Clone Name | basd2h20 |
---|---|
Clone Library Name | barley_pub |
>gb|AY626826.1| Oryza sativa (japonica cultivar-group) cell death-related protein (A2) mRNA, complete cds Length = 649 Score = 428 bits (216), Expect = e-117 Identities = 333/372 (89%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||| ||| Sbjct: 78 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcatgg 137 Query: 178 tgcgccaagccaacaaaatgcagggcaacaaaaggcccaggaggaagcaaagcaggaagc 237 |||| ||| | |||||||| ||||||||||| || || || || |||||||||||||| Sbjct: 138 tgcggcaaatccgcaaaatgctgggcaacaaaaagctcaagaagatgcaaagcaggaagc 197 Query: 238 tgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagagagaggct 297 ||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 198 tgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagagaaaggct 257 Query: 298 ctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctgag 357 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctgag 317 Query: 358 agctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttct 417 |||||| || | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 318 agctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcacttct 377 Query: 418 ggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgcaa 477 |||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || | Sbjct: 378 ggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccggag 437 Query: 478 cgtccttgacga 489 |||||||||||| Sbjct: 438 cgtccttgacga 449
>dbj|AK122158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147B11, full insert sequence Length = 663 Score = 428 bits (216), Expect = e-117 Identities = 333/372 (89%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||| ||| Sbjct: 104 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcatgg 163 Query: 178 tgcgccaagccaacaaaatgcagggcaacaaaaggcccaggaggaagcaaagcaggaagc 237 |||| ||| | |||||||| ||||||||||| || || || || |||||||||||||| Sbjct: 164 tgcggcaaatccgcaaaatgctgggcaacaaaaagctcaagaagatgcaaagcaggaagc 223 Query: 238 tgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagagagaggct 297 ||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 224 tgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagagaaaggct 283 Query: 298 ctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctgag 357 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 284 ctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctgag 343 Query: 358 agctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttct 417 |||||| || | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 344 agctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcacttct 403 Query: 418 ggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgcaa 477 |||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || | Sbjct: 404 ggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccggag 463 Query: 478 cgtccttgacga 489 |||||||||||| Sbjct: 464 cgtccttgacga 475
>dbj|AK058330.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-C06, full insert sequence Length = 656 Score = 428 bits (216), Expect = e-117 Identities = 333/372 (89%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||| ||| Sbjct: 100 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcatgg 159 Query: 178 tgcgccaagccaacaaaatgcagggcaacaaaaggcccaggaggaagcaaagcaggaagc 237 |||| ||| | |||||||| ||||||||||| || || || || |||||||||||||| Sbjct: 160 tgcggcaaatccgcaaaatgctgggcaacaaaaagctcaagaagatgcaaagcaggaagc 219 Query: 238 tgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagagagaggct 297 ||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 220 tgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagagaaaggct 279 Query: 298 ctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctgag 357 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 280 ctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctgag 339 Query: 358 agctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttct 417 |||||| || | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 340 agctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcacttct 399 Query: 418 ggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgcaa 477 |||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || | Sbjct: 400 ggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccggag 459 Query: 478 cgtccttgacga 489 |||||||||||| Sbjct: 460 cgtccttgacga 471
>gb|AY327105.1| Oryza sativa (indica cultivar-group) apoptosis-related protein mRNA, complete cds Length = 416 Score = 424 bits (214), Expect = e-115 Identities = 334/374 (89%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 28 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcgtgg 87 Query: 178 tgcgccaagccaacaaaatgcagggcaacaaaaggcccaggaggaagcaaagcaggaagc 237 |||| ||| | ||||| | |||||||||||||| || || || |||||||||||||| Sbjct: 88 tgcggcaaatccgcaaaacactgggcaacaaaaggctcaagaagatgcaaagcaggaagc 147 Query: 238 tgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagagagaggct 297 ||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 148 tgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagagaaaggct 207 Query: 298 ctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctgag 357 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 208 ctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctgag 267 Query: 358 agctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttct 417 |||||| || | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 268 agctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcacttct 327 Query: 418 ggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgcaa 477 |||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || | Sbjct: 328 ggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccggag 387 Query: 478 cgtccttgacgacg 491 |||||||| ||||| Sbjct: 388 cgtccttggcgacg 401
>gb|AY105024.1| Zea mays PCO074515 mRNA sequence Length = 848 Score = 359 bits (181), Expect = 6e-96 Identities = 271/301 (90%) Strand = Plus / Plus Query: 191 caaaatgcagggcaacaaaaggcccaggaggaagcaaagcaggaagctgaggaacgcagg 250 |||||||| || ||||||||||| ||||| || || || |||||||||||||||||| || Sbjct: 203 caaaatgcgggccaacaaaaggctcaggaagacgcgaaacaggaagctgaggaacgccgg 262 Query: 251 cagatgatgcttgctcagatactgtcttctgaagctagagagaggctctcccgcatagct 310 ||||||||||||||||||||| | ||||||||||| ||||| ||||| |||||||||||| Sbjct: 263 cagatgatgcttgctcagatattatcttctgaagcaagagaaaggctttcccgcatagct 322 Query: 311 ttggtcaagcctgataaagcaagaggagtggaggatgttctgctgagagctgcacaaact 370 |||||||| ||||| ||||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 323 ttggtcaaacctgacaaagcaagaggggtggaggatgttttgctgagagctgctcaaact 382 Query: 371 ggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttctggagcaaatcaac 430 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| ||| Sbjct: 383 ggtggaatatctgagaaggtgtctgaagaaagacttatctcccttctagaacaaattaac 442 Query: 431 acccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgcaacgtccttgacgac 490 | |||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 443 agccacacaagcaagcaaaccaaagttacgattcagaggcgtcggaatgtccttgacgac 502 Query: 491 g 491 | Sbjct: 503 g 503 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagag 147 ||||||||||||||| || ||||||||||| Sbjct: 136 tgacccagagttggaagctatcaggcagag 165
>gb|AY749431.2| Oryza sativa (indica cultivar-group) truncated programmed cell death 5-b variant (PDCD5) mRNA, complete cds, alternatively spliced Length = 1354 Score = 252 bits (127), Expect = 9e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 297 tctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctga 356 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 1042 tctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctga 1101 Query: 357 gagctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttc 416 ||||||| || | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1102 gagctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcacttc 1161 Query: 417 tggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgca 476 ||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || | Sbjct: 1162 tggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccgga 1221 Query: 477 acgtccttgacgacg 491 |||||||| ||||| Sbjct: 1222 gcgtccttggcgacg 1236 Score = 93.7 bits (47), Expect = 5e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 48 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcgtgg 107 Query: 178 tgcgccaagccaacaaaatgcagggcaacaaaaggcccaggaggaagcaaagcag 232 |||| ||| | ||||| | |||||||||||||| || || || ||||||||| Sbjct: 108 tgcggcaaatccgcaaaacactgggcaacaaaaggctcaagaagatgcaaagcag 162 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| Sbjct: 275 ggaagctgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagaga 334 Query: 292 gaggc 296 |||| Sbjct: 335 aaggc 339
>gb|AY749430.2| Oryza sativa (indica cultivar-group) truncated programmed cell death 5-a variant (PDCD5) mRNA, complete cds, alternatively spliced Length = 1239 Score = 252 bits (127), Expect = 9e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 297 tctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctga 356 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 927 tctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctga 986 Query: 357 gagctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcacttc 416 ||||||| || | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 987 gagctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcacttc 1046 Query: 417 tggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgca 476 ||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || | Sbjct: 1047 tggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccgga 1106 Query: 477 acgtccttgacgacg 491 |||||||| ||||| Sbjct: 1107 gcgtccttggcgacg 1121 Score = 172 bits (87), Expect = 7e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 48 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcgtgg 107 Query: 178 tgcgccaagccaacaaaatgcagggcaacaaaaggcccaggaggaagcaaagcaggaagc 237 |||| ||| | ||||| | |||||||||||||| || || || |||||||||||||| Sbjct: 108 tgcggcaaatccgcaaaacactgggcaacaaaaggctcaagaagatgcaaagcaggaagc 167 Query: 238 tgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagagagaggc 296 ||||||||| |||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 168 tgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagagaaaggc 226
>ref|XM_475830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 228 Score = 246 bits (124), Expect = 6e-62 Identities = 178/196 (90%) Strand = Plus / Plus Query: 296 ctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctg 355 ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||| Sbjct: 25 ctctctcgcatagctttggtcaaacctgataaagcaagaggggtagaggatgttcttctg 84 Query: 356 agagctgcacaaactggtggaatatctgaaaaggtttctgaagaaaggcttatctcactt 415 |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 85 agagctgctcagtccggtggaatatctgaaaaggtgtctgaagaaaggcttatctcactt 144 Query: 416 ctggagcaaatcaacacccacacaagcaaacaaaccaaagtgacgattcagaggcgtcgc 475 |||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| || Sbjct: 145 ctggagcaaatcaatacccacactagcaaacagacgaaagttacgattcagaggcgccgg 204 Query: 476 aacgtccttgacgacg 491 | |||||||||||||| Sbjct: 205 agcgtccttgacgacg 220
>gb|AC152970.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0014E02, complete sequence Length = 33084 Score = 131 bits (66), Expect = 2e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 297 tctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctga 356 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 5092 tctcccgcatagctttggtcaaacctgataaagcaagaggggtggaggatgttcttctga 5033 Query: 357 gagctgcacaaactggtggaatatctgaaaaggt 390 ||||||| || | |||||||||||||||||||| Sbjct: 5032 gagctgctcagtccggtggaatatctgaaaaggt 4999 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 387 aggtttctgaagaaaggcttatctcacttctggagcaaatcaacacccacacaagcaaac 446 |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 4914 aggtgtctgaagaaaggcttatctcacttctggagcaaatcaatacccacactagcaaac 4855 Query: 447 aaaccaaagt 456 | || ||||| Sbjct: 4854 agacgaaagt 4845 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| Sbjct: 5881 ggaagctgaggaacggcggcagatgatgcttgctcagattttatcttctgaagctagaga 5822 Query: 292 gaggc 296 |||| Sbjct: 5821 aaggc 5817 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 118 tgacccagagttggaggccatcaggcagaggcgaatgcaagagataatgggacagcgtgg 177 ||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||| ||| Sbjct: 6196 tgacccagagttggaagctatcaggcagaggagaatgcaagagctaatggcacagcatgg 6137 Query: 178 tgcg 181 |||| Sbjct: 6136 tgcg 6133
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 115 bits (58), Expect = 1e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 297 tctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctga 356 |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| Sbjct: 70683 tctctcgcatagctttggtcaaacctgataaagcaagaggggtagaggatgttcttctga 70624 Query: 357 gagctgcacaaactggtggaatatctgaaaaggt 390 ||||||| || | |||||||||||||||||||| Sbjct: 70623 gagctgctcagtccggtggaatatctgaaaaggt 70590 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 387 aggtttctgaagaaaggcttatctcacttctggagcaaatcaacacccacacaagcaaac 446 |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 70492 aggtgtctgaagaaaggcttatctcacttctggagcaaatcaatacccacactagcaaac 70433 Query: 447 aaaccaaagt 456 | || ||||| Sbjct: 70432 agacgaaagt 70423 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 460 gattcagaggcgtcgcaacgtccttgacgacg 491 |||||||||||| || | |||||||||||||| Sbjct: 70147 gattcagaggcgccggagcgtccttgacgacg 70116
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 1e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 297 tctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgttctgctga 356 |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| Sbjct: 26918251 tctctcgcatagctttggtcaaacctgataaagcaagaggggtagaggatgttcttctga 26918192 Query: 357 gagctgcacaaactggtggaatatctgaaaaggt 390 ||||||| || | |||||||||||||||||||| Sbjct: 26918191 gagctgctcagtccggtggaatatctgaaaaggt 26918158 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 387 aggtttctgaagaaaggcttatctcacttctggagcaaatcaacacccacacaagcaaac 446 |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 26918060 aggtgtctgaagaaaggcttatctcacttctggagcaaatcaatacccacactagcaaac 26918001 Query: 447 aaaccaaagt 456 | || ||||| Sbjct: 26918000 agacgaaagt 26917991 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 460 gattcagaggcgtcgcaacgtccttgacgacg 491 |||||||||||| || | |||||||||||||| Sbjct: 26917715 gattcagaggcgccggagcgtccttgacgacg 26917684
>ref|NM_102725.2| Arabidopsis thaliana double-stranded DNA binding AT1G29850 transcript variant AT1G29850.1 mRNA, complete cds Length = 809 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||| ||||| ||||| ||||||||| ||| || |||||||| |||| |||| Sbjct: 232 ggaagctgatgaacgtaggcaaatgatgcttagtcaagtattgtcttctcaagcccgaga 291 Query: 292 gaggctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgtt 349 ||| | | || || ||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 292 gagaattgctcgaattgctctggtgaaacctgagaaagctagaggtgtggaggatgtt 349
>ref|NM_179397.1| Arabidopsis thaliana double-stranded DNA binding AT1G29850 transcript variant AT1G29850.2 mRNA, complete cds Length = 812 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||| ||||| ||||| ||||||||| ||| || |||||||| |||| |||| Sbjct: 235 ggaagctgatgaacgtaggcaaatgatgcttagtcaagtattgtcttctcaagcccgaga 294 Query: 292 gaggctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgtt 349 ||| | | || || ||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 295 gagaattgctcgaattgctctggtgaaacctgagaaagctagaggtgtggaggatgtt 352
>gb|AY096627.1| Arabidopsis thaliana putative apoptosis-related protein 19 (At1g29850) mRNA, complete cds Length = 421 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||| ||||| ||||| ||||||||| ||| || |||||||| |||| |||| Sbjct: 129 ggaagctgatgaacgtaggcaaatgatgcttagtcaagtattgtcttctcaagcccgaga 188 Query: 292 gaggctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgtt 349 ||| | | || || ||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 189 gagaattgctcgaattgctctggtgaaacctgagaaagctagaggtgtggaggatgtt 246
>gb|AY045844.1| Arabidopsis thaliana unknown protein (At1g29850) mRNA, complete cds Length = 680 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||| ||||| ||||| ||||||||| ||| || |||||||| |||| |||| Sbjct: 216 ggaagctgatgaacgtaggcaaatgatgcttagtcaagtattgtcttctcaagcccgaga 275 Query: 292 gaggctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgtt 349 ||| | | || || ||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 276 gagaattgctcgaattgctctggtgaaacctgagaaagctagaggtgtggaggatgtt 333
>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24 Length = 303250 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 cacacaagcaaacaaaccaaag 455 |||||||||||||||||||||| Sbjct: 26889 cacacaagcaaacaaaccaaag 26910
>gb|AY057536.1| Arabidopsis thaliana At1g29850/F1N18_19 mRNA, complete cds Length = 672 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||| ||||| ||||| ||||||||| ||| || |||||||| |||| |||| Sbjct: 218 ggaagctgatgaacgtaggcaaatgatgcttagtcaagtattgtcttctcaagcccgaga 277 Query: 292 gaggctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgtt 349 ||| | | || || ||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 278 gagaattgctcgaattgctctggtgaaacctgagaaagctagaggtgtggaggatgtt 335
>emb|BX813938.1|CNS0AC7T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 618 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 232 ggaagctgaggaacgcaggcagatgatgcttgctcagatactgtcttctgaagctagaga 291 ||||||||| ||||| ||||| ||||||||| ||| || |||||||| |||| |||| Sbjct: 174 ggaagctgatgaacgtaggcaaatgatgcttagtcaagtattgtcttctcaagcccgaga 233 Query: 292 gaggctctcccgcatagctttggtcaagcctgataaagcaagaggagtggaggatgtt 349 ||| | | || || ||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 234 gagaattgctcgaattgctctggtgaaacctgagaaagctagaggtgtggaggatgtt 291
>emb|AJ006293.1|AMA6293 Antirrhinum majus mRNA for granule-bound starch synthase Length = 2345 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 cctgataaagcaagaggagtgg 341 |||||||||||||||||||||| Sbjct: 1366 cctgataaagcaagaggagtgg 1387
>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence Length = 188872 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 430 cacccacacaagcaaacaaaccaaa 454 |||||||||||||||||||| |||| Sbjct: 28432 cacccacacaagcaaacaaaacaaa 28456
>gb|AE009068.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 94 of 256 of the complete sequence Length = 10702 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcagaggcgaatgcaagagat 162 ||||||||||||||||||||| Sbjct: 1287 gcagaggcgaatgcaagagat 1267
>emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in linkage group 16, complete sequence Length = 188754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 caaacaaaccaaagtgacgat 462 ||||||||||||||||||||| Sbjct: 38298 caaacaaaccaaagtgacgat 38318
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcagaggcgaatgcaagagat 162 ||||||||||||||||||||| Sbjct: 1030307 gcagaggcgaatgcaagagat 1030287
>gb|AC148318.3| Pan troglodytes BAC clone CH251-496K6 from chromosome 7, complete sequence Length = 194952 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 cacacaagcaaacaaaccaaa 454 ||||||||||||||||||||| Sbjct: 194667 cacacaagcaaacaaaccaaa 194687
>gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome 2R, region 45E1-46A2, BAC clone BACR48G21, complete sequence Length = 156346 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 cacccacacaagcaaacaaaccaaa 454 |||||||||||||||||||| |||| Sbjct: 16221 cacccacacaagcaaacaaaacaaa 16197
>gb|AC102738.9| Mus musculus chromosome 3, clone RP24-303G10, complete sequence Length = 166697 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 gtggaatatctgaaaaggttt 392 ||||||||||||||||||||| Sbjct: 121811 gtggaatatctgaaaaggttt 121831
>emb|BX649472.15| Zebrafish DNA sequence from clone CH211-214K9 in linkage group 20, complete sequence Length = 108623 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 caagcaaacaaaccaaagtga 458 ||||||||||||||||||||| Sbjct: 99102 caagcaaacaaaccaaagtga 99082
>gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18 of 73 of the complete sequence Length = 242171 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 430 cacccacacaagcaaacaaaccaaa 454 |||||||||||||||||||| |||| Sbjct: 27189 cacccacacaagcaaacaaaacaaa 27213
>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones DS00050, DS00191, and DS05369, complete sequence Length = 196337 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 430 cacccacacaagcaaacaaaccaaa 454 |||||||||||||||||||| |||| Sbjct: 23855 cacccacacaagcaaacaaaacaaa 23879
>gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, complete sequence Length = 218218 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 gtggaatatctgaaaaggttt 392 ||||||||||||||||||||| Sbjct: 206869 gtggaatatctgaaaaggttt 206849
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcgatccccgccctgcgca 98 |||||||||||||||||||| Sbjct: 2328577 ggcgatccccgccctgcgca 2328596
>ref|XM_509877.1| PREDICTED: Pan troglodytes similar to KIAA1305 protein (LOC452822), mRNA Length = 3067 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 gagttggaggccatcaggcagagg 148 ||||||| |||||||||||||||| Sbjct: 837 gagttgggggccatcaggcagagg 814
>ref|XM_867647.1| PREDICTED: Bos taurus similar to Cytochrome c oxidase polypeptide VIII-heart, mitochondrial precursor (Cytochrome c oxidase subunit 8-1) (LOC615757), mRNA Length = 354 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 aagcaggaagctgaggaacg 246 |||||||||||||||||||| Sbjct: 238 aagcaggaagctgaggaacg 219
>gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome 13, complete sequence Length = 222741 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cacacaagcaaacaaaccaa 453 |||||||||||||||||||| Sbjct: 59367 cacacaagcaaacaaaccaa 59348
>ref|XM_676690.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8513.2), mRNA Length = 2850 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 catcaggcagaggcgaatgc 155 |||||||||||||||||||| Sbjct: 178 catcaggcagaggcgaatgc 197
>gb|AC126453.5| Mus musculus BAC clone RP23-244A6 from chromosome 6, complete sequence Length = 172616 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 aaactggtggaatatctgaa 385 |||||||||||||||||||| Sbjct: 164196 aaactggtggaatatctgaa 164177
>gb|BC050834.1| Mus musculus a disintegrin-like and metallopeptidse (reprolysin type) with thrombospondin type 1 motif, 1, mRNA (cDNA clone MGC:59345 IMAGE:6505494), complete cds Length = 4909 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 4008 caggaggaagcaaagcagga 3989
>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence Length = 264135 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 aaactggtggaatatctgaa 385 |||||||||||||||||||| Sbjct: 54596 aaactggtggaatatctgaa 54577
>gb|AC163107.3| Mus musculus BAC clone RP23-156A21 from chromosome 16, complete sequence Length = 221691 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 17791 caggaggaagcaaagcagga 17810
>gb|AC124179.4| Mus musculus chromosome 12 clone RP23-198B21, complete sequence Length = 192472 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 atatctgaaaaggtttctga 396 |||||||||||||||||||| Sbjct: 170104 atatctgaaaaggtttctga 170123
>ref|XM_799012.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053511835.10) partial mRNA Length = 3054 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 aggaggaagcaaagcaggaagctgagga 243 ||||||||||| ||||||||| |||||| Sbjct: 2429 aggaggaagcagagcaggaagttgagga 2456
>ref|XM_800111.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053506427.10) partial mRNA Length = 2937 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 aggaggaagcaaagcaggaagctgagga 243 ||||||||||| ||||||||| |||||| Sbjct: 2312 aggaggaagcagagcaggaagttgagga 2339
>ref|XM_811793.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053506577.80) partial mRNA Length = 2718 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 aggaggaagcaaagcaggaagctgagga 243 ||||||||||| ||||||||| |||||| Sbjct: 2093 aggaggaagcagagcaggaagttgagga 2120
>gb|AC123940.4| Mus musculus BAC clone RP23-440M11 from chromosome 12, complete sequence Length = 197665 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 atatctgaaaaggtttctga 396 |||||||||||||||||||| Sbjct: 32366 atatctgaaaaggtttctga 32385
>ref|XM_814397.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053504427.230) partial mRNA Length = 2994 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 aggaggaagcaaagcaggaagctgagga 243 ||||||||||| ||||||||| |||||| Sbjct: 2369 aggaggaagcagagcaggaagttgagga 2396
>gb|AC126936.4| Mus musculus BAC clone RP24-196L14 from chromosome 16, complete sequence Length = 177785 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 111050 caggaggaagcaaagcagga 111069
>ref|XM_797809.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053508603.10) partial mRNA Length = 2160 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 aggaggaagcaaagcaggaagctgagga 243 ||||||||||| ||||||||| |||||| Sbjct: 1538 aggaggaagcagagcaggaagttgagga 1565
>gb|AC018706.3| Homo sapiens BAC clone RP11-99O17 from 7, complete sequence Length = 101611 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 aaagcaagaggagtggagga 345 |||||||||||||||||||| Sbjct: 98677 aaagcaagaggagtggagga 98658
>gb|AC157380.6| Mus musculus chromosome 3, clone RP23-404C21, complete sequence Length = 196528 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ggggcacgatggctgaccat 118 |||||||||||||||||||| Sbjct: 74427 ggggcacgatggctgaccat 74408
>gb|BC112717.1| Bos taurus cytochrome c oxidase subunit VIII, heart, mRNA (cDNA clone MGC:137328 IMAGE:8172877), complete cds Length = 1441 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 aagcaggaagctgaggaacg 246 |||||||||||||||||||| Sbjct: 216 aagcaggaagctgaggaacg 197
>emb|AL499602.6| Human DNA sequence from clone RP11-158H18 on chromosome 9 Contains a novel gene and two CpG islands, complete sequence Length = 175560 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 acaaaaggcccaggaggaag 224 |||||||||||||||||||| Sbjct: 80806 acaaaaggcccaggaggaag 80825
>emb|AL137782.9| Human DNA sequence from clone RP11-29G8 on chromosome 13q22.1-31.1 Contains part of the LMO7 gene for LIM domain only 7 (KIAA0858) and a novel pseudogene (FLJ13188, FLJ22977), complete sequence Length = 139252 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 aaaaggcccaggaggaagca 226 |||||||||||||||||||| Sbjct: 18432 aaaaggcccaggaggaagca 18413
>gb|AC113409.2| Homo sapiens chromosome 5 clone RP11-483H11, complete sequence Length = 157208 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gcaaatcaacacccacacaa 440 |||||||||||||||||||| Sbjct: 25989 gcaaatcaacacccacacaa 26008
>ref|NM_009621.3| Mus musculus a disintegrin-like and metallopeptidse (reprolysin type) with thrombospondin type 1 motif, 1 (Adamts1), mRNA Length = 4909 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 4008 caggaggaagcaaagcagga 3989
>ref|XM_940150.1| PREDICTED: Homo sapiens KIAA1305 (KIAA1305), mRNA Length = 7845 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 gagttggaggccatcaggcagagg 148 ||||||| |||||||||||||||| Sbjct: 3779 gagttgggggccatcaggcagagg 3756
>ref|XM_370756.3| PREDICTED: Homo sapiens KIAA1305 (KIAA1305), mRNA Length = 7845 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 gagttggaggccatcaggcagagg 148 ||||||| |||||||||||||||| Sbjct: 3779 gagttgggggccatcaggcagagg 3756
>dbj|AK156830.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830102H03 product:a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 1, full insert sequence Length = 4523 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 4023 caggaggaagcaaagcagga 4004
>dbj|AK161046.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631422D01 product:unclassifiable, full insert sequence Length = 2757 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 2391 acacaagcaaacaaaccaaa 2372
>gb|AC163708.3| Gallus gallus BAC clone CH261-58P10 from chromosome ul, complete sequence Length = 226873 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 126884 acacaagcaaacaaaccaaa 126865
>emb|BX571800.8| Zebrafish DNA sequence from clone DKEY-29B15 in linkage group 5, complete sequence Length = 195520 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 atactgtcttctgaagctagagag 292 |||||| ||||||||||||||||| Sbjct: 66913 atactggcttctgaagctagagag 66890
>gb|AC068658.4| Homo sapiens chromosome 5 clone CTC-228N24, complete sequence Length = 128928 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gcaaatcaacacccacacaa 440 |||||||||||||||||||| Sbjct: 26834 gcaaatcaacacccacacaa 26815
>dbj|AK051953.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230023H18 product:unclassifiable, full insert sequence Length = 2945 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 2267 acacaagcaaacaaaccaaa 2248
>dbj|AK035285.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530009M10 product:unclassifiable, full insert sequence Length = 3809 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 2520 acacaagcaaacaaaccaaa 2501
>dbj|AB177878.1| Python regius mitochondrial DNA, complete genome Length = 17245 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ccacacaagcaaacaaacca 452 |||||||||||||||||||| Sbjct: 12267 ccacacaagcaaacaaacca 12286
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gatactgtcttctgaagcta 287 |||||||||||||||||||| Sbjct: 78255 gatactgtcttctgaagcta 78274
>emb|BX321885.11| Zebrafish DNA sequence from clone CH211-240L19 in linkage group 4, complete sequence Length = 155649 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gagctgcacaaactggtgga 376 |||||||||||||||||||| Sbjct: 74443 gagctgcacaaactggtgga 74462
>gb|AC007015.1|AC007015 Homo sapiens chromosome 5q, Bac clone 89n19 (LBNL h200) and 361j5 (LBNL h205), complete sequence Length = 56918 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gcaaatcaacacccacacaa 440 |||||||||||||||||||| Sbjct: 33176 gcaaatcaacacccacacaa 33195
>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185251 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 gagttggaggccatcaggcagagg 148 ||||||| |||||||||||||||| Sbjct: 152525 gagttgggggccatcaggcagagg 152548
>gb|AY870921.1| Teucrium canadense isolate cy450P3C8 cytochrome P450 gene, partial cds Length = 377 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 caacaaaaggcccaggagga 222 |||||||||||||||||||| Sbjct: 56 caacaaaaggcccaggagga 75
>gb|AC171008.2| Gallus gallus BAC clone CH261-169D8 from chromosome ul, complete sequence Length = 170270 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 22572 acacaagcaaacaaaccaaa 22591
>gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, complete sequence Length = 173710 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 93921 acacaagcaaacaaaccaaa 93902
>gb|AC005277.1|AC005277 Homo sapiens chromosome 17, clone hRPK.597_M_12, complete sequence Length = 118788 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agcaaagcaggaagctgagg 242 |||||||||||||||||||| Sbjct: 13148 agcaaagcaggaagctgagg 13129
>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence Length = 202763 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 aggaagcaaagcaggaagct 238 |||||||||||||||||||| Sbjct: 121246 aggaagcaaagcaggaagct 121227
>gb|AC132228.3| Mus musculus BAC clone RP24-480G11 from 6, complete sequence Length = 180203 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 aaactggtggaatatctgaa 385 |||||||||||||||||||| Sbjct: 33492 aaactggtggaatatctgaa 33473
>gb|AC134463.3| Mus musculus BAC clone RP23-425N12 from 5, complete sequence Length = 200629 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 47091 acacaagcaaacaaaccaaa 47072
>gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, complete sequence Length = 175644 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acacaagcaaacaaaccaaa 454 |||||||||||||||||||| Sbjct: 57255 acacaagcaaacaaaccaaa 57236
>gb|U15540.1|BTU15540 Bos taurus cytochrome c oxidase subunit VIII-H precursor (COX8H) gene, complete cds Length = 4642 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 aagcaggaagctgaggaacg 246 |||||||||||||||||||| Sbjct: 4300 aagcaggaagctgaggaacg 4281
>gb|J05202.1|BOVCOXIH Bovine heart cytochrome c oxidase subunit CIX (VIII) mRNA, complete cds Length = 288 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 aagcaggaagctgaggaacg 246 |||||||||||||||||||| Sbjct: 164 aagcaggaagctgaggaacg 145
>dbj|D67076.1| Mouse mRNA for secretory protein containing thrombospondin motifs, complete cds Length = 4180 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 4016 caggaggaagcaaagcagga 3997
>dbj|AB001735.1| Mus musculus DNA for ADAMTS-1, complete cds Length = 9248 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 caggaggaagcaaagcagga 234 |||||||||||||||||||| Sbjct: 8399 caggaggaagcaaagcagga 8380
>dbj|AB037726.2| Homo sapiens mRNA for KIAA1305 protein, partial cds Length = 7296 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 gagttggaggccatcaggcagagg 148 ||||||| |||||||||||||||| Sbjct: 3230 gagttgggggccatcaggcagagg 3207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,356,069 Number of Sequences: 3902068 Number of extensions: 4356069 Number of successful extensions: 106157 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 105934 Number of HSP's gapped (non-prelim): 226 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)