ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd2i01 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 61.2 bits (147), Expect = 2e-09 Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 9/195 (4%) Frame = +2 Query: 41 TDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKM 220 TD L+ AQ +LW + ++++AL+ A+ L I AIH GG S+S +++ + L S++ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 221 PYXXXXXXXXXXX---------XXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLT 373 E Y+L P+S LL+ + +Q + Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQ--SSQLAQTPLAAM 126 Query: 374 TTSRHYIEAALGLADWFKKDIAPPPSPFEDVHGATLFEESMALLDPESDKMFHEALAAHD 553 + L WF+ ++ P P F+ HG ++E + D D + ++ LA+ Sbjct: 127 VLDPTIVSPFSELGAWFQHEL-PDPCIFKHTHGRGIWE--LTKDDATFDALVNDGLASDS 183 Query: 554 HLGIGTILRECHDLF 598 L + +++ ++F Sbjct: 184 QLIVDVAIKQSAEVF 198
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 58.9 bits (141), Expect = 1e-08 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 6/176 (3%) Frame = +2 Query: 50 QLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL----PQSK 217 QL+QAQA +W H +++L+CA+QLGIP +H+ ++S L+ A+ + QS Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 218 MPYXXXXXXXXXXXXXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR--HY 391 +E Y L P S LL+ G + + ++ T + HY Sbjct: 74 QRLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTFTNPWHY 133 Query: 392 IEAALGLADWFKKDIAPPPSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHL 559 +++WFK + + FE +G T +E+ P + F EA++ L Sbjct: 134 ------MSEWFKHE--NHATQFEAANGCTFWEK--LANKPSMGRFFDEAMSCDSRL 179
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 54.3 bits (129), Expect = 3e-07 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 5/175 (2%) Frame = +2 Query: 50 QLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKMP-- 223 QL+QAQ +W H +++L+CA+QLGIP +H+ G ++S L+ ++ + + K Sbjct: 14 QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCF 73 Query: 224 ---YXXXXXXXXXXXXXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYI 394 +E Y L P S LL+ + + +V + Sbjct: 74 QRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLLK----EAPLTVTPLVQVVLDPTFT 129 Query: 395 EAALGLADWFKKDIAPPPSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHL 559 +++WF + + FE +G T +E+ +P + F EA++ L Sbjct: 130 NPWHHMSEWFTHE--KHATQFEAANGCTFWEK--LANEPSKGRFFDEAMSCDSRL 180
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 53.9 bits (128), Expect = 3e-07 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 5/189 (2%) Frame = +2 Query: 47 AQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKM-- 220 +++ +AQA L++H + +++L+ AV + IP IH G S+S+LV+ L +P SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 221 PYXXXXXXXXXXXXXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEA 400 +E +Y+L S LLV G + + ++ T S Y E Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHE- 129 Query: 401 ALGLADW-FKKDIAPPPSPFEDVHGATLFEESMALLD--PESDKMFHEALAAHDHLGIGT 571 L W +++D+ + G TL LD PE + F++A+A+ L I Sbjct: 130 ---LKKWIYEEDLT--------LFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKL-INL 177 Query: 572 ILRECHDLF 598 LR+C +F Sbjct: 178 ALRDCDFVF 186
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 52.4 bits (124), Expect = 1e-06 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 5/189 (2%) Frame = +2 Query: 47 AQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKM-- 220 +++ +AQA L++H + +++L+ AV++ IP I G S+S+LV+ L +P SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 221 PYXXXXXXXXXXXXXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEA 400 +E +Y+L S LLV G + + ++ T S Y E Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHE- 129 Query: 401 ALGLADW-FKKDIAPPPSPFEDVHGATLFEESMALLD--PESDKMFHEALAAHDHLGIGT 571 L W +++D+ + G TL LD PE + F++A+A+ L I Sbjct: 130 ---LKKWIYEEDLT--------LFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKL-INL 177 Query: 572 ILRECHDLF 598 LR+C +F Sbjct: 178 ALRDCDFVF 186
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 52.4 bits (124), Expect = 1e-06 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 5/189 (2%) Frame = +2 Query: 47 AQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKM-- 220 +++ +AQA L++H + +++L+ AV++ IP I G S+S+LV+ L +P SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 221 PYXXXXXXXXXXXXXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEA 400 +E +Y+L S LLV G + + ++ T S Y E Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHE- 129 Query: 401 ALGLADW-FKKDIAPPPSPFEDVHGATLFEESMALLD--PESDKMFHEALAAHDHLGIGT 571 L W +++D+ + G TL LD PE + F++A+A+ L I Sbjct: 130 ---LKKWIYEEDLT--------LFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKL-INL 177 Query: 572 ILRECHDLF 598 LR+C +F Sbjct: 178 ALRDCDFVF 186
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 49.7 bits (117), Expect = 6e-06 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 6/171 (3%) Frame = +2 Query: 56 IQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKMP---- 223 I+AQA +W+H I LR V LGIP IH G ++S LVT L L + + Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSIDRFHH 71 Query: 224 -YXXXXXXXXXXXXXXXXPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEA 400 KE Y L P S LLV G QK++ + + E Sbjct: 72 FMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHG-------HQKSLAPYVMLQTHPEE 124 Query: 401 ALGLADWFKK-DIAPPPSPFEDVHGATLFEESMALLDPESDKMFHEALAAH 550 + W ++ P+ + + +++E++ DPE +++ ++A+ +H Sbjct: 125 ---FSVWSHVINVLDGKKPYWESNDTSMYEKTEG--DPEINEILNDAMTSH 170
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 45.4 bits (106), Expect = 1e-04 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 3/184 (1%) Frame = +2 Query: 56 IQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTAL-SLPQSKMPYXX 232 + +QA LW ++ L+CAVQL + IH G + ++S+L + L S P ++ Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67 Query: 233 XXXXXXXXXXXXXXPKEG--TYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAAL 406 +G Y L P + LV G + +L T + ++ Sbjct: 68 VMRYLVHMKLFTKASIDGELRYGLAPPAKYLVKG----WDKCMVGSILAITDKDFMAPWH 123 Query: 407 GLADWFKKDIAPPPSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 586 L D + + FE G ++ PE +++F+EA+A L + +++EC Sbjct: 124 YLKDGLSGESG---TAFEKALGTNIW--GYMAEHPEKNQLFNEAMANDSRLIMSALVKEC 178 Query: 587 HDLF 598 ++F Sbjct: 179 GNIF 182
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 40.0 bits (92), Expect = 0.005 Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 6/187 (3%) Frame = +2 Query: 56 IQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKMPYXXX 235 I+AQA +W+ ++ LRCAV+LGI I +++DL + L + Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 236 XXXXXXXXXXXXXPK----EGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAA 403 K + Y+L P++ LL + + S ++L T + + Sbjct: 72 ILRYLVKMEILRVEKSDDGQKKYALEPIATLLSR----NAKRSMVPMILGMTQKDF---- 123 Query: 404 LGLADW--FKKDIAPPPSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTIL 577 + W K ++ + FE G T++E P+ ++F+E +A L +++ Sbjct: 124 --MTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEG--HPDQSQLFNEGMAGETRLLTSSLI 179 Query: 578 RECHDLF 598 D+F Sbjct: 180 SGSRDMF 186
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 33.5 bits (75), Expect = 0.48 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +1 Query: 4 AMAAQXSNHGSPHRC--PTDSGAGGPMAP*LVPPQGHSTQVCCPARHPYCDSPT 159 A AA +N G PH P G G P + + P HS P R P SPT Sbjct: 466 AAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASPPPRPPSTPSPT 519
>COMT1_EUCGL (Q9SWC2) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) (Fragment) Length = 313 Score = 30.8 bits (68), Expect = 3.1 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 5/104 (4%) Frame = +2 Query: 281 EGTYSLVPLSYLLV---DGVFIDGEASQKAIVLTTTSRHYIEAALGLADWF--KKDIAPP 445 E Y L PL LV DGV S + L R ++E+ W+ K I Sbjct: 85 ERLYGLAPLCKFLVKNEDGV------SLAPLRLIDQDRVFLES------WYYMKDAILEG 132 Query: 446 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTIL 577 PF HG T F+ DP +K+F+ A++ H + + IL Sbjct: 133 GIPFHKAHGMTAFDYPGT--DPRFNKIFNRAMSDHSTIMMKKIL 174
>HDC_DROME (Q9N2M8) Headcase protein [Contains: Headcase short protein]| Length = 1080 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -2 Query: 561 PKW--SWAAKASWNILSDS-GSRSAILSSKSVAP*TSSNGDGGGAMSFLNQSASPKAAS 394 P W S A A W S S G S S S++P SSNG+ G M +SP+ A+ Sbjct: 872 PTWGQSDAISALWGCSSSSSGCSSGSGSQPSLSPTASSNGNDGSKMMLWAAQSSPQNAA 930
>CBIO_DESVH (Q72D73) Cobalt import ATP-binding protein cbiO| Length = 273 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +2 Query: 476 TLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLF 598 TL +M LL PES + H AHD + + R+ LF Sbjct: 52 TLLHIAMGLLRPESGTVHHRNAVAHDEASLAALRRDIGFLF 92
>HXB3A_BRARE (O42368) Homeobox protein Hox-B3a (Hox-B3)| Length = 417 Score = 29.6 bits (65), Expect = 6.9 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Frame = -2 Query: 456 NGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSGTRE*VPSL 277 +G GGGA S +S K++SM + + W+ NT S + S Sbjct: 109 SGGGGGAGSGGTSKSSSKSSSMATNPTLTKQIFPWMKESRQNTKQKNSSPSASSANAESS 168 Query: 276 GDAKA-PDAANNRKTRPRY 223 G K+ P +A +++ R Y Sbjct: 169 GGEKSPPGSAASKRARTAY 187
>GCH1_SCHPO (O13774) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 235 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1 Query: 127 PARHPYCDSPTRWHNLSVRSCHRIVPTTI*DAISWPCLAVVGRV 258 P + Y DSP R S+ PT D +SWPC R+ Sbjct: 3 PGKKDYIDSPLRMQPASLSGAS--TPTIDLDGLSWPCQGTQRRI 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,961,289 Number of Sequences: 219361 Number of extensions: 2104924 Number of successful extensions: 5550 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 5341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5545 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
