ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| basd2i02 | 336 | AV922822 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 | 5 | -- | --- | - | -- | --- | - |
| basd2i01 | 598 | AV922821 | not_full | gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 | 46 | not_full | ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) Length = 364 | 15 | -- | --- | - | -- | --- | - |
| basd2h22 | 610 | AV922820 | not_full | emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in linkage group 16, complete sequence Length = 199783 | 15 | full | CU24_ARADI (P80516) Adult-specific rigid cuticular protein 12.4 (ACP 12.4) Length = 126 | 4 | -- | --- | - | -- | --- | - |
| basd2h21 | 458 | AV922819 | not_full | dbj|AB182641.1| Zea mays zcyb mRNA for cytochrome b561, complete cds Length = 958 | 78 | not_full | CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561) Length = 251 | 21 | -- | --- | - | -- | --- | - |
| basd2h20 | 491 | AV922818 | not_full | gb|AY626826.1| Oryza sativa (japonica cultivar-group) cell death-related protein (A2) mRNA, complete cds Length = 649 | 81 | not_full | YF69_SCHPO (O13929) Hypothetical protein C23C4.09c in chromosome I Length = 131 | 27 | -- | --- | - | -- | --- | - |
| basd2h19 | 605 | AV922817 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 7 | -- | --- | - | -- | --- | - |
| basd2h18 | 527 | AV922816 | not_full | dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B10, full insert sequence Length = 534 | 53 | not_full | ICAM2_HUMAN (P13598) Intercellular adhesion molecule 2 precursor (ICAM-2) (CD102 antigen) Length = 275 | 1 | -- | --- | - | -- | --- | - |
| basd2h17 | 622 | AV922815 | not_full | gb|AF498268.1| Haynaldia villosa clone kong28 mRNA Length = 1474 | 100 | not_full | IMDH_METJA (Q59011) Inosine-5NULL-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) Length = 496 | 9 | -- | --- | - | -- | --- | - |
| basd2h16 | 630 | AV922814 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 3 | -- | --- | - | -- | --- | - |
| basd2h15 | 549 | AV922813 | not_full | ref|XM_470194.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1869 | 28 | not_full | GSH1_NEUCR (Q8X0X0) Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) Length = 728 | 19 | -- | --- | - | -- | --- | - |
| basd2h14 | 413 | AV922812 | full | ref|NM_196818.1| Oryza sativa (japonica cultivar-group) putative glutamine synthetase (OSJNBa0018F16.4), mRNA Length = 2739 | 69 | full | FLUG_EMENI (P38094) Protein fluG Length = 865 | 13 | -- | --- | - | -- | --- | - |
| basd2h13 | 639 | AV922811 | not_full | gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 | 500 | not_full | HSP81_ORYSA (P33126) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) Length = 699 | 200 | -- | --- | - | -- | --- | - |
| basd2h12 | 606 | AV922810 | not_full | gb|AF498268.1| Haynaldia villosa clone kong28 mRNA Length = 1474 | 99 | not_full | Y922_METJA (Q58332) Hypothetical protein MJ0922 Length = 138 | 17 | -- | --- | - | -- | --- | - |
| basd2h11 | 604 | AV922809 | not_full | dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 | 500 | not_full | RK2_HORVU (P41096) Chloroplast 50S ribosomal protein L2 Length = 273 | 255 | -- | --- | - | -- | --- | - |
| basd2h09 | 484 | AV922808 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 107 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 52 | -- | --- | - | -- | --- | - |
| basd2h08 | 518 | AV922807 | full | gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 | 40 | full | THF1_ORYSA (Q84PB7) Protein THYLAKOID FORMATION1, chloroplast precursor Length = 287 | 24 | -- | --- | - | -- | --- | - |
| basd2h07 | 254 | AV922806 | not_full | gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 | 91 | full | SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein) Length = 115 | 22 | -- | --- | - | -- | --- | - |
| basd2h06 | 216 | AV922805 | not_full | emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 | 500 | not_full | NLT43_HORVU (Q42842) Nonspecific lipid-transfer protein 4.3 precursor (LTP 4.3) Length = 115 | 6 | -- | --- | - | -- | --- | - |
| basd2h04 | 620 | AV922804 | not_full | gb|AY109330.1| Zea mays CL45_1 mRNA sequence Length = 3772 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 500 | -- | --- | - | -- | --- | - |
| basd2h03 | 474 | AV922803 | not_full | dbj|AK066400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062O07, full insert sequence Length = 1416 | 44 | not_full | ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor Length = 253 | 65 | -- | --- | - | -- | --- | - |
| basd2h01 | 297 | AV922802 | not_full | gb|AC113320.7| Mus musculus chromosome 6, clone RP23-445E16, complete sequence Length = 267708 | 42 | not_full | PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25 Length = 672 | 2 | -- | --- | - | -- | --- | - |
| basd2g24 | 44 | AV836245 | not_full | gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 | 145 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2g21 | 580 | AV922801 | not_full | dbj|AB182641.1| Zea mays zcyb mRNA for cytochrome b561, complete cds Length = 958 | 90 | not_full | CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561) Length = 251 | 25 | -- | --- | - | -- | --- | - |
| basd2g20 | 495 | AV922800 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | GALT_CLOAB (Q97EZ4) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 497 | 1 | -- | --- | - | -- | --- | - |
| basd2g19 | 348 | AV922799 | not_full | gb|AY109236.1| Zea mays PCO143837 mRNA sequence Length = 665 | 36 | not_full | KNG_ANAMI (P83857) Kininogen [Contains: Bradykinin] (Fragments) Length = 188 | 5 | -- | --- | - | -- | --- | - |
| basd2g18 | 317 | AV922798 | not_full | ref|XM_466908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5781 | 11 | not_full | PPCKC_CHICK (P05153) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 | 5 | -- | --- | - | -- | --- | - |
| basd2g17 | 606 | AV922797 | not_full | dbj|AK099201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122P03, full insert sequence Length = 1292 | 122 | not_full | APX6_ORYSA (P0C0L1) Probable L-ascorbate peroxidase 6, chloroplast precursor (EC 1.11.1.11) Length = 309 | 71 | -- | --- | - | -- | --- | - |
| basd2g15 | 552 | AV922796 | not_full | ref|XM_470194.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1869 | 28 | not_full | KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated protein 4.12) (Ultrahigh sulfur keratin-associated protein 4.12) Length = 201 | 31 | -- | --- | - | -- | --- | - |
| basd2g14 | 476 | AV922795 | not_full | dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full insert sequence Length = 957 | 137 | not_full | Y5161_ARATH (Q9M015) Protein At5g01610 Length = 170 | 17 | -- | --- | - | -- | --- | - |
| basd2g13 | 343 | AV922794 | not_full | gb|AY103914.1| Zea mays PCO130298 mRNA sequence Length = 1127 | 70 | not_full | ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast precursor Length = 289 | 421 | -- | --- | - | -- | --- | - |
| basd2g10 | 488 | AV922793 | not_full | emb|X07841.1|TARDNAI Wheat rDNA 25S-18S intergenic region EcoRI-BamHI fragment Length = 4642 | 500 | not_full | ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa protein) Length = 201 | 5 | -- | --- | - | -- | --- | - |
| basd2g09 | 473 | AV922792 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 93 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 55 | -- | --- | - | -- | --- | - |
| basd2g08 | 573 | AV922791 | not_full | gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 | 31 | not_full | HIP2_ECTVA (P38524) High-potential iron-sulfur protein isozyme 2 (HiPIP 2) Length = 71 | 1 | -- | --- | - | -- | --- | - |
| basd2g07 | 310 | AV922790 | not_full | gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 | 120 | not_full | SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein) Length = 115 | 29 | -- | --- | - | -- | --- | - |
| basd2g06 | 640 | AV922789 | not_full | ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2g05 | 624 | AV922788 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 416 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 167 | -- | --- | - | -- | --- | - |
| basd2g04 | 563 | AV922787 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 180 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 75 | -- | --- | - | -- | --- | - |
| basd2g03 | 513 | AV922786 | not_full | gb|AY106071.1| Zea mays PCO141993 mRNA sequence Length = 1300 | 44 | not_full | GSHB_NITEU (Q82V16) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) (GSHase) Length = 320 | 11 | -- | --- | - | -- | --- | - |
| basd2g01 | 315 | AV922785 | not_full | gb|AC113320.7| Mus musculus chromosome 6, clone RP23-445E16, complete sequence Length = 267708 | 41 | not_full | PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25 Length = 672 | 2 | -- | --- | - | -- | --- | - |
| basd2f24 | 643 | AV922784 | not_full | dbj|AK102588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F09, full insert sequence Length = 2276 | 439 | not_full | MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 1 (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 667 | 42 | -- | --- | - | -- | --- | - |
| basd2f23 | 633 | AV922783 | not_full | gb|AY108613.1| Zea mays PCO091786 mRNA sequence Length = 597 | 500 | not_full | MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) Length = 1391 | 12 | -- | --- | - | -- | --- | - |
| basd2f22 | 624 | AV836244 | not_full | ref|XM_466822.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2247 | 84 | not_full | NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 | 500 | -- | --- | - | -- | --- | - |
| basd2f21 | 509 | AV836243 | full | ref|NM_194498.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0096E22.9), mRNA Length = 1110 | 52 | not_full | NMD3A_RAT (Q9R1M7) Glutamate [NMDA] receptor subunit 3A precursor (N-methyl-D-aspartate receptor subtype 3A) (NR3A) (NMDAR-L) (NMDAR-L1) (N-methyl-D-aspartate receptor) (Chi-1) Length = 1135 | 21 | -- | --- | - | -- | --- | - |
| basd2f19 | 312 | AV922782 | not_full | dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full insert sequence Length = 2183 | 36 | not_full | FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-) Length = 665 | 72 | -- | --- | - | -- | --- | - |
| basd2f17 | 37 | AV836242 | not_full | gb|AY726887.1| Uncultured gamma proteobacterium clone JL-ETNP-Y21 16S ribosomal RNA gene, partial sequence Length = 1230 | 1 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2f16 | 654 | AV922781 | not_full | gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 | 19 | not_full | BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1) (Brassinosteroid LRR receptor kinase) Length = 1207 | 132 | -- | --- | - | -- | --- | - |
| basd2f14 | 177 | AV922780 | not_full | gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 | 22 | not_full | CK5P1_ARATH (Q8H0V1) CDK5RAP1-like protein Length = 640 | 20 | -- | --- | - | -- | --- | - |
| basd2f13 | 339 | AV922779 | not_full | ref|NM_193473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 | 95 | not_full | CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) Length = 451 | 33 | -- | --- | - | -- | --- | - |
| basd2f12 | 193 | AV922778 | not_full | gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence Length = 188544 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2f11 | 491 | AV922777 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
