: 1 MPKGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPKKEKKSLDS 60 Query: 174 ----------------XXXXXXINNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAK 305 I NPNRV TKK +QLD +LSRRE+E+I K Sbjct: 61 DESEDEDDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLD---LDGPKELSRREREEIEK 117 Query: 306 QEAQRRYQQLHAQGKTDE 359 Q+A+ RY ++H GKT++ Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>HAP28_MOUSE (Q3UHX2) 28 kDa heat- and acid-stable phosphoprotein| (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) Length = 181 Score = 64.7 bits (156), Expect = 1e-10 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 30/138 (21%) Frame = +3 Query: 36 LPRGGKRS-QKGRARQFTSVDELESQ---RKQEQNWRKKQXXXXXXXXXX---------- 173 +P+GG++ KGR RQ+TS +E+++Q KQ+ N +Q Sbjct: 1 MPKGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPKKEKKSLDS 60 Query: 174 ----------------XXXXXXINNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAK 305 I NPNRV TKK +QLD +LSRRE+E+I K Sbjct: 61 DESEDEDDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLD---LDGPKELSRREREEIEK 117 Query: 306 QEAQRRYQQLHAQGKTDE 359 Q+A+ RY ++H GKT++ Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 265 PLIYHEEKKNKLQNRRRKEDTNNFMPKVKQMK 360 P H+EK QNR K DTNN P++ +++ Sbjct: 1264 PQNQHQEKDQHEQNRNGKSDTNNSGPEINKIR 1295
>SPC97_DICDI (Q95ZG3) Spindle pole body component 97 (Spc97) (DdSpc97)| Length = 1177 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 195 NNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAKQEAQRRYQQLHAQ 344 NNPN NKT +S V+ P +++Q +Q+ Q++ QQ Q Sbjct: 978 NNPNLFKNKTSSSSNKSNNVSPPLEPRFSYQQQQQQQQQQQQQQQQQQQQ 1027
>TRHY_SHEEP (P22793) Trichohyalin| Length = 1549 Score = 29.3 bits (64), Expect = 4.9 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 14/94 (14%) Frame = +3 Query: 93 DELESQRKQEQNWRKKQXXXXXXXXXXXXXXXXINNPNRVINKTKKASQL---------- 242 DE E +R++EQ WR +Q R K ++ QL Sbjct: 898 DEQEEKREREQEWRSRQKRDSQFPAEQLLEREQQKETERRDRKFREEEQLLKGQREEKIR 957 Query: 243 ----DEIVTTPTTDLSRREKEQIAKQEAQRRYQQ 332 D L R E+EQ +QE R++++ Sbjct: 958 YLEEDRKFREEEQQLRRLEREQQLRQERDRKFRE 991
>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog| Length = 772 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +1 Query: 247 KLLPRLPLIYHEEKKNKLQNRRRKEDTNNFMPKVKQMKQEQ 369 K L + + + EEK+ K +N+R +ED + KVKQ++ E+ Sbjct: 236 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLER 276
>CS029_HUMAN (Q8WUQ7) Protein C19orf29 (NY-REN-24 antigen)| Length = 690 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +1 Query: 247 KLLPRLPLIYHEEKKNKLQNRRRKEDTNNFMPKVKQMKQEQ 369 K L + + + EEK+ K +N+R +ED + KVKQ++ E+ Sbjct: 146 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLER 186
>CHB_SERMA (Q54468) Chitobiase precursor (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 885 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +3 Query: 228 KASQLDEIVTTPTTDLSRREKEQIAKQEAQRRYQQLHAQGKTDE 359 K +Q +I P D+ + + EA RY++LHA GK E Sbjct: 434 KYAQARQIEVIPEIDMPAHARAAVVSMEA--RYKKLHAAGKEQE 475 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,828,520 Number of Sequences: 219361 Number of extensions: 654694 Number of successful extensions: 2479 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2350 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2466 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)