>HAP28_HUMAN (Q13442) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 30/138 (21%)
 Frame = +3

Query: 36  LPRGGKRS-QKGRARQFTSVDELESQRKQEQNWRKKQXXXXXXXXXXXXX---------- 182
           +P+GG++   KGRARQ+TS +E+++Q + E+   +++                       
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 183 -------------------XXXINNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAK 305
                                 I NPNRV   TKK +QLD        +LSRRE+E+I K
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLD---LDGPKELSRREREEIEK 117

Query: 306 QEAQRRYQQLHAQGKTDE 359
           Q+A+ RY ++H  GKT++
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135

>HAP28_RAT (Q62785) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 30/138 (21%)
 Frame = +3

Query: 36  LPRGGKRS-QKGRARQFTSVDELESQ---RKQEQNWRKKQXXXXXXXXXX---------- 173
           +P+GG++   KGR RQ+TS +E+++Q    KQ+ N   +Q                    
Sbjct: 1   MPKGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPKKEKKSLDS 60

Query: 174 ----------------XXXXXXINNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAK 305
                                 I NPNRV   TKK +QLD        +LSRRE+E+I K
Sbjct: 61  DESEDEDDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLD---LDGPKELSRREREEIEK 117

Query: 306 QEAQRRYQQLHAQGKTDE 359
           Q+A+ RY ++H  GKT++
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135

>HAP28_MOUSE (Q3UHX2) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 30/138 (21%)
 Frame = +3

Query: 36  LPRGGKRS-QKGRARQFTSVDELESQ---RKQEQNWRKKQXXXXXXXXXX---------- 173
           +P+GG++   KGR RQ+TS +E+++Q    KQ+ N   +Q                    
Sbjct: 1   MPKGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPKKEKKSLDS 60

Query: 174 ----------------XXXXXXINNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAK 305
                                 I NPNRV   TKK +QLD        +LSRRE+E+I K
Sbjct: 61  DESEDEDDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLD---LDGPKELSRREREEIEK 117

Query: 306 QEAQRRYQQLHAQGKTDE 359
           Q+A+ RY ++H  GKT++
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135

>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)|
          Length = 1942

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 265  PLIYHEEKKNKLQNRRRKEDTNNFMPKVKQMK 360
            P   H+EK    QNR  K DTNN  P++ +++
Sbjct: 1264 PQNQHQEKDQHEQNRNGKSDTNNSGPEINKIR 1295

>SPC97_DICDI (Q95ZG3) Spindle pole body component 97 (Spc97) (DdSpc97)|
          Length = 1177

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 195  NNPNRVINKTKKASQLDEIVTTPTTDLSRREKEQIAKQEAQRRYQQLHAQ 344
            NNPN   NKT  +S     V+ P       +++Q  +Q+ Q++ QQ   Q
Sbjct: 978  NNPNLFKNKTSSSSNKSNNVSPPLEPRFSYQQQQQQQQQQQQQQQQQQQQ 1027

>TRHY_SHEEP (P22793) Trichohyalin|
          Length = 1549

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 14/94 (14%)
 Frame = +3

Query: 93   DELESQRKQEQNWRKKQXXXXXXXXXXXXXXXXINNPNRVINKTKKASQL---------- 242
            DE E +R++EQ WR +Q                     R   K ++  QL          
Sbjct: 898  DEQEEKREREQEWRSRQKRDSQFPAEQLLEREQQKETERRDRKFREEEQLLKGQREEKIR 957

Query: 243  ----DEIVTTPTTDLSRREKEQIAKQEAQRRYQQ 332
                D         L R E+EQ  +QE  R++++
Sbjct: 958  YLEEDRKFREEEQQLRRLEREQQLRQERDRKFRE 991

>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog|
          Length = 772

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +1

Query: 247 KLLPRLPLIYHEEKKNKLQNRRRKEDTNNFMPKVKQMKQEQ 369
           K L +  + + EEK+ K +N+R +ED    + KVKQ++ E+
Sbjct: 236 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLER 276

>CS029_HUMAN (Q8WUQ7) Protein C19orf29 (NY-REN-24 antigen)|
          Length = 690

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +1

Query: 247 KLLPRLPLIYHEEKKNKLQNRRRKEDTNNFMPKVKQMKQEQ 369
           K L +  + + EEK+ K +N+R +ED    + KVKQ++ E+
Sbjct: 146 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLER 186

>CHB_SERMA (Q54468) Chitobiase precursor (EC 3.2.1.52)|
           (N-acetyl-beta-glucosaminidase)
           (Beta-N-acetylhexosaminidase)
          Length = 885

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 228 KASQLDEIVTTPTTDLSRREKEQIAKQEAQRRYQQLHAQGKTDE 359
           K +Q  +I   P  D+    +  +   EA  RY++LHA GK  E
Sbjct: 434 KYAQARQIEVIPEIDMPAHARAAVVSMEA--RYKKLHAAGKEQE 475


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,828,520
Number of Sequences: 219361
Number of extensions: 654694
Number of successful extensions: 2479
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2466
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)