Clone Name | basd2l15 |
---|---|
Clone Library Name | barley_pub |
>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (CIRL-2) Length = 1487 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +1 Query: 145 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI 303 S ++ LLD E F +D LL PT + P D + + ++ EG + Sbjct: 634 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTDNIVLEVAVLSTEGQV 685
>HILS1_MOUSE (Q9QYL0) Spermatid-specific linker histone H1-like protein (TISP64)| Length = 170 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 14/87 (16%) Frame = +3 Query: 96 ISEGASATSYRQT---WR-----------GVRCHEQCLQGTPGCIC*IHFHIQ*SAPAPH 233 + + S T Y T WR G+ H C +G G +C + + + H Sbjct: 60 LKKAVSITGYNMTHNTWRFKRVLQNLLDKGMIMHVTCCKGASGSLCLCK---ERALKSNH 116 Query: 234 REQFCTGR*SR*KDKDHGDRRNNPCRL 314 R + C R K + G R + PC+L Sbjct: 117 RAKRCQDRQKSQKPQKPGQRESEPCQL 143
>DCS2_GOSAR (Q39760) (+)-delta-cadinene synthase isozyme XC14 (EC 4.2.3.13)| (D-cadinene synthase) Length = 554 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +1 Query: 70 FSTHIKTTPYLKELQRHLTVRLGEASDAMSNAYKALLDAFVE 195 ++T+ + PY K ++R + E + M +YKALLD + E Sbjct: 313 YATYEELIPYTKAIERWDIKCIDELPEYMKPSYKALLDVYEE 354
>LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (Latrophilin homolog 1) (Lectomedin-1) Length = 1459 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +1 Query: 145 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI 303 S ++ LLD E F +D LL PT + P + + + ++ EG I Sbjct: 630 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTENIVLEVAVLSTEGQI 681
>LPHN2_MOUSE (Q8JZZ7) Latrophilin-2 (Calcium-independent alpha-latrotoxin| receptor 2) (Fragment) Length = 891 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = +1 Query: 145 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI 303 S ++ LLD E F +D LL PT + P + + + ++ EG + Sbjct: 105 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTENIVLEVAVLSTEGQV 156
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/37 (32%), Positives = 15/37 (40%) Frame = +3 Query: 81 HQNHAISEGASATSYRQTWRGVRCHEQCLQGTPGCIC 191 H + S S W G +C + CL GT G C Sbjct: 270 HNEPCSPDTGSCESCEPGWNGTQCQQPCLPGTFGESC 306
>DCS4_GOSAR (O49853) (+)-delta-cadinene synthase isozyme C2 (EC 4.2.3.13)| (D-cadinene synthase) Length = 554 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 70 FSTHIKTTPYLKELQRHLTVRLGEASDAMSNAYKALLDAFVE 195 ++T+ + PY ++R + E + M +YKALLD + E Sbjct: 313 YATYEELIPYTNAIERWDIKCIDELPEYMKPSYKALLDVYKE 354
>DCS1_GOSHI (P93665) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene| synthase) Length = 554 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 70 FSTHIKTTPYLKELQRHLTVRLGEASDAMSNAYKALLDAFVE 195 ++T+ + PY ++R + E + M +YKALLD + E Sbjct: 313 YATYEELIPYTNAIERWDIKCIDELPEYMKPSYKALLDVYEE 354
>DCS1_GOSAR (Q39761) (+)-delta-cadinene synthase isozyme XC1 (EC 4.2.3.13)| (D-cadinene synthase) Length = 554 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 70 FSTHIKTTPYLKELQRHLTVRLGEASDAMSNAYKALLDAFVE 195 ++T+ + PY ++R + E + M +YKALLD + E Sbjct: 313 YATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEE 354
>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) Length = 1478 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = +1 Query: 145 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI 303 S ++ LLD E F +D L+ PT + P + + + ++ EG + Sbjct: 634 SSEQAHTATMLLDTLEEGAFVLADNLVEPTRVSM-PTENIVLEVAVLSTEGQV 685
>SNX23_HUMAN (Q96L93) Kinesin-like motor protein C20orf23 (Sorting nexin 23)| Length = 1317 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Frame = +1 Query: 67 RFSTHIKTTPYLKELQRHLTVRLGEASDAM-------SNAYKALLDAFVESTFTFSDQLL 225 R H K PY+++L +HL G+ + M + A + D S F+ + Sbjct: 173 RVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFT 232 Query: 226 RPTESNFAPVDEVGERIKIMEIEGTIPAD 312 + + P + V +I ++++ G+ AD Sbjct: 233 QAKFDSEMPCETV-SKIHLVDLAGSERAD 260
>Y964_METJA (Q58374) Hypothetical protein MJ0964| Length = 680 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = -2 Query: 225 QELITECESGFNKCIQECLVSIAHGI*RLSKSDGKMSLKLLQIWRGFDVR 76 ++L + S + I E + IA+GI RL+ + +L+++ + RG+D R Sbjct: 403 KDLAEKAISKLAEKIGESVEEIAYGIIRLANTTMAKALRIVTVERGYDPR 452
>PYC1_YEAST (P11154) Pyruvate carboxylase 1 (EC 6.4.1.1) (Pyruvic carboxylase 1)| (PCB 1) Length = 1178 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = +1 Query: 100 LKELQRHLTVRLGEASD---AMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGE 270 L++++ L R G+ + A N Y + + F + T+ D + PT S +P+ E E Sbjct: 978 LEKIREDLQNRFGDVDECDVASYNMYPRVYEDFQKMRETYGDLSVLPTRSFLSPL-ETDE 1036 Query: 271 RIKIMEIEG 297 I+++ +G Sbjct: 1037 EIEVVIEQG 1045 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,372,590 Number of Sequences: 219361 Number of extensions: 828684 Number of successful extensions: 2183 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2183 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)