>CI085_RAT (Q68FU5) Protein C9orf85 homolog|
          Length = 155

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 41/112 (36%), Positives = 67/112 (59%)
 Frame = +3

Query: 57  RTGPPKHQNSYAWKPNLGRKINETEPGGRFRPLSEITGVCQRCRDQIDWKRKYGKYKPIV 236
           R+ P KHQN++ +K +   K  +T+            GVCQRC++ ++W+ KY KYKP+ 
Sbjct: 10  RSRPQKHQNTFTFKNDKFDKSVQTKKINA----KLHDGVCQRCKEVLEWRVKYSKYKPLS 65

Query: 237 EPAKCQKCSKRNVRQAYHNVCTGCSKELGICAKCCTSVKQLVGRDAEEEDSE 392
           +P KC KC ++ V+ +YH +C  C+ +L +CAKC    + ++  + E E SE
Sbjct: 66  KPKKCVKCLQKTVKDSYHIMCRPCACKLEVCAKCGKEEEIVIPFNKEPEPSE 117

>CI085_HUMAN (Q96MD7) Protein C9orf85|
          Length = 179

 Score = 85.9 bits (211), Expect = 8e-17
 Identities = 38/94 (40%), Positives = 60/94 (63%)
 Frame = +3

Query: 57  RTGPPKHQNSYAWKPNLGRKINETEPGGRFRPLSEITGVCQRCRDQIDWKRKYGKYKPIV 236
           R+ P KHQN++++K +   K  +T+            GVCQRC++ ++W+ KY KYKP+ 
Sbjct: 10  RSRPQKHQNTFSFKNDKFDKSVQTKKINA----KLHDGVCQRCKEVLEWRVKYSKYKPLS 65

Query: 237 EPAKCQKCSKRNVRQAYHNVCTGCSKELGICAKC 338
           +P KC KC ++ V+ +YH +C  C+ EL +CAKC
Sbjct: 66  KPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKC 99

>CI085_MOUSE (Q9CQ90) Protein C9orf85 homolog|
          Length = 155

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 38/94 (40%), Positives = 59/94 (62%)
 Frame = +3

Query: 57  RTGPPKHQNSYAWKPNLGRKINETEPGGRFRPLSEITGVCQRCRDQIDWKRKYGKYKPIV 236
           R+ P KHQN++ +K +   K  +T+            GVCQRC++ ++W+ KY KYKP+ 
Sbjct: 10  RSRPQKHQNTFTFKNDKFDKSVQTKKINA----KLHDGVCQRCKEVLEWRVKYSKYKPLS 65

Query: 237 EPAKCQKCSKRNVRQAYHNVCTGCSKELGICAKC 338
           +P KC KC ++ V+ +YH +C  C+ EL +CAKC
Sbjct: 66  KPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKC 99

>HEMO_PIG (P50828) Hemopexin precursor (Hyaluronidase) (EC 3.2.1.35)|
          Length = 459

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -2

Query: 253 WHFAGSTIGLYLPYLRFQ--SIWSRQRWQTPVISDRGRNLPPGSVSLIFR 110
           W F  ST+  +   L F+  S+W+ Q W   +IS+R +N  P SV   FR
Sbjct: 56  WGFDASTLDEHGAMLFFKGPSVWAGQNWTRGLISERWKN-APSSVDAAFR 104

>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24|
          Length = 229

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
 Frame = +3

Query: 93  WKPNLGRKINETEPGGRFRPLSEITGVCQRCRDQIDWKRKYGKYKPIVEPAK---CQKCS 263
           WK N   K++ET+     + L EI   C  C      K++Y    P+V       C  C 
Sbjct: 144 WKLNTDWKVDETQEKEVLKELEEIPFRCFLC------KKEY--TSPVVTKCNHYFCSSCF 195

Query: 264 KRNVRQAYHNVCTGCSKELGICAKCCTSVKQLV 362
            + ++ + +  C  C KE    AK  T +++L+
Sbjct: 196 MKQMKVSTN--CPICGKETEGAAKMATKLRKLL 226

>LIP_STAEQ (Q5HKP6) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase)|
          Length = 688

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/118 (19%), Positives = 48/118 (40%)
 Frame = +3

Query: 171 VCQRCRDQIDWKRKYGKYKPIVEPAKCQKCSKRNVRQAYHNVCTGCSKELGICAKCCTSV 350
           V ++ ++   + +K+ + KP  E  + +K +  N  Q  H+     ++++       T  
Sbjct: 112 VVEQNKENEAFVKKHSEEKPQQEQVELEKHASEN-NQTLHSKAAQSNEDVK------TKP 164

Query: 351 KQLVGRDAEEEDSERKXXXXXXXXXXXXXXXXXXXXMNKNKDEESGPSVPKIADRDRE 524
            QL    A++EDS+++                     N++KD +S   V K    D +
Sbjct: 165 SQLDNTTAQQEDSQKENLSKQDTQSSKTTDLLRATGQNQSKDSQSTEEVNKEVKNDTQ 222

>ETV3_MOUSE (Q8R4Z4) ETS translocation variant 3 (ETS-domain transcriptional|
           repressor PE1) (PE-1) (Mitogenic Ets transcriptional
           suppressor)
          Length = 513

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
 Frame = +2

Query: 50  VEANWSPEAPEQLRMEAQPRP---------EDQRDRTRGQVPASVGDHRRLPALPGPNRL 202
           ++    PE P Q  ++ QP P         E + +  RG VPAS     R+   P   + 
Sbjct: 330 LQCQMHPEEPSQFSIKLQPPPAGRKNRERVESREEAVRGSVPASAPVPSRIKVEPATEKD 389

Query: 203 EAQIRQ 220
              +RQ
Sbjct: 390 PDSLRQ 395

>TRX_DROME (P20659) Protein trithorax|
          Length = 3726

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
 Frame = +3

Query: 246  KCQKCSKRNVRQAYHNVCTGCSKEL------GICAKC-------CTSVKQLVG 365
            KCQKC K      YH+ C G SK L       IC  C        T V + VG
Sbjct: 1359 KCQKCQKN-----YHSTCLGTSKRLLGADRPLICVNCLKCKSCSTTKVSKFVG 1406

>STB4_YEAST (P50104) Probable transcriptional regulatory protein STB4|
          Length = 949

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 141 RFRPLSEITGVCQRCRDQIDWKRKYGKYKPIVEPAKCQKCSKRNVRQAYHNVCTGCSKEL 320
           RFR ++ I              ++ GK +  V+ A C+ C KR V+   +N C  CSK  
Sbjct: 52  RFREMTAIGNTDDALDTSTAASKENGKGRLRVQKA-CELCKKRKVKCDGNNPCLNCSKHQ 110

Query: 321 GIC 329
             C
Sbjct: 111 KEC 113

>TRX_DROVI (Q24742) Protein trithorax|
          Length = 3828

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
 Frame = +3

Query: 246  KCQKCSKRNVRQAYHNVCTGCSKEL------GICAKC-------CTSVKQLVG 365
            KCQKC K      YH+ C G SK L       IC  C        T V + VG
Sbjct: 1346 KCQKCQKN-----YHSTCLGTSKRLLGADRPLICVNCLKCKSCATTKVSKFVG 1393

>VAL2_TYLCA (P36280) AL2 protein (C2 protein)|
          Length = 135

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 65  SPEAPEQLRMEAQPRPEDQRDRTRGQVPASVGDHRRLPAL 184
           +P+AP QL    QPR     D  + Q   S+GD + LP L
Sbjct: 83  APQAPVQL----QPRHHSSPDTVQSQPEESIGDTQMLPGL 118

>CATL_BRUPA (O17473) Cathepsin L-like precursor (EC 3.4.22.15)|
          Length = 395

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 177 QRCRDQIDWKRKYGKYKPIVEPAKCQKC---SKRNVRQAYHNVCTG 305
           +R  DQ+DW+ K G   P+    +C  C   +     +AYH   TG
Sbjct: 180 ERLPDQVDWRTK-GAVTPVRNQGECGSCYAFATAAALEAYHKQMTG 224

>REC8L_HUMAN (O95072) Meiotic recombination protein REC8-like 1 (Cohesin Rec8p)|
          Length = 547

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 24/114 (21%)
 Frame = +2

Query: 62  WSPEA-------PEQLRMEAQPRPEDQRDRTRGQVPASVGDHRRLPAL-------PGPNR 199
           W P A       PE+LR+ A P PE      R  VP      RR   L         P +
Sbjct: 264 WEPGALLMEVTPPEELRLPAPPSPE-----RRPPVPPPPRRRRRRRLLFWDKETQISPEK 318

Query: 200 LEAQIRQVQADCRACKMPEVQ*TKRPAGVPQRLYRL----------LQGAWDLC 331
            + Q+ Q +A C  C  P VQ  +R    P  L+R           L G W  C
Sbjct: 319 FQEQL-QTRAHCWEC--PMVQPPERTIRGPAELFRTPTLSGWLPPELLGLWTHC 369

>AT2B4_HUMAN (P23634) Plasma membrane calcium-transporting ATPase 4 (EC 3.6.3.8)|
           (PMCA4) (Plasma membrane calcium pump isoform 4) (Plasma
           membrane calcium ATPase isoform 4)
          Length = 1241

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 83  QLRMEAQPRPEDQRDRTRGQVPASVGDHRRLPALPG 190
           +LR+ A+  P D+    +G + ++VG+HR++ A+ G
Sbjct: 749 KLRVLARSSPTDKHTLVKGIIDSTVGEHRQVVAVTG 784

>CRCB1_STRR6 (Q8DPG7) Protein crcB homolog 1|
          Length = 109

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 479 LILIFVHKANQCPSLPLPSISDGLL*CFALTVFFLSIPSNKL 354
           L+  F  + NQ   LPL ++   LL CF + VF+  + S ++
Sbjct: 15  LVRYFFSRYNQASKLPLGTLIANLLGCFLIGVFYNHVESKEV 56

>CRCB1_STRPN (Q97QC5) Protein crcB homolog 1|
          Length = 109

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 479 LILIFVHKANQCPSLPLPSISDGLL*CFALTVFFLSIPSNKL 354
           L+  F  + NQ   LPL ++   LL CF + VF+  + S ++
Sbjct: 15  LVRYFFSRYNQASKLPLGTLIANLLGCFLIGVFYNHVESKEV 56

>CNG19_ARATH (Q9LDR2) Putative cyclic nucleotide-gated ion channel 19 (Cyclic|
           nucleotide-binding transporter 2)
          Length = 729

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -2

Query: 583 PFCTACSAYSSRDA----TGKRSPSRSRSAIFG 497
           P+CT C +Y +R A    T + S SR R+ ++G
Sbjct: 106 PYCTTCPSYYNRQAAQLHTSRVSASRFRTVLYG 138

>SLT11_YARLI (Q6C3L4) Pre-mRNA-splicing factor SLT11|
          Length = 356

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
 Frame = +3

Query: 156 SEITGVCQRCRDQIDW----KRKYGKY-----KPIV----EPAKCQKCSKRNVRQAYHNV 296
           +E+  VC +C     +    K KYG       +P      +P + QK S R  +    NV
Sbjct: 16  TEVPAVCTQCLGANPYIRMTKEKYGAECKMCTRPFTVFRWQPERAQKGSSRG-KPLKTNV 74

Query: 297 CTGCSKELGICAKC 338
           C  CS++   C  C
Sbjct: 75  CLTCSRQKNCCQSC 88

>ZN330_DROME (Q9VAU9) Zinc finger protein 330 homolog (Nucleolar autoantigen 36|
           homolog)
          Length = 315

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 228 PIVEPAKCQKCSKRNVRQAYHNVCTGCSKELGICAKC 338
           P   P +C KC K+   +A+   C    + L ICA+C
Sbjct: 33  PCNAPMECDKCEKKQKSRAFCYFCQSIQR-LPICAQC 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,289,693
Number of Sequences: 219361
Number of extensions: 1880238
Number of successful extensions: 6412
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6405
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)