ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2h19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1183 bits (597), Expect = 0.0 Identities = 603/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119963 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 119904 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119903 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119844 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119843 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119784 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119783 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119724 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119723 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119664 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119663 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119604 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119603 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119544 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119543 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119484 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119483 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 119424 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119423 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 119364 Query: 601 tatcc 605 ||||| Sbjct: 119363 tatcc 119359 Score = 1183 bits (597), Expect = 0.0 Identities = 603/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94931 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 94990 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94991 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95050 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95051 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95110 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95111 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95170 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95171 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95230 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95231 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95290 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95291 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95350 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95351 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95410 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 95470 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95471 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95530 Query: 601 tatcc 605 ||||| Sbjct: 95531 tatcc 95535
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118744 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 118685 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118684 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 118625 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118624 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 118565 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118564 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 118505 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118504 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 118445 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118444 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 118385 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118384 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 118325 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118324 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 118265 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118264 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 118205 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 118204 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 118145 Query: 601 tatcc 605 ||||| Sbjct: 118144 tatcc 118140
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119828 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119769 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119768 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119709 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119708 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119649 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119648 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119589 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119588 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119529 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119469 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119409 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119408 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119349 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119348 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 119289 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119288 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 119229 Query: 601 tatcc 605 ||||| Sbjct: 119228 tatcc 119224 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95328 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95387 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95447 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95507 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95508 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95567 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95568 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95627 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95687 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95747 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95807 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95808 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 95867 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95868 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 95927 Query: 601 tatcc 605 ||||| Sbjct: 95928 tatcc 95932
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119828 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119769 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119768 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119709 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119708 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119649 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119648 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119589 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119588 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119529 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119469 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119409 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119408 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119349 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119348 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 119289 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119288 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 119229 Query: 601 tatcc 605 ||||| Sbjct: 119228 tatcc 119224 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95328 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95387 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95447 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95507 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95508 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95567 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95568 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95627 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95687 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95747 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95807 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95808 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 95867 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95868 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 95927 Query: 601 tatcc 605 ||||| Sbjct: 95928 tatcc 95932
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119777 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119718 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119717 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119658 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119657 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119598 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119597 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119538 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119537 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119478 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119477 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119418 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119417 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119358 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119357 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119298 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119297 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 119238 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119237 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 119178 Query: 601 tatcc 605 ||||| Sbjct: 119177 tatcc 119173 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95273 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95332 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95333 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95392 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95393 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95452 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95453 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95512 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95513 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95572 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95573 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95632 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95633 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95692 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95693 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95752 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95753 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 95812 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95813 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 95872 Query: 601 tatcc 605 ||||| Sbjct: 95873 tatcc 95877
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31507906 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 31507965 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507966 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 31508025 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508026 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 31508085 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508086 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 31508145 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31508146 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 31508205 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508206 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 31508265 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508266 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 31508325 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508326 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 31508385 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508386 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 31508445 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31508446 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 31508505 Query: 601 tatcc 605 ||||| Sbjct: 31508506 tatcc 31508510
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84690 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 84631 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84630 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 84571 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84570 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 84511 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84510 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 84451 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84450 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 84391 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84390 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 84331 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84330 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 84271 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84270 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 84211 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84210 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 84151 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 84150 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 84091 Query: 601 tatcc 605 ||||| Sbjct: 84090 tatcc 84086
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119797 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119738 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119737 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119678 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119618 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119617 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119558 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119557 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119498 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119438 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119437 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119378 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119377 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119318 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119317 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 119258 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119257 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 119198 Query: 601 tatcc 605 ||||| Sbjct: 119197 tatcc 119193 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95321 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95380 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95381 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95440 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95441 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95500 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95501 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95560 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95561 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95620 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95621 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95680 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95681 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95740 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95741 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95800 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 95860 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95861 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 95920 Query: 601 tatcc 605 ||||| Sbjct: 95921 tatcc 95925
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 58516 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 58457 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58456 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 58397 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58396 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 58337 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58336 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 58277 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 58276 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 58217 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58216 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 58157 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58156 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 58097 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58096 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 58037 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58036 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 57977 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 57976 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 57917 Query: 601 tatcc 605 ||||| Sbjct: 57916 tatcc 57912
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9268255 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9268314 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268315 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9268374 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268375 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9268434 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268435 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9268494 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9268495 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9268554 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268555 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9268614 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268615 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9268674 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268675 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9268734 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268735 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 9268794 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9268795 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 9268854 Query: 601 tatcc 605 ||||| Sbjct: 9268855 tatcc 9268859 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9227755 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9227814 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227815 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9227874 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227875 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9227934 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227935 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9227994 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9227995 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9228054 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228055 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9228114 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228115 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9228174 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228175 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9228234 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228235 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 9228294 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 9228295 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctaggtgatc 9228354 Query: 601 tatcc 605 ||||| Sbjct: 9228355 tatcc 9228359 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9056169 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9056228 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056229 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9056288 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056289 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9056348 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056349 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9056408 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9056409 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcct 9056468 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056469 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9056528 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056529 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9056588 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056589 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9056648 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056649 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 9056708 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9056709 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 9056768 Query: 601 tatcc 605 ||||| Sbjct: 9056769 tatcc 9056773 Score = 1144 bits (577), Expect = 0.0 Identities = 599/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9164344 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9164403 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164404 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9164463 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164464 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9164523 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164524 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9164583 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9164584 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9164643 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164644 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9164703 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164704 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9164763 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164764 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9164823 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164824 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 9164883 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 9164884 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga-actaggtgatc 9164942 Query: 601 tatcc 605 ||||| Sbjct: 9164943 tatcc 9164947 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 344 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 403 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 404 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19938240 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 19938299 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938300 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 19938359 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938360 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 19938419 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938420 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 19938479 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19938480 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 19938539 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938540 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 19938599 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938600 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 19938659 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938660 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 19938719 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938720 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 19938779 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 19938780 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 19938839 Query: 601 tatcc 605 ||||| Sbjct: 19938840 tatcc 19938844 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10277191 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10277132 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277131 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10277072 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277071 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10277012 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277011 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10276952 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10276951 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10276892 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276891 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10276832 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276831 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 10276772 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276771 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10276712 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276711 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 10276652 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10276651 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 10276592 Query: 601 tatcc 605 ||||| Sbjct: 10276591 tatcc 10276587 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10387107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10387166 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10387226 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10387286 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387287 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10387346 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10387347 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10387406 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387407 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10387466 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10387467 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 10387526 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387527 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10387586 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387587 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 10387646 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10387647 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 10387706 Query: 601 tatcc 605 ||||| Sbjct: 10387707 tatcc 10387711 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 362 agtaccgtgagggaaaggtgaaaagaacccc 392 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 ttgtgctgctaggcgaagcggttgagtgc 215 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31598422 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 31598481 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598482 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 31598541 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598542 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 31598601 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598602 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 31598661 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31598662 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 31598721 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598722 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 31598781 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598782 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 31598841 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598842 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 31598901 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598902 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 31598961 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31598962 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 31599021 Query: 601 tatcc 605 ||||| Sbjct: 31599022 tatcc 31599026
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33525738 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 33525797 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525798 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 33525857 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525858 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 33525917 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525918 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 33525977 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33525978 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 33526037 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526038 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 33526097 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526098 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 33526157 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526158 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 33526217 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526218 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 33526277 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33526278 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 33526337 Query: 601 tatcc 605 ||||| Sbjct: 33526338 tatcc 33526342 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 366 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 425 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 426 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 485 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 486 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 380 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 439 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 440 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 489 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 373 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 411 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 47803 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 47744 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47743 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 47684 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47683 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 47624 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47623 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 47564 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 47563 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 47504 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47503 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 47444 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47443 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 47384 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47383 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 47324 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47323 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 47264 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 47263 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 47204 Query: 601 tatcc 605 ||||| Sbjct: 47203 tatcc 47199
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 70935 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 70994 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70995 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 71054 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71055 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 71114 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71115 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 71174 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 71175 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 71234 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71235 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 71294 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71295 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 71354 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71355 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 71414 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71415 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 71474 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 71475 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 71534 Query: 601 tatcc 605 ||||| Sbjct: 71535 tatcc 71539 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 166 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 286 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 346 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 347 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 406 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 466 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 526 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 586 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 646 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 647 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 706 Query: 601 tatcc 605 ||||| Sbjct: 707 tatcc 711
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 73 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 133 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 193 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 253 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 254 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 313 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 373 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 433 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 493 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 553 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 554 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 613 Query: 601 tatcc 605 ||||| Sbjct: 614 tatcc 618
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19949516 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 19949575 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949576 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 19949635 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949636 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 19949695 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949696 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 19949755 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19949756 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 19949815 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949816 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 19949875 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949876 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 19949935 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949936 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 19949995 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949996 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 19950055 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 19950056 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 19950115 Query: 601 tatcc 605 ||||| Sbjct: 19950116 tatcc 19950120 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10283230 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10283171 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283170 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10283111 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283110 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10283051 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283050 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10282991 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10282990 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10282931 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282930 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10282871 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282870 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 10282811 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282810 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10282751 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282750 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 10282691 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10282690 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 10282631 Query: 601 tatcc 605 ||||| Sbjct: 10282630 tatcc 10282626 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10393146 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10393205 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393206 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10393265 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393266 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10393325 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393326 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10393385 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10393386 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10393445 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393446 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10393505 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10393506 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 10393565 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393566 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10393625 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393626 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 10393685 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10393686 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 10393745 Query: 601 tatcc 605 ||||| Sbjct: 10393746 tatcc 10393750 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 ttgtgctgctaggcgaagcggttgagtgc 215 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119771 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119712 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119711 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119652 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119651 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119592 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119591 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119532 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119531 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119472 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119412 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119411 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119352 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119351 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119292 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119291 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 119232 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119231 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 119172 Query: 601 tatcc 605 ||||| Sbjct: 119171 tatcc 119167 Score = 1168 bits (589), Expect = 0.0 Identities = 601/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95268 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95327 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95328 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95387 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95447 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95507 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95508 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95567 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95568 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95627 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95687 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95747 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 95807 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95808 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 95867 Query: 601 tatcc 605 ||||| Sbjct: 95868 tatcc 95872
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 874 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 815 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 755 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 695 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 635 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 634 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 575 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 515 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 455 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 395 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 394 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 335 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 334 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 275 Query: 601 tatcc 605 ||||| Sbjct: 274 tatcc 270
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14095 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 14154 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14155 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 14214 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14215 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 14274 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14275 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 14334 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 14335 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcct 14394 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14395 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 14454 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14455 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 14514 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14515 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 14574 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14575 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 14634 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 14635 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 14694 Query: 601 tatcc 605 ||||| Sbjct: 14695 tatcc 14699 Score = 1144 bits (577), Expect = 0.0 Identities = 599/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122370 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 122429 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122430 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 122489 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122490 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 122549 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122550 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 122609 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122610 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 122669 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122670 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 122729 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122730 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 122789 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122790 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 122849 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122850 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 122909 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 122910 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga-actaggtgatc 122968 Query: 601 tatcc 605 ||||| Sbjct: 122969 tatcc 122973
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 140903 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 140962 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140963 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 141022 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141023 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 141082 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141083 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 141142 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 141143 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcct 141202 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141203 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 141262 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141263 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 141322 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141323 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 141382 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141383 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 141442 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141443 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 141502 Query: 601 tatcc 605 ||||| Sbjct: 141503 tatcc 141507
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 93499 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 93558 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93559 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 93618 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93619 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 93678 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93679 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 93738 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 93739 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 93798 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93799 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 93858 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 93859 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 93918 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93919 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 93978 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93979 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 94038 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 94039 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 94098 Query: 601 tatcc 605 ||||| Sbjct: 94099 tatcc 94103
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 20330 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 20389 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20390 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 20449 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20450 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 20509 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20510 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 20569 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 20570 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 20629 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 20689 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 20749 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 20809 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 20810 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 20869 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 20870 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 20929 Query: 601 tatcc 605 ||||| Sbjct: 20930 tatcc 20934 Score = 1144 bits (577), Expect = 0.0 Identities = 598/605 (98%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 44788 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 44729 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44728 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 44669 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44668 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 44609 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44608 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 44549 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 44548 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 44489 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44488 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 44429 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44428 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 44369 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44368 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 44309 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 44308 aatgagccggcgactcataggcagtggcttggttaagggaatggaaccctccggagccgt 44249 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 44248 agtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 44189 Query: 601 tatcc 605 ||||| Sbjct: 44188 tatcc 44184
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1417 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 1358 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1357 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 1298 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 1238 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 1178 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1177 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 1118 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 1058 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 998 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 938 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 937 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 878 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 877 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 818 Query: 601 tatcc 605 ||||| Sbjct: 817 tatcc 813
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27563 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 27622 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27623 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 27682 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27683 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 27742 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27743 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 27802 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27803 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 27862 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27863 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 27922 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 27923 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 27982 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27983 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 28042 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28043 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 28102 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 28103 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 28162 Query: 601 tatcc 605 ||||| Sbjct: 28163 tatcc 28167
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123627 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 123568 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123567 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 123508 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123507 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 123448 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123447 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 123388 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123387 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 123328 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123327 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 123268 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123267 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 123208 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123207 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 123148 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 123147 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 123088 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123087 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 123028 Query: 601 tatcc 605 ||||| Sbjct: 123027 tatcc 123023 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99210 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 99269 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99270 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 99329 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99330 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 99389 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99390 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 99449 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99450 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 99509 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99510 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 99569 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99570 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 99629 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99630 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 99689 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 99690 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 99749 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99750 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 99809 Query: 601 tatcc 605 ||||| Sbjct: 99810 tatcc 99814
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 69 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 129 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 189 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 249 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 250 tagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtggaatccc 309 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 369 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 429 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 489 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 549 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 550 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 609 Query: 601 tatcc 605 ||||| Sbjct: 610 tatcc 614
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 124344 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 124285 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124284 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 124225 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124224 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 124165 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124164 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 124105 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 124104 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 124045 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124044 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 123985 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123984 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 123925 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123924 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 123865 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 123864 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 123805 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123804 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 123745 Query: 601 tatcc 605 ||||| Sbjct: 123744 tatcc 123740 Score = 1160 bits (585), Expect = 0.0 Identities = 600/605 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99887 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 99946 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99947 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 100006 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100007 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 100066 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100067 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 100126 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 100127 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 100186 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100187 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 100246 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100247 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 100306 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100307 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 100366 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 100367 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 100426 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 100427 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 100486 Query: 601 tatcc 605 ||||| Sbjct: 100487 tatcc 100491
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1152 bits (581), Expect = 0.0 Identities = 599/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9242026 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9241967 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241966 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9241907 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241906 tagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9241847 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241846 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9241787 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9241786 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9241727 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241726 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9241667 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241666 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9241607 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241606 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9241547 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241546 aatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 9241487 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9241486 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 9241427 Query: 601 tatcc 605 ||||| Sbjct: 9241426 tatcc 9241422 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 69 actgaaacatcttagtagccagaggaaaagaaag 102 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1152 bits (581), Expect = 0.0 Identities = 599/605 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 53239 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 53180 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53179 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 53120 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53119 tagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 53060 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53059 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 53000 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 52999 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 52940 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52939 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 52880 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52879 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 52820 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52819 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 52760 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52759 aatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 52700 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 52699 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 52640 Query: 601 tatcc 605 ||||| Sbjct: 52639 tatcc 52635
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1112 bits (561), Expect = 0.0 Identities = 595/605 (98%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 123566 attcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaa 123507 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123506 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 123447 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123446 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaata 123387 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123386 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccag 123327 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123326 tagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatccc 123268 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123267 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 123208 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123207 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 123148 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123147 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 123088 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 123087 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 123028 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123027 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 122968 Query: 601 tatcc 605 ||||| Sbjct: 122967 tatcc 122963 Score = 1112 bits (561), Expect = 0.0 Identities = 595/605 (98%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 99171 attcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaa 99230 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99231 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 99290 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99291 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaata 99350 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99351 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccag 99410 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99411 tagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatccc 99469 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99470 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 99529 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99530 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 99589 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99590 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 99649 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 99650 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 99709 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99710 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 99769 Query: 601 tatcc 605 ||||| Sbjct: 99770 tatcc 99774
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1112 bits (561), Expect = 0.0 Identities = 595/605 (98%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 5524 attcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaa 5583 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5584 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 5643 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5644 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaata 5703 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5704 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccag 5763 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5764 tagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatccc 5822 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5823 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 5882 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5883 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 5942 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5943 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 6002 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 6003 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 6062 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6063 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 6122 Query: 601 tatcc 605 ||||| Sbjct: 6123 tatcc 6127
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1112 bits (561), Expect = 0.0 Identities = 595/605 (98%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 112 attcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaa 171 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 231 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 232 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaata 291 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 292 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccag 351 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 352 tagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatccc 410 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 470 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 530 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 590 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 591 aatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgt 650 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 651 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 710 Query: 601 tatcc 605 ||||| Sbjct: 711 tatcc 715
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1021 bits (515), Expect = 0.0 Identities = 521/523 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 163 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 223 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 283 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 343 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 344 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 403 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 463 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 523 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 583 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacg 523 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 aatgagccggcgactcataggcagtggcttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1003 bits (506), Expect = 0.0 Identities = 518/522 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 123 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 183 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 184 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagta 243 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 303 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 304 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 363 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 423 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 483 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 484 cgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaag 543 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaac 522 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 aatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 983 bits (496), Expect = 0.0 Identities = 505/508 (99%) Strand = Plus / Plus Query: 98 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 158 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 218 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 277 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 278 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 338 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 398 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 480 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 481 tatggacccgaacctgggtgatctatcc 508
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 979 bits (494), Expect = 0.0 Identities = 503/506 (99%) Strand = Plus / Plus Query: 100 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 160 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 220 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 279 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 280 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 340 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 400 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 520 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 579 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 580 tggacccgaccctgggtgatctatcc 605 ||||||||| |||||||||||||||| Sbjct: 481 tggacccgaacctgggtgatctatcc 506
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 979 bits (494), Expect = 0.0 Identities = 503/506 (99%) Strand = Plus / Plus Query: 100 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 160 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 220 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 279 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 280 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 340 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 400 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 520 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 579 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 580 tggacccgaccctgggtgatctatcc 605 ||||||||| |||||||||||||||| Sbjct: 481 tggacccgaacctgggtgatctatcc 506
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 977 bits (493), Expect = 0.0 Identities = 502/505 (99%) Strand = Plus / Plus Query: 101 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 161 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 221 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 280 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 281 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 341 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 401 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 521 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 580 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 480 Query: 581 ggacccgaccctgggtgatctatcc 605 |||||||| |||||||||||||||| Sbjct: 481 ggacccgaacctgggtgatctatcc 505
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 977 bits (493), Expect = 0.0 Identities = 502/505 (99%) Strand = Plus / Plus Query: 101 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 161 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 221 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 280 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 281 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 341 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 401 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 521 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 580 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 581 ggacccgaccctgggtgatctatcc 605 |||||||| |||||||||||||||| Sbjct: 484 ggacccgaacctgggtgatctatcc 508
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 973 bits (491), Expect = 0.0 Identities = 500/503 (99%) Strand = Plus / Plus Query: 103 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 163 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 223 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 282 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 283 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 343 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 403 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 463 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 523 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 582 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 480 Query: 583 acccgaccctgggtgatctatcc 605 |||||| |||||||||||||||| Sbjct: 481 acccgaacctgggtgatctatcc 503
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 25 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 85 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 145 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 205 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 264 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 265 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 325 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 385 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 445 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 505 tggcttggtt 514 |||||||||| Sbjct: 481 tggcttggtt 490
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 950 bits (479), Expect = 0.0 Identities = 575/605 (95%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 134114 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 134056 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134055 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 133996 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133995 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 133936 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||| Sbjct: 133935 caagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccag 133876 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133875 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 133816 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133815 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 133756 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 133755 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 133696 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 133695 cg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 133639 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 133638 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 133584 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133583 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 133524 Query: 601 tatcc 605 ||||| Sbjct: 133523 tatcc 133519 Score = 950 bits (479), Expect = 0.0 Identities = 575/605 (95%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 103857 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 103915 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103916 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 103975 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103976 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104035 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||| Sbjct: 104036 caagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccag 104095 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104096 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 104155 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104156 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104215 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104216 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104275 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104276 cg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 104332 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104333 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 104387 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104388 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 104447 Query: 601 tatcc 605 ||||| Sbjct: 104448 tatcc 104452
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 934 bits (471), Expect = 0.0 Identities = 573/605 (94%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 139477 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 139419 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139418 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 139359 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139358 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 139299 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||| Sbjct: 139298 caagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccag 139239 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139238 tagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 139179 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139178 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 139119 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 139118 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 139059 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 139058 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 139002 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 139001 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccat 138947 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 138946 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 138887 Query: 601 tatcc 605 ||||| Sbjct: 138886 tatcc 138882 Score = 934 bits (471), Expect = 0.0 Identities = 573/605 (94%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 110468 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 110526 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110527 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 110586 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110587 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 110646 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||| Sbjct: 110647 caagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccag 110706 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110707 tagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 110766 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110767 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 110826 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 110827 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 110886 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 110887 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 110943 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 110944 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccat 110998 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 110999 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 111058 Query: 601 tatcc 605 ||||| Sbjct: 111059 tatcc 111063
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 934 bits (471), Expect = 0.0 Identities = 573/605 (94%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 127755 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 127697 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127696 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 127637 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127636 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 127577 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 127576 caagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 127517 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127516 tagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 127457 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127456 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 127397 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 127396 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 127337 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 127336 cgtg---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 127280 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 127279 aatgagccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgt 127225 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 127224 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 127165 Query: 601 tatcc 605 ||||| Sbjct: 127164 tatcc 127160 Score = 934 bits (471), Expect = 0.0 Identities = 573/605 (94%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 107167 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 107225 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107226 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 107285 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107286 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 107345 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 107346 caagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 107405 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107406 tagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 107465 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107466 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 107525 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 107526 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 107585 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107586 cgtg---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 107642 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 107643 aatgagccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgt 107697 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107698 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 107757 Query: 601 tatcc 605 ||||| Sbjct: 107758 tatcc 107762
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 926 bits (467), Expect = 0.0 Identities = 572/605 (94%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 141999 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 141941 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141940 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 141881 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141880 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 141821 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||| Sbjct: 141820 caagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccag 141761 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141760 taaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 141701 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141700 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 141641 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 141640 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 141581 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 141580 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 141524 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141523 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 141469 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 141468 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 141409 Query: 601 tatcc 605 ||||| Sbjct: 141408 tatcc 141404 Score = 926 bits (467), Expect = 0.0 Identities = 572/605 (94%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 111658 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 111716 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111717 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 111776 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111777 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 111836 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||| Sbjct: 111837 caagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccag 111896 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111897 taaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 111956 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111957 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 112016 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 112017 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 112076 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 112077 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 112133 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112134 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 112188 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 112189 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 112248 Query: 601 tatcc 605 ||||| Sbjct: 112249 tatcc 112253
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 924 bits (466), Expect = 0.0 Identities = 572/605 (94%), Gaps = 13/605 (2%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 134872 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 134814 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134813 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 134754 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134753 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 134694 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||| Sbjct: 134693 caagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccag 134634 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 134633 tagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatccc 134574 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134573 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 134514 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 134513 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 134454 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134453 cg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaag 134401 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134400 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 134346 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 134345 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 134286 Query: 601 tatcc 605 ||||| Sbjct: 134285 tatcc 134281 Score = 924 bits (466), Expect = 0.0 Identities = 572/605 (94%), Gaps = 13/605 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105410 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105468 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105469 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105528 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105529 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105588 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||| Sbjct: 105589 caagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccag 105648 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 105649 tagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatccc 105708 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105709 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 105768 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 105769 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 105828 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 105829 cg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaag 105881 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105882 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 105936 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 105937 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 105996 Query: 601 tatcc 605 ||||| Sbjct: 105997 tatcc 106001
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 920 bits (464), Expect = 0.0 Identities = 572/605 (94%), Gaps = 11/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 136482 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 136424 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136423 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136364 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136363 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136304 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 136303 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 136244 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136243 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 136184 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136183 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 136124 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 136123 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 136064 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 136063 cg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaag 136009 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 136008 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 135954 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 135953 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 135894 Query: 601 tatcc 605 ||||| Sbjct: 135893 tatcc 135889 Score = 920 bits (464), Expect = 0.0 Identities = 572/605 (94%), Gaps = 11/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 105943 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 106001 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106002 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106061 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106062 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106121 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 106122 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 106181 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106182 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 106241 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106242 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 106301 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 106302 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 106361 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 106362 cg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaag 106416 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106417 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 106471 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 106472 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 106531 Query: 601 tatcc 605 ||||| Sbjct: 106532 tatcc 106536
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 908 bits (458), Expect = 0.0 Identities = 570/604 (94%), Gaps = 10/604 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 132889 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 132831 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132830 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132771 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132770 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 132711 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 132710 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 132651 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132650 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 132591 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132590 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 132531 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 132530 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 132471 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 132470 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 132415 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 132414 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 132360 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 132359 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 132300 Query: 601 tatc 604 |||| Sbjct: 132299 tatc 132296 Score = 908 bits (458), Expect = 0.0 Identities = 570/604 (94%), Gaps = 10/604 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 103875 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 103933 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103934 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 103993 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103994 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104053 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 104054 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 104113 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104114 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 104173 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104174 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104233 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104234 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104293 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 104294 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 104349 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104350 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 104404 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 104405 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 104464 Query: 601 tatc 604 |||| Sbjct: 104465 tatc 104468
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 902 bits (455), Expect = 0.0 Identities = 570/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 132666 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 132608 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132607 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132548 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132547 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 132488 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 132487 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 132428 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132427 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 132368 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132367 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 132308 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 132307 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 132248 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 132247 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 132192 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 132191 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 132137 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 132136 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 132077 Query: 601 tatcc 605 ||||| Sbjct: 132076 tatcc 132072 Score = 902 bits (455), Expect = 0.0 Identities = 570/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 104212 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 104270 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104271 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 104330 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104331 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104390 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 104391 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 104450 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104451 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 104510 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104511 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104570 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104571 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104630 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 104631 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 104686 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104687 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 104741 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 104742 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 104801 Query: 601 tatcc 605 ||||| Sbjct: 104802 tatcc 104806
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 902 bits (455), Expect = 0.0 Identities = 570/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 132659 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 132601 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132600 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132541 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132540 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 132481 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 132480 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 132421 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132420 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 132361 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132360 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 132301 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 132300 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 132241 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 132240 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 132185 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 132184 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 132130 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 132129 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 132070 Query: 601 tatcc 605 ||||| Sbjct: 132069 tatcc 132065 Score = 902 bits (455), Expect = 0.0 Identities = 570/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 104210 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 104268 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104269 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 104328 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104329 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104388 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 104389 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 104448 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104449 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 104508 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104509 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104568 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104569 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104628 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 104629 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 104684 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104685 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 104739 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 104740 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 104799 Query: 601 tatcc 605 ||||| Sbjct: 104800 tatcc 104804
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 900 bits (454), Expect = 0.0 Identities = 569/604 (94%), Gaps = 10/604 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 133850 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 133792 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133791 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 133732 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133731 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaa 133672 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 133671 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 133612 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133611 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 133552 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133551 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 133492 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 133491 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 133432 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 133431 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 133376 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 133375 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 133321 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 133320 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 133261 Query: 601 tatc 604 |||| Sbjct: 133260 tatc 133257 Score = 900 bits (454), Expect = 0.0 Identities = 569/604 (94%), Gaps = 10/604 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 104799 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 104857 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104858 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 104917 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104918 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaa 104977 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 104978 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 105037 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105038 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 105097 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105098 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 105157 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 105158 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 105217 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 105218 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 105273 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105274 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 105328 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 105329 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 105388 Query: 601 tatc 604 |||| Sbjct: 105389 tatc 105392
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 894 bits (451), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 131558 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 131500 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131499 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 131440 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131439 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 131380 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 131379 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 131320 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131319 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 131260 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131259 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 131200 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 131199 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 131140 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 131139 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 131084 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131083 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 131029 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 131028 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 130969 Query: 601 tatcc 605 ||||| Sbjct: 130968 tatcc 130964 Score = 894 bits (451), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 103077 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 103135 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103136 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 103195 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103196 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 103255 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 103256 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 103315 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103316 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 103375 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103376 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 103435 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 103436 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 103495 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 103496 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 103551 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 103552 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 103606 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 103607 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 103666 Query: 601 tatcc 605 ||||| Sbjct: 103667 tatcc 103671
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 892 bits (450), Expect = 0.0 Identities = 568/604 (94%), Gaps = 10/604 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 108 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 166 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaa 286 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 287 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 346 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 tagccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 406 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 466 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 467 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 526 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 527 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 582 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 583 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 637 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 638 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 697 Query: 601 tatc 604 |||| Sbjct: 698 tatc 701
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 886 bits (447), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 140251 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 140193 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140192 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 140133 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140132 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 140073 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||| Sbjct: 140072 caagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccag 140013 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 140012 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 139953 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139952 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 139893 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 139892 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 139833 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | || ||||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 139832 cg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaag 139777 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 139776 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 139722 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 139721 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 139662 Query: 601 tatcc 605 ||||| Sbjct: 139661 tatcc 139657 Score = 886 bits (447), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 109809 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 109867 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109868 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 109927 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109928 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 109987 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||| Sbjct: 109988 caagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccag 110047 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110048 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 110107 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110108 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 110167 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 110168 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 110227 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | || ||||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 110228 cg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaag 110283 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 110284 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 110338 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 110339 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 110398 Query: 601 tatcc 605 ||||| Sbjct: 110399 tatcc 110403
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 886 bits (447), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 476 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 591 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 592 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 646 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 647 agcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatc 706 Query: 601 tatcc 605 ||||| Sbjct: 707 tatcc 711
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 136191 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 136133 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136132 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136073 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136072 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136013 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 136012 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 135953 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135952 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 135893 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135892 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135833 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135832 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135773 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135772 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135718 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135717 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 135663 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 135662 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 135603 Query: 600 ctatcc 605 |||||| Sbjct: 135602 ctatcc 135597 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106439 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106497 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106557 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106558 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106617 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 106618 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 106677 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106678 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 106737 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106738 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106797 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106798 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106857 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106858 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106912 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106913 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106967 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106968 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 107027 Query: 600 ctatcc 605 |||||| Sbjct: 107028 ctatcc 107033
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 136829 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 136771 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136770 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136711 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136710 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136651 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 136650 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 136591 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136590 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 136531 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136530 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 136471 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 136470 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 136411 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 136410 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 136356 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136355 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 136301 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 136300 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 136241 Query: 600 ctatcc 605 |||||| Sbjct: 136240 ctatcc 136235 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106728 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106786 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106787 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106846 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106847 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106906 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 106907 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 106966 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106967 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 107026 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107027 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 107086 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 107087 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 107146 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 107147 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 107201 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107202 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 107256 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 107257 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 107316 Query: 600 ctatcc 605 |||||| Sbjct: 107317 ctatcc 107322
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 1633 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 1691 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 1751 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1752 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 1811 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 1812 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 1871 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 1931 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1932 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 1991 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 1992 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 2051 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 2052 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 2106 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2107 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 2161 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2162 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 2221 Query: 600 ctatcc 605 |||||| Sbjct: 2222 ctatcc 2227
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135437 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135379 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135378 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135319 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135318 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135259 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135258 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135199 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135198 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135139 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135138 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135079 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135078 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135019 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135018 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 134964 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134963 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 134909 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 134908 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 134849 Query: 600 ctatcc 605 |||||| Sbjct: 134848 ctatcc 134843 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105599 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105657 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105658 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105717 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105718 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105777 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105778 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 105837 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105838 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 105897 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105898 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 105957 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 105958 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106017 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106018 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106072 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106073 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106127 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106128 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 106187 Query: 600 ctatcc 605 |||||| Sbjct: 106188 ctatcc 106193
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135572 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135514 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135513 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135454 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135453 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135394 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135393 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135334 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135333 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135274 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135273 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135214 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135213 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135154 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135153 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135099 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135098 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 135044 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 135043 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 134984 Query: 600 ctatcc 605 |||||| Sbjct: 134983 ctatcc 134978 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105771 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105829 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105830 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105889 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105890 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105949 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105950 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 106009 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106010 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 106069 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106070 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106129 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106130 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106189 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106190 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106244 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106245 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106299 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106300 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 106359 Query: 600 ctatcc 605 |||||| Sbjct: 106360 ctatcc 106365
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135570 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135512 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135511 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135452 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135392 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135391 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135332 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135331 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135272 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135271 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135212 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135211 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135152 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135151 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135097 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135096 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 135042 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 135041 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 134982 Query: 600 ctatcc 605 |||||| Sbjct: 134981 ctatcc 134976 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105768 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105826 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105827 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105886 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105887 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105946 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105947 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 106006 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106007 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 106066 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106067 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106126 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106127 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106186 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106187 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106241 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106242 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106296 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106297 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 106356 Query: 600 ctatcc 605 |||||| Sbjct: 106357 ctatcc 106362
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135482 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135424 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135423 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135364 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135363 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135304 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135303 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135244 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135243 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135184 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135183 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135124 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135123 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135064 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135063 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135009 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135008 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 134954 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 134953 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 134894 Query: 600 ctatcc 605 |||||| Sbjct: 134893 ctatcc 134888 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105646 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105704 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105705 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105764 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105765 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105824 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105825 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 105884 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105885 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 105944 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105945 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106004 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106005 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106064 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106065 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106119 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106120 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106174 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106175 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 106234 Query: 600 ctatcc 605 |||||| Sbjct: 106235 ctatcc 106240
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 136189 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 136131 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136130 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136071 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136070 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136011 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 136010 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 135951 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 135891 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135831 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135830 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135771 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135770 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135716 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135715 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 135661 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 135660 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 135601 Query: 600 ctatcc 605 |||||| Sbjct: 135600 ctatcc 135595 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106437 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106495 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106555 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106556 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106615 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 106616 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 106675 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106676 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 106735 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106736 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106795 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106796 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106855 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106856 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106910 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106911 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106965 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106966 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 107025 Query: 600 ctatcc 605 |||||| Sbjct: 107026 ctatcc 107031
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135920 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135862 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135861 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135802 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135801 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135742 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 135741 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 135682 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135681 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 135622 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135621 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135562 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135561 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135502 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135501 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135447 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135446 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 135392 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 135391 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 135332 Query: 600 ctatcc 605 |||||| Sbjct: 135331 ctatcc 135326 Score = 882 bits (445), Expect = 0.0 Identities = 569/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106218 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106276 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106277 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106336 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106337 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106396 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 106397 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 106456 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 106516 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106517 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106576 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106577 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106636 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106637 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106691 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106692 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 106746 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106747 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 106806 Query: 600 ctatcc 605 |||||| Sbjct: 106807 ctatcc 106812
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 878 bits (443), Expect = 0.0 Identities = 567/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 106114 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 106172 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106173 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106232 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106233 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106292 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct: 106293 caagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccag 106352 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106353 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 106412 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106413 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 106472 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 106473 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 106532 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| ||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 106533 cg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaag 106588 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106589 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 106643 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| || |||| ||||||||||||||||||||||| ||||||||||| Sbjct: 106644 agcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatc 106703 Query: 601 tatcc 605 ||||| Sbjct: 106704 tatcc 106708 Score = 829 bits (418), Expect = 0.0 Identities = 566/608 (93%), Gaps = 13/608 (2%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 135795 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 135737 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135736 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135677 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135676 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaat 135617 Query: 180 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 239 |||||||| ||||||||||||||||| || ||||| |||||||||||||| | |||||| Sbjct: 135616 acaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtcca 135557 Query: 240 gtagccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaatc 298 |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 135556 gtagccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatc 135497 Query: 299 ccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 357 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135496 ccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 135437 Query: 358 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 417 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135436 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135377 Query: 418 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 477 ||||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 135376 aaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttg 135321 Query: 478 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 537 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135320 aagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagc 135266 Query: 538 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||| Sbjct: 135265 cgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 135206 Query: 598 atctatcc 605 |||||||| Sbjct: 135205 atctatcc 135198
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 878 bits (443), Expect = 0.0 Identities = 567/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 131682 attcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 131624 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131623 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 131564 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131563 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 131504 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 131503 caagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccag 131444 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131443 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 131384 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131383 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 131324 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 131323 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 131264 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | ||||| |||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 131263 cg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaag 131208 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131207 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 131153 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 131152 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 131093 Query: 601 tatcc 605 ||||| Sbjct: 131092 tatcc 131088 Score = 878 bits (443), Expect = 0.0 Identities = 567/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 101763 attcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 101821 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101822 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 101881 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101882 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 101941 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 101942 caagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccag 102001 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102002 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 102061 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102062 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 102121 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 102122 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 102181 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | ||||| |||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 102182 cg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaag 102237 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 102238 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 102292 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 102293 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 102352 Query: 601 tatcc 605 ||||| Sbjct: 102353 tatcc 102357
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 878 bits (443), Expect = 0.0 Identities = 567/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 136071 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 136013 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136012 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135953 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135952 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135893 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct: 135892 caagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccag 135833 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135832 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 135773 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135772 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 135713 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 135712 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 135653 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| ||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 135652 cg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaag 135597 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135596 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 135542 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| || |||| ||||||||||||||||||||||| ||||||||||| Sbjct: 135541 agcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatc 135482 Query: 601 tatcc 605 ||||| Sbjct: 135481 tatcc 135477 Score = 878 bits (443), Expect = 0.0 Identities = 567/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 106336 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 106394 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106454 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106514 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct: 106515 caagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccag 106574 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106575 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 106634 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106635 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 106694 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 106695 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 106754 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| ||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 106755 cg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaag 106810 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106811 aatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgt 106865 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| || |||| ||||||||||||||||||||||| ||||||||||| Sbjct: 106866 agcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatc 106925 Query: 601 tatcc 605 ||||| Sbjct: 106926 tatcc 106930
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 874 bits (441), Expect = 0.0 Identities = 568/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135449 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135391 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135390 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135331 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135330 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135271 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135270 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135211 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135210 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135151 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135150 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135091 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135090 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135031 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135030 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 134976 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 134975 gaatgagccggcgactaataggcagtggcttggttaag-----ggaacccaccggagccg 134921 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 134920 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 134861 Query: 600 ctatcc 605 |||||| Sbjct: 134860 ctatcc 134855 Score = 874 bits (441), Expect = 0.0 Identities = 568/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105613 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105671 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105672 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105731 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105732 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105791 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105792 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 105851 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105852 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 105911 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105912 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 105971 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 105972 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106031 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106032 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106086 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 106087 gaatgagccggcgactaataggcagtggcttggttaag-----ggaacccaccggagccg 106141 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 106142 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 106201 Query: 600 ctatcc 605 |||||| Sbjct: 106202 ctatcc 106207
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 872 bits (440), Expect = 0.0 Identities = 568/606 (93%), Gaps = 11/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 109 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 167 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 cctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 227 Query: 121 tagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 287 Query: 180 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 239 |||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 288 acaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtcca 347 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 348 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 407 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 408 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 467 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 468 gtagtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaa 527 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | | | |||||||||||||||||||||| Sbjct: 528 ccg---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaa 583 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 584 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 638 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 639 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 698 Query: 600 ctatcc 605 |||||| Sbjct: 699 ctatcc 704
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 858 bits (433), Expect = 0.0 Identities = 566/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||| Sbjct: 139395 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaa 139337 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139336 cctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtag 139277 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139276 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 139217 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct: 139216 aaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccag 139157 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139156 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 139097 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139096 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 139037 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 139036 tagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 138977 Query: 421 cgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaa 479 || | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 138976 cg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaa 138922 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 138921 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 138867 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 138866 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 138807 Query: 600 ctatcc 605 |||||| Sbjct: 138806 ctatcc 138801 Score = 858 bits (433), Expect = 0.0 Identities = 566/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||| Sbjct: 109702 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaa 109760 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 109761 cctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtag 109820 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109821 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 109880 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct: 109881 aaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccag 109940 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 109941 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 110000 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110001 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 110060 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 110061 tagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 110120 Query: 421 cgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaa 479 || | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 110121 cg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaa 110175 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110176 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 110230 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 110231 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 110290 Query: 600 ctatcc 605 |||||| Sbjct: 110291 ctatcc 110296
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 858 bits (433), Expect = 0.0 Identities = 567/606 (93%), Gaps = 13/606 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 84 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 142 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 202 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 262 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||||| Sbjct: 263 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtcca 321 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 322 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 381 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 441 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 442 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 501 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 502 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 556 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 557 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 611 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 612 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 671 Query: 600 ctatcc 605 |||||| Sbjct: 672 ctatcc 677
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 854 bits (431), Expect = 0.0 Identities = 479/496 (96%), Gaps = 13/496 (2%) Strand = Plus / Minus Query: 115 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 175 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 295 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 470 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 75007 Query: 590 cctgggtgatctatcc 605 |||||||||||||||| Sbjct: 75006 cctgggtgatctatcc 74991 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75603 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 75544 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75543 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 46 gcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 854 bits (431), Expect = 0.0 Identities = 479/496 (96%), Gaps = 13/496 (2%) Strand = Plus / Plus Query: 115 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 175 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 295 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 470 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 382531 Query: 590 cctgggtgatctatcc 605 |||||||||||||||| Sbjct: 382532 cctgggtgatctatcc 382547 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 381935 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 381994 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381995 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 46 gcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 46 gcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 854 bits (431), Expect = 0.0 Identities = 479/496 (96%), Gaps = 13/496 (2%) Strand = Plus / Minus Query: 115 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 175 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 295 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 470 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 113098 Query: 590 cctgggtgatctatcc 605 |||||||||||||||| Sbjct: 113097 cctgggtgatctatcc 113082 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113694 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 113635 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113634 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 46 gcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 854 bits (431), Expect = 0.0 Identities = 479/496 (96%), Gaps = 13/496 (2%) Strand = Plus / Minus Query: 115 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 175 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 295 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 470 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 367780 Query: 590 cctgggtgatctatcc 605 |||||||||||||||| Sbjct: 367779 cctgggtgatctatcc 367764 Score = 854 bits (431), Expect = 0.0 Identities = 479/496 (96%), Gaps = 13/496 (2%) Strand = Plus / Minus Query: 115 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 175 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 295 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 470 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 184385 Query: 590 cctgggtgatctatcc 605 |||||||||||||||| Sbjct: 184384 cctgggtgatctatcc 184369 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 368376 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 368317 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368316 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 184981 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 184922 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184921 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 46 gcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 854 bits (431), Expect = 0.0 Identities = 567/608 (93%), Gaps = 12/608 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 139604 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 139546 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139545 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 139486 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139485 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 139426 Query: 181 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||| Sbjct: 139425 caagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtcca 139366 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139365 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 139306 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139305 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaa 139246 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 139245 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 139186 Query: 420 ccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttg 477 ||| | |||||||||||||||||||| || | | |||||||||||||||||||| Sbjct: 139185 ccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttg 139129 Query: 478 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 537 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139128 aagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagc 139074 Query: 538 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| Sbjct: 139073 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 139014 Query: 598 atctatcc 605 |||||||| Sbjct: 139013 atctatcc 139006 Score = 854 bits (431), Expect = 0.0 Identities = 567/608 (93%), Gaps = 12/608 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 109695 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 109753 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109754 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 109813 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109814 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 109873 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||| Sbjct: 109874 caagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtcca 109933 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109934 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 109993 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 109994 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaa 110053 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 110054 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 110113 Query: 420 ccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttg 477 ||| | |||||||||||||||||||| || | | |||||||||||||||||||| Sbjct: 110114 ccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttg 110170 Query: 478 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 537 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110171 aagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagc 110225 Query: 538 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| Sbjct: 110226 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 110285 Query: 598 atctatcc 605 |||||||| Sbjct: 110286 atctatcc 110293
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 844 bits (426), Expect = 0.0 Identities = 564/606 (93%), Gaps = 13/606 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 605 attcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 663 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 723 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 783 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 784 caagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccag 843 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 903 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 904 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagccaaa 963 Query: 361 tagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 964 tagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 1023 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | ||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct: 1024 ccg---taagctctcaagcagtgggaggagacag---gctctgaccgcgtgcctgttgaa 1077 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1078 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 1132 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1133 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 1192 Query: 600 ctatcc 605 |||||| Sbjct: 1193 ctatcc 1198
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 842 bits (425), Expect = 0.0 Identities = 564/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 142770 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 142712 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142711 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 142652 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 142651 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcata 142592 Query: 181 caagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||| Sbjct: 142591 caagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtcca 142532 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142531 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 142472 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 142471 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaa 142412 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 142411 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 142352 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | ||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 142351 ccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 142297 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142296 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 142242 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 142241 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 142182 Query: 600 ctatcc 605 |||||| Sbjct: 142181 ctatcc 142176 Score = 842 bits (425), Expect = 0.0 Identities = 564/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 110558 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 110616 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110617 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 110676 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110677 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcata 110736 Query: 181 caagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||| Sbjct: 110737 caagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtcca 110796 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110797 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 110856 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110857 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaa 110916 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 110917 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 110976 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | ||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 110977 ccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 111031 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 111032 gaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccg 111086 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 111087 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 111146 Query: 600 ctatcc 605 |||||| Sbjct: 111147 ctatcc 111152
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 839 bits (423), Expect = 0.0 Identities = 567/608 (93%), Gaps = 14/608 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 1875 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 1933 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag-cgattcccgta 119 |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1934 cctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaaaggcgattcccgta 1993 Query: 120 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1994 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 2053 Query: 180 acaagcgtt-gtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtc 237 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 2054 acaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 2113 Query: 238 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2114 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 2173 Query: 298 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2174 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 2233 Query: 358 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 417 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 2234 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 2293 Query: 418 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 477 ||||| | |||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 2294 aaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttg 2348 Query: 478 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 537 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2349 aagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagc 2403 Query: 538 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| Sbjct: 2404 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 2463 Query: 598 atctatcc 605 |||||||| Sbjct: 2464 atctatcc 2471
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 833 bits (420), Expect = 0.0 Identities = 561/605 (92%), Gaps = 11/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 4340 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 4398 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4399 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 4458 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4459 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaata 4518 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||| Sbjct: 4519 caagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccag 4578 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4579 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 4638 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4639 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 4698 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 4699 tagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaac 4758 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 4759 cg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 4813 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 4814 aatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccggagccgt 4868 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 4869 agcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatc 4928 Query: 601 tatcc 605 ||||| Sbjct: 4929 tatcc 4933
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 833 bits (420), Expect = 0.0 Identities = 561/605 (92%), Gaps = 11/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 23585 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 23527 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23526 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 23467 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 23466 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaata 23407 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||| Sbjct: 23406 caagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccag 23347 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23346 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 23287 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23286 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 23227 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 23226 tagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaac 23167 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 23166 cg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 23112 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 23111 aatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccggagccgt 23057 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 23056 agcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatc 22997 Query: 601 tatcc 605 ||||| Sbjct: 22996 tatcc 22992
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 833 bits (420), Expect = 0.0 Identities = 562/605 (92%), Gaps = 12/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 4609 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 4667 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4668 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 4727 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4728 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 4787 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || || ||||||||||||| ||||||||| Sbjct: 4788 caagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccag 4847 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 4848 tagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatccc 4907 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4908 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 4967 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||| Sbjct: 4968 tagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaac 5027 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | ||||||||| |||||||||| | | | ||||||||||||||||||||||| Sbjct: 5028 cg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 5081 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 5082 aatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccggagccgt 5136 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 5137 agcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatc 5196 Query: 601 tatcc 605 ||||| Sbjct: 5197 tatcc 5201
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 833 bits (420), Expect = 0.0 Identities = 562/605 (92%), Gaps = 12/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 4609 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 4667 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4668 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 4727 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4728 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 4787 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||| || || || ||||||||||||| ||||||||| Sbjct: 4788 caagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccag 4847 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 4848 tagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatccc 4907 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4908 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 4967 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||| Sbjct: 4968 tagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaac 5027 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | ||||||||| |||||||||| | | | ||||||||||||||||||||||| Sbjct: 5028 cg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 5081 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 5082 aatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccggagccgt 5136 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 5137 agcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatc 5196 Query: 601 tatcc 605 ||||| Sbjct: 5197 tatcc 5201
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 827 bits (417), Expect = 0.0 Identities = 560/605 (92%), Gaps = 12/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 || ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | ||||| |||||||||||||| || || |||||| ||||||||||||||| Sbjct: 536 cg---taagctctcaagcagtgggaggagacag---gctctgaacgcgtgcctgttgaaa 589 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 590 aatgagccggcgactcatacgcagtggcttggttaag-----ggaacccaccggagccgt 644 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 645 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatc 704 Query: 601 tatcc 605 ||||| Sbjct: 705 tatcc 709
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 823 bits (415), Expect = 0.0 Identities = 559/605 (92%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||| ||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 110 attcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 168 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 228 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 229 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 288 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| |||||| ||||||||||||||||||||| |||||||| |||||| | ||||||| Sbjct: 289 taagtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccag 348 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 349 tagccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatccc 408 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 468 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 469 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 528 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 529 cg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaag 585 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| ||||| |||||| |||||||| || ||||||||||||||| Sbjct: 586 aatgagccggcgacttataggtagtggcctggttaag-----gggacccaccggagccgt 640 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| | |||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 641 agcgaaagcgagtcttcctggggcaattgtcactacttatggacccgaacctgggtgatc 700 Query: 601 tatcc 605 ||||| Sbjct: 701 tatcc 705
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 821 bits (414), Expect = 0.0 Identities = 561/607 (92%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||| ||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 86371 attcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagagacaa 86429 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86430 cctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtag 86489 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc--aa 178 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86490 tagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcccaa 86549 Query: 179 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 238 || |||| |||||||||||||||||||||||||| | ||||||||||||| | ||||| Sbjct: 86550 tataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtcc 86609 Query: 239 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 298 ||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 86610 agtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatc 86669 Query: 299 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86670 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 86729 Query: 359 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 418 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 86730 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 86789 Query: 419 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 478 |||| | |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 86790 accg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttga 86846 Query: 479 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 538 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 86847 agaatgagccggcgacttataggcagtggcttggttaag-----ggaacccaccggagcc 86901 Query: 539 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtga 598 ||||||| |||||||||| || |||| ||||||||||||||||||||||| ||||||||| Sbjct: 86902 gtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtga 86961 Query: 599 tctatcc 605 ||||||| Sbjct: 86962 tctatcc 86968
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 821 bits (414), Expect = 0.0 Identities = 561/607 (92%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 88457 attcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagagacaa 88515 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88516 cctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtag 88575 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca--a 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 88576 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcacaa 88635 Query: 179 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 238 || |||| |||||||||||||||||||||||||| | ||||||||||||| | ||||| Sbjct: 88636 tataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtcc 88695 Query: 239 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 298 ||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 88696 agtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatc 88755 Query: 299 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88756 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 88815 Query: 359 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 418 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 88816 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 88875 Query: 419 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 478 |||| | |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 88876 accg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttga 88932 Query: 479 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 538 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 88933 agaatgagccggcgacttataggcagtggcttggttaag-----ggaacccaccggagcc 88987 Query: 539 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtga 598 ||||||| |||||||||| || |||| ||||||||||||||||||||||| ||||||||| Sbjct: 88988 gtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtga 89047 Query: 599 tctatcc 605 ||||||| Sbjct: 89048 tctatcc 89054
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 809 bits (408), Expect = 0.0 Identities = 563/607 (92%), Gaps = 17/607 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 209 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 267 Query: 61 cctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattcccgta 119 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 268 cctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattcccgta 327 Query: 120 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 179 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 328 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaat 386 Query: 180 acaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaaagtcc 238 |||||||| |||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 387 acaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagtcc 446 Query: 239 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 506 Query: 299 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 358 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 ccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 566 Query: 359 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 418 |||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||| |||| Sbjct: 567 agtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaacatgaa 625 Query: 419 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 478 |||| | |||||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 626 accg---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcctgttga 678 Query: 479 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 538 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 679 agaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccggagcc 733 Query: 539 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtga 598 |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 734 gtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtga 793 Query: 599 tctatcc 605 ||||||| Sbjct: 794 tctatcc 800
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 807 bits (407), Expect = 0.0 Identities = 556/600 (92%), Gaps = 13/600 (2%) Strand = Plus / Minus Query: 9 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 68 |||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| || Sbjct: 131753 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtga 131695 Query: 69 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131694 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 131635 Query: 129 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 188 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131634 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 131575 Query: 189 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 246 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 131574 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 131515 Query: 247 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 306 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131514 aaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtga 131455 Query: 307 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 366 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131454 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtac 131395 Query: 367 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 426 |||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 131394 cgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---t 131338 Query: 427 gagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 485 |||||||||||||||||||| || | || |||||||||||||||||||||||||||| Sbjct: 131337 aagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatga 131279 Query: 486 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 545 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 131278 gccggcgactcataggcagtggcttggttaag-----ggaaaccaccggagccgtagcga 131224 Query: 546 aagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 ||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 131223 aagcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 131164 Score = 807 bits (407), Expect = 0.0 Identities = 556/600 (92%), Gaps = 13/600 (2%) Strand = Plus / Plus Query: 9 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 68 |||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| || Sbjct: 103641 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtga 103699 Query: 69 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103700 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 103759 Query: 129 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 188 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103760 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 103819 Query: 189 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 246 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 103820 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 103879 Query: 247 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 306 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103880 aaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtga 103939 Query: 307 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 366 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103940 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtac 103999 Query: 367 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 426 |||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 104000 cgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---t 104056 Query: 427 gagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 485 |||||||||||||||||||| || | || |||||||||||||||||||||||||||| Sbjct: 104057 aagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatga 104115 Query: 486 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 545 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 104116 gccggcgactcataggcagtggcttggttaag-----ggaaaccaccggagccgtagcga 104170 Query: 546 aagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 ||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 104171 aagcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 104230
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 795 bits (401), Expect = 0.0 Identities = 407/409 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 108 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 167 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 227 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 287 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 347 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 348 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 407 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 467 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 787 bits (397), Expect = 0.0 Identities = 557/606 (91%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| || Sbjct: 52577 attcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagagataa 52519 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 52518 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 52459 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52458 tagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaata 52399 Query: 181 caagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtcca 239 ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||||| Sbjct: 52398 aaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtcca 52339 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 52338 gtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcc 52279 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 52278 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaa 52219 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 52218 gtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaa 52159 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 52158 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 52104 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 52103 gaatgagccggcgactcataggcagcggcttggttaag-----ggaacccaccggagcca 52049 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 |||||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 52048 tagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgat 51989 Query: 600 ctatcc 605 |||||| Sbjct: 51988 ctatcc 51983 Score = 787 bits (397), Expect = 0.0 Identities = 557/606 (91%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| || Sbjct: 37251 attcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagagataa 37309 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 37310 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 37369 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 37370 tagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaata 37429 Query: 181 caagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtcca 239 ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||||| Sbjct: 37430 aaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtcca 37489 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 37490 gtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcc 37549 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 37550 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaa 37609 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 37610 gtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaa 37669 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 37670 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 37724 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 37725 gaatgagccggcgactcataggcagcggcttggttaag-----ggaacccaccggagcca 37779 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 |||||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 37780 tagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgat 37839 Query: 600 ctatcc 605 |||||| Sbjct: 37840 ctatcc 37845
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 787 bits (397), Expect = 0.0 Identities = 403/405 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 22 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 81 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 141 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 201 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 261 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 262 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 321 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 381 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 405 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 787 bits (397), Expect = 0.0 Identities = 557/606 (91%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| || Sbjct: 4179 attcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagagataa 4237 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4238 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 4297 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4298 tagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaata 4357 Query: 181 caagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtcca 239 ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||||| Sbjct: 4358 aaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtcca 4417 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 4418 gtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcc 4477 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 4478 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaa 4537 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 4538 gtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaa 4597 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 4598 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 4652 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 4653 gaatgagccggcgactcataggcagcggcttggttaag-----ggaacccaccggagcca 4707 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 |||||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 4708 tagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgat 4767 Query: 600 ctatcc 605 |||||| Sbjct: 4768 ctatcc 4773
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 783 bits (395), Expect = 0.0 Identities = 501/533 (93%), Gaps = 10/533 (1%) Strand = Plus / Minus Query: 74 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 132 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 133 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 192 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 193 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 252 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 253 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 312 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 313 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 373 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 432 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 433 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 492 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 493 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 552 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgag 94 Query: 553 tcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 |||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 93 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 41
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 781 bits (394), Expect = 0.0 Identities = 558/611 (91%), Gaps = 15/611 (2%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 128337 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 128279 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 128278 cctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtag 128219 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc---- 176 |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128218 tagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgata 128159 Query: 177 --aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct: 128158 caaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaaga 128099 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 128098 gtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtgg 128039 Query: 295 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128038 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 127979 Query: 355 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 414 |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 127978 gcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaaca 127919 Query: 415 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 474 |||||||| | |||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 127918 tgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctg 127862 Query: 475 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 534 |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 127861 ttgaggaatgagccggcgactcataggcagtggcctggttaag-----ggaacccaccgg 127807 Query: 535 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgg 594 |||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||| Sbjct: 127806 agccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacctgg 127747 Query: 595 gtgatctatcc 605 ||||||||||| Sbjct: 127746 gtgatctatcc 127736 Score = 781 bits (394), Expect = 0.0 Identities = 558/611 (91%), Gaps = 15/611 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 95110 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 95168 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 95169 cctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtag 95228 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc---- 176 |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95229 tagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgata 95288 Query: 177 --aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 234 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct: 95289 caaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaaga 95348 Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 95349 gtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtgg 95408 Query: 295 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95468 Query: 355 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 414 |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 95469 gcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaaca 95528 Query: 415 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 474 |||||||| | |||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 95529 tgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctg 95585 Query: 475 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 534 |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 95586 ttgaggaatgagccggcgactcataggcagtggcctggttaag-----ggaacccaccgg 95640 Query: 535 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgg 594 |||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||| Sbjct: 95641 agccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacctgg 95700 Query: 595 gtgatctatcc 605 ||||||||||| Sbjct: 95701 gtgatctatcc 95711
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 767 bits (387), Expect = 0.0 Identities = 553/605 (91%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||| Sbjct: 116100 attcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaa 116042 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 116041 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtag 115982 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | Sbjct: 115981 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaa 115923 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||| Sbjct: 115922 taagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccag 115863 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 || ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 115862 taaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatccc 115803 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 115802 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 115743 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 115742 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 115683 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 115682 cgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaag 115626 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||| Sbjct: 115625 aatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgt 115571 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 115570 agcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatc 115511 Query: 601 tatcc 605 ||||| Sbjct: 115510 tatcc 115506 Score = 767 bits (387), Expect = 0.0 Identities = 553/605 (91%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||| Sbjct: 86020 attcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaa 86078 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86079 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtag 86138 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | Sbjct: 86139 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaa 86197 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||| Sbjct: 86198 taagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccag 86257 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 || ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 86258 taaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatccc 86317 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86318 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 86377 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 86378 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 86437 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 86438 cgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaag 86494 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||| Sbjct: 86495 aatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgt 86549 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 86550 agcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatc 86609 Query: 601 tatcc 605 ||||| Sbjct: 86610 tatcc 86614
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 759 bits (383), Expect = 0.0 Identities = 551/605 (91%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| ||| |||| |||||||||| Sbjct: 110 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaa 168 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 169 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 228 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 229 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaag 288 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 | |||||||| |||||||||||| ||||| | | ||||| ||||||| | ||||||| Sbjct: 289 taggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccag 348 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 349 tagccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatccc 408 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 409 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 468 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 469 tagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaac 528 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 529 cg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaag 585 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||| Sbjct: 586 aatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccggagccgt 640 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 641 agcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatc 700 Query: 601 tatcc 605 ||||| Sbjct: 701 tatcc 705
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 31 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 90 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 91 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 151 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 209 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 210 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 269 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 270 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 330 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 389 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 390 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 449 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 510 tggtta 515 |||||| Sbjct: 492 tggtta 497
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 753 bits (380), Expect = 0.0 Identities = 552/606 (91%), Gaps = 10/606 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||| Sbjct: 146450 attcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaa 146392 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 146391 cctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 146332 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 146331 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 146272 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||| Sbjct: 146271 taagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccag 146212 Query: 241 tagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcc 299 ||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| Sbjct: 146211 tagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcc 146152 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 146151 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaa 146092 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 146091 gtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaa 146032 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | ||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 146031 ccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaa 145975 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| Sbjct: 145974 gaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccggagccg 145920 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 145919 tagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgat 145860 Query: 600 ctatcc 605 |||||| Sbjct: 145859 ctatcc 145854 Score = 753 bits (380), Expect = 0.0 Identities = 552/606 (91%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||| Sbjct: 112012 attcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaa 112070 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112071 cctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 112130 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112131 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 112190 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||| Sbjct: 112191 taagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccag 112250 Query: 241 tagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcc 299 ||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| Sbjct: 112251 tagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcc 112310 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 112311 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaa 112370 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 112371 gtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaa 112430 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | ||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 112431 ccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaa 112487 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| Sbjct: 112488 gaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccggagccg 112542 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 112543 tagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgat 112602 Query: 600 ctatcc 605 |||||| Sbjct: 112603 ctatcc 112608
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 753 bits (380), Expect = 0.0 Identities = 483/513 (94%), Gaps = 7/513 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 507 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 449 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 389 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 329 Query: 181 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 239 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 328 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 269 Query: 240 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 209 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 208 cgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcgaa 149 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 148 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 89 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 88 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 34 Query: 480 gaatgagccggcgactcataggcagtggcttgg 512 ||||||||||||||||||||||||||||||||| Sbjct: 33 gaatgagccggcgactcataggcagtggcttgg 1
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 749 bits (378), Expect = 0.0 Identities = 553/609 (90%), Gaps = 13/609 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||||||||||| |||||||| ||| || |||||||||||| Sbjct: 110 attcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagacaa 168 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 169 cccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgtag 228 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 229 tagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctata 288 Query: 181 caa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 236 ||| || ||| ||||||||||||||| ||||||| | |||||| |||||| | ||| Sbjct: 289 caaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagagt 348 Query: 237 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 296 |||||| |||||||||| || | |||||||||| |||||||||||||||||||||||||| Sbjct: 349 ccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtggaa 408 Query: 297 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 468 Query: 357 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 416 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 469 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 528 Query: 417 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 476 |||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 529 aaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgtt 585 Query: 477 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 536 ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| Sbjct: 586 gaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccggag 640 Query: 537 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggt 596 ||||||||||||| |||||| | |||| ||||||||||||||||||||||| ||||||| Sbjct: 641 ccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaacctgggt 700 Query: 597 gatctatcc 605 ||||||||| Sbjct: 701 gatctatcc 709
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 745 bits (376), Expect = 0.0 Identities = 550/605 (90%), Gaps = 6/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||||||||||| |||||||||||| || |||||||||||| Sbjct: 93 attcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagagacaa 151 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 152 cctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgtag 211 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 212 tagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaa 271 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||| |||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 272 gaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 331 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 || |||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||| Sbjct: 332 taaccgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatccc 391 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 451 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 452 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 511 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| ||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 512 cg---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaag 568 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| |||||||||||| | | ||||||||||| | Sbjct: 569 aatgagccggcgacttataggcagtggcctggttaagggaaag--aaccaccggagccat 626 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 627 agcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaacctgggtgatc 686 Query: 601 tatcc 605 ||||| Sbjct: 687 tatcc 691
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 743 bits (375), Expect = 0.0 Identities = 549/605 (90%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 3999 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 4057 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4058 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 4117 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4118 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 4177 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 4178 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 4237 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 4238 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 4297 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4298 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 4357 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 4358 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 4417 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 4418 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 4474 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| |||||||| |||| |||||||||||| Sbjct: 4475 aatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggagccgt 4529 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 4530 agcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatc 4589 Query: 601 tatcc 605 ||||| Sbjct: 4590 tatcc 4594
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 743 bits (375), Expect = 0.0 Identities = 549/605 (90%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 109 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 167 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 168 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 227 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 287 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 288 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 347 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 348 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 407 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 467 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 468 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 527 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 528 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 584 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| |||||||| |||| |||||||||||| Sbjct: 585 aatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggagccgt 639 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 640 agcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatc 699 Query: 601 tatcc 605 ||||| Sbjct: 700 tatcc 704
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 743 bits (375), Expect = 0.0 Identities = 549/605 (90%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 151136 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 151078 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 151077 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 151018 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 151017 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 150958 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 150957 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 150898 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 150897 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 150838 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150837 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 150778 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 150777 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 150718 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 150717 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 150661 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| |||||||| |||| |||||||||||| Sbjct: 150660 aatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggagccgt 150606 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 150605 agcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatc 150546 Query: 601 tatcc 605 ||||| Sbjct: 150545 tatcc 150541 Score = 743 bits (375), Expect = 0.0 Identities = 549/605 (90%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 117530 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 117588 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117589 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 117648 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117649 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 117708 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 117709 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 117768 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 117769 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 117828 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117829 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 117888 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 117889 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 117948 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 117949 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 118005 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| |||||||| |||| |||||||||||| Sbjct: 118006 aatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggagccgt 118060 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 118061 agcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatc 118120 Query: 601 tatcc 605 ||||| Sbjct: 118121 tatcc 118125
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 743 bits (375), Expect = 0.0 Identities = 549/605 (90%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 109 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 167 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 168 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 227 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 287 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 288 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 347 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 348 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 407 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 467 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 468 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 527 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 528 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 584 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| |||||||||||| |||||||| |||| |||||||||||| Sbjct: 585 aatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggagccgt 639 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 640 agcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatc 699 Query: 601 tatcc 605 ||||| Sbjct: 700 tatcc 704
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 739 bits (373), Expect = 0.0 Identities = 548/603 (90%), Gaps = 10/603 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 2153 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 2211 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2212 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 2271 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 2272 tagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaa 2331 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 2332 taagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 2391 Query: 241 tagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcc 299 ||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||| Sbjct: 2392 tagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcc 2451 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 2452 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaa 2511 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 2512 gtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 2571 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2572 ccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaa 2628 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||| Sbjct: 2629 gaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccggagccg 2683 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| Sbjct: 2684 tagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgat 2743 Query: 600 cta 602 ||| Sbjct: 2744 cta 2746
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 739 bits (373), Expect = 0.0 Identities = 548/603 (90%), Gaps = 10/603 (1%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 118040 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 117982 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117981 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 117922 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 117921 tagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaa 117862 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 117861 taagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 117802 Query: 241 tagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcc 299 ||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||| Sbjct: 117801 tagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcc 117742 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 117741 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaa 117682 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 117681 gtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 117622 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 117621 ccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaa 117565 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||| Sbjct: 117564 gaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccggagccg 117510 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| Sbjct: 117509 tagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgat 117450 Query: 600 cta 602 ||| Sbjct: 117449 cta 117447 Score = 739 bits (373), Expect = 0.0 Identities = 548/603 (90%), Gaps = 10/603 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 90062 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 90120 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 90121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 90180 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 90181 tagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaa 90240 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 90241 taagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 90300 Query: 241 tagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcc 299 ||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||| Sbjct: 90301 tagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcc 90360 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 90361 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaa 90420 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 90421 gtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 90480 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 ||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 90481 ccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaa 90537 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 |||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||| Sbjct: 90538 gaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccggagccg 90592 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 ||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| Sbjct: 90593 tagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgat 90652 Query: 600 cta 602 ||| Sbjct: 90653 cta 90655
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 724 bits (365), Expect = 0.0 Identities = 374/377 (99%) Strand = Plus / Plus Query: 229 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 288 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 289 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 349 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 409 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 469 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 529 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 588 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 589 ccctgggtgatctatcc 605 |||||||||||||||| Sbjct: 361 acctgggtgatctatcc 377
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 708 bits (357), Expect = 0.0 Identities = 426/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 46361 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 46419 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 46420 cctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtag 46479 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46480 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaata 46539 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 46540 caagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccag 46599 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46600 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 46659 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46660 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 46719 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 46720 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 46779 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | ||||| |||||||||||||| Sbjct: 46780 cg---taagctctcaagcagtgggagg 46803 Score = 230 bits (116), Expect = 4e-57 Identities = 140/148 (94%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatcc 46960
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 708 bits (357), Expect = 0.0 Identities = 426/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 130426 attcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaa 130368 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130367 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 130308 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130307 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctata 130248 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 130247 caagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 130188 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130187 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 130128 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 130127 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 130068 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 130067 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 130008 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 130007 cg---taagctcccaagcagtgggagg 129984 Score = 708 bits (357), Expect = 0.0 Identities = 426/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 102030 attcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaa 102088 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102089 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 102148 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 102149 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctata 102208 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 102209 caagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 102268 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102269 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 102328 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102329 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 102388 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 102389 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 102448 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 102449 cg---taagctcccaagcagtgggagg 102472 Score = 214 bits (108), Expect = 3e-52 Identities = 138/148 (93%), Gaps = 5/148 (3%) Strand = Plus / Minus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatcc 129827 Score = 214 bits (108), Expect = 3e-52 Identities = 138/148 (93%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatcc 102629
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 700 bits (353), Expect = 0.0 Identities = 425/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 || ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||| Sbjct: 476 tactaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%), Gaps = 5/114 (4%) Strand = Plus / Plus Query: 492 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 551 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 552 gtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 700
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 700 bits (353), Expect = 0.0 Identities = 425/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 || ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 476 tactaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 198 bits (100), Expect = 1e-47 Identities = 136/148 (91%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatcc 723
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 700 bits (353), Expect = 0.0 Identities = 425/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 || ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 176 bits (89), Expect = 5e-41 Identities = 136/149 (91%), Gaps = 7/149 (4%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 518 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 576 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 577 ttatggacccgaccctgggtgatctatcc 605 |||||||||||| |||||||||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatcc 723
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 692 bits (349), Expect = 0.0 Identities = 424/447 (94%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 || ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 165 bits (83), Expect = 2e-37 Identities = 133/148 (89%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatcc 723
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 692 bits (349), Expect = 0.0 Identities = 424/447 (94%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 || ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaac 535 Query: 421 cgtgctgagctcccaagcagtgggagg 447 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 167 bits (84), Expect = 5e-38 Identities = 133/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatcc 722
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 686 bits (346), Expect = 0.0 Identities = 352/354 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 13 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 72 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 192 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 252 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 253 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 312 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 366
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 678 bits (342), Expect = 0.0 Identities = 453/486 (93%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||| Sbjct: 158 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaa 216 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 217 cctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtag 276 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 336 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct: 337 aaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccag 396 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 397 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 456 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 516 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 517 tagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 576 Query: 421 cgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaa 479 || | ||||||||||||| |||||| | || | |||||||||||||||||||||| Sbjct: 577 cg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaa 631 Query: 480 gaatga 485 |||||| Sbjct: 632 gaatga 637
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 672 bits (339), Expect = 0.0 Identities = 520/576 (90%), Gaps = 12/576 (2%) Strand = Plus / Plus Query: 31 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 90 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ctgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccag 197 Query: 91 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 150 ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 198 aggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaa 257 Query: 151 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 209 ||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || Sbjct: 258 ccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagctt 317 Query: 210 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 269 | || |||||||||||||| |||||||||||| | |||||||||||| || ||||| Sbjct: 318 aaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctct 377 Query: 270 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 329 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 378 gacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaag 437 Query: 330 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 389 ||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 438 gctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa- 496 Query: 390 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 449 ||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 497 ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggag 553 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 554 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggct 611 Query: 510 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 569 |||||||| |||||||||||||||| |||||||||||||| || ||||| | |||| Sbjct: 612 tggttaag-----ggaacccaccggagccatagcgaaagcgagtattcataggactattg 666 Query: 570 tcactgcttatggacccgaccctgggtgatctatcc 605 ||||||||||||||||||| |||||||||||||||| Sbjct: 667 tcactgcttatggacccgaacctgggtgatctatcc 702
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 648 bits (327), Expect = 0.0 Identities = 424/453 (93%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 175 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccag 355 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| |||||| Sbjct: 476 tagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaac 534 Query: 421 cgtgctgagctcccaagcagtgggaggggaaag 453 || | ||||| |||||||||||||| ||||| Sbjct: 535 cg---taagctctcaagcagtgggaggagaaag 564 Score = 141 bits (71), Expect = 3e-30 Identities = 80/83 (96%) Strand = Plus / Plus Query: 523 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 582 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 583 acccgaccctgggtgatctatcc 605 |||||| |||||||||||||||| Sbjct: 662 acccgaacctgggtgatctatcc 684
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 624 bits (315), Expect = e-176 Identities = 324/327 (99%) Strand = Plus / Plus Query: 279 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 339 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 399 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 458 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 459 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 519 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 578 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 579 atggacccgaccctgggtgatctatcc 605 |||||||||| |||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatcc 327
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 615 bits (310), Expect = e-173 Identities = 375/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 106 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 164 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 224 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 284 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| |||||||||||||||||||| || | | |||||||||||||| | ||||||| Sbjct: 285 caagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccag 344 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 345 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 404 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| Sbjct: 405 gtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaag 462 Query: 361 tagtaccgtgagggaaaggtgaaaagaaccccc 393 |||||||||||||||| |||| ||||||||||| Sbjct: 463 tagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 115 bits (58), Expect = 2e-22 Identities = 101/111 (90%), Gaps = 7/111 (6%) Strand = Plus / Plus Query: 498 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 556 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 557 aatagggcgattgtcactgcttatggacccg-accct-gggtgatctatcc 605 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatcc 719
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 609 bits (307), Expect = e-171 Identities = 365/383 (95%), Gaps = 1/383 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||| Sbjct: 86 attcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagacaa 144 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 204 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 264 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||||||| ||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 265 caagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccag 324 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 325 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 384 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 444 Query: 361 tagtaccgtgagggaaaggtgaa 383 |||||||||||||||| |||||| Sbjct: 445 tagtaccgtgagggaagggtgaa 467
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 601 bits (303), Expect = e-168 Identities = 309/311 (99%) Strand = Plus / Plus Query: 295 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 355 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 415 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 475 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 535 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgg 594 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 595 gtgatctatcc 605 ||||||||||| Sbjct: 301 gtgatctatcc 311
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 585 bits (295), Expect = e-164 Identities = 313/318 (98%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 290 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 470 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 527 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 528 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 587 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 588 accctgggtgatctatcc 605 | |||||||||||||||| Sbjct: 122520 aacctgggtgatctatcc 122503 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123361 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 123302 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123301 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 123242 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123241 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 123182 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 123122 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 298 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123121 tagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 585 bits (295), Expect = e-164 Identities = 313/318 (98%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 290 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 350 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 410 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 470 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 527 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 528 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 587 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 588 accctgggtgatctatcc 605 | |||||||||||||||| Sbjct: 12825061 aacctgggtgatctatcc 12825044 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12825902 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 12825843 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825842 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 12825783 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825782 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 12825723 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825722 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 12825663 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 298 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825662 tagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 235 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 294 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 16 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 75 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 76 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 136 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 195 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 196 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 255 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 256 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 315 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 316 gaccaccttgcaaggctaaatactcctgggtg 347 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 525 bits (265), Expect = e-146 Identities = 406/451 (90%), Gaps = 9/451 (1%) Strand = Plus / Minus Query: 156 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 215 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 216 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 275 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 276 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 336 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 395 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 396 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 455 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 456 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 515 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 516 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 575 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 576 c-ttatggacccgaccctgggtgatctatcc 605 | |||||||||||| |||||||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatcc 5842 Score = 210 bits (106), Expect = 4e-51 Identities = 143/154 (92%), Gaps = 1/154 (0%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||| ||| | ||| Sbjct: 6467 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaa 6409 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 6408 cctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaaagcgattcccgtag 6349 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgt 154 |||||||||||||||||||||||||||||||||| Sbjct: 6348 tagcggcgagcgaaatgggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 511 bits (258), Expect = e-142 Identities = 487/561 (86%), Gaps = 13/561 (2%) Strand = Plus / Minus Query: 49 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 108 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 109 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 168 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 169 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 224 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 225 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 284 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 285 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 344 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 345 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 404 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 405 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 464 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 465 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 524 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 138644 Query: 525 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 584 |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 138643 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggac 138584 Query: 585 ccgaccctgggtgatctatcc 605 |||| || ||||||||||||| Sbjct: 138583 ccgaacccgggtgatctatcc 138563 Score = 511 bits (258), Expect = e-142 Identities = 487/561 (86%), Gaps = 13/561 (2%) Strand = Plus / Plus Query: 49 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 108 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 109 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 168 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 169 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 224 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 225 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 284 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 285 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 344 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 345 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 404 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 405 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 464 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 465 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 524 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 83233 Query: 525 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 584 |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 83234 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggac 83293 Query: 585 ccgaccctgggtgatctatcc 605 |||| || ||||||||||||| Sbjct: 83294 ccgaacccgggtgatctatcc 83314
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 498 bits (251), Expect = e-137 Identities = 519/605 (85%), Gaps = 5/605 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 144028 attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaa 144087 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| Sbjct: 144088 cccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctag 144147 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 || ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144148 taacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatg 144207 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||| Sbjct: 144208 agggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccag 144267 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||| ||| | |||||| | |||| |||| |||||||||||||||| |||||| Sbjct: 144268 tagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatccc 144327 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 144328 gtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaag 144387 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 144388 cagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 144447 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| Sbjct: 144448 cg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaag 144504 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| ||||| ||||| ||||||||| |||||| |||||||||| Sbjct: 144505 aatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc-ccggagccgt 144562 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| | |||| |||||||| |||||| |||||| ||||||||||| Sbjct: 144563 agcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatc 144622 Query: 601 tatcc 605 ||||| Sbjct: 144623 tatcc 144627 Score = 498 bits (251), Expect = e-137 Identities = 519/605 (85%), Gaps = 5/605 (0%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 88823 attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaa 88764 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| Sbjct: 88763 cccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctag 88704 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 || ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88703 taacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatg 88644 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||| Sbjct: 88643 agggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccag 88584 Query: 241 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 300 |||||| ||| | |||||| | |||| |||| |||||||||||||||| |||||| Sbjct: 88583 tagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatccc 88524 Query: 301 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 360 |||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 88523 gtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaag 88464 Query: 361 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 420 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 88463 cagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 88404 Query: 421 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 480 || ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| Sbjct: 88403 cg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaag 88347 Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||||||||| ||||| ||||| ||||||||| |||||| |||||||||| Sbjct: 88346 aatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc-ccggagccgt 88289 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||||| | |||| |||||||| |||||| |||||| ||||||||||| Sbjct: 88288 agcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatc 88229 Query: 601 tatcc 605 ||||| Sbjct: 88228 tatcc 88224
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 422 bits (213), Expect = e-115 Identities = 287/308 (93%), Gaps = 4/308 (1%) Strand = Plus / Plus Query: 9 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 68 |||||||||||||| |||||| ||||||||||| | |||||||||||||||| ||| || Sbjct: 2717 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtga 2775 Query: 69 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2776 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 2835 Query: 129 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 188 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2836 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 2895 Query: 189 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 246 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 2896 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 2955 Query: 247 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 306 ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2956 aaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtga 3014 Query: 307 atcagcaa 314 |||||||| Sbjct: 3015 atcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 422 bits (213), Expect = e-115 Identities = 287/308 (93%), Gaps = 4/308 (1%) Strand = Plus / Plus Query: 9 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 68 |||||||||||||| |||||| ||||||||||| | |||||||||||||||| ||| || Sbjct: 972 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtga 1030 Query: 69 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 1090 Query: 129 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 188 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1091 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 1150 Query: 189 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 246 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 1151 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 1210 Query: 247 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 306 ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1211 aaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtga 1269 Query: 307 atcagcaa 314 |||||||| Sbjct: 1270 atcagcaa 1277
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 232 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 291 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 292 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 352 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 411 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 412 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 471 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 472 ctgttgaagaatgagccggcgactcataggcagtggcttg 511 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 11 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 70 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 131 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 190 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 191 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 250 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 251 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 310 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 311 gcaaggaccaccttgcaag 329 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%), Gaps = 5/131 (3%) Strand = Plus / Minus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 578 tatggacccga 588 ||||||||||| Sbjct: 3134 tatggacccga 3124 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 338 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 397 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 398 ggtagtgaaatagaacgtgaaacc 421 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 108 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 167 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 168 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 226 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 227 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 286 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 287 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 346 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 347 gaccgata 354 |||||||| Sbjct: 241 gaccgata 248
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 375 bits (189), Expect = e-100 Identities = 298/332 (89%), Gaps = 8/332 (2%) Strand = Plus / Plus Query: 271 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 330 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 331 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 511 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 570 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 571 cactgcttatggacccgaccctgggtgatcta 602 |||||||||||||||||| || |||||||||| Sbjct: 670 cactgcttatggacccgaacccgggtgatcta 701 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Plus Query: 26 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 122 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 181 Query: 86 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 145 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 182 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 241 Query: 146 ctaaaccgt 154 ||||||||| Sbjct: 242 ctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 375 bits (189), Expect = e-100 Identities = 298/332 (89%), Gaps = 8/332 (2%) Strand = Plus / Plus Query: 271 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 330 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 331 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 511 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 570 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 571 cactgcttatggacccgaccctgggtgatcta 602 |||||||||||||||||| || |||||||||| Sbjct: 683 cactgcttatggacccgaacccgggtgatcta 714 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Plus Query: 26 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 194 Query: 86 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 145 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 195 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 254 Query: 146 ctaaaccgt 154 ||||||||| Sbjct: 255 ctaaaccgt 263
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 371 bits (187), Expect = 2e-99 Identities = 358/413 (86%), Gaps = 9/413 (2%) Strand = Plus / Plus Query: 193 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 252 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 253 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 312 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 313 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 372 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 373 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 432 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 433 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 492 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 493 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 552 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 553 tcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 || ||| ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 654 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatcc 705 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 32 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 91 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 92 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 151 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 152 cgtgaaaacggggttgtgggagagc 176 || |||| ||||||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 371 bits (187), Expect = 2e-99 Identities = 358/413 (86%), Gaps = 9/413 (2%) Strand = Plus / Minus Query: 193 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 252 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 253 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 312 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 313 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 372 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 373 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 432 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 433 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 492 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 493 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 552 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 553 tcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 || ||| ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 124611 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatcc 124560 Score = 371 bits (187), Expect = 2e-99 Identities = 358/413 (86%), Gaps = 9/413 (2%) Strand = Plus / Plus Query: 193 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 252 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 253 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 312 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 313 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 372 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 373 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 432 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 433 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 492 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 493 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 552 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 553 tcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 || ||| ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 95255 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatcc 95306 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 32 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 91 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 92 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 151 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 152 cgtgaaaacggggttgtgggagagc 176 || |||| ||||||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 32 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 91 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 92 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 151 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 152 cgtgaaaacggggttgtgggagagc 176 || |||| ||||||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 369 bits (186), Expect = 7e-99 Identities = 298/332 (89%), Gaps = 10/332 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 512 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 570 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 571 cactgcttatggacccgaccctgggtgatcta 602 |||||||||||||||||| || |||||||||| Sbjct: 787 cactgcttatggacccgaacccgggtgatcta 818 Score = 182 bits (92), Expect = 9e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 26 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 85 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 239 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 298 Query: 86 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 145 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 299 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 358 Query: 146 ctaaaccg 153 |||||||| Sbjct: 359 ctaaaccg 366
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 363 bits (183), Expect = 4e-97 Identities = 186/187 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 166 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 286 Query: 181 caagcgt 187 ||||||| Sbjct: 287 caagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 363 bits (183), Expect = 4e-97 Identities = 186/187 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 166 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 286 Query: 181 caagcgt 187 ||||||| Sbjct: 287 caagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 361 bits (182), Expect = 2e-96 Identities = 253/274 (92%), Gaps = 2/274 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| || Sbjct: 177140 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagagaa 177198 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177199 ccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 177258 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177259 tagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaata 177318 Query: 181 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 239 ||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 177319 caagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 177378 Query: 240 gtagccgaaagcatcactagcttatgctctgacc 273 |||||||||||||||||||||||| ||||||||| Sbjct: 177379 gtagccgaaagcatcactagcttaggctctgacc 177412 Score = 230 bits (116), Expect = 4e-57 Identities = 140/148 (94%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatcc 177547 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagc 87 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagc 87 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 217 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 276 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 277 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 336 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 337 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 396 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 397 gggtagtgaaatagaacgtgaaaccgt 423 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 349 bits (176), Expect = 7e-93 Identities = 504/603 (83%), Gaps = 19/603 (3%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| |||||| |||| | |||||| |||| ||||||| || Sbjct: 109 attcccgaataggtaaaccttt--aactgc-tgcttattccatg-gcagacaagaga-aa 163 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| ||| Sbjct: 164 cctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccatag 223 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 180 ||| ||| | |||| |||| ||||||||| || |||| ||||||| || ||||||| Sbjct: 224 tagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---agcaata 280 Query: 181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 240 ||| || || |||||| || || || |||| | | ||||||||||| | ||||||| Sbjct: 281 aaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagagtccag 340 Query: 241 tagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtggaatcc 299 ||| |||| |||| ||||||||||| | | ||||||||||||||| || |||||||| Sbjct: 341 tagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatatggaatcc 400 Query: 300 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 359 |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||| Sbjct: 401 cgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaatagtgaa 460 Query: 360 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 419 ||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| ||||| Sbjct: 461 gtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaacatgaaa 520 Query: 420 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 479 | | ||| ||||||||||||||| || || | |||||||| |||||| |||||| Sbjct: 521 ac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttgaa 575 Query: 480 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 539 ||||||| |||||||||||| | |||||| ||||||||| |||| ||||||||||| Sbjct: 576 gaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagcca 630 Query: 540 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgat 599 |||||||||| |||||| |||||| | ||||| ||||| ||||||||| | |||||||| Sbjct: 631 tagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaacttgggtgat 690 Query: 600 cta 602 ||| Sbjct: 691 cta 693
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 345 bits (174), Expect = 1e-91 Identities = 313/356 (87%), Gaps = 10/356 (2%) Strand = Plus / Plus Query: 247 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 306 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 307 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 366 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 367 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 426 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 427 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 486 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 487 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 546 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 547 agcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatcta 602 ||| |||||| ||||||| | ||||| |||||||| |||||| | ||||||||||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatcta 718 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 46 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 105 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 106 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 165 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 166 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 225 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 226 a 226 | Sbjct: 325 a 325
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 366 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 425 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 426 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 485 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 486 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 323 bits (163), Expect = 4e-85 Identities = 292/331 (88%), Gaps = 8/331 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 512 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 571 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 572 actgcttatggacccgaccctgggtgatcta 602 |||| ||| ||||||| || |||||||||| Sbjct: 670 actgtctatagacccgaacccgggtgatcta 700 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 323 bits (163), Expect = 4e-85 Identities = 292/331 (88%), Gaps = 8/331 (2%) Strand = Plus / Minus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 512 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 571 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 572 actgcttatggacccgaccctgggtgatcta 602 |||| ||| ||||||| || |||||||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatcta 114962 Score = 323 bits (163), Expect = 4e-85 Identities = 292/331 (88%), Gaps = 8/331 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 512 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 571 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 572 actgcttatggacccgaccctgggtgatcta 602 |||| ||| ||||||| || |||||||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatcta 87026 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 317 bits (160), Expect = 2e-83 Identities = 331/386 (85%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 217 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 276 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 277 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 336 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 337 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 396 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 397 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 456 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 457 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 516 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 517 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 576 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 4725 Query: 577 ttatggacccgaccctgggtgatcta 602 ||||||||||| || |||||||||| Sbjct: 4726 ctatggacccgaacccgggtgatcta 4751 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 4252 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 150 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 4253 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 317 bits (160), Expect = 2e-83 Identities = 331/386 (85%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 217 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 276 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 277 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 336 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 337 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 396 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 397 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 456 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 457 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 516 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 517 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 576 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 577 ttatggacccgaccctgggtgatcta 602 ||||||||||| || |||||||||| Sbjct: 693 ctatggacccgaacccgggtgatcta 718 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 150 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 317 bits (160), Expect = 2e-83 Identities = 331/386 (85%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 217 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 276 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 277 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 336 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 337 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 396 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 397 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 456 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 457 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 516 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 517 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 576 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 577 ttatggacccgaccctgggtgatcta 602 ||||||||||| || |||||||||| Sbjct: 693 ctatggacccgaacccgggtgatcta 718 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 150 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 291 bits (147), Expect = 1e-75 Identities = 289/335 (86%), Gaps = 11/335 (3%) Strand = Plus / Plus Query: 271 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 330 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 331 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 511 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 570 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 571 cactgcttatggacccgaccctgggtgatctatcc 605 ||||| |||| ||||||| || ||||||||||||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatcc 660 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 agagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||| ||||| |||||||||||||||| ||||||||||| Sbjct: 176 tccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 225 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 283 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 284 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 343 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 344 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 403 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 404 gaaatagaacgtgaaaccgtgctgagctcc 433 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 225 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 283 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 284 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 343 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 344 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 403 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 404 gaaatagaacgtgaaaccgtgctgagctcc 433 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 225 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 283 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 284 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 343 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 344 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 403 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 404 gaaatagaacgtgaaaccgtgctgagctcc 433 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 426 tgagctcccaagcagtgggaggggaaagtgatc 458 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgctta 579 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 225 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 283 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 284 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 343 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 344 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 403 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 404 gaaatagaacgtgaaaccgtgctgagctcc 433 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 426 tgagctcccaagcagtgggaggggaaagtgatc 458 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 481 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 540 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgctta 579 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 287 bits (145), Expect = 2e-74 Identities = 292/337 (86%), Gaps = 13/337 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 512 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 568 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 569 gtcactgcttatggacccgaccctgggtgatctatcc 605 |||||| ||||||||||||| || || |||||||||| Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatcc 697 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 112 ttcccgtagtagcggcgagcgaa 134 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 276 bits (139), Expect = 8e-71 Identities = 217/241 (90%), Gaps = 9/241 (3%) Strand = Plus / Plus Query: 365 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 424 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 425 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 484 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 485 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 544 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 545 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatc 604 |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 605 c 605 | Sbjct: 232 c 232
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 512 gttaagg 518 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 151 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 274 bits (138), Expect = 3e-70 Identities = 163/170 (95%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 79661 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 79603 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79602 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 79543 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 170 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79542 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 270 bits (136), Expect = 5e-69 Identities = 289/338 (85%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 265 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 324 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 325 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 384 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 385 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 444 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 445 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 504 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 505 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 564 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 565 gattgtcactgcttatggacccgaccctgggtgatcta 602 |||||||||| ||||||||||| || |||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatcta 713 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 150 || || ||||||||||||||||||||||| |||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 270 bits (136), Expect = 5e-69 Identities = 283/330 (85%), Gaps = 9/330 (2%) Strand = Plus / Plus Query: 276 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 335 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 336 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 395 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 396 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 455 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 456 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 515 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 516 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 575 || |||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 ag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactg 675 Query: 576 cttatggacccgaccctgggtgatctatcc 605 |||||||||||| || ||||||||||||| Sbjct: 676 tttatggacccgaacccgggtgatctatcc 705 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgat 221 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 172 |||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 222 tccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 260 bits (131), Expect = 5e-66 Identities = 284/335 (84%), Gaps = 10/335 (2%) Strand = Plus / Plus Query: 271 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 330 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 331 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 511 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 570 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 571 cactgcttatggacccgaccctgggtgatctatcc 605 ||||| |||||||||||| || ||||||||||||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatcc 1108 Score = 155 bits (78), Expect = 2e-34 Identities = 136/154 (88%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||| Sbjct: 511 attcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaa 569 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 570 cctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttag 629 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgt 154 ||| ||||||||||| |||| ||||||||||||| Sbjct: 630 tagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 266 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 325 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 326 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 385 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 386 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 445 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 446 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 505 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 506 ggcttggttaagg 518 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 59 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 118 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 119 agtagcggcgagcgaaatgggagcagcctaaacc 152 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 |||| |||| |||||||||| |||| || | ||||| |||||||| |||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 590 cctgggtgatctatcc 605 || ||||||||||||| Sbjct: 652 cccgggtgatctatcc 667
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 250 bits (126), Expect = 5e-63 Identities = 213/239 (89%), Gaps = 11/239 (4%) Strand = Plus / Plus Query: 367 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 426 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 427 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 486 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 487 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 546 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 547 agcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatctatcc 605 |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 228
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 511 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 512 gttaagg 518 ||||||| Sbjct: 611 gttaagg 617 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 30 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 89 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 90 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 149 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 150 accg 153 |||| Sbjct: 246 accg 249 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| ||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 590 cctgggtgatcta 602 || |||||||||| Sbjct: 684 cccgggtgatcta 696
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 200 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 259 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 260 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 319 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 320 accttgcaaggctaaatactcctgggtgaccga 352 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||| || Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 710 gggtgatcta 719
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||| || Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 2479 gggtgatcta 2488
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 240 bits (121), Expect = 4e-60 Identities = 124/125 (99%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 75875 attcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagagacaa 75934 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75935 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 75994 Query: 121 tagcg 125 ||||| Sbjct: 75995 tagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 392 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ggcgaactgaaacatcttag 83 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 390 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 511 ggttaaggg 519 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 58 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 117 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 118 tagtagcggcgagcgaaatgggagcagcctaaac 151 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 238 bits (120), Expect = 2e-59 Identities = 126/128 (98%) Strand = Plus / Plus Query: 478 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 538 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 598 atctatcc 605 |||||||| Sbjct: 122 atctatcc 129
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 236 bits (119), Expect = 7e-59 Identities = 125/127 (98%) Strand = Plus / Plus Query: 479 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 539 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtga 598 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 599 tctatcc 605 ||||||| Sbjct: 121 tctatcc 127
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 219 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 278 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 279 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 338 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 339 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 398 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 399 gtagtgaaatagaacgtgaaa 419 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 135 bits (68), Expect = 2e-28 Identities = 127/145 (87%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 578 tatggacccgaccctgggtgatcta 602 ||||||||||| | ||||||||||| Sbjct: 681 tatggacccgaacttgggtgatcta 705 Score = 109 bits (55), Expect = 1e-20 Identities = 142/167 (85%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| |||| ||| ||| || Sbjct: 108 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gcagacaaaaga-aa 164 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 ||||| |||||||| ||||||||||| |||||||||| |||||||||| ||| || ||| Sbjct: 165 cctggtgaactgaatcatcttagtagacagaggaaaataaagcaaaagttattaccatag 224 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 167 ||| |||||| |||| |||| |||||||||||| |||| ||||||| Sbjct: 225 tagtggcgagtgaaaagggaacagcctaaaccgctaaaatggggttg 271
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 230 bits (116), Expect = 4e-57 Identities = 140/148 (94%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatcc 204
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 230 bits (116), Expect = 4e-57 Identities = 140/148 (94%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 518 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 577 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 578 tatggacccgaccctgggtgatctatcc 605 ||||||||||| |||||||||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatcc 188
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 220 bits (111), Expect = 4e-54 Identities = 184/205 (89%), Gaps = 10/205 (4%) Strand = Plus / Plus Query: 401 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 460 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 520 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 364802 Query: 521 acggaacccaccggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctta 579 ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 364803 --ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 580 tggacccgaccctgggtgatctatc 604 ||||||||| ||||||||||||||| Sbjct: 364861 tggacccgaacctgggtgatctatc 364885 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 346 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 414 gtgaaa 419 ||||| Sbjct: 503 atgaaa 508 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 518 gg 519 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 121/141 (85%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggag 141 ||| ||||| ||||| ||||| Sbjct: 226 tagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 414 gtgaaa 419 ||||| Sbjct: 503 atgaaa 508 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 518 gg 519 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 105 bits (53), Expect = 2e-19 Identities = 128/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || |||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggcgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggagcagcctaa 149 ||| ||||| ||||| |||| || ||||| Sbjct: 226 tagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 449 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 510 tggttaagg 518 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 569 gtcactgcttatggacccgaccctgggtgatcta 602 |||||| ||||||||||||| || |||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatcta 716
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 449 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 510 tggttaagg 518 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 569 gtcactgcttatggacccgaccctgggtgatcta 602 |||||| ||||||||||||| || |||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatcta 716
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 452 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 112 ttcccgtagtagcggcgagcgaaatggga 140 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 569 gtcactgcttatggacccgaccctgggtgatcta 602 |||||| ||||||||||||| ||||| ||||||| Sbjct: 806 gtcacttcttatggacccgaacctggatgatcta 839
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccg 422 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 48 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 107 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 108 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgact 495 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 agcgaaagcgagtcttaatagggc 564 ||||||||||||||| |||||||| Sbjct: 873 agcgaaagcgagtctgaatagggc 896
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 234 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 293 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 294 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 353 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 354 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 413 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 414 gtgaaa 419 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 121/141 (85%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| || Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || || ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| Sbjct: 166 cccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatag 225 Query: 121 tagcggcgagcgaaatgggag 141 ||| ||||| ||||| ||||| Sbjct: 226 tagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 458 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 517 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 518 gg 519 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 48 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 107 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 108 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgact 495 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 131 cgaaatgggagcagcctaaacc 152 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 459 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 542 gcgaaagcgagtcttaatagggcga 566 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 449 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 507 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 61.9 bits (31), Expect = 2e-06 Identities = 66/77 (85%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 530 accggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 586 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 587 gaccctgggtgatctat 603 || || ||||||||||| Sbjct: 745 gaacccgggtgatctat 761
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 390 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 511 ggttaagg 518 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/74 (85%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 588 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 589 ccctgggtgatcta 602 || |||||||||| Sbjct: 751 acccgggtgatcta 764
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 271 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 330 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 331 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 391 cc 392 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 50 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 109 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 110 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 462 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 276 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 335 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 336 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 395 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 396 tgggtagtgaaatagaacgtgaaacc 421 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 1988 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 172 |||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1989 tcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 390 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 391 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 449 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 510 tggttaagg 518 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 390 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 391 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 449 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 450 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 510 tggttaagg 518 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/74 (87%), Gaps = 2/74 (2%) Strand = Plus / Minus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccga 588 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 589 ccctgggtgatcta 602 ||||| ||||||| Sbjct: 155526 acctggatgatcta 155513 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/74 (87%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccga 588 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 589 ccctgggtgatcta 602 ||||| ||||||| Sbjct: 78366 acctggatgatcta 78379
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 332 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 448 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 449 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 509 tt 510 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 131 cgaa 134 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gcgaaagcgagtcttaatagggcg 565 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 131 cgaaatgggagcagcctaaacc 152 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 48.1 bits (24), Expect = 0.034 Identities = 62/72 (86%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgacc 590 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||| | Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 591 ctgggtgatcta 602 | |||||||||| Sbjct: 878 ccgggtgatcta 889
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 127 cgagcgaaatgggagcagcctaaac 151 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 75.8 bits (38), Expect = 1e-10 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgac 589 |||||||| ||||||||| ||||| ||||||||| ||||||||| ||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 590 cctgggtgatctat 603 || ||||||||||| Sbjct: 708 cccgggtgatctat 721
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 761 aacccgggtgatctat 776
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 131 cgaaatgggagcagcctaaacc 152 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 516 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 332 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 448 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 449 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 509 tt 510 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 131 cgaa 134 |||| Sbjct: 219 cgaa 222 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gcgaaagcgagtcttaatagggcg 565 |||||||||||||| ||||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcg 671
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Minus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 151680 aacccgggtgatctat 151665 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 42523 aacccgggtgatctat 42538
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 332 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 448 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 449 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 509 tt 510 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 71 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 131 cgaa 134 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gcgaaagcgagtcttaatagggcg 565 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 761 aacccgggtgatctat 776
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 127 cgagcgaaatgggagcagcctaaac 151 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 509 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 75.8 bits (38), Expect = 1e-10 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgac 589 |||||||| ||||||||| ||||| ||||||||| ||||||||| ||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 590 cctgggtgatctat 603 || ||||||||||| Sbjct: 708 cccgggtgatctat 721
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 695 aacccgggtgatctat 710
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 780 aacccgggtgatctat 795
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 275 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 334 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 335 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 394 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 395 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 454 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 455 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 503 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 392 ccagtgggtagtgaaatagaacgtgaaacc 421 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgact 495 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcgat 567 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgat 657
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 380 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 439 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 440 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 489 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 276 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 335 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 336 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 395 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 396 tgggtagtgaaatagaacgtgaaacc 421 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 221 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 172 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 222 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 281 Query: 173 ga 174 || Sbjct: 282 ga 283 Score = 145 bits (73), Expect = 2e-31 Identities = 128/145 (88%), Gaps = 6/145 (4%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 520 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 521 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 580 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 581 ggacccgaccctgggtgatctatcc 605 |||||||| || ||||||||||||| Sbjct: 681 ggacccgaacccgggtgatctatcc 705
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 276 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 335 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 336 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 395 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 396 tgggtagtgaaatagaacgtgaaacc 421 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 3255 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 172 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 3256 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 3315 Query: 173 ga 174 || Sbjct: 3316 ga 3317 Score = 145 bits (73), Expect = 2e-31 Identities = 128/145 (88%), Gaps = 6/145 (4%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 520 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 521 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 580 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 581 ggacccgaccctgggtgatctatcc 605 |||||||| || ||||||||||||| Sbjct: 3715 ggacccgaacccgggtgatctatcc 3739
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 392 ccagtgggtagtgaaatagaacgtgaaacc 421 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgact 495 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcgat 567 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgat 25466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 275 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 334 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 335 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 394 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 395 gtgggtagtgaaatagaacgtgaaaccgt 423 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 468 gtgcctgttgaagaatgagccggcgactcatagg 501 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 390 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 450 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 495 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 587 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 588 accctgggtgatctat 603 | || ||||||||||| Sbjct: 704 aacccgggtgatctat 719
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 451 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 452 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 511 ggttaagg 518 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 152 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 531 ccggagccgtagcgaaagcgagtcttaatagggcga 566 |||||||| ||||||||||||||||||||||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcga 851
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 519 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/70 (87%), Gaps = 2/70 (2%) Strand = Plus / Plus Query: 535 agccgtagcgaaagcgagtcttaatagggcg--attgtcactgcttatggacccgaccct 592 |||| |||||||||||||||| ||||||||| | |||||| ||||||||||||| || Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 716 gggtgatcta 725
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 447 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 447 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 447 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 53 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 112 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 113 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 390 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 391 cccagtgggtagtgaaatagaacgtgaaaccgt 423 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 113 bits (57), Expect = 7e-22 Identities = 124/145 (85%), Gaps = 6/145 (4%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 519 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg- 687 Query: 520 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgct 577 ||| | |||||||| ||||||||| |||||||||||||||| |||||||| | Sbjct: 688 ---agaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 578 tatggacccgaccctgggtgatcta 602 ||||||||||| || |||||||||| Sbjct: 745 tatggacccgaacccgggtgatcta 769
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 390 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 391 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 447 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 448 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 501 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 125 ggcgagcgaaatgggagcagcctaaac 151 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 541 agcgaaagcgagtcttaatagggcg--attgtcactgcttatggacccgaccctgggtga 598 ||||||||||||||| ||||||||| | ||||| | ||||||||||||| ||||| ||| Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacctggatga 702 Query: 599 tcta 602 |||| Sbjct: 703 tcta 706
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgt 423 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 137 bits (69), Expect = 5e-29 Identities = 132/153 (86%) Strand = Plus / Plus Query: 1 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 60 |||||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||| Sbjct: 97 attcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaa 156 Query: 61 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 120 || |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||| Sbjct: 157 cccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttag 216 Query: 121 tagcggcgagcgaaatgggagcagcctaaaccg 153 ||| ||||||||||| |||| ||| |||||||| Sbjct: 217 tagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 459 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 530 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgac 589 ||||||||| ||||||||| ||||| ||||||||| |||| |||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 590 cctgggtgatcta 602 || |||||||||| Sbjct: 682 cccgggtgatcta 694
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 392 ccagtgggtagtgaaatagaacgtgaaacc 421 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 127 cgagcgaaatgggagcagcctaaacc 152 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 59/66 (89%), Gaps = 3/66 (4%) Strand = Plus / Plus Query: 541 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||||||||| || |||||| ||||||||||||| || ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 598 atctat 603 |||||| Sbjct: 719 atctat 724
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 392 ccagtgggtagtgaaatagaacgtgaaacc 421 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 127 cgagcgaaatgggagcagcctaaacc 152 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgact 495 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 392 ccagtgggtagtgaaatagaacgtgaaacc 421 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 518 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 67 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 126 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 127 cgagcgaaatgggagcagcctaaacc 152 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 59/66 (89%), Gaps = 3/66 (4%) Strand = Plus / Plus Query: 541 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaccctgggtg 597 ||||||||||||||||||||||||| || |||||| ||||||||||||| || ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 598 atctat 603 |||||| Sbjct: 719 atctat 724
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 450 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 451 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 510 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 511 ggttaa 516 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 72 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 131 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 132 gaaatgggagcagcctaaacc 152 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 275 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 334 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 335 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 394 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 395 gtgggtagtgaaatagaacgtgaaaccgt 423 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 459 tctgaccgcgtgcctgttgaagaatgagccggcga 493 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 541 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccctgggtgatc 600 |||||||||||||| |||||||||||| ||||| || | ||||||| || |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 601 ta 602 || Sbjct: 322 ta 323
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 392 ccagt-gggtagtgaaatagaacgtgaaaccgt 423 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 52 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 112 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 153 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 81.8 bits (41), Expect = 2e-12 Identities = 117/142 (82%), Gaps = 4/142 (2%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 520 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 521 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 580 || |||||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 ----aaaaatccggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 581 ggacccgaccctgggtgatcta 602 |||||||| || |||||||||| Sbjct: 830 ggacccgaacccgggtgatcta 851
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||| || Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 532 gggtgatcta 541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 501 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||| || Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 532 gggtgatcta 541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 501 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||| || Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 68 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 127 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 128 gagcgaaatgggagcagcctaaacc 152 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||| || Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||| || Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 532 gggtgatcta 541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 501 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||| || Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||| || Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 272 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 331 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 332 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 391 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 392 ccagtgggtagtgaaatagaacgtgaaaccgtg 424 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 65 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 125 ggcgagcgaaatgggagcagcctaaacc 152 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 533 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaccct 592 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||| || Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 593 gggtgatcta 602 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 461 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 271 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 330 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 331 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 390 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 391 c 391 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 58 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 117 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 118 tagtagcggcgagcgaaatgggagcagcctaaaccg 153 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 460 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 508 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 194 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 243 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,992,380 Number of Sequences: 3902068 Number of extensions: 3992380 Number of successful extensions: 124720 Number of sequences better than 10.0: 26588 Number of HSP's better than 10.0 without gapping: 26417 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 77983 Number of HSP's gapped (non-prelim): 44762 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
