Clone Name | basd2n06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ref|XM_754008.1| Ustilago maydis 521 hypothetical protein (UM029... | 38 | 1.9 | 2 | gb|AY841792.1| Triticum aestivum cysteine protease (CP) mRNA, co... | 36 | 7.5 | 3 | gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... | 36 | 7.5 | 4 | gb|AF034211.1| Desulfovibrio vulgaris vulgaris insertion sequenc... | 36 | 7.5 |
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>ref|XM_754008.1| Ustilago maydis 521 hypothetical protein (UM02954.1) partial mRNA Length = 5052 Score = 38.2 bits (19), Expect = 1.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 gtggaaggccaagttcggg 31 ||||||||||||||||||| Sbjct: 169 gtggaaggccaagttcggg 151
>gb|AY841792.1| Triticum aestivum cysteine protease (CP) mRNA, complete cds Length = 1525 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 25 gttcgggaagacctacag 42 |||||||||||||||||| Sbjct: 270 gttcgggaagacctacag 287
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 gtggaaggccaagttcgg 30 |||||||||||||||||| Sbjct: 2090111 gtggaaggccaagttcgg 2090094 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 gtggaaggccaagttcgg 30 |||||||||||||||||| Sbjct: 628507 gtggaaggccaagttcgg 628524
>gb|AF034211.1| Desulfovibrio vulgaris vulgaris insertion sequence ISD1 transposase gene, complete cds Length = 1208 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 gtggaaggccaagttcgg 30 |||||||||||||||||| Sbjct: 196 gtggaaggccaagttcgg 213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 166,675 Number of Sequences: 3902068 Number of extensions: 166675 Number of successful extensions: 47359 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47323 Number of HSP's gapped (non-prelim): 36 length of query: 54 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 34 effective length of database: 17,155,003,908 effective search space: 583270132872 effective search space used: 583270132872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)