Clone Name | basd2f19 |
---|---|
Clone Library Name | barley_pub |
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 108 bits (271), Expect = 3e-24 Identities = 52/97 (53%), Positives = 64/97 (65%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K +V L IA RTPGF+G RR + I+ E++D+IDR+VAGMEG Sbjct: 398 KLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEG 457 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 T + D KSK L+AYHEVGHA+ GTL PGHDPV+KVTL Sbjct: 458 TPLVDSKSKRLIAYHEVGHALIGTLCPGHDPVEKVTL 494
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 108 bits (271), Expect = 3e-24 Identities = 53/97 (54%), Positives = 65/97 (67%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K +VS++ IA RTPGFSG RR ++ I+ EIDD++DR+VAGMEG Sbjct: 359 KLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEG 418 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 T + D KSK L+AYHEVGHA+ GTL HDPVQKVTL Sbjct: 419 TPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTL 455
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 108 bits (269), Expect = 4e-24 Identities = 53/97 (54%), Positives = 63/97 (64%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K D +SLE+IA RTPGFSG RR + I+ EID SIDR++AGMEG Sbjct: 360 KLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEG 419 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + D K+K L+AYHEVGHA+ GTL HDPVQKVTL Sbjct: 420 KALVDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTL 456
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 108 bits (269), Expect = 4e-24 Identities = 53/97 (54%), Positives = 65/97 (67%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K ++ VSLE IA RTPGFSG RR ++ ++ EID SIDR+VAG+EG Sbjct: 360 KMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEG 419 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 T + D KSK L+AYHEVGHA+ G+L HDPVQKVTL Sbjct: 420 TPLIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTL 456
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 107 bits (267), Expect = 8e-24 Identities = 53/97 (54%), Positives = 63/97 (64%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K DV LEVIA RTPGFSG RRG+ I+ KEI+DSID+I+AG+EG Sbjct: 358 KIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEG 417 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + + D + K L+AYHE GHAV T P HDPVQKVTL Sbjct: 418 SPLADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTL 454
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 103 bits (256), Expect = 1e-22 Identities = 52/97 (53%), Positives = 61/97 (62%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K VSLE +A RT GF+G RRG I+ KEIDD+IDR++AGMEG Sbjct: 341 KLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGMEG 400 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 T + DGK K L+AYHE GHA+ TL P H PVQKVTL Sbjct: 401 TPIMDGKIKRLIAYHETGHALTATLLPNHPPVQKVTL 437
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 85.1 bits (209), Expect = 4e-17 Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 DV L+ IA RTPGF+G RR T IS E++D+IDR++AG E V Sbjct: 352 DVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRV 411 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 M++ K K+LVAYHE GHA+ G L P +DPVQK+++ Sbjct: 412 MSE-KRKTLVAYHEAGHALVGALMPDYDPVQKISI 445
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 85.1 bits (209), Expect = 4e-17 Identities = 40/93 (43%), Positives = 57/93 (61%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEGTVMT 213 DVSL +A RTPGFSG R ++ I+ E++++ DRI+ G+ G M Sbjct: 377 DVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPME 436 Query: 214 DGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 D K+K L+AYHEVGHA+ G++ HD V+K+TL Sbjct: 437 DTKNKRLIAYHEVGHAITGSVLKSHDEVEKITL 469
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 76.6 bits (187), Expect = 1e-14 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 DV + IA RTPGF+G RR IS EI D+++RI+AG E V Sbjct: 421 DVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAV 480 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++D K K LVAYHE GHA+ G L P +DPV K+++ Sbjct: 481 VSDEKKK-LVAYHEAGHALVGALMPEYDPVAKISI 514
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 76.3 bits (186), Expect = 2e-14 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 DV E IA RTPG++G RR IS EI D+++RI+AG E V Sbjct: 444 DVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAV 503 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++D K K LVAYHE GHA+ G L P +DPV K+++ Sbjct: 504 VSDEKKK-LVAYHEAGHALVGALMPEYDPVAKISI 537
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 74.7 bits (182), Expect = 5e-14 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME-GTVM 210 DV E +A RTPGF+G RR IS EI D+++RI+AG E + Sbjct: 441 DVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAV 500 Query: 211 TDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K LVAYHE GHA+ G L P +DPV K+++ Sbjct: 501 VSEEKKRLVAYHEAGHALVGALMPEYDPVAKISI 534
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 73.9 bits (180), Expect = 9e-14 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG-TVM 210 DV + +A RTPGF+G RR IS EI D+++RI+AG E + Sbjct: 453 DVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAV 512 Query: 211 TDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K LVAYHE GHA+ G L P +DPV K+++ Sbjct: 513 VSEEKKRLVAYHEAGHALVGALMPEYDPVAKISI 546
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 73.9 bits (180), Expect = 9e-14 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG-TVM 210 DV + IA RTPGF+G RR IS EI D+++RI+AG E + Sbjct: 444 DVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKNAV 503 Query: 211 TDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K LVAYHE GHA+ G L P +DPV K+++ Sbjct: 504 VSEEKKKLVAYHEAGHALVGALMPEYDPVAKISI 537
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 71.6 bits (174), Expect = 5e-13 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME- 198 K D +V L+ IA RTPGF+G R + ++ + ++I+R+VAG+E Sbjct: 363 KLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGLEK 422 Query: 199 -GTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 V++D K K +VAYHEVGHA+ G + PG V K+++ Sbjct: 423 KSRVLSD-KEKKIVAYHEVGHALVGAVMPGGGQVAKISI 460
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 68.9 bits (167), Expect = 3e-12 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Frame = +1 Query: 37 VSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--MEGTVM 210 +SL +A RTPGFSG R RT I+ +ID++IDR++AG + V+ Sbjct: 420 ISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKSRVV 479 Query: 211 TDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +D K LVAYHE GHA+ G +D VQK+T+ Sbjct: 480 SDADRK-LVAYHEAGHALVGLHVHSNDEVQKITI 512
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 68.6 bits (166), Expect = 4e-12 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 D+ +IA TPGFSG R + +S E + + D+I+ G E V Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MT+ + +S AYHE GHA+ G L P HDPV KVT+ Sbjct: 403 MTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTI 436
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 68.6 bits (166), Expect = 4e-12 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 D+ +IA TPGFSG R + +S E + + D+I+ G E V Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MT+ + +S AYHE GHA+ G L P HDPV KVT+ Sbjct: 403 MTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTI 436
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 68.6 bits (166), Expect = 4e-12 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 D+ +IA TPGFSG R + +S E + + D+I+ G E V Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MT+ + +S AYHE GHA+ G L P HDPV KVT+ Sbjct: 403 MTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTI 436
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 68.6 bits (166), Expect = 4e-12 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 D+ +IA TPGFSG R + +S E + + D+I+ G E V Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MT+ + +S AYHE GHA+ G L P HDPV KVT+ Sbjct: 403 MTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTI 436
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 68.6 bits (166), Expect = 4e-12 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 D+ +IA TPGFSG R + +S E + + D+I+ G E V Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MT+ + +S AYHE GHA+ G L P HDPV KVT+ Sbjct: 403 MTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTI 436
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 68.6 bits (166), Expect = 4e-12 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Frame = +1 Query: 37 VSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--MEGTVM 210 +SL +A RTPGFSG R RT I+ +ID++IDR++AG + V+ Sbjct: 423 ISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAKKSRVI 482 Query: 211 TDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +D + + LVAYHE GHA+ G +D VQK+T+ Sbjct: 483 SD-EDRKLVAYHEAGHALVGLHVHSNDEVQKITI 515
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 68.2 bits (165), Expect = 5e-12 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = +1 Query: 28 DADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG-MEGT 204 D V+L+ IAMRTPGFSG R+ + I +++ID++ DR++AG + + Sbjct: 350 DETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKS 409 Query: 205 VMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K +++VAYHE GH V G + D V KVT+ Sbjct: 410 RVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTI 445
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 68.2 bits (165), Expect = 5e-12 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K DV LE +A TPGF+G R+G+ I+ +EI++++DRI G+E Sbjct: 343 KLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLER 402 Query: 202 TVMT-DGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MT K K +A HE GHA+ G ++ D V K+++ Sbjct: 403 KGMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISI 440
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG-MEGTVM 210 DV+L+ IA RTPGFSG R T IS I+++IDR++AG + + + Sbjct: 357 DVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRV 416 Query: 211 TDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 K K +VA+HE GH V G D V KVT+ Sbjct: 417 ISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTI 450
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 63.2 bits (152), Expect = 2e-10 Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEGT--V 207 DV +A TPG+SG R + ++ E + + D+I G E + Sbjct: 88 DVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMI 147 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MTD K K AYHE GHA+ G L P HDPV KVT+ Sbjct: 148 MTD-KQKESTAYHEAGHAIVGYLVPEHDPVHKVTI 181
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 63.2 bits (152), Expect = 2e-10 Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +1 Query: 49 VIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTVMTDGK 222 +IA TPGFSG R R + + + + D+I G E VMT+ K Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTE-K 406 Query: 223 SKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 K AYHE GH + G L P HDP KVT+ Sbjct: 407 QKESTAYHEAGHVIVGRLVPEHDPAHKVTI 436
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 63.2 bits (152), Expect = 2e-10 Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEGT--V 207 DV +A TPG+SG R + ++ E + + D+I G E + Sbjct: 342 DVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMI 401 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 MTD K K AYHE GHA+ G L P HDPV KVT+ Sbjct: 402 MTD-KQKESTAYHEAGHAIVGYLVPEHDPVHKVTI 435
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 62.4 bits (150), Expect = 3e-10 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEGTVMT 213 DV L+++A +TPGF G RR ++ I + +ID++ DR++AG T Sbjct: 378 DVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKT 437 Query: 214 -DGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 K + LVAYHE GH + G + V KVT+ Sbjct: 438 VSQKERELVAYHEAGHTIVGLVLSNARVVHKVTI 471
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 62.4 bits (150), Expect = 3e-10 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEGTVMT 213 DV L+++A +TPGF G RR ++ I + +ID++ DR++AG T Sbjct: 378 DVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKT 437 Query: 214 -DGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 K + LVAYHE GH + G + V KVT+ Sbjct: 438 VSQKERELVAYHEAGHTIVGLVLSNARVVHKVTI 471
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 62.0 bits (149), Expect = 4e-10 Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 DV +IA TPGFSG R + +S E + + D+++ G E V Sbjct: 343 DVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 M+D + +S AYHE GH + G L P HDP KVT+ Sbjct: 403 MSDFQKES-TAYHEAGHVIIGRLVPDHDPAHKVTI 436
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 61.2 bits (147), Expect = 6e-10 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 KFD V E+IA T GFSG G+ ++ KE++ S D+I+ G E Sbjct: 466 KFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPER 525 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +V D K+K++ AYHE GHA+ T P+ K T+ Sbjct: 526 RSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATI 563
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 61.2 bits (147), Expect = 6e-10 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 KFD V E+IA T GFSG G+ ++ KE++ S D+I+ G E Sbjct: 466 KFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPER 525 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +V D K+K++ AYHE GHA+ T P+ K T+ Sbjct: 526 RSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATI 563
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 61.2 bits (147), Expect = 6e-10 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 KFD V E+IA T GFSG G+ ++ KE++ S D+I+ G E Sbjct: 524 KFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPER 583 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +V D K+K++ AYHE GHA+ T P+ K T+ Sbjct: 584 RSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATI 621
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--M 195 + ++ + IA RTPG+SG R I S +ID++IDR++AG Sbjct: 399 RLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPAK 458 Query: 196 EGTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + V++ + K+ VAYHE GHAV G G + VQK+T+ Sbjct: 459 KSRVISQEELKA-VAYHEAGHAVVGLKVKGGNKVQKITI 496
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME--GTV 207 DV +IA TPGFSG R +S + + D+I+ G E V Sbjct: 343 DVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMV 402 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 M+D + +S AYHE GH + G L P HDP KVT+ Sbjct: 403 MSDFQKES-TAYHEAGHVIIGRLVPDHDPAHKVTI 436
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGM-E 198 K+++ V +IA TPGFSG R G+ + +++++ D+++ G+ Sbjct: 342 KYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVR 401 Query: 199 GTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++ K K L AYHE GHA+ G P P+ K T+ Sbjct: 402 RSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATI 439
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGM-E 198 K+++ V +IA TPGFSG R G+ + +++++ D+++ G+ Sbjct: 342 KYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVAR 401 Query: 199 GTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++ K K L AYHE GHA+ G P P+ K T+ Sbjct: 402 RSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATI 439
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 58.9 bits (141), Expect = 3e-09 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K +V L+ +A T G+SG R GR + ++D+++++ + G++ Sbjct: 327 KLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQK 386 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + + + + ++AYHE GHA+ GT T G D V K+T+ Sbjct: 387 KSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITI 424
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 56.2 bits (134), Expect = 2e-08 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Frame = +1 Query: 31 ADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG-MEGTV 207 +DV L +A +TPG+ G R+ + I++ +ID+ +DR +AG + Sbjct: 384 SDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDR 443 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + + + +VAYHE GHA+ G + V+KVT+ Sbjct: 444 IQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTV 478
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 55.8 bits (133), Expect = 3e-08 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K DV+L+ +A T G +G GR + + + + ++++R +AG+E Sbjct: 359 KLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEK 418 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K K +VAYHE GHAV +T G V KV++ Sbjct: 419 KSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSI 456
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 55.5 bits (132), Expect = 3e-08 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K DV L+ IA T G +G GR + + + + ++++R +AG+E Sbjct: 365 KLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEK 424 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K K +VAYHE GHAV +T G V KV++ Sbjct: 425 KSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSI 462
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 55.5 bits (132), Expect = 3e-08 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 52 IAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG-TVMTDGKSK 228 +A TPGFSG R I+ K + +I+R++ G+E T + + K Sbjct: 508 LASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEK 567 Query: 229 SLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 VAYHE GHAV G DP+ KV++ Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSI 595
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 55.5 bits (132), Expect = 3e-08 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +1 Query: 52 IAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG-TVMTDGKSK 228 +A TPGF+G R I+ + +I+R++AG+E T + + K Sbjct: 493 LATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEK 552 Query: 229 SLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 VAYHE GHAVCG DP+ KV++ Sbjct: 553 RSVAYHEAGHAVCGWFLKYADPLLKVSI 580
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 55.5 bits (132), Expect = 3e-08 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 52 IAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG-TVMTDGKSK 228 +A TPGFSG R I+ K + +I+R++ G+E T + + K Sbjct: 509 LASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEK 568 Query: 229 SLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 VAYHE GHAV G DP+ KV++ Sbjct: 569 KTVAYHEAGHAVAGWYLEHADPLLKVSI 596
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 55.5 bits (132), Expect = 3e-08 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 52 IAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG-TVMTDGKSK 228 +A TPGFSG R + + +I+R++ G+E + + + K Sbjct: 548 LAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEK 607 Query: 229 SLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +VAYHE GHAVCG DP+ KV++ Sbjct: 608 KVVAYHEAGHAVCGWYLKYADPLLKVSI 635
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 55.1 bits (131), Expect = 4e-08 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K DV+L+ +A T G +G GR + + + + ++++R +AG+E Sbjct: 359 KLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK 418 Query: 202 -TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 + K K +VAYHE GHAV +T G V KV++ Sbjct: 419 KSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSI 456
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%) Frame = +1 Query: 31 ADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--MEGT 204 AD L+ +A RT G +G R T I+ +++++DR++ G +G Sbjct: 353 ADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGR 412 Query: 205 VMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++++ + K + AYHE GH + P +P+ KVT+ Sbjct: 413 IISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTI 447
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%) Frame = +1 Query: 31 ADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--MEGT 204 AD L+ +A RT G +G R T I+ +++++DR++ G +G Sbjct: 353 ADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGR 412 Query: 205 VMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++++ + K + AYHE GH + P +P+ KVT+ Sbjct: 413 IISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTI 447
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%) Frame = +1 Query: 22 KFDADVSLEVIAMR----TPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVA 189 K D +S + ++ + TPGF+G R + + + +I+R++ Sbjct: 361 KLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIG 420 Query: 190 GMEG-TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 G+E T + K+ VAYHE GHAV G DP+ KV++ Sbjct: 421 GLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSI 462
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--MEGTV 207 D L+ +A RT G +G R I+ +++++DR++ G +G + Sbjct: 354 DADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRVIGGPRRKGRI 413 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +++ + K + AYHE GH + P +P+ KVT+ Sbjct: 414 ISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTI 447
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Frame = +1 Query: 52 IAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG-MEGTVMTDGKSK 228 +A TPGFSG R G T + + + +++R++AG + + + + + Sbjct: 509 LAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQ 568 Query: 229 SLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +VA+HE GHA+ G + + V KV++ Sbjct: 569 KVVAFHESGHALVGWMLEHTEAVMKVSI 596
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 44.3 bits (103), Expect = 8e-05 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Frame = +1 Query: 34 DVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEGT--V 207 +V +IA TPG SG ++ + + + D+I+ G E V Sbjct: 469 NVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMV 528 Query: 208 MTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 +TD K+ A+HE GHA+ T G P+ K T+ Sbjct: 529 LTDAARKA-TAFHEAGHAIMAKYTNGATPLYKATI 562
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 43.9 bits (102), Expect = 1e-04 Identities = 24/97 (24%), Positives = 43/97 (44%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGMEG 201 K +++ +E +A T G++G R + + D+ DR++ G Sbjct: 351 KTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAK 410 Query: 202 TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 D ++ + A+HE GHA+ LT P+ KVT+ Sbjct: 411 RRPLDDQTNRVSAFHEAGHALVALLTADSIPLHKVTI 447
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 38.1 bits (87), Expect = 0.006 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%) Frame = +1 Query: 46 EVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAG--MEGTVMTDG 219 +V+A + GF+G ++ +D++ DR++ G G + D Sbjct: 394 KVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDE 453 Query: 220 KSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 ++ AYHE GH + T P+ KVT+ Sbjct: 454 EANRNTAYHEAGHTLVSLYTKDATPLHKVTI 484
>CZF1_CANAL (P28875) Zinc finger protein 1| Length = 388 Score = 31.2 bits (69), Expect = 0.69 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -1 Query: 147 NSGPP-TSAC*YGCLV--QKIRQVCSTEPRCSHCNDFKRN 37 NSG P T GCL Q+ ++ C T PRC+ C + N Sbjct: 305 NSGKPITKRSRMGCLTCRQRKKRCCETRPRCTECTRLRLN 344
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 31.2 bits (69), Expect = 0.69 Identities = 18/66 (27%), Positives = 28/66 (42%) Frame = +1 Query: 1 GCTVATXKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 180 G K DV LE IA T GFSG RRG I+ ++ ++++ Sbjct: 320 GIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEK 379 Query: 181 IVAGME 198 + A ++ Sbjct: 380 VKAALD 385
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 162 + D D+ LE IA +T G+SG RR G+S +EI Sbjct: 396 ELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 162 + D DV LE IA +T G+SG RR G+S +EI Sbjct: 396 ELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442
>RPOC1_SINAL (P46819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 688 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDRNFLK 155 EN+ V+W +LGE G+ WEDR ++ Sbjct: 221 ENSLVEWKQLGEEGPTGNE-----WEDRKIVR 247
>RPOC1_ARATH (P56763) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 680 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDRNFLK 155 EN+ V+W +LGE G+ WEDR ++ Sbjct: 213 ENSLVEWKQLGEEGPTGNE-----WEDRKIVR 239
>PRIA_LENED (Q01200) Protein priA precursor| Length = 258 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +3 Query: 183 SGWYGRDCHDRWEEQKSCCLPRSRACSLRNFDAWPRPRPEGHP 311 +GWY W ++K+CCLP+ WP P P Sbjct: 81 NGWY-------WNDEKTCCLPK-----------WPTSTPTPTP 105
>K0247_HUMAN (Q92537) Protein KIAA0247 precursor| Length = 303 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +1 Query: 175 DRIVAGMEGTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDPVQKVTL 312 D+ V+G + ++M DG +L +Y E + G P DP ++ L Sbjct: 155 DQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVL 200
>LFTR_XANAC (Q8PL03) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)| (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) Length = 249 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 Query: 187 AGMEGTVMTDGKSKSLVAYHEVGHA 261 AG +GT +T ++ +A HE+GHA Sbjct: 112 AGQDGTWITAQMQQAYIALHELGHA 136
>OR2L2_HUMAN (Q8NH16) Olfactory receptor 2L2 (HTPCRH07)| Length = 312 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 292 GRGQASKFRKLHARLRGKQQDFCSSHLS*QSLPYQPLSYQLNRQSPLR 149 GR + +R A R K CS+HL+ S Y P +Y R LR Sbjct: 218 GRVLLAVYRMHSAEGRKKAYSTCSTHLTVVSFYYAPFAYTYVRPRSLR 265
>RPOC1_NICTO (Q33C47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 681 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDR 143 EN+ V+W LGE G+ WEDR Sbjct: 213 ENSLVEWEELGEEGHTGNE-----WEDR 235
>RPOC1_NICSY (Q3C1G8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 681 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDR 143 EN+ V+W LGE G+ WEDR Sbjct: 213 ENSLVEWEELGEEGHTGNE-----WEDR 235
>RPOC1_ATRBE (Q8S8Y0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 681 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDR 143 EN+ V+W LGE G+ WEDR Sbjct: 213 ENSLVEWEELGEEGHTGNE-----WEDR 235
>RPOC1_TOBAC (P12116) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 680 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDR 143 EN+ V+W LGE G+ WEDR Sbjct: 212 ENSLVEWEELGEEGHTGNE-----WEDR 234
>TLR1_MOUSE (Q9EPQ1) Toll-like receptor 1 precursor (Toll/interleukin-1| receptor-like protein) (TIL) (CD281 antigen) Length = 795 Score = 27.3 bits (59), Expect = 10.0 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +3 Query: 48 SHCNENTWVQWSRLGESSERGSHISRPTWEDRNFLKGD*RFN**DSGWYGRDCHDRWEEQ 227 SH +E+ + + S G++ + T E R+F+K + GW R+ + W + Sbjct: 506 SHPSEDFFQSCQNI-RSLTAGNNPFQCTCELRDFVK--------NIGWVAREVVEGWPDS 556 Query: 228 KSCCLPR-SRACSLRNFDAWP 287 C P SR +LR+F P Sbjct: 557 YRCDYPESSRGTALRDFHMSP 577
>RPOC1_SOLTU (Q2VEI5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 687 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 60 ENTWVQWSRLGESSERGSHISRPTWEDR 143 EN+ V+W LGE G+ WEDR Sbjct: 219 ENSLVEWEELGEEGHTGNE-----WEDR 241
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +1 Query: 22 KFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 162 + D D+ LE IA + G+SG RR G+S +EI Sbjct: 398 ELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI 444
>DMDB_DROME (Q9VDW3) Dystrophin, isoform B| Length = 1669 Score = 27.3 bits (59), Expect = 10.0 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 209 MTVPSIPATXXXXXXXXXXXXIPVLPRRPANMAASFRRFAKSAPL 75 M VP +P T P LPR+PA+ +S + A+S+PL Sbjct: 114 MMVPGLPPTMRQP---------PPLPRKPASTQSSAQNSAQSSPL 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,055,557 Number of Sequences: 219361 Number of extensions: 924309 Number of successful extensions: 2581 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 2491 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2543 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)