>dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full
            insert sequence
          Length = 2183

 Score =  373 bits (188), Expect = e-100
 Identities = 276/304 (90%), Gaps = 1/304 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggtgcacggtagcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatga 61
            ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||| |||||||
Sbjct: 1188 ggtgcacggtagcaacaag-aagttcgatactgatgtctctcttgaagtcatagcaatga 1246

                                                                        
Query: 62   gaacacctgggttcagtggagcagacttggcgaatcttctgaacgaggcagccatattag 121
            |||||||||| || ||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 1247 gaacacctggctttagtggagcagacttggcaaatcttctaaatgaagcagccatattag 1306

                                                                        
Query: 122  caggccgacgtgggaggaccggaatttcctcaaaggagattgacgattcaattgatagga 181
            | |||||||||||  |||| | ||||||||||||||||||||| ||||||||||| || |
Sbjct: 1307 cgggccgacgtggtcggacagcaatttcctcaaaggagattgatgattcaattgacagaa 1366

                                                                        
Query: 182  tagtggctggtatggaagggactgtcatgacagatgggaagagcaaaagtcttgttgctt 241
            ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1367 tagtggctggtatggaaggaactgtgatgacagatgggaagagcaaaagtcttgttgctt 1426

                                                                        
Query: 242  accacgaagtcgggcatgcagtttgcggaactttgacgcctggccacgaccccgtccaga 301
            |||| ||||| ||||||||| |||| |||||||||||||||||||||||||| ||||| |
Sbjct: 1427 accatgaagttgggcatgcaatttgtggaactttgacgcctggccacgaccctgtccaaa 1486

                
Query: 302  aggt 305
            ||||
Sbjct: 1487 aggt 1490

>dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M12, full
            insert sequence
          Length = 2433

 Score =  373 bits (188), Expect = e-100
 Identities = 276/304 (90%), Gaps = 1/304 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggtgcacggtagcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatga 61
            ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||| |||||||
Sbjct: 1438 ggtgcacggtagcaacaag-aagttcgatactgatgtctctcttgaagtcatagcaatga 1496

                                                                        
Query: 62   gaacacctgggttcagtggagcagacttggcgaatcttctgaacgaggcagccatattag 121
            |||||||||| || ||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 1497 gaacacctggctttagtggagcagacttggcaaatcttctaaatgaagcagccatattag 1556

                                                                        
Query: 122  caggccgacgtgggaggaccggaatttcctcaaaggagattgacgattcaattgatagga 181
            | |||||||||||  |||| | ||||||||||||||||||||| ||||||||||| || |
Sbjct: 1557 cgggccgacgtggtcggacagcaatttcctcaaaggagattgatgattcaattgacagaa 1616

                                                                        
Query: 182  tagtggctggtatggaagggactgtcatgacagatgggaagagcaaaagtcttgttgctt 241
            ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1617 tagtggctggtatggaaggaactgtgatgacagatgggaagagcaaaagtcttgttgctt 1676

                                                                        
Query: 242  accacgaagtcgggcatgcagtttgcggaactttgacgcctggccacgaccccgtccaga 301
            |||| ||||| ||||||||| |||| |||||||||||||||||||||||||| ||||| |
Sbjct: 1677 accatgaagttgggcatgcaatttgtggaactttgacgcctggccacgaccctgtccaaa 1736

                
Query: 302  aggt 305
            ||||
Sbjct: 1737 aggt 1740

>dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F12, full
            insert sequence
          Length = 2276

 Score =  365 bits (184), Expect = 6e-98
 Identities = 275/304 (90%), Gaps = 1/304 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggtgcacggtagcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatga 61
            ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||| |||||||
Sbjct: 1248 ggtgcacggtagcaacaag-aagttcgatactgatgtctctcttgaagtcatagcaatga 1306

                                                                        
Query: 62   gaacacctgggttcagtggagcagacttggcgaatcttctgaacgaggcagccatattag 121
            |||||||||| || ||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 1307 gaacacctggctttagtggagcagacttggcaaatcttctaaatgaagcagccatattag 1366

                                                                        
Query: 122  caggccgacgtgggaggaccggaatttcctcaaaggagattgacgattcaattgatagga 181
            | |||||||||||  |||| | ||||||||||||||||||||| ||||||||||| || |
Sbjct: 1367 cgggccgacgtggtcggacagcaatttcctcaaaggagattgatgattcaattgacagaa 1426

                                                                        
Query: 182  tagtggctggtatggaagggactgtcatgacagatgggaagagcaaaagtcttgttgctt 241
            ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 1427 tagtggctggtatggaaggaactgtgatgacagatgggaagagcaaaagtcttgtcgctt 1486

                                                                        
Query: 242  accacgaagtcgggcatgcagtttgcggaactttgacgcctggccacgaccccgtccaga 301
            |||| ||||| ||||||||| |||| |||||||||||||||||||||||||| ||||| |
Sbjct: 1487 accatgaagttgggcatgcaatttgtggaactttgacgcctggccacgaccctgtccaaa 1546

                
Query: 302  aggt 305
            ||||
Sbjct: 1547 aggt 1550

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  319 bits (161), Expect = 3e-84
 Identities = 240/265 (90%), Gaps = 1/265 (0%)
 Strand = Plus / Minus

                                                                            
Query: 2        ggtgcacggtagcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatga 61
                ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||| |||||||
Sbjct: 27342296 ggtgcacggtagcaacaag-aagttcgatactgatgtctctcttgaagtcatagcaatga 27342238

                                                                            
Query: 62       gaacacctgggttcagtggagcagacttggcgaatcttctgaacgaggcagccatattag 121
                |||||||||| || ||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 27342237 gaacacctggctttagtggagcagacttggcaaatcttctaaatgaagcagccatattag 27342178

                                                                            
Query: 122      caggccgacgtgggaggaccggaatttcctcaaaggagattgacgattcaattgatagga 181
                | |||||||||||  |||| | ||||||||||||||||||||| ||||||||||| || |
Sbjct: 27342177 cgggccgacgtggtcggacagcaatttcctcaaaggagattgatgattcaattgacagaa 27342118

                                                                            
Query: 182      tagtggctggtatggaagggactgtcatgacagatgggaagagcaaaagtcttgttgctt 241
                ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 27342117 tagtggctggtatggaaggaactgtgatgacagatgggaagagcaaaagtcttgttgctt 27342058

                                         
Query: 242      accacgaagtcgggcatgcagtttg 266
                |||| ||||| ||||||||| ||||
Sbjct: 27342057 accatgaagttgggcatgcaatttg 27342033



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 269      gaactttgacgcctggccacgaccccgtccagaaggt 305
                ||||||||||||||||||||||||| ||||| |||||
Sbjct: 27341930 gaactttgacgcctggccacgaccctgtccaaaaggt 27341894

>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0686E06
          Length = 150474

 Score =  319 bits (161), Expect = 3e-84
 Identities = 240/265 (90%), Gaps = 1/265 (0%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggtgcacggtagcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatga 61
             ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||| |||||||
Sbjct: 85123 ggtgcacggtagcaacaag-aagttcgatactgatgtctctcttgaagtcatagcaatga 85065

                                                                         
Query: 62    gaacacctgggttcagtggagcagacttggcgaatcttctgaacgaggcagccatattag 121
             |||||||||| || ||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 85064 gaacacctggctttagtggagcagacttggcaaatcttctaaatgaagcagccatattag 85005

                                                                         
Query: 122   caggccgacgtgggaggaccggaatttcctcaaaggagattgacgattcaattgatagga 181
             | |||||||||||  |||| | ||||||||||||||||||||| ||||||||||| || |
Sbjct: 85004 cgggccgacgtggtcggacagcaatttcctcaaaggagattgatgattcaattgacagaa 84945

                                                                         
Query: 182   tagtggctggtatggaagggactgtcatgacagatgggaagagcaaaagtcttgttgctt 241
             ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 84944 tagtggctggtatggaaggaactgtgatgacagatgggaagagcaaaagtcttgttgctt 84885

                                      
Query: 242   accacgaagtcgggcatgcagtttg 266
             |||| ||||| ||||||||| ||||
Sbjct: 84884 accatgaagttgggcatgcaatttg 84860



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 269   gaactttgacgcctggccacgaccccgtccagaaggt 305
             ||||||||||||||||||||||||| ||||| |||||
Sbjct: 84757 gaactttgacgcctggccacgaccctgtccaaaaggt 84721

>gb|AY105892.1| Zea mays PCO103778 mRNA sequence
          Length = 2203

 Score =  285 bits (144), Expect = 4e-74
 Identities = 264/303 (87%), Gaps = 1/303 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    gtgcacggtagcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatgag 62
            ||||| ||| |||||||| || |||||| | ||||||||||| || ||||| ||||||||
Sbjct: 1093 gtgcatggtggcaacaagaaa-tttgattctgatgtttctctcgatgtcatagcaatgag 1151

                                                                        
Query: 63   aacacctgggttcagtggagcagacttggcgaatcttctgaacgaggcagccatattagc 122
            |||||||||||||||||||||||||||||| || |||||||| || ||||||||  | ||
Sbjct: 1152 aacacctgggttcagtggagcagacttggcaaaccttctgaatgaagcagccattctggc 1211

                                                                        
Query: 123  aggccgacgtgggaggaccggaatttcctcaaaggagattgacgattcaattgataggat 182
             || || || |||||||| | |||||| ||||| ||||| || ||||| ||||| || ||
Sbjct: 1212 tggacggcgggggaggacagcaatttcttcaaaagagatagatgattctattgacagaat 1271

                                                                        
Query: 183  agtggctggtatggaagggactgtcatgacagatgggaagagcaaaagtcttgttgctta 242
             ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1272 tgtggctggtatggaagggactgtgatgacagacgggaagagcaaaagtcttgttgctta 1331

                                                                        
Query: 243  ccacgaagtcgggcatgcagtttgcggaactttgacgcctggccacgaccccgtccagaa 302
            ||| ||||||||||||||| |||||||||||||||| |||||||| || || ||||| ||
Sbjct: 1332 ccatgaagtcgggcatgcaatttgcggaactttgacacctggccatgatcctgtccaaaa 1391

               
Query: 303  ggt 305
            |||
Sbjct: 1392 ggt 1394

>dbj|AB236793.1| Trifolium pratense RNA for putative zinc dependent protease, complete
            cds, clone: C1867
          Length = 2414

 Score =  123 bits (62), Expect = 4e-25
 Identities = 215/266 (80%)
 Strand = Plus / Plus

                                                                        
Query: 22   aagtttgatgccgatgtttctcttgaagtcattgcaatgagaacacctgggttcagtgga 81
            ||||||||| | ||||||||||||||| |  ||||||||||||||||||| || || |||
Sbjct: 1284 aagtttgattcggatgtttctcttgaaatagttgcaatgagaacacctggttttagcgga 1343

                                                                        
Query: 82   gcagacttggcgaatcttctgaacgaggcagccatattagcaggccgacgtgggaggacc 141
            || ||  | || |||||  |||| || || || |||||||| || ||  | || | | | 
Sbjct: 1344 gctgatcttgcaaatctcttgaatgaagctgctatattagctggtcggagaggaaagtca 1403

                                                                        
Query: 142  ggaatttcctcaaaggagattgacgattcaattgataggatagtggctggtatggaaggg 201
            || ||||| || || |||||||| ||||| ||||||||||| || ||||| |||||||| 
Sbjct: 1404 ggcatttcatctaaagagattgatgattctattgataggattgtcgctggaatggaagga 1463

                                                                        
Query: 202  actgtcatgacagatgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgca 261
            ||  | ||||| |||||||||||||||||| | || || || || |||||||||||||| 
Sbjct: 1464 acattaatgactgatgggaagagcaaaagtttagtggcatatcatgaagtcgggcatgcc 1523

                                      
Query: 262  gtttgcggaactttgacgcctggcca 287
             |||||||||||||||| ||||||||
Sbjct: 1524 atttgcggaactttgactcctggcca 1549

>ref|NM_100523.3| Arabidopsis thaliana FTSH8; ATP-dependent peptidase/ ATPase/
            metallopeptidase/ zinc ion binding AT1G06430 (FTSH8)
            mRNA, complete cds
          Length = 2251

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Plus

                                                                        
Query: 36   tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
            |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 1270 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 1329

                                                                        
Query: 96   tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
             ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 1330 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 1389

                                                                        
Query: 156  ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
             |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 1390 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 1449

                                                         
Query: 216  tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 1450 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 1494

>gb|AY045951.1| Arabidopsis thaliana putative FtsH protease (At1g06430) mRNA,
           partial cds
          Length = 1630

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
           |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 682 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 741

                                                                       
Query: 96  tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
            ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 742 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 801

                                                                       
Query: 156 ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
            |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 802 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 861

                                                        
Query: 216 tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
           |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 862 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 906

>gb|AF419565.1|AF419565 Arabidopsis thaliana At1g06430/F12K11_24 mRNA, complete cds
          Length = 2228

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Plus

                                                                        
Query: 36   tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
            |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 1270 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 1329

                                                                        
Query: 96   tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
             ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 1330 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 1389

                                                                        
Query: 156  ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
             |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 1390 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 1449

                                                         
Query: 216  tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 1450 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 1494

>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 41039

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Minus

                                                                         
Query: 36    tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
             |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 39234 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 39175

                                                                         
Query: 96    tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
              ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 39174 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 39115

                                                                         
Query: 156   ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
              |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 39114 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 39055

                                                          
Query: 216   tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
             |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 39054 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 39010

>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
             complete sequence
          Length = 93724

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Plus

                                                                         
Query: 36    tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
             |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 92807 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 92866

                                                                         
Query: 96    tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
              ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 92867 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 92926

                                                                         
Query: 156   ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
              |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 92927 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 92986

                                                          
Query: 216   tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
             |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 92987 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 93031

>gb|BT003813.1| Arabidopsis thaliana clone C104937 putative FtsH protease (At1g06430)
            mRNA, complete cds
          Length = 2089

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Plus

                                                                        
Query: 36   tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
            |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 1233 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 1292

                                                                        
Query: 96   tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
             ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 1293 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 1352

                                                                        
Query: 156  ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
             |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 1353 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 1412

                                                         
Query: 216  tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 1413 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 1457

>gb|BT002649.1| Arabidopsis thaliana At1g06430/F12K11_24 gene, complete cds
          Length = 2058

 Score =  121 bits (61), Expect = 1e-24
 Identities = 184/225 (81%)
 Strand = Plus / Plus

                                                                        
Query: 36   tgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcagacttggcgaa 95
            |||||| |||||||| || || |||||||||||||| || || ||||| ||  | || ||
Sbjct: 1233 tgtttcacttgaagtaatagccatgagaacacctggatttagcggagctgatcttgcaaa 1292

                                                                        
Query: 96   tcttctgaacgaggcagccatattagcaggccgacgtgggaggaccggaatttcctcaaa 155
             ||  |||||||||| |||||||| || ||||| ||||| | ||| | ||| || |||||
Sbjct: 1293 cctcttgaacgaggctgccatattggccggccgccgtggaaagactgcaatatcatcaaa 1352

                                                                        
Query: 156  ggagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacaga 215
             |||||||| || |||||||| || || || ||||| |||||||| || |||||||||||
Sbjct: 1353 agagattgatgactcaattgacagaattgtagctggcatggaaggaacagtcatgacaga 1412

                                                         
Query: 216  tgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            |||||||||||||||  | ||||||||||| ||||| || |||||
Sbjct: 1413 tgggaagagcaaaagcttggttgcttaccatgaagttggccatgc 1457

>dbj|AB236774.1| Trifolium pratense RNA for putative zinc dependent protease, complete
            cds, clone: C1597
          Length = 2290

 Score =  117 bits (59), Expect = 2e-23
 Identities = 212/263 (80%)
 Strand = Plus / Plus

                                                                        
Query: 25   tttgatgccgatgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagca 84
            ||||| || |||||||||||||| ||  ||||||||||||||||||| || |||||||| 
Sbjct: 1265 tttgacgctgatgtttctcttgaggtagttgcaatgagaacacctggctttagtggagct 1324

                                                                        
Query: 85   gacttggcgaatcttctgaacgaggcagccatattagcaggccgacgtgggaggaccgga 144
            ||  | || || ||  |||| || || || |||||||| || || ||||| | |   | |
Sbjct: 1325 gatcttgcaaacctcttgaatgaagctgctatattagctggtcggcgtggaaaggtggaa 1384

                                                                        
Query: 145  atttcctcaaaggagattgacgattcaattgataggatagtggctggtatggaagggact 204
            ||||| ||||| |||||||| ||||| ||||||||||| || ||||| |||||||| || 
Sbjct: 1385 atttcatcaaaagagattgatgattctattgataggattgtagctggaatggaaggaaca 1444

                                                                        
Query: 205  gtcatgacagatgggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgcagtt 264
            || ||||||||||| |||||||||| | | || || || || ||||| ||||||||  ||
Sbjct: 1445 gtgatgacagatggaaagagcaaaaatttagtggcatatcatgaagttgggcatgccatt 1504

                                   
Query: 265  tgcggaactttgacgcctggcca 287
            || ||||||||||| ||||||||
Sbjct: 1505 tgtggaactttgactcctggcca 1527

>gb|AF117339.1|AF117339 Nicotiana tabacum FtsH-like protein Pftf precursor (Pftf) mRNA,
            nuclear gene encoding chloroplast protein, complete cds
          Length = 2346

 Score =  111 bits (56), Expect = 1e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 157  gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
            |||||||| |||||||||||||||||||||||||| |||||||| || |||||||| |||
Sbjct: 1465 gagattgatgattcaattgataggatagtggctggaatggaaggaacagtcatgactgat 1524

                                                        
Query: 217  gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            || |||||||| ||||| || || ||||||||||| || |||||
Sbjct: 1525 ggcaagagcaagagtctggtggcataccacgaagttggacatgc 1568



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 62/74 (83%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                        
Query: 13   gcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatgagaacacctggg 72
            |||||||| ||||| ||| | ||||||||||||||||| || || ||||| ||||| || 
Sbjct: 1322 gcaacaag-aagttcgattctgatgtttctcttgaagttatagccatgaggacacccggt 1380

                          
Query: 73   ttcagtggagcaga 86
            || ||||| |||||
Sbjct: 1381 tttagtggtgcaga 1394

>gb|AF315589.2| Petunia x hybrida cv. Dazzler CDC48 cell division-like protein
           gene, partial sequence
          Length = 1035

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                       
Query: 157 gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
           |||||||| |||||||||||||||||||||||||| |||||||| || |||||||| |||
Sbjct: 169 gagattgatgattcaattgataggatagtggctggaatggaaggaacagtcatgactgat 228

                            
Query: 217 gggaagagcaaaagtct 233
           || |||||||| |||||
Sbjct: 229 ggcaagagcaagagtct 245



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13 gcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatgagaacacctggg 72
          |||||||| ||||| ||| | ||||||||||||||||| || || ||||| |||||||| 
Sbjct: 26 gcaacaag-aagttcgattctgatgtttctcttgaagttatagccatgaggacacctggt 84

                        
Query: 73 ttcagtggagcaga 86
          ||||||||||||||
Sbjct: 85 ttcagtggagcaga 98

>emb|AJ012165.1|CAN012165 Capsicum annuum mRNA for chloroplast protease (CACP)from the AAA
            atpase family
          Length = 2233

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                        
Query: 157  gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
            |||||||| ||||||||||| |||||||||||||| |||||||| || || ||||| |||
Sbjct: 1412 gagattgatgattcaattgacaggatagtggctggaatggaaggaacagtaatgactgat 1471

                                                        
Query: 217  gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            || |||||||| |||||||| || || |||||||| || |||||
Sbjct: 1472 ggcaagagcaagagtcttgtggcatatcacgaagttggacatgc 1515



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                        
Query: 13   gcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatgagaacacctggg 72
            |||||||| ||||| ||| | ||||| ||||||||||| ||||| ||||| |||||||| 
Sbjct: 1269 gcaacaag-aagttcgattcagatgtgtctcttgaagttattgccatgaggacacctggc 1327

                          
Query: 73   ttcagtggagcaga 86
            ||||||||||||||
Sbjct: 1328 ttcagtggagcaga 1341

>emb|X80755.1|CAPFTF C.annuum mRNA for PFTF (plastid fusion and/or translation factor
          Length = 2197

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                        
Query: 157  gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
            |||||||| ||||||||||| |||||||||||||| |||||||| || || ||||| |||
Sbjct: 1390 gagattgatgattcaattgacaggatagtggctggaatggaaggaacagtaatgactgat 1449

                                                        
Query: 217  gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgc 260
            || |||||||| |||||||| || || |||||||| || |||||
Sbjct: 1450 ggcaagagcaagagtcttgtggcatatcacgaagttggacatgc 1493



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                        
Query: 13   gcaacaagnaagtttgatgccgatgtttctcttgaagtcattgcaatgagaacacctggg 72
            |||||||| ||||| ||| | ||||| ||||||||||| ||||| ||||| |||||||| 
Sbjct: 1247 gcaacaag-aagttcgattcagatgtgtctcttgaagttattgccatgaggacacctggc 1305

                          
Query: 73   ttcagtggagcaga 86
            ||||||||||||||
Sbjct: 1306 ttcagtggagcaga 1319

>ref|NM_179825.1| Arabidopsis thaliana VAR2 (VARIEGATED 2); ATP-dependent peptidase/
            ATPase/ metallopeptidase/ zinc ion binding AT2G30950
            (VAR2) mRNA, complete cds
          Length = 2333

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                        
Query: 157  gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
            |||||||| || || |||||||| || || ||||| |||||||| || || ||||| |||
Sbjct: 1461 gagattgatgactccattgatagaatcgttgctggcatggaaggaacagtgatgaccgat 1520

                                                                        
Query: 217  gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgcagtttgcggaactttg 276
            || |||||||||||  | || |||||||| ||||| || |||||||| || ||||| |||
Sbjct: 1521 ggcaagagcaaaagcttggtagcttaccatgaagttggtcatgcagtgtgtggaacattg 1580

              
Query: 277  ac 278
            ||
Sbjct: 1581 ac 1582



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 34   gatgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcaga 86
            |||||||| |||||| | || ||||||||||||||||| || || ||||||||
Sbjct: 1338 gatgtttcacttgaaataatagcaatgagaacacctggatttagcggagcaga 1390

>gb|AY093791.1| Arabidopsis thaliana At2g30950/F7F1.16 mRNA, complete cds
          Length = 1020

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 157 gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
           |||||||| || || |||||||| || || ||||| |||||||| || || ||||| |||
Sbjct: 307 gagattgatgactccattgatagaatcgttgctggcatggaaggaacagtgatgaccgat 366

                                                                       
Query: 217 gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgcagtttgcggaactttg 276
           || |||||||||||  | || |||||||| ||||| || |||||||| || ||||| |||
Sbjct: 367 ggcaagagcaaaagcttggtagcttaccatgaagttggtcatgcagtgtgtggaacattg 426

             
Query: 277 ac 278
           ||
Sbjct: 427 ac 428



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 34  gatgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcaga 86
           |||||||| |||||| | || ||||||||||||||||| || || ||||||||
Sbjct: 184 gatgtttcacttgaaataatagcaatgagaacacctggatttagcggagcaga 236

>gb|AY045599.1| Arabidopsis thaliana At2g30950/F7F1.16 mRNA, complete cds
          Length = 1307

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 157 gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
           |||||||| || || |||||||| || || ||||| |||||||| || || ||||| |||
Sbjct: 477 gagattgatgactccattgatagaatcgttgctggcatggaaggaacagtgatgaccgat 536

                                                                       
Query: 217 gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgcagtttgcggaactttg 276
           || |||||||||||  | || |||||||| ||||| || |||||||| || ||||| |||
Sbjct: 537 ggcaagagcaaaagcttggtagcttaccatgaagttggtcatgcagtgtgtggaacattg 596

             
Query: 277 ac 278
           ||
Sbjct: 597 ac 598



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 34  gatgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcaga 86
           |||||||| |||||| | || ||||||||||||||||| || || ||||||||
Sbjct: 354 gatgtttcacttgaaataatagcaatgagaacacctggatttagcggagcaga 406

>gb|AF135189.1|AF135189 Arabidopsis thaliana zinc dependent protease (VAR2) mRNA, complete
            cds; nuclear gene for chloroplast product
          Length = 2271

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                        
Query: 157  gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
            |||||||| || || |||||||| || || ||||| |||||||| || || ||||| |||
Sbjct: 1429 gagattgatgactccattgatagaatcgttgctggcatggaaggaacagtgatgaccgat 1488

                                                                        
Query: 217  gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgcagtttgcggaactttg 276
            || |||||||||||  | || |||||||| ||||| || |||||||| || ||||| |||
Sbjct: 1489 ggcaagagcaaaagcttggtagcttaccatgaagttggtcatgcagtgtgtggaacattg 1548

              
Query: 277  ac 278
            ||
Sbjct: 1549 ac 1550



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 34   gatgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcaga 86
            |||||||| |||||| | || ||||||||||||||||| || || ||||||||
Sbjct: 1306 gatgtttcacttgaaataatagcaatgagaacacctggatttagcggagcaga 1358

>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete
             sequence
          Length = 89779

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                         
Query: 157   gagattgacgattcaattgataggatagtggctggtatggaagggactgtcatgacagat 216
             |||||||| || || |||||||| || || ||||| |||||||| || || ||||| |||
Sbjct: 50609 gagattgatgactccattgatagaatcgttgctggcatggaaggaacagtgatgaccgat 50668

                                                            
Query: 217   gggaagagcaaaagtcttgttgcttaccacgaagtcgggcatgcagt 263
             || |||||||||||  | || |||||||| ||||| || ||||||||
Sbjct: 50669 ggcaagagcaaaagcttggtagcttaccatgaagttggtcatgcagt 50715



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 34    gatgtttctcttgaagtcattgcaatgagaacacctgggttcagtggagcaga 86
             |||||||| |||||| | || ||||||||||||||||| || || ||||||||
Sbjct: 50486 gatgtttcacttgaaataatagcaatgagaacacctggatttagcggagcaga 50538

>dbj|AB217916.1| Lycopersicon esculentum LeftsH6 mRNA for FtsH protease, complete cds
          Length = 2213

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                        
Query: 149  cctcaaaggagattgacgattcaattgataggatagtggctggtatggaagggactgtca 208
            ||||||| ||||| || ||||| || ||||| || || ||||| |||||||| |||  ||
Sbjct: 1385 cctcaaaagagatagatgattccatcgatagaattgtcgctggaatggaaggaactacca 1444

                           
Query: 209  tgacagatgggaaga 223
            |||||||||| ||||
Sbjct: 1445 tgacagatggaaaga 1459



 Score = 46.1 bits (23), Expect = 0.067
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 52   attgcaatgagaacacctgggttcagtggagcaga 86
            ||||||||||||||||| || |||||||| |||||
Sbjct: 1288 attgcaatgagaacaccaggattcagtggtgcaga 1322

>gb|AC092274.2| Homo sapiens chromosome 5 clone CTC-537D8, complete sequence
          Length = 148579

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 157    gagattgacgattcaattgataggatagtg 186
              ||||||||| ||| ||||||||||||||||
Sbjct: 112120 gagattgaccatttaattgataggatagtg 112149

>gb|AC017092.4|AC017092 Homo sapiens BAC clone RP11-510D22 from 5, complete sequence
          Length = 180072

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 157    gagattgacgattcaattgataggatagtg 186
              ||||||||| ||| ||||||||||||||||
Sbjct: 166334 gagattgaccatttaattgataggatagtg 166305

>ref|XM_467284.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 tcgggcatgcagtttgcgga 270
           ||||||||||||||||||||
Sbjct: 333 tcgggcatgcagtttgcgga 314

>gb|AC137986.27| Medicago truncatula clone mth2-7g6, complete sequence
          Length = 128361

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    tcattgcaatgagaacacct 69
             ||||||||||||||||||||
Sbjct: 65022 tcattgcaatgagaacacct 65041

>emb|CR293504.11| Zebrafish DNA sequence from clone CH211-147G3 in linkage group 10,
             complete sequence
          Length = 165086

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   caaaagtcttgttgcttacc 244
             ||||||||||||||||||||
Sbjct: 73314 caaaagtcttgttgcttacc 73333

>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5
          Length = 349607

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agattgacgattcaattgat 177
             ||||||||||||||||||||
Sbjct: 11531 agattgacgattcaattgat 11550

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 251      tcgggcatgcagtttgcgga 270
                ||||||||||||||||||||
Sbjct: 28669448 tcgggcatgcagtttgcgga 28669467

>dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0666E12
          Length = 47765

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   tcgggcatgcagtttgcgga 270
             ||||||||||||||||||||
Sbjct: 17461 tcgggcatgcagtttgcgga 17480

>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1053A04
          Length = 144321

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    tcgggcatgcagtttgcgga 270
              ||||||||||||||||||||
Sbjct: 133461 tcgggcatgcagtttgcgga 133480

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 233    ttgttgcttaccacgaagtcgggcatgc 260
              |||| ||||||||||||||||| |||||
Sbjct: 528910 ttgtcgcttaccacgaagtcggtcatgc 528937

>emb|AL805903.12| Mouse DNA sequence from clone RP23-464N23 on chromosome 4, complete
              sequence
          Length = 136895

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tgagaacacctgggttcagt 78
              ||||||||||||||||||||
Sbjct: 101750 tgagaacacctgggttcagt 101731


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,110,730
Number of Sequences: 3902068
Number of extensions: 2110730
Number of successful extensions: 34868
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34780
Number of HSP's gapped (non-prelim): 75
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)