ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2h16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1225 bits (618), Expect = 0.0 Identities = 628/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120006 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119947 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119946 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119887 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119827 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119826 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119767 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119707 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119647 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119587 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119586 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119527 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119467 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119408 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||||| Sbjct: 119407 aatagggcgattgtcactgcttatggaccc 119378 Score = 1225 bits (618), Expect = 0.0 Identities = 628/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94888 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 94947 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94948 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95007 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95008 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95067 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95068 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95127 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95128 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95187 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95188 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95247 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95248 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95307 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95308 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95367 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95368 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95427 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95428 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95486 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||||| Sbjct: 95487 aatagggcgattgtcactgcttatggaccc 95516
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118787 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 118728 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118727 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 118668 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118667 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 118608 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118607 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 118548 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118547 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 118488 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118487 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 118428 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118427 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 118368 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118367 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 118308 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118307 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 118248 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118247 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 118189 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 118188 catagggcgattgtcactgcttatggaccc 118159
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119812 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119752 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119692 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119632 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119572 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119571 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119512 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119511 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119452 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119392 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119273 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 119272 catagggcgattgtcactgcttatggaccc 119243 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95344 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95404 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95464 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95465 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95524 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95525 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95584 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95585 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95644 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95645 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95704 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95764 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95883 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 95884 catagggcgattgtcactgcttatggaccc 95913
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119812 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119752 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119692 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119632 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119572 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119571 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119512 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119511 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119452 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119392 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119273 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 119272 catagggcgattgtcactgcttatggaccc 119243 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95344 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95404 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95464 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95465 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95524 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95525 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95584 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95585 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95644 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95645 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95704 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95764 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95883 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 95884 catagggcgattgtcactgcttatggaccc 95913
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119820 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119761 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119760 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119701 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119700 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119641 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119640 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119581 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119580 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119521 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119520 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119461 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119460 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119401 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119400 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119341 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119281 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119280 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119222 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 119221 catagggcgattgtcactgcttatggaccc 119192 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95230 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95289 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95290 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95349 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95350 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95409 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95410 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95469 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95470 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95529 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95530 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95589 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95590 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95649 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95650 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95709 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95710 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95769 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95770 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95828 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 95829 catagggcgattgtcactgcttatggaccc 95858
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507863 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 31507922 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507923 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 31507982 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507983 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 31508042 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508043 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 31508102 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508103 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 31508162 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508163 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 31508222 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508223 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 31508282 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508283 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 31508342 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508343 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31508402 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508403 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 31508461 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 31508462 catagggcgattgtcactgcttatggaccc 31508491
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84733 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 84674 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84673 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 84614 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84613 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 84554 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84553 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 84494 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84493 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 84434 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84433 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 84374 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84373 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 84314 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84313 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 84254 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84253 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 84194 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84193 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 84135 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 84134 catagggcgattgtcactgcttatggaccc 84105
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119840 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119781 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119780 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119721 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119720 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119661 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119660 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119601 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119600 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119541 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119540 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119481 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119480 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119421 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119420 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119361 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119360 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119301 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119300 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119242 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 119241 catagggcgattgtcactgcttatggaccc 119212 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95278 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95337 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95338 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95397 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95398 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95457 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95458 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95517 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95518 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95577 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95578 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95637 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95638 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95697 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95698 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95757 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95758 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95817 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95818 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95876 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 95877 catagggcgattgtcactgcttatggaccc 95906
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122327 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 122386 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122387 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 122446 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122447 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 122506 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122507 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 122566 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122567 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 122626 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122627 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 122686 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122687 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 122746 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122747 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 122806 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122807 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 122866 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122867 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 122925 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 122926 catagggcgattgtcactgcttatggaccc 122955 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14052 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 14111 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14112 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 14171 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14172 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 14231 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14232 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 14291 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14292 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 14351 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14352 agcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagga 14411 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14412 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 14471 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14472 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 14531 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14532 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 14591 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14592 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 14650 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 14651 catagggcgattgtcactgcttatggaccc 14680
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58559 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 58500 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58499 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 58440 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58439 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 58380 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58379 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 58320 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58319 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 58260 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58259 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 58200 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58199 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 58140 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58139 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 58080 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58079 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 58020 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58019 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 57961 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 57960 catagggcgattgtcactgcttatggaccc 57931
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268212 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9268271 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268272 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9268331 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268332 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9268391 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268392 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9268451 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268452 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9268511 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268512 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9268571 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268572 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9268631 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268632 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9268691 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268692 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9268751 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268752 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9268810 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 9268811 catagggcgattgtcactgcttatggaccc 9268840 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227712 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9227771 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227772 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9227831 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227832 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9227891 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227892 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9227951 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227952 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9228011 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228012 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9228071 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228072 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9228131 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228132 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9228191 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228192 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9228251 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228252 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9228310 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 9228311 catagggcgattgtcactgcttatggaccc 9228340 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164301 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9164360 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164361 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9164420 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164421 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9164480 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164481 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9164540 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164541 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9164600 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164601 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9164660 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164661 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9164720 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164721 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9164780 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164781 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9164840 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164841 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9164899 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 9164900 catagggcgattgtcactgcttatggaccc 9164929 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056126 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9056185 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056186 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9056245 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056246 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9056305 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056306 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9056365 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056366 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9056425 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9056426 agcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagga 9056485 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056486 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9056545 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056546 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9056605 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056606 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9056665 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056666 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9056724 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 9056725 catagggcgattgtcactgcttatggaccc 9056754 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 387 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 447 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938197 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 19938256 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938257 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 19938316 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938317 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 19938376 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938377 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 19938436 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938437 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 19938496 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938497 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 19938556 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938557 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 19938616 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938617 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 19938676 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938677 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19938736 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938737 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 19938795 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 19938796 catagggcgattgtcactgcttatggaccc 19938825 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277234 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10277175 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277174 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10277115 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277114 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10277055 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277054 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10276995 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276994 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10276935 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276934 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10276875 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276874 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10276815 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276814 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10276755 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276754 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10276695 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276694 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 10276636 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 10276635 catagggcgattgtcactgcttatggaccc 10276606 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387064 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10387123 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10387183 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387184 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10387243 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10387303 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387304 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10387363 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387364 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10387423 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10387483 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387484 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10387543 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10387603 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387604 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 10387662 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 10387663 catagggcgattgtcactgcttatggaccc 10387692 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 405 agtaccgtgagggaaaggtgaaaagaacccc 435 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 ttgtgctgctaggcgaagcggttgagtgc 258 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598379 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 31598438 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598439 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 31598498 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598499 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 31598558 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598559 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 31598618 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598619 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 31598678 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598679 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 31598738 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598739 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 31598798 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598799 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 31598858 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598859 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31598918 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598919 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 31598977 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 31598978 catagggcgattgtcactgcttatggaccc 31599007
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525695 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 33525754 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525755 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 33525814 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525815 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 33525874 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525875 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 33525934 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525935 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 33525994 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525995 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 33526054 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526055 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 33526114 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526115 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 33526174 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526175 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 33526234 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526235 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 33526293 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 33526294 catagggcgattgtcactgcttatggaccc 33526323 Score = 319 bits (161), Expect = 6e-84 Identities = 174/177 (98%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 409 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 468 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 469 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 528 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 529 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 585 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 423 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 482 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 483 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 532 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 416 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 454 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47846 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 47787 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47786 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 47727 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47726 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 47667 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47666 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 47607 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47606 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 47547 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47546 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 47487 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47486 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 47427 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47426 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 47367 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47366 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 47307 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47306 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 47248 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 47247 catagggcgattgtcactgcttatggaccc 47218
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70892 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 70951 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70952 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 71011 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71012 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 71071 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71072 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 71131 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71132 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 71191 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71192 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 71251 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71252 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 71311 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71312 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 71371 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71372 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 71431 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71432 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 71490 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 71491 catagggcgattgtcactgcttatggaccc 71520 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 183 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 303 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 363 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 423 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 483 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 543 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 603 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 662 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 663 catagggcgattgtcactgcttatggaccc 692
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949473 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 19949532 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949533 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 19949592 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949593 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 19949652 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949653 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 19949712 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949713 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 19949772 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949773 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 19949832 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949833 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 19949892 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949893 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 19949952 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949953 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19950012 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950013 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 19950071 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 19950072 catagggcgattgtcactgcttatggaccc 19950101 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283273 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10283214 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283213 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10283154 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283153 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10283094 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283093 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10283034 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283033 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10282974 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282973 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10282914 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282913 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10282854 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282853 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10282794 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282793 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10282734 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282733 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 10282675 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 10282674 catagggcgattgtcactgcttatggaccc 10282645 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393103 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10393162 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393163 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10393222 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393223 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10393282 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393283 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10393342 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393343 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10393402 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393403 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10393462 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393463 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10393522 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393523 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10393582 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393583 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10393642 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393643 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 10393701 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 10393702 catagggcgattgtcactgcttatggaccc 10393731 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 ttgtgctgctaggcgaagcggttgagtgc 258 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119814 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119755 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119754 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119695 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119694 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119635 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119634 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119575 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119574 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119515 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119514 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119455 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119454 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119395 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119394 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119335 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119334 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119275 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119274 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119216 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 119215 catagggcgattgtcactgcttatggaccc 119186 Score = 1209 bits (610), Expect = 0.0 Identities = 626/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95225 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95284 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95344 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95404 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95464 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95465 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95524 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95525 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95584 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95585 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95644 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95645 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95704 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95764 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95823 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 95824 catagggcgattgtcactgcttatggaccc 95853
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 858 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 798 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 738 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 678 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 618 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 558 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 498 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 438 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 378 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 377 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 319 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 318 catagggcgattgtcactgcttatggaccc 289
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140860 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 140919 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140920 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 140979 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140980 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 141039 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141040 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 141099 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141100 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 141159 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141160 agcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagga 141219 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141220 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 141279 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141280 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 141339 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141399 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141400 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 141458 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 141459 catagggcgattgtcactgcttatggaccc 141488
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93456 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 93515 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93516 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 93575 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93576 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 93635 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93636 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 93695 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93696 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 93755 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93756 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 93815 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93816 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 93875 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93876 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 93935 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93936 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 93995 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93996 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 94054 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 94055 catagggcgattgtcactgcttatggaccc 94084
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20287 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 20346 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20347 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 20406 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20407 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 20466 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20467 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 20526 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20527 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 20586 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20587 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 20646 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20647 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 20706 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20707 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 20766 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20767 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 20826 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20827 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 20885 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 20886 catagggcgattgtcactgcttatggaccc 20915 Score = 1185 bits (598), Expect = 0.0 Identities = 623/630 (98%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44831 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 44772 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44771 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 44712 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44711 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 44652 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44651 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 44592 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44591 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 44532 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44531 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 44472 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44471 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 44412 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44411 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 44352 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44351 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 44292 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||| Sbjct: 44291 taggcagtggc-ttggttaagggaatggaaccctccggagccgtagtgaaagcgagtctt 44233 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 44232 catagggcgattgtcactgcttatggaccc 44203
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 1401 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 1341 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 1281 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1280 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 1221 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 1161 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1160 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 1101 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1100 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 1041 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 981 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 921 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 920 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 862 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 861 catagggcgattgtcactgcttatggaccc 832
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27520 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 27579 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27580 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 27639 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27640 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 27699 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27700 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 27759 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27760 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 27819 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27820 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 27879 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27880 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 27939 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27940 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 27999 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28000 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 28059 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28060 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 28118 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 28119 catagggcgattgtcactgcttatggaccc 28148
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123670 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123611 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123610 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 123551 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123550 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 123491 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123490 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 123431 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123430 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 123371 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123370 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 123311 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123310 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 123251 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123250 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 123191 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123190 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123131 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123130 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123072 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 123071 catagggcgattgtcactgcttatggaccc 123042 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99167 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 99226 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99227 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 99286 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99287 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 99346 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99347 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 99406 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99407 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 99466 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99467 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 99526 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99527 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 99586 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99587 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 99646 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99647 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99706 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99707 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 99765 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 99766 catagggcgattgtcactgcttatggaccc 99795
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124387 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 124328 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124327 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 124268 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124267 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 124208 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124207 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 124148 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124147 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 124088 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124087 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 124028 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124027 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 123968 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123967 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 123908 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123907 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123848 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123847 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123789 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 123788 catagggcgattgtcactgcttatggaccc 123759 Score = 1201 bits (606), Expect = 0.0 Identities = 625/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99844 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 99903 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99904 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 99963 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99964 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 100023 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100024 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 100083 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100084 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 100143 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100144 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 100203 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100204 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 100263 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100264 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 100323 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100324 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 100383 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100384 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 100442 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 100443 catagggcgattgtcactgcttatggaccc 100472
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1193 bits (602), Expect = 0.0 Identities = 624/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242069 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9242010 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242009 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9241950 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241949 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatg 9241890 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241889 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9241830 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241829 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9241770 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241769 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9241710 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241709 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9241650 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241649 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9241590 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9241589 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 9241530 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241529 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9241471 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 9241470 catagggcgattgtcactgcttatggaccc 9241441 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 112 actgaaacatcttagtagccagaggaaaagaaag 145 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1193 bits (602), Expect = 0.0 Identities = 624/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53282 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 53223 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53222 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 53163 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53162 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatg 53103 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53102 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 53043 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53042 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 52983 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52982 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 52923 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52922 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 52863 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52862 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 52803 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 52802 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 52743 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52742 taggcagtggc-ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 52684 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 52683 catagggcgattgtcactgcttatggaccc 52654
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1154 bits (582), Expect = 0.0 Identities = 620/630 (98%), Gaps = 2/630 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123609 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123550 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123549 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 123490 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123489 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 123430 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123429 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 123370 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 123369 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 123310 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123309 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 123251 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123250 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 123191 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123190 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 123131 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123130 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123071 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123070 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123012 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 123011 catagggcgattgtcactgcttatggaccc 122982 Score = 1154 bits (582), Expect = 0.0 Identities = 620/630 (98%), Gaps = 2/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99128 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 99187 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 99188 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 99247 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99248 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 99307 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 99308 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 99367 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 99368 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 99427 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99428 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 99486 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99487 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 99546 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99547 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 99606 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99607 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99666 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99667 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 99725 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 99726 catagggcgattgtcactgcttatggaccc 99755
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1154 bits (582), Expect = 0.0 Identities = 620/630 (98%), Gaps = 2/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5481 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 5540 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5541 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 5600 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5601 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 5660 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5661 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 5720 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 5721 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 5780 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5781 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 5839 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5840 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 5899 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5900 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 5959 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 6019 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6020 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 6078 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 6079 catagggcgattgtcactgcttatggaccc 6108
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1154 bits (582), Expect = 0.0 Identities = 620/630 (98%), Gaps = 2/630 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 128 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 188 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 248 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 249 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 308 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 309 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 368 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 427 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 487 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 547 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 607 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 608 taggcagtggc-ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 666 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 667 catagggcgattgtcactgcttatggaccc 696
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1150 bits (580), Expect = 0.0 Identities = 596/600 (99%), Gaps = 1/600 (0%) Strand = Plus / Plus Query: 31 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 90 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 91 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 151 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 211 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 271 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 330 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 331 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 391 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 451 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 511 gtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 570 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 539 Query: 571 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 540 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 599
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1134 bits (572), Expect = 0.0 Identities = 591/596 (99%), Gaps = 1/596 (0%) Strand = Plus / Plus Query: 35 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 94 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 215 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 275 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 334 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 335 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 395 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 455 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 515 ctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaaccca 574 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaaccca 539 Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 540 ccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 595
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1092 bits (551), Expect = 0.0 Identities = 564/567 (99%), Gaps = 1/567 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 120 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 180 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 240 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 300 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 360 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 420 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 480 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 540 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 600 Query: 541 taggcagtggctttggttaagggaacg 567 ||||||||||| ||||||||||||||| Sbjct: 601 taggcagtggc-ttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1074 bits (542), Expect = 0.0 Identities = 561/566 (99%), Gaps = 1/566 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 80 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 140 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 200 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 201 ggagcagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgcta 260 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 320 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 380 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 440 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 500 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 cagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 560 Query: 541 taggcagtggctttggttaagggaac 566 ||||||||||| |||||||||||||| Sbjct: 561 taggcagtggc-ttggttaagggaac 585
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 991 bits (500), Expect = 0.0 Identities = 600/630 (95%), Gaps = 10/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134157 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 134098 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134097 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 134039 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134038 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 133979 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 133978 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 133919 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 133918 ggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 133859 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133858 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 133799 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133798 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 133739 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 133738 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 133682 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133681 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 133622 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133621 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 133568 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 133567 catagggcgattgtcactgcttatggaccc 133538 Score = 991 bits (500), Expect = 0.0 Identities = 600/630 (95%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103814 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 103873 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103874 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 103932 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103933 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 103992 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103993 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 104052 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 104053 ggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 104112 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104113 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104172 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104173 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 104232 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 104233 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104289 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104290 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 104349 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104350 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 104403 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 104404 catagggcgattgtcactgcttatggaccc 104433
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 975 bits (492), Expect = 0.0 Identities = 598/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139520 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 139461 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139460 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 139402 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139401 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 139342 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139341 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 139282 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||| | |||||||||||||| | |||||||||||||||||||||||| Sbjct: 139281 ggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcact 139222 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139221 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 139162 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139161 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 139102 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| Sbjct: 139101 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 139045 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139044 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 138985 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 138984 taggcagtggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagtctt 138931 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 138930 catagggcaattgtcactgcttatggaccc 138901 Score = 975 bits (492), Expect = 0.0 Identities = 598/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110425 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 110484 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110485 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 110543 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110544 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 110603 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110604 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 110663 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||| | |||||||||||||| | |||||||||||||||||||||||| Sbjct: 110664 ggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcact 110723 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110724 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 110783 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110784 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 110843 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| Sbjct: 110844 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 110900 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110901 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 110960 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 110961 taggcagtggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagtctt 111014 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 111015 catagggcaattgtcactgcttatggaccc 111044
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 975 bits (492), Expect = 0.0 Identities = 598/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127798 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 127739 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127738 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 127680 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 127679 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 127620 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127619 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgcta 127560 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | |||||||||||||||| ||||||| Sbjct: 127559 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcact 127500 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127499 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 127440 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127439 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 127380 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||| Sbjct: 127379 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaag 127323 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127322 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 127263 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| Sbjct: 127262 taggcagtggctt-ggttaagggaat-----ccaccgtagccgtagcgaaagcgagtctt 127209 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 127208 catagggcgattgtcactgcttatggaccc 127179 Score = 975 bits (492), Expect = 0.0 Identities = 598/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107124 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 107183 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107184 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 107242 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107243 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 107302 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107303 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgcta 107362 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | |||||||||||||||| ||||||| Sbjct: 107363 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcact 107422 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107423 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 107482 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107483 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 107542 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||| Sbjct: 107543 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaag 107599 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107600 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 107659 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| Sbjct: 107660 taggcagtggctt-ggttaagggaat-----ccaccgtagccgtagcgaaagcgagtctt 107713 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| Sbjct: 107714 catagggcgattgtcactgcttatggaccc 107743
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 967 bits (488), Expect = 0.0 Identities = 597/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 142042 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaa 141983 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141982 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 141924 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141923 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 141864 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141863 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 141804 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||| | |||||||||||||| | ||||||||| |||||||||||||| Sbjct: 141803 ggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcact 141744 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141743 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 141684 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141683 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 141624 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| Sbjct: 141623 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 141567 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141566 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141507 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141506 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 141453 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 141452 catagggcaattgtcactgcttatggaccc 141423 Score = 967 bits (488), Expect = 0.0 Identities = 597/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 111615 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaa 111674 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 111675 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 111733 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111734 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 111793 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111794 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 111853 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||| | |||||||||||||| | ||||||||| |||||||||||||| Sbjct: 111854 ggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcact 111913 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111914 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 111973 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111974 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 112033 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| Sbjct: 112034 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 112090 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112091 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 112150 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112151 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 112204 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 112205 catagggcaattgtcactgcttatggaccc 112234
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 965 bits (487), Expect = 0.0 Identities = 597/630 (94%), Gaps = 14/630 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 134856 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134855 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 134797 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134796 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 134737 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134736 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 134677 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || |||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 134676 ggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcact 134617 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134616 agcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 134557 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134556 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 134497 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| Sbjct: 134496 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 134440 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134439 cagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactca 134384 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134383 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 134330 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 134329 catagggcaattgtcactgcttatggaccc 134300 Score = 965 bits (487), Expect = 0.0 Identities = 597/630 (94%), Gaps = 14/630 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105367 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 105426 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105427 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105485 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105545 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105546 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105605 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || |||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 105606 ggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcact 105665 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 agcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 105725 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105726 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 105785 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| Sbjct: 105786 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 105842 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105843 cagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactca 105898 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105899 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 105952 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 105953 catagggcaattgtcactgcttatggaccc 105982
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 961 bits (485), Expect = 0.0 Identities = 597/630 (94%), Gaps = 12/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136525 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 136466 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136465 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136407 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136406 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136347 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136346 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 136287 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 136286 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 136227 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136226 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 136167 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136166 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 136107 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 136106 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 136050 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 136049 cagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 135992 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135991 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 135938 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 135937 catagggcaattgtcactgcttatggaccc 135908 Score = 961 bits (485), Expect = 0.0 Identities = 597/630 (94%), Gaps = 12/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105900 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 105959 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105960 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106018 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106019 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106078 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106079 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106138 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 106139 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 106198 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106199 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 106258 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106259 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 106318 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 106319 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 106375 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106376 cagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 106433 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106434 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 106487 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 106488 catagggcaattgtcactgcttatggaccc 106517
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 955 bits (482), Expect = 0.0 Identities = 485/486 (99%) Strand = Plus / Plus Query: 68 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 128 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 188 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 248 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 308 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 368 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 428 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 488 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 548 tggctt 553 |||||| Sbjct: 481 tggctt 486
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 944 bits (476), Expect = 0.0 Identities = 595/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132709 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 132650 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132649 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 132591 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132590 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 132531 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132530 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 132471 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 132470 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 132411 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132410 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 132351 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132350 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 132291 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 132290 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 132234 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 132233 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132175 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132174 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 132121 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 132120 catagggcaattgtcactgcttatggaccc 132091 Score = 944 bits (476), Expect = 0.0 Identities = 595/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104169 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 104228 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104229 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 104287 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104288 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104347 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104348 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 104407 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 104408 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 104467 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104468 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104527 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104528 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 104587 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 104588 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104644 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 104645 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104703 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104704 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 104757 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 104758 catagggcaattgtcactgcttatggaccc 104787
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 944 bits (476), Expect = 0.0 Identities = 595/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 132932 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 132873 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132872 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 132814 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132813 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 132754 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 132753 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 132694 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 132693 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 132634 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132633 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 132574 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132573 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 132514 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 132513 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 132457 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 132456 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132398 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132397 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 132344 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 132343 catagggcaattgtcactgcttatggaccc 132314 Score = 944 bits (476), Expect = 0.0 Identities = 595/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 103832 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 103891 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103892 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 103950 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103951 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104010 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 104011 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 104070 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 104071 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 104130 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104131 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104190 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104191 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 104250 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 104251 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104307 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 104308 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104366 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104367 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 104420 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 104421 catagggcaattgtcactgcttatggaccc 104450
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 944 bits (476), Expect = 0.0 Identities = 595/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132702 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 132643 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132642 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 132584 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132583 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 132524 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132523 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 132464 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 132463 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 132404 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132403 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 132344 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132343 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 132284 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 132283 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 132227 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 132226 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132168 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132167 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 132114 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 132113 catagggcaattgtcactgcttatggaccc 132084 Score = 944 bits (476), Expect = 0.0 Identities = 595/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104167 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 104226 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104227 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 104285 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104286 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104345 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104346 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 104405 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 104406 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 104465 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104466 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104525 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104526 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 104585 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 104586 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104642 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 104643 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104701 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104702 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 104755 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 104756 catagggcaattgtcactgcttatggaccc 104785
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 940 bits (474), Expect = 0.0 Identities = 487/490 (99%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 141 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 201 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 261 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 320 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 321 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 381 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 441 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 419 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 420 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 479 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 480 ttatggaccc 489
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 936 bits (472), Expect = 0.0 Identities = 594/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131601 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 131542 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131541 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 131483 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131482 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 131423 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131422 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 131363 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 131362 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 131303 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131302 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 131243 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131242 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 131183 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 131182 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 131126 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 131125 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 131067 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131066 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 131013 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 131012 catagggcaattgtcactgcttatggaccc 130983 Score = 936 bits (472), Expect = 0.0 Identities = 594/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103034 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 103093 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103094 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 103152 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103153 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 103212 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103213 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 103272 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 103273 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 103332 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103333 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 103392 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103393 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 103452 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 103453 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 103509 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 103510 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 103568 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103569 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 103622 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 103623 catagggcaattgtcactgcttatggaccc 103652
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 936 bits (472), Expect = 0.0 Identities = 485/488 (99%), Gaps = 1/488 (0%) Strand = Plus / Plus Query: 143 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 203 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 263 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 322 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 323 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 383 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 443 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagg 419 Query: 563 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 622 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 420 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 623 atggaccc 630 |||||||| Sbjct: 480 atggaccc 487
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 936 bits (472), Expect = 0.0 Identities = 485/488 (99%), Gaps = 1/488 (0%) Strand = Plus / Plus Query: 143 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 203 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 263 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 322 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 323 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 383 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 443 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagg 419 Query: 563 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 622 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 420 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 623 atggaccc 630 |||||||| Sbjct: 480 atggaccc 487
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 936 bits (472), Expect = 0.0 Identities = 594/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 133893 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 133834 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133833 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 133775 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133774 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 133715 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 133714 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgcta 133655 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 133654 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 133595 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133594 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 133535 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133534 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 133475 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 133474 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 133418 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 133417 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 133359 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133358 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 133305 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 133304 catagggcaattgtcactgcttatggaccc 133275 Score = 936 bits (472), Expect = 0.0 Identities = 594/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 104756 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 104815 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104816 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 104874 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104875 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104934 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 104935 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgcta 104994 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 104995 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 105054 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105055 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 105114 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105115 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 105174 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 105175 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 105231 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 105232 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 105290 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105291 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 105344 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 105345 catagggcaattgtcactgcttatggaccc 105374
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 934 bits (471), Expect = 0.0 Identities = 484/487 (99%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 144 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 204 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 264 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 323 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 324 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 384 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 444 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 563 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaaggg 419 Query: 564 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 623 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 420 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 479 Query: 624 tggaccc 630 ||||||| Sbjct: 480 tggaccc 486
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 934 bits (471), Expect = 0.0 Identities = 484/487 (99%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 144 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 204 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 264 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 323 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 324 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 384 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 444 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 563 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaaggg 422 Query: 564 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 623 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 423 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 482 Query: 624 tggaccc 630 ||||||| Sbjct: 483 tggaccc 489
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 930 bits (469), Expect = 0.0 Identities = 482/485 (99%), Gaps = 1/485 (0%) Strand = Plus / Plus Query: 146 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 206 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 266 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 325 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 326 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 386 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 446 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 506 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 565 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 419 Query: 566 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 625 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 420 cggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 479 Query: 626 gaccc 630 ||||| Sbjct: 480 gaccc 484
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 928 bits (468), Expect = 0.0 Identities = 593/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140294 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 140235 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 140234 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 140176 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140175 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 140116 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 140115 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 140056 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||| || ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 140055 ggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 139996 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139995 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 139936 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139935 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 139876 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | || ||||||| Sbjct: 139875 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaag 139819 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 139818 cagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 139760 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 139759 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 139706 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 139705 catagggcaattgtcactgcttatggaccc 139676 Score = 928 bits (468), Expect = 0.0 Identities = 593/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 109766 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 109825 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 109826 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 109884 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109885 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 109944 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 109945 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 110004 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||| || ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 110005 ggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 110064 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110065 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 110124 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110125 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 110184 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | || ||||||| Sbjct: 110185 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaag 110241 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 110242 cagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 110300 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110301 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 110354 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 110355 catagggcaattgtcactgcttatggaccc 110384
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 928 bits (468), Expect = 0.0 Identities = 593/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 65 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 124 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 125 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 183 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgcta 303 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||| Sbjct: 304 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatcact 363 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 423 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 483 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 484 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 540 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 541 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 599 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 600 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 653 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 654 catagggcaattgtcactgcttatggaccc 683
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 136234 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 136175 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136174 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136116 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136115 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136056 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136055 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135996 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135995 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135936 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135935 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135876 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135875 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135816 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135815 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135759 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135758 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135701 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135700 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135647 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 135646 tcatagggcaattgtcactgcttatggaccc 135616 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 106396 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 106455 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106456 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106514 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106515 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106574 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106575 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106634 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 106635 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106694 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106695 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106754 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106755 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106814 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106815 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106871 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106872 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106929 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106930 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106983 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106984 tcatagggcaattgtcactgcttatggaccc 107014
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 136872 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 136813 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136812 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136754 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136753 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136694 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136693 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 136634 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 136633 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 136574 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136573 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 136514 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136513 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 136454 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 136453 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 136397 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 136396 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 136339 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 136338 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 136285 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 136284 tcatagggcaattgtcactgcttatggaccc 136254 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 106685 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 106744 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106745 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106803 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106804 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106863 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106864 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106923 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 106924 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106983 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106984 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 107043 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107044 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 107103 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 107104 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 107160 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 107161 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 107218 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107219 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 107272 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 107273 tcatagggcaattgtcactgcttatggaccc 107303
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 1590 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 1649 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1650 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 1708 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1709 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 1768 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1769 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 1828 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1829 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 1888 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1889 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 1948 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1949 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 2008 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 2009 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 2065 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2066 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 2123 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2124 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 2177 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 2178 tcatagggcaattgtcactgcttatggaccc 2208
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135480 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135421 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135420 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135362 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135361 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135302 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135301 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135242 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135241 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135182 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135181 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135122 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135121 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135062 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135061 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135005 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135004 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 134947 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134946 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 134893 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 134892 tcatagggcaattgtcactgcttatggaccc 134862 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105556 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105615 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105616 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105674 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105675 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105734 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105735 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105794 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 105795 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 105854 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105855 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105914 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105915 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105974 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 105975 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106031 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106089 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106090 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106143 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106144 tcatagggcaattgtcactgcttatggaccc 106174
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135615 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135556 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135555 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135497 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135496 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135437 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135436 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135377 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135376 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135317 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135316 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135257 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135256 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135197 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135196 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135140 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135139 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135082 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135081 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135028 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 135027 tcatagggcaattgtcactgcttatggaccc 134997 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105728 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105787 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105788 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105846 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105847 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105906 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105907 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105966 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 105967 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106026 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106027 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106086 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106087 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106146 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106147 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106203 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106204 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106261 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106262 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106315 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106316 tcatagggcaattgtcactgcttatggaccc 106346
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135613 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135554 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135553 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135495 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135494 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135435 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135434 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135375 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135374 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135315 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135314 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135255 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135254 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135195 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135194 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135138 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135137 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135080 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135079 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135026 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 135025 tcatagggcaattgtcactgcttatggaccc 134995 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105725 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105784 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105785 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105843 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105844 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105903 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105904 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105963 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 105964 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106023 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106024 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106083 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106084 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106143 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106144 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106200 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106201 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106258 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106259 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106312 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106313 tcatagggcaattgtcactgcttatggaccc 106343
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135525 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135466 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135465 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135407 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135347 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135346 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135287 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135286 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135227 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135226 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135167 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135107 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135106 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135050 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135049 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 134992 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134991 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 134938 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 134937 tcatagggcaattgtcactgcttatggaccc 134907 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105603 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105662 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105663 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105721 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105722 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105781 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105782 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105841 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 105842 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 105901 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105902 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105961 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105962 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106021 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106022 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106078 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106079 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106136 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106137 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106190 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106191 tcatagggcaattgtcactgcttatggaccc 106221
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 136232 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 136173 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136172 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136114 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136113 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136054 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136053 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135994 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135993 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135934 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135933 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135874 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135873 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135814 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135813 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135757 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135756 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135699 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135698 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135645 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 135644 tcatagggcaattgtcactgcttatggaccc 135614 Score = 924 bits (466), Expect = 0.0 Identities = 594/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 106394 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 106453 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106454 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106512 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106572 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106573 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106632 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 106633 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106692 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106693 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106752 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106753 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106812 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106813 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106869 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106870 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106927 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106928 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106981 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106982 tcatagggcaattgtcactgcttatggaccc 107012
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 920 bits (464), Expect = 0.0 Identities = 592/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || |||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 313 ggcgaagcagtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 549 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 550 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 608 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 609 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 662 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 663 cgtagggcaattgtcactgcttatggaccc 692
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 916 bits (462), Expect = 0.0 Identities = 593/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 135963 gacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaa 135904 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135903 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135845 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135844 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135785 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135784 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135725 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135724 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135665 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135664 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135605 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135604 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135545 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135544 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135488 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135487 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135430 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135429 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135376 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 135375 tcatagggcaattgtcactgcttatggaccc 135345 Score = 916 bits (462), Expect = 0.0 Identities = 593/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 106175 gacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaa 106234 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106235 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106293 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106294 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106353 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106354 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106413 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 106414 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106473 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106533 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106534 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106593 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106594 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106650 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106651 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106708 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106709 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106762 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106763 tcatagggcaattgtcactgcttatggaccc 106793
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 916 bits (462), Expect = 0.0 Identities = 593/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135492 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135433 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135432 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135374 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135373 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135314 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135313 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135254 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 135253 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135194 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135193 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135134 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135133 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135074 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 135073 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135017 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135016 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgacta 134959 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134958 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 134905 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 134904 tcatagggcaattgtcactgcttatggaccc 134874 Score = 916 bits (462), Expect = 0.0 Identities = 593/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105570 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105629 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105630 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105688 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105748 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105749 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105808 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 105809 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 105868 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105869 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105928 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105929 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105988 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 105989 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106045 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106046 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgacta 106103 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106104 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106157 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 106158 tcatagggcaattgtcactgcttatggaccc 106188
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 912 bits (460), Expect = 0.0 Identities = 591/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 131725 gacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaa 131666 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131665 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 131607 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131606 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 131547 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131546 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 131487 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||| | || |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 131486 ggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcact 131427 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131426 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 131367 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131366 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 131307 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||| Sbjct: 131306 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaag 131250 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 131249 cagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactca 131191 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131190 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 131137 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 131136 catagggcaattgtcactgcttatggaccc 131107 Score = 912 bits (460), Expect = 0.0 Identities = 591/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 101720 gacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaa 101779 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 101780 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 101838 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101839 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 101898 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 101899 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 101958 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||| | || |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 101959 ggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcact 102018 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102019 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 102078 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102079 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 102138 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||| Sbjct: 102139 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaag 102195 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 102196 cagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactca 102254 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 102255 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 102308 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 102309 catagggcaattgtcactgcttatggaccc 102338
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 906 bits (457), Expect = 0.0 Identities = 592/631 (93%), Gaps = 12/631 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 66 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 125 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 126 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaaca 184 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaat 179 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 185 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaat 244 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 245 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 304 Query: 240 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 305 aggcgaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatcac 364 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 424 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 425 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 484 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 485 gggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccg---taagctcccaa 541 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 600 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 601 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 654 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 655 tcatagggcaattgtcactgcttatggaccc 685
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 904 bits (456), Expect = 0.0 Identities = 590/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 106071 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 106130 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106131 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106189 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106190 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106249 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106250 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106309 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || ||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 106310 ggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcact 106369 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106370 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 106429 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106430 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 106489 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||| Sbjct: 106490 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 106546 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106547 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 106605 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106606 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 106659 Query: 601 aatagggcgattgtcactgcttatggaccc 630 || |||| ||||||||||||||||||||| Sbjct: 106660 catggggcaattgtcactgcttatggaccc 106689 Score = 854 bits (431), Expect = 0.0 Identities = 589/633 (93%), Gaps = 14/633 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 135838 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 135779 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135778 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135720 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135719 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135660 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgct 239 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 135659 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgct 135600 Query: 240 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 ||||||||| || ||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 135599 aggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcac 135540 Query: 300 tagcttatg-ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caa 357 ||||||| | | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135539 tagcttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaa 135480 Query: 358 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135479 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 135420 Query: 418 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477 || ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| || Sbjct: 135419 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttcc 135363 Query: 478 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537 ||||||||||||| | | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 135362 aagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgac 135304 Query: 538 tcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 597 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135303 tcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagt 135250 Query: 598 cttaatagggcgattgtcactgcttatggaccc 630 ||| || |||| ||||||||||||||||||||| Sbjct: 135249 cttcatggggcaattgtcactgcttatggaccc 135217
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 904 bits (456), Expect = 0.0 Identities = 590/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 136114 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 136055 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136054 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135996 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135995 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135936 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135935 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135876 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || ||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 135875 ggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcact 135816 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135815 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 135756 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135755 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 135696 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||| Sbjct: 135695 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 135639 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135638 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 135580 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135579 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 135526 Query: 601 aatagggcgattgtcactgcttatggaccc 630 || |||| ||||||||||||||||||||| Sbjct: 135525 catggggcaattgtcactgcttatggaccc 135496 Score = 904 bits (456), Expect = 0.0 Identities = 590/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 106293 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 106352 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106353 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106411 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106412 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106471 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106472 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106531 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || ||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 106532 ggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcact 106591 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106592 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 106651 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106652 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 106711 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||| Sbjct: 106712 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 106768 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106769 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 106827 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106828 taggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 106881 Query: 601 aatagggcgattgtcactgcttatggaccc 630 || |||| ||||||||||||||||||||| Sbjct: 106882 catggggcaattgtcactgcttatggaccc 106911
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 900 bits (454), Expect = 0.0 Identities = 592/631 (93%), Gaps = 14/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 41 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 100 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 101 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 159 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 219 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 220 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 279 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | ||| ||| |||||| | ||||| ||||||||||||||||||||||||| Sbjct: 280 ggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagtagccgaaagcatcac 338 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 398 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 458 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 459 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 515 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 516 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 573 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 574 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 627 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 628 tcatagggcaattgtcactgcttatggaccc 658
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 892 bits (450), Expect = 0.0 Identities = 590/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 139438 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 139379 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 139378 cctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaaca 139320 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139319 tcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 139260 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 139259 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 139200 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 139199 ggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcact 139140 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139139 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 139080 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139079 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 139020 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 139019 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 138963 Query: 481 cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 |||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 138962 cagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 138905 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138904 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 138851 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 138850 tcatagggcaattgtcactgcttatggaccc 138820 Score = 892 bits (450), Expect = 0.0 Identities = 590/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 109659 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 109718 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 109719 cctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaaca 109777 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109778 tcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 109837 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 109838 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 109897 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 109898 ggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcact 109957 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109958 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 110017 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110018 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 110077 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 110078 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 110134 Query: 481 cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 |||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110135 cagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 110192 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110193 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 110246 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 110247 tcatagggcaattgtcactgcttatggaccc 110277
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 888 bits (448), Expect = 0.0 Identities = 591/633 (93%), Gaps = 13/633 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 139647 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 139588 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139587 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 139529 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139528 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 139469 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139468 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 139409 Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| || || ||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 139408 ggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcac 139349 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139348 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 139289 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139288 accaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaa 139229 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 139228 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 139172 Query: 480 gcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537 ||||||||||| || | | ||||||||||||||||||||||||||||||||||||| Sbjct: 139171 gcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgac 139112 Query: 538 tcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 597 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139111 tcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagt 139058 Query: 598 cttaatagggcgattgtcactgcttatggaccc 630 ||| ||||||| ||||||||||||||||||||| Sbjct: 139057 cttcatagggcaattgtcactgcttatggaccc 139025 Score = 888 bits (448), Expect = 0.0 Identities = 591/633 (93%), Gaps = 13/633 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 109652 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 109711 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 109712 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 109770 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109771 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 109830 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 109831 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 109890 Query: 241 ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| || || ||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 109891 ggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcac 109950 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109951 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110010 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110011 accaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaa 110070 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 110071 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 110127 Query: 480 gcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537 ||||||||||| || | | ||||||||||||||||||||||||||||||||||||| Sbjct: 110128 gcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgac 110187 Query: 538 tcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 597 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110188 tcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagt 110241 Query: 598 cttaatagggcgattgtcactgcttatggaccc 630 ||| ||||||| ||||||||||||||||||||| Sbjct: 110242 cttcatagggcaattgtcactgcttatggaccc 110274
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 880 bits (444), Expect = 0.0 Identities = 450/452 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 124 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 184 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 244 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 304 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 364 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 424 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 484 Query: 421 ggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||| Sbjct: 485 ggtgaaaagaacccccagtgggtagtgaaata 516
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 878 bits (443), Expect = 0.0 Identities = 591/632 (93%), Gaps = 15/632 (2%) Strand = Plus / Plus Query: 2 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 61 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaac 1892 Query: 62 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 121 |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1893 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccat 1951 Query: 122 cttagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1952 cttagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatg 2011 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgct 239 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 2012 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgct 2071 Query: 240 aggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298 ||||||||| | || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 2072 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 2131 Query: 299 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2132 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 2191 Query: 359 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 2251 Query: 419 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 2252 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 2308 Query: 479 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 2309 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 2366 Query: 539 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 598 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2367 cataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtc 2420 Query: 599 ttaatagggcgattgtcactgcttatggaccc 630 || ||||||| ||||||||||||||||||||| Sbjct: 2421 ttcatagggcaattgtcactgcttatggaccc 2452
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 870 bits (439), Expect = 0.0 Identities = 587/631 (93%), Gaps = 14/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct: 562 gacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaa 621 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 622 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 680 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 740 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 741 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 800 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||| | || |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 801 ggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcact 860 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 920 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaa 419 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 921 ccaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaa 980 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 981 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 1037 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 gcagtgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactc 1094 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1095 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 1148 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 1149 tcatagggcaattgtcactgcttatggaccc 1179
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 868 bits (438), Expect = 0.0 Identities = 587/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 142813 gacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaa 142754 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 142753 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 142695 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142694 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 142635 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 142634 ggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgcta 142575 Query: 241 ggcgaagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 142574 ggcgaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcac 142515 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142514 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 142455 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142454 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 142395 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 142394 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaa 142338 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 142337 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 142280 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 142279 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 142226 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 142225 tcatagggcaattgtcactgcttatggaccc 142195 Score = 868 bits (438), Expect = 0.0 Identities = 587/631 (93%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 110515 gacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaa 110574 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110575 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 110633 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110634 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 110693 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 110694 ggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgcta 110753 Query: 241 ggcgaagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 110754 ggcgaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcac 110813 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110814 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110873 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110874 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110933 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 110934 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaa 110990 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110991 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 111048 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111049 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 111102 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 111103 tcatagggcaattgtcactgcttatggaccc 111133
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 858 bits (433), Expect = 0.0 Identities = 584/630 (92%), Gaps = 12/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 4297 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 4356 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4357 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 4415 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4416 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4475 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 4476 ggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgcta 4535 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| | || || ||||||||||||| |||||||||||||||||||||||||| Sbjct: 4536 ggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 4595 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4596 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 4655 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4656 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 4715 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 4716 ggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 4772 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 4773 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 4830 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 4831 taggcagtggc-ttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtctt 4884 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 4885 catagggctattgtcactgcttatggaccc 4914
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 858 bits (433), Expect = 0.0 Identities = 584/630 (92%), Gaps = 12/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 23628 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 23569 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 23568 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 23510 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23509 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 23450 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 23449 ggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgcta 23390 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| | || || ||||||||||||| |||||||||||||||||||||||||| Sbjct: 23389 ggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 23330 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23329 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 23270 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23269 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 23210 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 23209 ggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 23153 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 23152 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 23095 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 23094 taggcagtggc-ttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtctt 23041 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 23040 catagggctattgtcactgcttatggaccc 23011
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 858 bits (433), Expect = 0.0 Identities = 585/630 (92%), Gaps = 13/630 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 4566 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 4625 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4626 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 4684 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4744 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4745 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 4804 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || || ||||||||||||| |||||||||||||||||||||||||| Sbjct: 4805 ggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 4864 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 4865 agcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaagga 4924 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4925 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 4984 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 4985 ggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa- 5040 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 5098 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 5099 taggcagtggc-ttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtctt 5152 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 5153 catagggctattgtcactgcttatggaccc 5182
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 858 bits (433), Expect = 0.0 Identities = 585/630 (92%), Gaps = 13/630 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 4566 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 4625 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4626 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 4684 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4744 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4745 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 4804 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| || || || ||||||||||||| |||||||||||||||||||||||||| Sbjct: 4805 ggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 4864 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 4865 agcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaagga 4924 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4925 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 4984 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 4985 ggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa- 5040 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 5098 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 5099 taggcagtggc-ttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtctt 5152 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 5153 catagggctattgtcactgcttatggaccc 5182
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 856 bits (432), Expect = 0.0 Identities = 583/630 (92%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| || Sbjct: 67 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaatgggttaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 127 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 185 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 245 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 246 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgcta 305 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct: 306 ggcgaagcggttgagtcccgcaccccagatggtgagagtccagtagccgaaagcatcact 365 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 agcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 425 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 485 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 486 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 542 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 543 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 602 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 |||| |||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 603 taggtagtggc-ctggttaag-----gggacccaccggagccgtagcgaaagcgagtctt 656 Query: 601 aatagggcgattgtcactgcttatggaccc 630 | |||| ||||||||| ||||||||||| Sbjct: 657 cctggggcaattgtcactacttatggaccc 686
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 854 bits (431), Expect = 0.0 Identities = 585/632 (92%), Gaps = 12/632 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 86328 gacgaaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaa 86387 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 || ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 86388 cccttttaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 86446 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 86447 tcttagtagccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatg 86506 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgc 238 ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| Sbjct: 86507 ggagcagcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgc 86566 Query: 239 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298 |||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||| Sbjct: 86567 taggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatca 86626 Query: 299 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358 | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86627 ttggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 86686 Query: 359 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86687 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 86746 Query: 419 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478 ||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 86747 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 86803 Query: 479 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86804 agcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 86863 Query: 539 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 598 |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 86864 tataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgagagcgagtc 86917 Query: 599 ttaatagggcgattgtcactgcttatggaccc 630 || || |||| ||||||||||||||||||||| Sbjct: 86918 ttcatggggcaattgtcactgcttatggaccc 86949
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 854 bits (431), Expect = 0.0 Identities = 585/632 (92%), Gaps = 12/632 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 88414 gacgaaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggttaa 88473 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 88474 cctttttcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaaca 88532 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88533 tcttagtagccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 88592 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgc 238 |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| Sbjct: 88593 ggagcagcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgc 88652 Query: 239 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298 |||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||| Sbjct: 88653 taggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatca 88712 Query: 299 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358 | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88713 ttggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 88772 Query: 359 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88773 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 88832 Query: 419 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478 ||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 88833 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 88889 Query: 479 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88890 agcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 88949 Query: 539 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 598 |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 88950 tataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgagagcgagtc 89003 Query: 599 ttaatagggcgattgtcactgcttatggaccc 630 || || |||| ||||||||||||||||||||| Sbjct: 89004 ttcatggggcaattgtcactgcttatggaccc 89035
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 852 bits (430), Expect = 0.0 Identities = 583/630 (92%), Gaps = 13/630 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||| | || |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 313 ggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcact 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||| |||| Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaag 549 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| || || |||||| ||||||||||||||| ||||||||||||||||| Sbjct: 550 cagtgggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactca 606 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 || |||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 607 tacgcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 660 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 661 catagggcaattgtcactgcttatggaccc 690
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 850 bits (429), Expect = 0.0 Identities = 588/632 (93%), Gaps = 18/632 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 166 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 225 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 226 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 284 Query: 121 tcttagt-agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 tcttagtgagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 344 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 345 gggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgct 403 Query: 240 aggcgaag-cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298 |||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 404 aggcgaagacgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 463 Query: 299 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 464 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaag 523 Query: 359 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 583 Query: 419 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478 | ||||||||||| ||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 584 agggtgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagctccca 639 Query: 479 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||| | | |||||||||||||||||||||||||||||||||||||| Sbjct: 640 agcagtgggaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggcgact 695 Query: 539 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 598 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 696 cataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtc 749 Query: 599 ttaatagggcgattgtcactgcttatggaccc 630 || ||||||| ||||||||||||||||||||| Sbjct: 750 ttcatagggcaattgtcactgcttatggaccc 781
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 829 bits (418), Expect = 0.0 Identities = 582/631 (92%), Gaps = 13/631 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 52620 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 52561 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 52560 ccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaaca 52502 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 52501 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 52442 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 52441 ggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgcta 52382 Query: 241 ggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 52381 ggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcat 52322 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52321 tagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaagg 52262 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 52261 accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaa 52202 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||||| Sbjct: 52201 gggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaa 52145 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 52144 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 52087 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| | Sbjct: 52086 ataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagtat 52033 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 52032 tcatagggcaattgtcactgcttatggaccc 52002 Score = 829 bits (418), Expect = 0.0 Identities = 582/631 (92%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 37208 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 37267 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 37268 ccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaaca 37326 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 37327 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 37386 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 37387 ggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgcta 37446 Query: 241 ggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 37447 ggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcat 37506 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 37507 tagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaagg 37566 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 37567 accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaa 37626 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||||| Sbjct: 37627 gggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaa 37683 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 37684 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 37741 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| | Sbjct: 37742 ataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagtat 37795 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 37796 tcatagggcaattgtcactgcttatggaccc 37826
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 23 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 82 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 83 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 143 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 203 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 263 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 322 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 323 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 383 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 443 tagtga 448 |||||| Sbjct: 421 tagtga 426
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 829 bits (418), Expect = 0.0 Identities = 582/631 (92%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 4136 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 4195 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 4196 ccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaaca 4254 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4255 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 4314 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 4315 ggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgcta 4374 Query: 241 ggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 4375 ggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcat 4434 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4435 tagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaagg 4494 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 4495 accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaa 4554 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||||| Sbjct: 4555 gggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaa 4611 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 4612 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 4669 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| | Sbjct: 4670 ataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagtat 4723 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 4724 tcatagggcaattgtcactgcttatggaccc 4754
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 827 bits (417), Expect = 0.0 Identities = 586/634 (92%), Gaps = 15/634 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 59 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 131805 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 131746 Query: 60 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 119 |||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||| Sbjct: 131745 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaac 131687 Query: 120 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131686 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 131627 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct: 131626 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 131567 Query: 240 aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297 ||||||||| | ||| ||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 131566 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 131507 Query: 298 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131506 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 131447 Query: 358 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131446 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 131387 Query: 418 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477 || ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 131386 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 131330 Query: 478 aagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 536 ||||||||||||| || | || |||||||||||||||||||||||||||||||||||| Sbjct: 131329 aagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcga 131271 Query: 537 ctcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgag 596 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 131270 ctcataggcagtggc-ttggttaag-----ggaaaccaccggagccgtagcgaaagcgag 131217 Query: 597 tcttaatagggcgattgtcactgcttatggaccc 630 |||| | ||||| ||||||||||||||||||||| Sbjct: 131216 tcttcacagggcaattgtcactgcttatggaccc 131183 Score = 827 bits (417), Expect = 0.0 Identities = 586/634 (92%), Gaps = 15/634 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 59 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 103589 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 103648 Query: 60 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 119 |||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||| Sbjct: 103649 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaac 103707 Query: 120 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103708 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 103767 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct: 103768 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 103827 Query: 240 aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297 ||||||||| | ||| ||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 103828 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 103887 Query: 298 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103888 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 103947 Query: 358 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 103948 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 104007 Query: 418 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477 || ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 104008 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 104064 Query: 478 aagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 536 ||||||||||||| || | || |||||||||||||||||||||||||||||||||||| Sbjct: 104065 aagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcga 104123 Query: 537 ctcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgag 596 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 104124 ctcataggcagtggc-ttggttaag-----ggaaaccaccggagccgtagcgaaagcgag 104177 Query: 597 tcttaatagggcgattgtcactgcttatggaccc 630 |||| | ||||| ||||||||||||||||||||| Sbjct: 104178 tcttcacagggcaattgtcactgcttatggaccc 104211
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 811 bits (409), Expect = 0.0 Identities = 461/478 (96%), Gaps = 14/478 (2%) Strand = Plus / Minus Query: 158 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 218 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 338 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 572 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 75068 Query: 573 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 75067 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 75010 Score = 313 bits (158), Expect = 4e-82 Identities = 161/162 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75646 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 75587 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75586 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 75527 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75526 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 89 gcaggcaagagacaacctggcgaactgaaacatcttagta 128 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 811 bits (409), Expect = 0.0 Identities = 461/478 (96%), Gaps = 14/478 (2%) Strand = Plus / Plus Query: 158 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 218 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 338 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 572 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 382470 Query: 573 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 382471 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 382528 Score = 313 bits (158), Expect = 4e-82 Identities = 161/162 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381892 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 381951 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381952 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 382011 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382012 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 89 gcaggcaagagacaacctggcgaactgaaacatcttagta 128 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 89 gcaggcaagagacaacctggcgaactgaaacatcttagta 128 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 811 bits (409), Expect = 0.0 Identities = 461/478 (96%), Gaps = 14/478 (2%) Strand = Plus / Minus Query: 158 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 218 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 338 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 572 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 113159 Query: 573 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 113158 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 113101 Score = 313 bits (158), Expect = 4e-82 Identities = 161/162 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113737 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 113678 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113677 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 113618 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 113617 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 89 gcaggcaagagacaacctggcgaactgaaacatcttagta 128 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 811 bits (409), Expect = 0.0 Identities = 461/478 (96%), Gaps = 14/478 (2%) Strand = Plus / Minus Query: 158 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 218 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 338 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 572 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 367841 Query: 573 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 367840 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 367783 Score = 811 bits (409), Expect = 0.0 Identities = 461/478 (96%), Gaps = 14/478 (2%) Strand = Plus / Minus Query: 158 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 218 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 338 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 572 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 184446 Query: 573 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 184445 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 184388 Score = 313 bits (158), Expect = 4e-82 Identities = 161/162 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368419 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 368360 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368359 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 368300 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 368299 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 313 bits (158), Expect = 4e-82 Identities = 161/162 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185024 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 184965 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184964 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 184905 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 184904 tcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 89 gcaggcaagagacaacctggcgaactgaaacatcttagta 128 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 807 bits (407), Expect = 0.0 Identities = 581/636 (91%), Gaps = 16/636 (2%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 128380 gacgaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaa 128321 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 128320 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 128262 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || Sbjct: 128261 tcttagtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtg 128202 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtg 234 |||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 128201 ggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtg 128142 Query: 235 ctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagc 294 |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||| Sbjct: 128141 ctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagc 128082 Query: 295 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 354 |||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 128081 atcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcag 128022 Query: 355 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 414 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 128021 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtga 127962 Query: 415 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 474 ||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| Sbjct: 127961 gggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagct 127905 Query: 475 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 534 |||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||| Sbjct: 127904 cccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggc 127845 Query: 535 gactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcg 594 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 127844 gactcataggcagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcg 127791 Query: 595 agtcttaatagggcgattgtcactgcttatggaccc 630 |||||| |||||| |||||||||||| |||||||| Sbjct: 127790 agtcttcctagggcaattgtcactgctcatggaccc 127755 Score = 807 bits (407), Expect = 0.0 Identities = 581/636 (91%), Gaps = 16/636 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 95067 gacgaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaa 95126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 95127 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 95185 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || Sbjct: 95186 tcttagtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtg 95245 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtg 234 |||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 95246 ggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtg 95305 Query: 235 ctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagc 294 |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||| Sbjct: 95306 ctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagc 95365 Query: 295 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 354 |||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 95366 atcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcag 95425 Query: 355 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 414 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95426 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtga 95485 Query: 415 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 474 ||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| Sbjct: 95486 gggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagct 95542 Query: 475 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 534 |||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||| Sbjct: 95543 cccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggc 95602 Query: 535 gactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcg 594 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 95603 gactcataggcagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcg 95656 Query: 595 agtcttaatagggcgattgtcactgcttatggaccc 630 |||||| |||||| |||||||||||| |||||||| Sbjct: 95657 agtcttcctagggcaattgtcactgctcatggaccc 95692
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 793 bits (400), Expect = 0.0 Identities = 576/630 (91%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || Sbjct: 116143 gacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaa 116084 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 116083 cctttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaaca 116025 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 116024 tcttagtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatg 115965 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||| ||||||| |||| | | ||| |||||| ||||| Sbjct: 115964 ggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgcta 115906 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | ||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 115905 ggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcact 115846 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115845 agcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 115786 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115785 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 115726 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 115725 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 115669 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 115668 cagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 115609 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 115608 taggcagtggc-ctggttaag-----ggagcccaccggagccgtagcgaaagcgagtctt 115555 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 115554 cttagggcaattgtcactgcttatggaccc 115525 Score = 793 bits (400), Expect = 0.0 Identities = 576/630 (91%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || Sbjct: 85977 gacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaa 86036 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 86037 cctttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaaca 86095 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 86096 tcttagtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatg 86155 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||| ||||||| |||| | | ||| |||||| ||||| Sbjct: 86156 ggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgcta 86214 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | ||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 86215 ggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcact 86274 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86275 agcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 86334 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86335 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 86394 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 86395 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 86451 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 86452 cagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 86511 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 86512 taggcagtggc-ctggttaag-----ggagcccaccggagccgtagcgaaagcgagtctt 86565 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 86566 cttagggcaattgtcactgcttatggaccc 86595
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 793 bits (400), Expect = 0.0 Identities = 469/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46318 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 46377 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 46378 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 46436 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46437 tcttactagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 46496 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46497 ggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 46556 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 46557 ggcgaagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcatcact 46616 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46617 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 46676 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46677 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 46736 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||| Sbjct: 46737 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaag 46793 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 46794 cagtgggagg 46803 Score = 186 bits (94), Expect = 6e-44 Identities = 122/130 (93%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 46876 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 46877 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 46931 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 46932 ttatggaccc 46941
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 793 bits (400), Expect = 0.0 Identities = 469/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130469 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 130410 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130409 cctttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 130351 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130350 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 130291 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 130290 ggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgcta 130231 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 130230 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 130171 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130170 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 130111 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130110 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 130051 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 130050 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 129994 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 129993 cagtgggagg 129984 Score = 793 bits (400), Expect = 0.0 Identities = 469/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101987 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 102046 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 102047 cctttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 102105 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102106 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 102165 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 102166 ggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgcta 102225 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 102226 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 102285 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102286 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 102345 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102346 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 102405 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 102406 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 102462 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 102463 cagtgggagg 102472 Score = 170 bits (86), Expect = 4e-39 Identities = 120/130 (92%), Gaps = 6/130 (4%) Strand = Plus / Minus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggctt-ggttaa 129911 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 ||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 129910 gggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 129856 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 129855 ttatggaccc 129846 Score = 170 bits (86), Expect = 4e-39 Identities = 120/130 (92%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggctt-ggttaa 102545 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 ||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102546 gggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102600 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 102601 ttatggaccc 102610
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 789 bits (398), Expect = 0.0 Identities = 583/631 (92%), Gaps = 24/631 (3%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 667 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtca- 609 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| |||| |||||||||||||| |||||||||||||| || |||| ||| ||| Sbjct: 608 -ctt---gactg-ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-aca 561 Query: 121 tcttagtagccagaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaat 179 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 560 tcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaat 501 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 500 gggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgct 441 Query: 240 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 440 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcac 381 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 321 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 261 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 260 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 204 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 203 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 145 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 91 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||||| ||||||||||||||||||||| Sbjct: 90 tcatagggcaattgtcactgcttatggaccc 60
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 785 bits (396), Expect = 0.0 Identities = 574/630 (91%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| || Sbjct: 67 gacgaaatgcttcggggagctgaaaataagcatggatccggagattcccgaataggttaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 127 ccttttgaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaaca 185 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 186 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 245 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| ||||||||||||||||||||||||||||| |||||| | |||||||| |||| Sbjct: 246 ggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgcta 305 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||| | | ||||| ||||||| | |||||||||||||||||||||||| Sbjct: 306 ggcgaagcagttgaatcctgcaccatagatggtgagagtccagtagccgaaagcatcact 365 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 agtttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 425 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 485 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 486 ggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaag 542 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 543 cagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 602 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 |||| |||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 603 taggtagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 656 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||| ||||||||||| Sbjct: 657 cctagggcaattgtcactacttatggaccc 686
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 779 bits (393), Expect = 0.0 Identities = 575/631 (91%), Gaps = 11/631 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 2110 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaa 2169 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2170 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 2228 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2229 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 2288 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 2289 ggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgcta 2348 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | ||||||||||||| | |||||||||||||||||||| || Sbjct: 2349 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataaca 2408 Query: 301 a-gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2409 acactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 2468 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2469 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 2528 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 2529 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 2585 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2586 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 2645 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2646 ataggtagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 2699 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | |||||| ||||||||| ||||||||||| Sbjct: 2700 tcctagggcaattgtcactacttatggaccc 2730
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 779 bits (393), Expect = 0.0 Identities = 575/631 (91%), Gaps = 11/631 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 118083 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaa 118024 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 118023 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 117965 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 117964 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 117905 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 117904 ggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgcta 117845 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | ||||||||||||| | |||||||||||||||||||| || Sbjct: 117844 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataaca 117785 Query: 301 a-gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117784 acactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 117725 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 117724 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 117665 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 117664 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 117608 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117607 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 117548 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117547 ataggtagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 117494 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | |||||| ||||||||| ||||||||||| Sbjct: 117493 tcctagggcaattgtcactacttatggaccc 117463 Score = 779 bits (393), Expect = 0.0 Identities = 575/631 (91%), Gaps = 11/631 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 90019 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaa 90078 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 90079 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 90137 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 90138 tcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 90197 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 90198 ggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgcta 90257 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | ||||||||||||| | |||||||||||||||||||| || Sbjct: 90258 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataaca 90317 Query: 301 a-gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90318 acactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 90377 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 90378 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 90437 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 90438 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 90494 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 90495 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 90554 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90555 ataggtagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 90608 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | |||||| ||||||||| ||||||||||| Sbjct: 90609 tcctagggcaattgtcactacttatggaccc 90639
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 777 bits (392), Expect = 0.0 Identities = 467/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||| ||| |||||||| | |||||||||| Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaag 549 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 550 cagtgggagg 559 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 567 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 626 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 618 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 677 Query: 627 accc 630 |||| Sbjct: 678 accc 681
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 777 bits (392), Expect = 0.0 Identities = 467/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| || ||||||||||||| |||||||| | |||||||||| Sbjct: 493 ggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaag 549 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 550 cagtgggagg 559 Score = 155 bits (78), Expect = 2e-34 Identities = 118/130 (90%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||| ||||||||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggctt-ggttaa 639 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 gggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 695 ttatggaccc 704
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 771 bits (389), Expect = 0.0 Identities = 574/631 (90%), Gaps = 11/631 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| || Sbjct: 146493 gacgaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaa 146434 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||| | |||||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 146433 ccttttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaaca 146375 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146374 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 146315 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 146314 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgcta 146255 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | | ||||||||||| | |||||||||||||||||||||||| Sbjct: 146254 ggcgaagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcact 146195 Query: 301 agc-ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 146194 ggctttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaagg 146135 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146134 accaccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaa 146075 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 146074 aggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaa 146018 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 146017 gcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgactt 145958 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 145957 ataggcagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 145904 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | |||||| ||||||||||||||||||||| Sbjct: 145903 tcctagggcaattgtcactgcttatggaccc 145873 Score = 771 bits (389), Expect = 0.0 Identities = 574/631 (90%), Gaps = 11/631 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| || Sbjct: 111969 gacgaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaa 112028 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||| | |||||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 112029 ccttttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaaca 112087 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112088 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 112147 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 112148 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgcta 112207 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | | ||||||||||| | |||||||||||||||||||||||| Sbjct: 112208 ggcgaagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcact 112267 Query: 301 agc-ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112268 ggctttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaagg 112327 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112328 accaccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaa 112387 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 112388 aggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaa 112444 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 112445 gcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgactt 112504 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112505 ataggcagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 112558 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | |||||| ||||||||||||||||||||| Sbjct: 112559 tcctagggcaattgtcactgcttatggaccc 112589
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 771 bits (389), Expect = 0.0 Identities = 573/630 (90%), Gaps = 7/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || Sbjct: 50 gacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaa 109 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 110 ccttttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaaca 168 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| | Sbjct: 169 tcttagtagccggaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacg 228 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||| |||| | | |||| |||| ||||| Sbjct: 229 ggagcagcctaaaccgtgaaaacggggttgtgggggagctaaagaagcattgtattgcta 288 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||| | ||||||||||||| | ||||||||| |||||||||| || Sbjct: 289 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtaaccgaaagcattaca 348 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 349 agcttgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaagga 408 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 468 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||| Sbjct: 469 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 525 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 526 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 585 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| Sbjct: 586 taggcagtggc-ctggttaagggaaag--aaccaccggagccatagcgaaagcgagtctt 642 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||| ||||||||||||||||||||| Sbjct: 643 cccagggcaattgtcactgcttatggaccc 672
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 769 bits (388), Expect = 0.0 Identities = 572/630 (90%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 3956 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 4015 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 4016 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 4074 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4075 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4134 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4135 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 4194 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 || ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| Sbjct: 4195 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 4254 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4255 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 4314 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4315 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 4374 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||| Sbjct: 4375 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 4431 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4432 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 4491 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 4492 taggcagtggc-ctggttaag-----ggaattcaccggagccgtagcgaaagcgagtctt 4545 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 4546 cctagggcaattgtcactgcttatggaccc 4575
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 769 bits (388), Expect = 0.0 Identities = 466/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| || Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccct 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| || ||||||||||||| |||||||| | |||||||||| Sbjct: 493 ggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaag 549 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 550 cagtgggagg 559 Score = 121 bits (61), Expect = 3e-24 Identities = 115/130 (88%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggctt-ggttaa 638 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 || ||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 639 cgg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 695 ttatggaccc 704
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 769 bits (388), Expect = 0.0 Identities = 466/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| || Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccct 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||| ||| |||||||| | |||||||||| Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaag 549 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 550 cagtgggagg 559 Score = 123 bits (62), Expect = 7e-25 Identities = 115/130 (88%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||| |||||||||||| || ||||||||| ||||||||||| |||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggctt-ggttaa 638 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 639 gggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 693 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 694 ttatggaccc 703
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 769 bits (388), Expect = 0.0 Identities = 466/490 (95%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggggttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| || Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccct 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 549 Query: 481 cagtgggagg 490 |||||||||| Sbjct: 550 cagtgggagg 559 Score = 133 bits (67), Expect = 8e-28 Identities = 118/131 (90%), Gaps = 8/131 (6%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggctt-ggttaa 638 Query: 561 gggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactg 619 |||||| |||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 639 gggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactg 693 Query: 620 cttatggaccc 630 ||||||||||| Sbjct: 694 cttatggaccc 704
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 769 bits (388), Expect = 0.0 Identities = 572/630 (90%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 66 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 125 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 126 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 184 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 244 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 245 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 304 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 || ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| Sbjct: 305 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 364 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 424 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 484 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||| Sbjct: 485 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 541 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 542 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 601 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 602 taggcagtggc-ctggttaag-----ggaattcaccggagccgtagcgaaagcgagtctt 655 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 656 cctagggcaattgtcactgcttatggaccc 685
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 769 bits (388), Expect = 0.0 Identities = 572/630 (90%), Gaps = 10/630 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 151179 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 151120 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 151119 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 151061 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 151060 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 151001 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 151000 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 150941 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 || ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| Sbjct: 150940 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 150881 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150880 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 150821 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150820 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 150761 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||| Sbjct: 150760 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 150704 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150703 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 150644 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 150643 taggcagtggc-ctggttaag-----ggaattcaccggagccgtagcgaaagcgagtctt 150590 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 150589 cctagggcaattgtcactgcttatggaccc 150560 Score = 769 bits (388), Expect = 0.0 Identities = 572/630 (90%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 117487 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 117546 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 117547 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 117605 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117606 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 117665 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 117666 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 117725 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 || ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| Sbjct: 117726 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 117785 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117786 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 117845 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117846 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 117905 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||| Sbjct: 117906 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 117962 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 117963 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 118022 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 118023 taggcagtggc-ctggttaag-----ggaattcaccggagccgtagcgaaagcgagtctt 118076 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 118077 cctagggcaattgtcactgcttatggaccc 118106
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 769 bits (388), Expect = 0.0 Identities = 572/630 (90%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 66 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 125 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 126 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 184 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 244 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 245 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 304 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 || ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| Sbjct: 305 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 364 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 424 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 484 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||| Sbjct: 485 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 541 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 542 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 601 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 602 taggcagtggc-ctggttaag-----ggaattcaccggagccgtagcgaaagcgagtctt 655 Query: 601 aatagggcgattgtcactgcttatggaccc 630 |||||| ||||||||||||||||||||| Sbjct: 656 cctagggcaattgtcactgcttatggaccc 685
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 767 bits (387), Expect = 0.0 Identities = 575/634 (90%), Gaps = 14/634 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||| || Sbjct: 67 gacgaaatgcttcggggagctgaaaataagtatggatccggagattcccgaataggttaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||||||||||| |||||||| ||| || |||||||||||||| |||||||||||||| Sbjct: 127 ccttttaaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaaca 185 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 186 tcttagtagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatg 245 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgct 236 ||||| |||||||||||||||||||||||||||| |||| |||||| || ||| ||| Sbjct: 246 ggagcggcctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcgct 305 Query: 237 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 296 |||||||||||| ||||||| | |||||| |||||| | ||||||||| |||||||||| Sbjct: 306 gctaggcgaagcagttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcat 365 Query: 297 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 356 || | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aacaatcttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 425 Query: 357 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 485 Query: 417 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 476 ||||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||| Sbjct: 486 gaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcc 542 Query: 477 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 536 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 543 caagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcga 602 Query: 537 ctcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgag 596 || |||||||||||| |||||||| ||||||||||||||||||||||||||| || Sbjct: 603 cttataggcagtggc-ctggttaag-----ggaacccaccggagccgtagcgaaagcaag 656 Query: 597 tcttaatagggcgattgtcactgcttatggaccc 630 |||| | |||| ||||||||||||||||||||| Sbjct: 657 tcttcctggggcaattgtcactgcttatggaccc 690
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 759 bits (383), Expect = 0.0 Identities = 486/516 (94%), Gaps = 7/516 (1%) Strand = Plus / Minus Query: 39 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 98 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 99 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 159 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 219 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 277 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 338 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 397 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 398 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 457 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 458 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 517 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 518 ttgaagaatgagccggcgactcataggcagtggctt 553 |||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggctt 3
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 755 bits (381), Expect = 0.0 Identities = 495/529 (93%), Gaps = 7/529 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 115 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 174 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 175 cctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaaca 233 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 tcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 293 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 294 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 353 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 354 ggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcact 413 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 473 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 533 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 534 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 590 Query: 481 cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 528 ||| |||||| | || | |||||||||||||||||||||||||||| Sbjct: 591 cagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 745 bits (376), Expect = 0.0 Identities = 457/481 (95%), Gaps = 6/481 (1%) Strand = Plus / Plus Query: 74 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 133 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 134 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 194 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 252 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 253 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 312 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 313 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 373 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 432 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 433 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 492 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 553 t 553 | Sbjct: 492 t 492
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 718 bits (362), Expect = 0.0 Identities = 465/496 (93%), Gaps = 5/496 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaa 133 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||| | || |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 313 ggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcact 372 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 492 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 ||||||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| |||| Sbjct: 493 ggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaag 548 Query: 481 cagtgggaggggaaag 496 |||||||||| ||||| Sbjct: 549 cagtgggaggagaaag 564 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 567 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 626 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 627 accc 630 |||| Sbjct: 662 accc 665
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 32 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 91 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 92 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 152 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 212 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 272 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 331 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 332 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 392 ccgata 397 |||||| Sbjct: 361 ccgata 366
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 702 bits (354), Expect = 0.0 Identities = 567/631 (89%), Gaps = 14/631 (2%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||| |||||||| ||| || || Sbjct: 66 gacgaaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatggggtaa 125 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| | ||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 126 cctttcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaaca 184 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 185 tcttagtagccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatg 244 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 245 ggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 304 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || | || |||||||||||||| |||||||||||| | |||||||||| Sbjct: 305 ggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcac 364 Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359 || || |||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 365 tacgttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaagg 424 Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419 |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 425 accaccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaa 484 Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479 ||||||||||| ||||| |||| ||||||||||||| |||||||| | |||| |||| Sbjct: 485 gggtgaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagctaccaa 540 Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 598 Query: 540 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 599 |||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| | Sbjct: 599 ataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagtat 652 Query: 600 taatagggcgattgtcactgcttatggaccc 630 | ||||| | ||||||||||||||||||||| Sbjct: 653 tcataggactattgtcactgcttatggaccc 683
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 692 bits (349), Expect = 0.0 Identities = 417/436 (95%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 63 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 122 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 181 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 241 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 242 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 301 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 ||||||||||| || | | |||||||||||||| | |||||||||||||||||||||||| Sbjct: 302 ggcgaagcggtggaatactgcaccctagatggcgatagtccagtagccgaaagcatcact 361 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 421 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 422 ccaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgagggaag 479 Query: 421 ggtgaaaagaaccccc 436 |||| ||||||||||| Sbjct: 480 ggtg-aaagaaccccc 494 Score = 97.6 bits (49), Expect = 4e-17 Identities = 80/90 (88%), Gaps = 4/90 (4%) Strand = Plus / Plus Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||||||||||| | | |||||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 601 aatagggcgattgtcactgcttatggaccc 630 ||||||| ||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggaccc 698
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 686 bits (346), Expect = 0.0 Identities = 407/426 (95%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 43 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 102 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 cctttcaaactgc-tgccgaatccatgggcaggcaagagacaacctggcgaactgaaaca 161 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 tcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 221 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 222 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 281 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||| || ||||||||||||||| |||||||||||||||||||||||| Sbjct: 282 ggcgaagcggccgaacaccgcaccctagatggtgggagtccagtagccgaaagcatcact 341 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 401 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 461 Query: 421 ggtgaa 426 |||||| Sbjct: 462 ggtgaa 467
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 680 bits (343), Expect = 0.0 Identities = 356/359 (99%), Gaps = 1/359 (0%) Strand = Plus / Plus Query: 272 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 331 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 332 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 392 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 452 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 512 tgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaac 571 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaac 299 Query: 572 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 300 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 358
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 644 bits (325), Expect = 0.0 Identities = 337/341 (98%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123404 gacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaa 123345 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123344 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 123285 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123284 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 123225 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123224 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 123165 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123164 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 123105 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatc 341 |||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123104 agcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 545 bits (275), Expect = e-152 Identities = 294/299 (98%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 333 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtg-gctttggttaagggaacggaac 571 ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 572 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 122522
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 644 bits (325), Expect = 0.0 Identities = 337/341 (98%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825945 gacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaa 12825886 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825885 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 12825826 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825825 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 12825766 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825765 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 12825706 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825705 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 12825646 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatc 341 |||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825645 agcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 545 bits (275), Expect = e-152 Identities = 294/299 (98%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 333 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 393 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 453 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 513 gcctgttgaagaatgagccggcgactcataggcagtg-gctttggttaagggaacggaac 571 ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 572 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 12825063 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 278 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 581 bits (293), Expect = e-162 Identities = 306/309 (99%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 322 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 382 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 442 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 501 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaag 561 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaag 239 Query: 562 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 621 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 240 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 299 Query: 622 tatggaccc 630 ||||||||| Sbjct: 300 tatggaccc 308
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 59 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 118 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 119 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 179 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 239 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 299 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 359 gaccaccttgcaaggctaaatactcctgggtg 390 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 557 bits (281), Expect = e-155 Identities = 291/293 (99%), Gaps = 1/293 (0%) Strand = Plus / Plus Query: 338 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 398 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 458 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 518 ttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccg 577 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaacccaccg 239 Query: 578 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 240 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 292
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 511 bits (258), Expect = e-142 Identities = 536/624 (85%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||| || Sbjct: 143985 gacgaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaa 144044 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||| |||||||||||||||| || ||||| |||||||||||| |||||||||||||| Sbjct: 144045 ccttccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaaca 144104 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| | Sbjct: 144105 tcttagtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacg 144164 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| ||||||||||||||| ||||||||||||||||| || || | || | ||| Sbjct: 144165 ggaagagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttacta 144224 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||||| |||||| |||||| | ||||||||||||| ||| | || Sbjct: 144225 ggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagct 144284 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| | |||| |||| |||||||||||||||| |||||||||||||||||| |||| Sbjct: 144285 agctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgagga 144344 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||| Sbjct: 144345 ccaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaa 144404 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 144405 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaag 144461 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144462 cagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttg 144521 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 144522 taggcggtggc-ccggttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtctt 144578 Query: 601 aatagggcgattgtcactgcttat 624 | |||| |||||||| |||||| Sbjct: 144579 gctggggcaattgtcaccgcttat 144602 Score = 511 bits (258), Expect = e-142 Identities = 536/624 (85%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||| || Sbjct: 88866 gacgaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaa 88807 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||| |||||||||||||||| || ||||| |||||||||||| |||||||||||||| Sbjct: 88806 ccttccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaaca 88747 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| | Sbjct: 88746 tcttagtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacg 88687 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||| ||||||||||||||| ||||||||||||||||| || || | || | ||| Sbjct: 88686 ggaagagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttacta 88627 Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300 |||||||| ||||||||| |||||| |||||| | ||||||||||||| ||| | || Sbjct: 88626 ggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagct 88567 Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360 |||| | |||| |||| |||||||||||||||| |||||||||||||||||| |||| Sbjct: 88566 agctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgagga 88507 Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420 |||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||| Sbjct: 88506 ccaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaa 88447 Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480 |||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 88446 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaag 88390 Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540 |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88389 cagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttg 88330 Query: 541 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 600 ||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 88329 taggcggtggc-ccggttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtctt 88273 Query: 601 aatagggcgattgtcactgcttat 624 | |||| |||||||| |||||| Sbjct: 88272 gctggggcaattgtcaccgcttat 88249
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 486 bits (245), Expect = e-134 Identities = 335/360 (93%), Gaps = 5/360 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 59 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 2665 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 2724 Query: 60 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 119 |||||| |||||| ||||||||||| | |||||||||||||||| ||| |||||||||| Sbjct: 2725 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaac 2783 Query: 120 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2784 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 2843 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct: 2844 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 2903 Query: 240 aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297 ||||||||| | ||| ||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 2904 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 2963 Query: 298 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357 ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2964 act-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 486 bits (245), Expect = e-134 Identities = 335/360 (93%), Gaps = 5/360 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 59 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 920 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 979 Query: 60 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 119 |||||| |||||| ||||||||||| | |||||||||||||||| ||| |||||||||| Sbjct: 980 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaac 1038 Query: 120 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 1098 Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239 |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct: 1099 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 1158 Query: 240 aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297 ||||||||| | ||| ||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 1159 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 1218 Query: 298 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357 ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1219 act-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 482 bits (243), Expect = e-133 Identities = 388/433 (89%), Gaps = 10/433 (2%) Strand = Plus / Minus Query: 199 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 258 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 259 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 318 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 439 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 498 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 499 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 558 |||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggc-ttggtt 5929 Query: 559 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 618 ||| || |||||||||||||||||||| |||||||||| ||||||| ||||||||| Sbjct: 5928 aag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcact 5874 Query: 619 gc-ttatggaccc 630 || |||||||||| Sbjct: 5873 gctttatggaccc 5861 Score = 256 bits (129), Expect = 8e-65 Identities = 182/197 (92%), Gaps = 2/197 (1%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||| || | |||||||||||||||||||| ||||||| || Sbjct: 6509 gacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggttaa 6451 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| |||||| ||||||||||||| ||||| ||| | |||||||| ||||||||||| Sbjct: 6450 ccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaaaca 6392 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6391 tcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 6332 Query: 181 ggagcagcctaaaccgt 197 ||||||||||||||||| Sbjct: 6331 ggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 476 bits (240), Expect = e-131 Identities = 470/543 (86%), Gaps = 14/543 (2%) Strand = Plus / Minus Query: 92 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 151 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 152 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 211 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 212 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 267 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 327 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 328 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 387 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 388 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 447 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 448 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 507 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 508 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacg 567 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| | Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggc-ctggttaag-----g 138645 Query: 568 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 627 ||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 138644 gaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgga 138585 Query: 628 ccc 630 ||| Sbjct: 138584 ccc 138582 Score = 476 bits (240), Expect = e-131 Identities = 470/543 (86%), Gaps = 14/543 (2%) Strand = Plus / Plus Query: 92 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 151 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 152 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 211 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 212 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 267 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 327 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 328 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 387 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 388 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 447 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 448 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 507 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 508 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacg 567 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| | Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggc-ctggttaag-----g 83232 Query: 568 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 627 ||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 83233 gaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgga 83292 Query: 628 ccc 630 ||| Sbjct: 83293 ccc 83295
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 448 bits (226), Expect = e-122 Identities = 229/230 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 183 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 230 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 448 bits (226), Expect = e-122 Identities = 229/230 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 183 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 230 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 438 bits (221), Expect = e-119 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct: 177097 gacgaaatgcttcggggagttgaaaatcagcatagatccggagattcccgaatagggcaa 177156 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| ||||||||||||| |||||||||||| |||| |||||||||||| | Sbjct: 177157 cctttcgaactgc-tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaaga 177215 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177216 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatg 177275 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 177276 ggagctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagcta 177335 Query: 241 ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299 |||||||| | || ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 177336 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 177395 Query: 300 tagcttatgctctgacc 316 ||||||| ||||||||| Sbjct: 177396 tagcttaggctctgacc 177412 Score = 186 bits (94), Expect = 6e-44 Identities = 122/130 (93%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 177463 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177464 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 177518 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 177519 ttatggaccc 177528 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 108 gcgaactgaaacatcttagtagc 130 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 108 gcgaactgaaacatcttagtagc 130 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 414 bits (209), Expect = e-112 Identities = 263/279 (94%), Gaps = 4/279 (1%) Strand = Plus / Plus Query: 275 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 334 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 335 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 395 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 454 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 455 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 514 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 515 ctgttgaagaatgagccggcgactcataggcagtggctt 553 ||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggctt 277
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 54 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 113 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 174 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 233 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 234 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 293 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 294 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 353 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 354 gcaaggaccaccttgcaag 372 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 131 bits (66), Expect = 3e-27 Identities = 115/130 (88%), Gaps = 6/130 (4%) Strand = Plus / Minus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggc-ttggttaa 3191 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 | |||||||||||||||| ||||||||||||||| ||| |||| ||| ||||||| Sbjct: 3190 g-----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgc 3136 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 3135 ttatggaccc 3126 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 381 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 440 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 441 ggtagtgaaatagaacgtgaaacc 464 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggag 43 ||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3736 gacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 151 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 210 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 211 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 269 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 270 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 329 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 330 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 389 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 390 gaccgata 397 |||||||| Sbjct: 241 gaccgata 248
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 361 bits (182), Expect = 2e-96 Identities = 527/629 (83%), Gaps = 21/629 (3%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 183 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 242 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 243 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 302 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 303 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 361 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 362 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 421 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 422 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 481 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 482 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 541 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 542 aggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 601 | | |||||| ||||||||| |||| ||||||||||| |||||||||| |||||| Sbjct: 595 aagtagtggc-ctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttc 648 Query: 602 atagggcgattgtcactgcttatggaccc 630 |||||| | ||||| ||||| ||||||| Sbjct: 649 atagggaaaatgtcattgcttgtggaccc 677
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 440 gggtagtgaaatagaacgtgaaaccgt 466 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 345 bits (174), Expect = 1e-91 Identities = 284/317 (89%), Gaps = 9/317 (2%) Strand = Plus / Plus Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-c 613 Query: 554 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 613 ||||||||| | ||| | ||||||||||||||||||||||||| |||||||| || Sbjct: 614 tggttaaggcga--gaagc---cggagccgtagcgaaagcgagtctttctagggcgaatg 668 Query: 614 tcactgcttatggaccc 630 ||||||||||||||||| Sbjct: 669 tcactgcttatggaccc 685 Score = 232 bits (117), Expect = 1e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 54 gacgaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaa 113 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || |||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 114 cctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaaca 173 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 174 tcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatg 233 Query: 181 ggagcagcctaaaccgt 197 ||| ||||||||||||| Sbjct: 234 ggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 345 bits (174), Expect = 1e-91 Identities = 284/317 (89%), Gaps = 9/317 (2%) Strand = Plus / Plus Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-c 626 Query: 554 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 613 ||||||||| | ||| | ||||||||||||||||||||||||| |||||||| || Sbjct: 627 tggttaaggcga--gaagc---cggagccgtagcgaaagcgagtctttctagggcgaatg 681 Query: 614 tcactgcttatggaccc 630 ||||||||||||||||| Sbjct: 682 tcactgcttatggaccc 698 Score = 232 bits (117), Expect = 1e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 67 gacgaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || |||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 127 cctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaaca 186 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 187 tcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatg 246 Query: 181 ggagcagcctaaaccgt 197 ||| ||||||||||||| Sbjct: 247 ggaacagcctaaaccgt 263
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 343 bits (173), Expect = 4e-91 Identities = 204/213 (95%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 79704 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 79645 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 79644 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 79586 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79585 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 79526 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgg 213 ||| ||||||||||||||||||||||||||||| Sbjct: 79525 ggaacagcctaaaccgtgaaaacggggttgtgg 79493
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 335 bits (169), Expect = 1e-88 Identities = 341/395 (86%), Gaps = 10/395 (2%) Strand = Plus / Plus Query: 236 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 296 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 356 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 416 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 476 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 536 actcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcga 595 ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 599 acttataggcagtggc-gtggttaag-----ggaattcaccggagccgtagcgaaagcga 652 Query: 596 gtcttaatagggcgattgtcactgcttatggaccc 630 ||| ||| ||||||||||||||||||||||||||| Sbjct: 653 gtc-taacagggcgattgtcactgcttatggaccc 686 Score = 236 bits (119), Expect = 7e-59 Identities = 194/219 (88%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||| Sbjct: 67 gacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||| Sbjct: 127 cctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaaca 186 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 187 tcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacg 246 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc 219 ||| |||||||||||| |||| ||||||||||||||||| Sbjct: 247 ggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 335 bits (169), Expect = 1e-88 Identities = 341/395 (86%), Gaps = 10/395 (2%) Strand = Plus / Minus Query: 236 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 296 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 356 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 416 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 476 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 536 actcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcga 595 ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggc-gtggttaag-----ggaattcaccggagccgtagcgaaagcga 124613 Query: 596 gtcttaatagggcgattgtcactgcttatggaccc 630 ||| ||| ||||||||||||||||||||||||||| Sbjct: 124612 gtc-taacagggcgattgtcactgcttatggaccc 124579 Score = 335 bits (169), Expect = 1e-88 Identities = 341/395 (86%), Gaps = 10/395 (2%) Strand = Plus / Plus Query: 236 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 296 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 356 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 416 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 476 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 536 actcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcga 595 ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggc-gtggttaag-----ggaattcaccggagccgtagcgaaagcga 95253 Query: 596 gtcttaatagggcgattgtcactgcttatggaccc 630 ||| ||| ||||||||||||||||||||||||||| Sbjct: 95254 gtc-taacagggcgattgtcactgcttatggaccc 95287 Score = 236 bits (119), Expect = 7e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||| Sbjct: 125198 gacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaa 125139 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||| Sbjct: 125138 cctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaaca 125079 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 125078 tcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacg 125019 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc 219 ||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125018 ggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 236 bits (119), Expect = 7e-59 Identities = 194/219 (88%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||| Sbjct: 94668 gacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaa 94727 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||| Sbjct: 94728 cctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaaca 94787 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 94788 tcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacg 94847 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagc 219 ||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94848 ggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 325 bits (164), Expect = 1e-85 Identities = 167/168 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75832 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 75891 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75892 ccttttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaaca 75951 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 168 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75952 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ggcgaactgaaacatcttag 126 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 319 bits (161), Expect = 6e-84 Identities = 174/177 (98%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 409 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 468 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 469 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 528 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 529 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 585 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgta 107875
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 315 bits (159), Expect = 1e-82 Identities = 299/341 (87%), Gaps = 11/341 (3%) Strand = Plus / Plus Query: 290 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 349 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 350 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 409 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 410 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 469 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 470 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 529 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 530 ccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcga 589 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| |||||| Sbjct: 608 ccggcgactcataagtagtggc-ctggttaagg----ggaa-ccaccggagccatagcga 661 Query: 590 aagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||| |||||| ||||||| | ||||| |||||||| |||| Sbjct: 662 aagcaagtcttcatagggcaaatgtcattgcttatgtaccc 702 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 89 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 148 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 149 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 208 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 209 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 268 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 269 a 269 | Sbjct: 325 a 325
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 307 bits (155), Expect = 2e-80 Identities = 217/237 (91%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 729 Score = 222 bits (112), Expect = 1e-54 Identities = 175/196 (89%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 171 gacgaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaa 230 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || |||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 231 cctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaaca 290 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 291 tcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatg 350 Query: 181 ggagcagcctaaaccg 196 ||| |||||||||||| Sbjct: 351 ggaacagcctaaaccg 366 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 747 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggaccc 802
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 295 bits (149), Expect = 9e-77 Identities = 263/297 (88%), Gaps = 8/297 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 554 |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggc-ta 613 Query: 555 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 611 |||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 614 ggttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 666 Score = 157 bits (79), Expect = 5e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| ||| Sbjct: 54 gacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaa 113 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || |||| | ||||||| || || | ||||||||||||| ||| ||||||| Sbjct: 114 cctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaaca 173 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 174 tcttagtagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaagg 233 Query: 181 ggagcagcctaaacc 195 ||| ||| ||||||| Sbjct: 234 ggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 295 bits (149), Expect = 9e-77 Identities = 263/297 (88%), Gaps = 8/297 (2%) Strand = Plus / Minus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 554 |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggc-ta 115049 Query: 555 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 611 |||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 115048 ggttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 114996 Score = 295 bits (149), Expect = 9e-77 Identities = 263/297 (88%), Gaps = 8/297 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 554 |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggc-ta 86939 Query: 555 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 611 |||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 86940 ggttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 86992 Score = 157 bits (79), Expect = 5e-35 Identities = 166/195 (85%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| ||| Sbjct: 115609 gacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaa 115550 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || |||| | ||||||| || || | ||||||||||||| ||| ||||||| Sbjct: 115549 cctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaaca 115490 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 115489 tcttagtagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaagg 115430 Query: 181 ggagcagcctaaacc 195 ||| ||| ||||||| Sbjct: 115429 ggaacagtctaaacc 115415 Score = 157 bits (79), Expect = 5e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| ||| Sbjct: 86379 gacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaa 86438 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || |||| | ||||||| || || | ||||||||||||| ||| ||||||| Sbjct: 86439 cctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaaca 86498 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 86499 tcttagtagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaagg 86558 Query: 181 ggagcagcctaaacc 195 ||| ||| ||||||| Sbjct: 86559 ggaacagtctaaacc 86573
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 327 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 387 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 447 gaaatagaacgtgaaaccgtgctgagctcc 476 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 327 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 387 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 447 gaaatagaacgtgaaaccgtgctgagctcc 476 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 327 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 387 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 447 gaaatagaacgtgaaaccgtgctgagctcc 476 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 469 tgagctcccaagcagtgggaggggaaagtgatc 501 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 583 gtagcgaaagcgagtcttaatagggcgattgtcactgctta 623 ||||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056636 gtagcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 327 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 387 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 447 gaaatagaacgtgaaaccgtgctgagctcc 476 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 469 tgagctcccaagcagtgggaggggaaagtgatc 501 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 583 gtagcgaaagcgagtcttaatagggcgattgtcactgctta 623 ||||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128333 gtagcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 287 bits (145), Expect = 2e-74 Identities = 317/371 (85%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 440 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 499 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 500 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 4665 Query: 560 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 619 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 620 cttatggaccc 630 ||||||||| Sbjct: 4725 tctatggaccc 4735 Score = 192 bits (97), Expect = 1e-45 Identities = 170/193 (88%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || || Sbjct: 4100 gacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaa 4159 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 || || |||||| ||||||||||| || | |||||| ||||||| ||||||||||| Sbjct: 4160 ccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaaca 4218 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 4219 tcttagtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatg 4278 Query: 181 ggagcagcctaaa 193 |||| |||||||| Sbjct: 4279 ggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 287 bits (145), Expect = 2e-74 Identities = 317/371 (85%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 440 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 499 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 500 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 632 Query: 560 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 619 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 620 cttatggaccc 630 ||||||||| Sbjct: 692 tctatggaccc 702 Score = 184 bits (93), Expect = 2e-43 Identities = 169/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || || Sbjct: 67 gacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 || || |||||| ||||||| ||| || | |||||| ||||||| ||||||||||| Sbjct: 127 ccccttgtactgcc-gctgaatacataggcggataagagagaacctggtgaactgaaaca 185 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 186 tcttagtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatg 245 Query: 181 ggagcagcctaaa 193 |||| |||||||| Sbjct: 246 ggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 287 bits (145), Expect = 2e-74 Identities = 317/371 (85%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 440 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 499 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 500 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 632 Query: 560 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 619 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 620 cttatggaccc 630 ||||||||| Sbjct: 692 tctatggaccc 702 Score = 192 bits (97), Expect = 1e-45 Identities = 170/193 (88%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || || Sbjct: 67 gacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 || || |||||| ||||||||||| || | |||||| ||||||| ||||||||||| Sbjct: 127 ccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaaca 185 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 186 tcttagtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatg 245 Query: 181 ggagcagcctaaa 193 |||| |||||||| Sbjct: 246 ggagaagcctaaa 258
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggc 571 Score = 168 bits (85), Expect = 1e-38 Identities = 143/161 (88%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 35 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 94 ||||||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | Sbjct: 56 gatccggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagac 114 Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 gagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195 ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 175 ttccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 262 bits (132), Expect = 1e-66 Identities = 257/294 (87%), Gaps = 11/294 (3%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 554 ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc-tt 603 Query: 555 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 608 |||||||| | | | |||||||| |||||||||||||||| |||||||| Sbjct: 604 ggttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggc 653 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 155 ttcccgtagtagcggcgagcgaa 177 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 260 bits (131), Expect = 5e-66 Identities = 222/248 (89%), Gaps = 7/248 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 554 | ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc-tt 642 Query: 555 ggttaagg 562 |||||||| Sbjct: 643 ggttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 194 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 248 bits (125), Expect = 2e-62 Identities = 214/243 (88%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 309 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 368 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 369 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 428 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 429 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 488 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 489 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 548 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 549 ggc 551 ||| Sbjct: 575 ggc 577 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 102 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 161 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 162 agtagcggcgagcgaaatgggagcagcctaaacc 195 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 243 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 302 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 303 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 362 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 363 accttgcaaggctaaatactcctgggtgaccga 395 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 96 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 155 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 156 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| ||| Sbjct: 54 gacgaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaa 113 Query: 61 cct 63 ||| Sbjct: 114 cct 116 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 577 ggagccgtagcgaaagcgagtcttaatagggcg 609 |||||| |||||||||||||||| ||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcg 682
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 96 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 155 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 156 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| ||| Sbjct: 1820 gacgaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaa 1879 Query: 61 cct 63 ||| Sbjct: 1880 cct 1882 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 577 ggagccgtagcgaaagcgagtcttaatagggcg 609 |||||| |||||||||||||||| ||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcg 2451
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 240 bits (121), Expect = 5e-60 Identities = 275/323 (85%), Gaps = 5/323 (1%) Strand = Plus / Plus Query: 308 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 367 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 368 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 427 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 428 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 487 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 488 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 547 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 548 tggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaataggg 607 |||| | ||||||||||| | ||| |||||| |||||||||| |||||| |||| Sbjct: 617 tggc-tgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcaggg 674 Query: 608 cgattgtcactgcttatggaccc 630 | |||||||||| ||||||||| Sbjct: 675 ctattgtcactgtctatggaccc 697 Score = 163 bits (82), Expect = 9e-37 Identities = 168/194 (86%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| |||||||||||| ||||| | | ||||||||||||||||| ||| || || Sbjct: 67 gacgaaacgcttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaa 126 Query: 61 cct-tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 119 || ||| |||||| ||||||| ||| ||| | |||||||||||||| |||||||||| Sbjct: 127 cccctttgtactgcc-gctgaattcataagcggataagagacaacctggtgaactgaaac 185 Query: 120 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179 ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 186 atcttagtaaccagaggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaat 245 Query: 180 gggagcagcctaaa 193 ||||| |||||||| Sbjct: 246 gggagaagcctaaa 259
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 234 bits (118), Expect = 3e-58 Identities = 266/312 (85%), Gaps = 10/312 (3%) Strand = Plus / Plus Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 439 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 498 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 499 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 558 | || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atggtt 620 Query: 559 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 618 ||| |||| |||||| |||| |||||||||| |||||| ||||||||||||||| Sbjct: 621 aag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcact 674 Query: 619 gcttatggaccc 630 | |||||||||| Sbjct: 675 gtttatggaccc 686 Score = 172 bits (87), Expect = 9e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| || || ||||||| ||||| |||||||| |||||| || Sbjct: 67 gacgaaatgcttcggggagctgcgaacaagcataaatccgaagattcccgaatagggtaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| |||| |||| || | |||| ||||| ||||| | ||||||||||| Sbjct: 127 cctcttgtactacctgtagaattaataatcaggttagagaaaacctagtgaactgaaaca 186 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 187 tcttagtagctagaggaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacg 246 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtggga 215 ||| |||||||||||| |||| ||||||||||||| Sbjct: 247 ggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 262 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 321 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 322 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 381 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 382 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 441 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 442 gtagtgaaatagaacgtgaaa 462 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 9e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 63 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 64 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 123 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 124 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 183 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 184 gcagcctaaaccgtgaaaacggggttg 210 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 105 bits (53), Expect = 2e-19 Identities = 113/130 (86%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 ||||||| |||| ||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggc-ttggttaa 624 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 || |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 625 gg----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgc 679 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 680 ttatggaccc 689
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434040 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 19433981 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19433980 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 19433921 Query: 121 t 121 | Sbjct: 19433920 t 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 489 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 530 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 407 taccgtgagggaaaggtgaaaagaacc 433 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 232 bits (117), Expect = 1e-57 Identities = 199/223 (89%), Gaps = 10/223 (4%) Strand = Plus / Plus Query: 408 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 467 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 468 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 527 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 528 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 587 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggctt-ggttaagggaac-----ccaccggagccgtagc 170 Query: 588 gaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 171 gaaagcgagtcttcatagggcaattgtcactgcttatggaccc 213
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51567 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 51508 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51507 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 51448 Query: 121 t 121 | Sbjct: 51447 t 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Minus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119531 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119472 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119412 Query: 121 t 121 | Sbjct: 119411 t 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6091 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 6150 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6151 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 6210 Query: 121 t 121 | Sbjct: 6211 t 6211
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 143 bits (72), Expect = 8e-31 Identities = 156/184 (84%) Strand = Plus / Plus Query: 13 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 72 ||||||| || || ||||| | ||||||||||||||| ||| || |||||| ||| Sbjct: 66 cggggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactc 125 Query: 73 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 132 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 133 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 192 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 193 accg 196 |||| Sbjct: 246 accg 249 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 574 accggagccgtagcgaaagcgagtcttaatagggcgattgtcact 618 ||||||||| ||||||||||||||| ||||||||| ||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcact 668
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 1670 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 119 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 224 bits (113), Expect = 3e-55 Identities = 267/317 (84%), Gaps = 11/317 (3%) Strand = Plus / Plus Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggc-c 1019 Query: 554 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 613 |||||||||| | |||| |||||||||||||||||||| | |||||| || Sbjct: 1020 tggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatg 1072 Query: 614 tcactgcttatggaccc 630 |||||| |||||||||| Sbjct: 1073 tcactgtttatggaccc 1089 Score = 167 bits (84), Expect = 6e-38 Identities = 142/160 (88%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 38 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 97 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 98 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 157 ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 564 agacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattc 623 Query: 158 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 197 || |||||| ||||||||||| |||| ||||||||||||| Sbjct: 624 ccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 224 bits (113), Expect = 3e-55 Identities = 219/250 (87%), Gaps = 7/250 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 433 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553 | | |||||||||||||||||||||||||||||||||||||| || | |||||| | Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggc-t 588 Query: 554 tggttaaggg 563 |||||||||| Sbjct: 589 tggttaaggg 598 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 101 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 160 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 161 tagtagcggcgagcgaaatgggagcagcctaaac 194 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 222 bits (112), Expect = 1e-54 Identities = 218/250 (87%), Gaps = 10/250 (4%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 492 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggtt 667 Query: 553 ttggttaagg 562 |||||||||| Sbjct: 668 ttggttaagg 677 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 574 accggagccgtagcgaaagcgagtcttaatagggcg 609 ||||||||| ||||||||||||||| ||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcg 720
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 457 gtgaaa 462 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 ag 184 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 457 gtgaaa 462 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 agcagcctaa 192 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 216 bits (109), Expect = 7e-53 Identities = 137/145 (94%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 5 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 64 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 89811 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 89752 Query: 65 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 124 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 89751 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 89693 Query: 125 agtagccagaggaaaagaaagcaaa 149 | ||||||||||||||||||||||| Sbjct: 89692 actagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 216 bits (109), Expect = 7e-53 Identities = 137/145 (94%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 5 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 64 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 459 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 518 Query: 65 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 124 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 519 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 577 Query: 125 agtagccagaggaaaagaaagcaaa 149 | ||||||||||||||||||||||| Sbjct: 578 actagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 155 ttcccgtagtagcggcgagcgaaatggga 183 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccg 465 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 149 bits (75), Expect = 1e-32 Identities = 165/195 (84%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| ||| Sbjct: 46 gacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggcaa 105 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| |||| ||| | ||| ||| || |||||||||| |||| || ||||||||||| Sbjct: 106 cctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaaca 165 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 ||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| | Sbjct: 166 tctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaag 225 Query: 181 ggagcagcctaaacc 195 ||| ||||||||||| Sbjct: 226 ggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 585 agcgaaagcgagtcttaatagggc 608 ||||||||||||||| |||||||| Sbjct: 873 agcgaaagcgagtctgaatagggc 896
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 457 gtgaaa 462 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 4 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 62 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 63 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 122 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 123 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 182 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 183 ag 184 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 91 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 150 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 151 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 174 cgaaatgggagcagcctaaacc 195 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 586 gcgaaagcgagtcttaatagggcga 610 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 206 bits (104), Expect = 6e-50 Identities = 195/221 (88%), Gaps = 12/221 (5%) Strand = Plus / Plus Query: 410 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 469 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 470 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 529 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 530 ccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcga 589 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggctt-ggttaagggaac-----ccaccggagccgtagcga 168 Query: 590 aagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 169 aagcgagtcttcatagggcaattgtcactgcttatggaccc 209
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 204 bits (103), Expect = 3e-49 Identities = 216/250 (86%), Gaps = 9/250 (3%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 492 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||| || |||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggc- 619 Query: 553 ttggttaagg 562 |||||||||| Sbjct: 620 ttggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 204 bits (103), Expect = 3e-49 Identities = 216/250 (86%), Gaps = 9/250 (3%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 492 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||| || |||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggc- 619 Query: 553 ttggttaagg 562 |||||||||| Sbjct: 620 ttggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 434 cc 435 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 93 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 152 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 153 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 91.7 bits (46), Expect = 3e-15 Identities = 56/58 (96%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 505 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggttaagg 618 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagat 45 |||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 67 gacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 439 tgggtagtgaaatagaacgtgaaacc 464 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| || || ||| ||| ||||| |||||||| |||||| || Sbjct: 1834 gacgaaatgcttcggggagctgcgaacaagtataaatccgaagattcccgaatagggtaa 1893 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| |||| |||| || | |||| ||||| ||||| | ||||||||||| Sbjct: 1894 cctcttgtactacctgtataatcaataatcaggttagagaaaacctagtgaactgaaaca 1953 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| | Sbjct: 1954 tcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacg 2013 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtggga 215 ||| | ||||||||||| ||| ||||||||||||| Sbjct: 2014 ggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 198 bits (100), Expect = 2e-47 Identities = 209/238 (87%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 375 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 491 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 552 tt 553 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 174 cgaa 177 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 586 gcgaaagcgagtcttaatagggcg 609 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 174 cgaaatgggagcagcctaaacc 195 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaa 602 |||||||| |||||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa 847
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 170 cgagcgaaatgggagcagcctaaac 194 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctagggttaagg 639 Score = 58.0 bits (29), Expect = 4e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggaccc 630 |||||||| ||||||||| ||||| ||||||||| ||||||||| ||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggaccc 704 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 63 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggaccc 759 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 63 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 174 cgaaatgggagcagcctaaacc 195 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 375 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 491 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 552 tt 553 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 174 cgaa 177 |||| Sbjct: 219 cgaa 222 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 586 gcgaaagcgagtcttaatagggcg 609 |||||||||||||| ||||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcg 671
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 151758 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 42445 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Minus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggaccc 151682 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggaccc 42521
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 375 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 491 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 552 tt 553 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 114 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 173 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 174 cgaa 177 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 586 gcgaaagcgagtcttaatagggcg 609 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggaccc 759 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 63 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 170 cgagcgaaatgggagcagcctaaac 194 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctagggttaagg 639 Score = 58.0 bits (29), Expect = 4e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggaccc 630 |||||||| ||||||||| ||||| ||||||||| ||||||||| ||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggaccc 704 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 63 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 617 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggaccc 693
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 702 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggaccc 778
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Minus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 434 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 492 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 155605 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 434 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 492 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 78287 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/58 (87%), Gaps = 2/58 (3%) Strand = Plus / Minus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggaccc 155529 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/58 (87%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggaccc 78363 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 68 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 69 a 69 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 68 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 69 a 69 | Sbjct: 77725 a 77725
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 318 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 377 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 378 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 437 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 438 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 497 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 498 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 546 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| ||| Sbjct: 46 gacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggcaa 105 Query: 61 cct 63 ||| Sbjct: 106 cct 108 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcgat 611 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgat 657
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 423 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 482 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 483 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 532 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 439 tgggtagtgaaatagaacgtgaaacc 464 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||||||||||||||| || || ||| ||||||||| |||||||| |||||| ||| Sbjct: 67 gacgaaatgcttcggggagctgcgaacaagtatagatccgaagattcccgaatagggcaa 126 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| |||| ||| ||| | |||| ||||| ||||| | ||||||||||| Sbjct: 127 cctcttgtactacctgtaaaatacataatcaggttagagaaaacctagtgaactgaaaca 186 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| | Sbjct: 187 tcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacg 246 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggaga 217 ||| ||||||||||||||||| ||||||||||||||| Sbjct: 247 ggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 109 bits (55), Expect = 1e-20 Identities = 111/127 (87%), Gaps = 7/127 (5%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 563 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atggttaag-- 623 Query: 564 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 623 |||| |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 624 ---ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactgttta 679 Query: 624 tggaccc 630 ||||||| Sbjct: 680 tggaccc 686
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 439 tgggtagtgaaatagaacgtgaaacc 464 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 168 bits (85), Expect = 1e-38 Identities = 184/217 (84%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 |||||||||||| |||||| || || ||| ||||||||| |||||||| |||||| ||| Sbjct: 3101 gacgaaatgctttggggagctgcgaacaagtatagatccgaagattcccgaatagggcaa 3160 Query: 61 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 120 ||| || ||| |||| ||| ||| |||| ||||| ||||| | ||||||||||| Sbjct: 3161 cctcttgtactacctgtaaaatacatagtcaggttagagaaaacctagtgaactgaaaca 3220 Query: 121 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180 |||||||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| | Sbjct: 3221 tcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacg 3280 Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggaga 217 ||| ||||||||||||||||| ||||||||||||||| Sbjct: 3281 ggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 109 bits (55), Expect = 1e-20 Identities = 111/127 (87%), Gaps = 7/127 (5%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 563 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atggttaag-- 3657 Query: 564 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 623 |||| |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 3658 ---ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactgttta 3713 Query: 624 tggaccc 630 ||||||| Sbjct: 3714 tggaccc 3720
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 60 ||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| ||| Sbjct: 24855 gacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggcaa 24914 Query: 61 cct 63 ||| Sbjct: 24915 cct 24917 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcgat 611 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgat 25466
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 194 bits (98), Expect = 2e-46 Identities = 108/110 (98%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 521 aagaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggag 580 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggctt-ggttaagggaacggaacccaccggag 60 Query: 581 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 ccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 110
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 318 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 377 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 378 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 437 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 438 gtgggtagtgaaatagaacgtgaaaccgt 466 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 511 gtgcctgttgaagaatgagccggcgactcatagg 544 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 192 bits (97), Expect = 1e-45 Identities = 107/109 (98%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 522 agaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagc 581 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggctt-ggttaagggaacggaacccaccggagc 59 Query: 582 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 60 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 108
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggaccc 702 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 63 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 |||| |||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 634 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/54 (87%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 579 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggaccc 630 |||| |||||||||||||||| ||||||||| | |||||| ||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggaccc 709
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 490 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 490 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 96 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 155 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 156 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 96 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 155 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 156 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 170883 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 122043 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 gatccggagattcccaaataggtcaacct 63 ||||||||||||||| |||||| |||||| Sbjct: 171418 gatccggagattcccgaatagggcaacct 171390 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 gatccggagattcccaaataggtcaacct 63 ||||||||||||||| |||||| |||||| Sbjct: 121508 gatccggagattcccgaatagggcaacct 121536
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 186 bits (94), Expect = 6e-44 Identities = 122/130 (93%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 120 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 121 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 175 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 176 ttatggaccc 185
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 186 bits (94), Expect = 6e-44 Identities = 122/130 (93%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 104 Query: 561 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 620 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 105 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 159 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 160 ttatggaccc 169
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 186 bits (94), Expect = 6e-44 Identities = 205/238 (86%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 495 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 797 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 96 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 155 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 156 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 575 ccggagccgtagcgaaagcgagtcttaatagggcga 610 |||||||| ||||||||||||||||||||||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcga 851
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 490 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 96 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 155 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 156 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 634 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 gatccggagattcccaaataggtcaacct 63 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 433 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgt 466 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 83.8 bits (42), Expect = 6e-13 Identities = 110/130 (84%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 562 |||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggc-ttggttaagg 687 Query: 563 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 620 ||| | |||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 688 ----agaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcacttt 743 Query: 621 ttatggaccc 630 |||||||||| Sbjct: 744 ttatggaccc 753
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 434 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 490 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 491 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 113 bits (57), Expect = 7e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 3 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 62 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 63 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 121 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 122 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 181 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 182 gagcagcctaaac 194 || |||||||||| Sbjct: 229 gaacagcctaaac 241 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 585 agcgaaagcgagtcttaatagggcg 609 ||||||||||||||| ||||||||| Sbjct: 643 agcgaaagcgagtctgaatagggcg 667
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 151 bits (76), Expect = 3e-33 Identities = 160/188 (85%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 68 ||||||||||| || || |||| | |||||| |||||||| |||||| ||||||| || Sbjct: 62 gcttcggggagctggaatcaagctttgatccgaagattcccgaatagggcaaccttatat 121 Query: 69 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 128 ||| |||| ||||| ||| |||| ||||||||||| |||||| ||||||||||||||| Sbjct: 122 acttcctgttgaattcatagacaggtaagagacaacccggcgaattgaaacatcttagta 181 Query: 129 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 188 ||| | ||||||||||||||| ||||||||| |||||| ||||||||||| |||| ||| Sbjct: 182 gccggtggaaaagaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcagt 241 Query: 189 ctaaaccg 196 |||||||| Sbjct: 242 ctaaaccg 249 Score = 97.6 bits (49), Expect = 4e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaag 561 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggttaag 614 Query: 562 g 562 | Sbjct: 615 g 615 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 574 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 ||||||||| ||||||||| ||||| ||||||||| |||| |||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggaccc 678
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 68 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 69 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 128 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 129 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 188 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 189 ctaaacc 195 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631 Score = 54.0 bits (27), Expect = 6e-04 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 585 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 ||||||||||||||||||||||||| || |||||| ||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggaccc 707
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 110 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 169 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 170 cgagcgaaatgggagcagcctaaacc 195 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 178 bits (90), Expect = 1e-41 Identities = 167/188 (88%), Gaps = 11/188 (5%) Strand = Plus / Plus Query: 444 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 503 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 563 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaag-- 364802 Query: 564 aacggaacccaccggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctt 622 ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct: 364803 ---ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctt 364859 Query: 623 atggaccc 630 |||||||| Sbjct: 364860 atggaccc 364867 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 389 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 9 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 68 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 69 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 128 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 129 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 188 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 189 ctaaacc 195 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631 Score = 54.0 bits (27), Expect = 6e-04 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 585 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 630 ||||||||||||||||||||||||| || |||||| ||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggaccc 707
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 318 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 377 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 378 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 437 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 438 gtgggtagtgaaatagaacgtgaaaccgt 466 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcga 536 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 585 agcgaaagcgagtcttaatagggcgattgtcac 617 |||||||||||||| |||||||||||| ||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcac 294
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 435 ccagt-gggtagtgaaatagaacgtgaaaccgt 466 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 95 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 154 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgact 538 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 108 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 167 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 168 ggcgagcgaaatgggagcagcctaaacc 195 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 577 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 616 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 108 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 167 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 168 ggcgagcgaaatgggagcagcctaaacc 195 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 577 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 616 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 111 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 170 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 171 gagcgaaatgggagcagcctaaacc 195 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 577 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 630 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagaccc 538 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,295,181 Number of Sequences: 3902068 Number of extensions: 4295181 Number of successful extensions: 127084 Number of sequences better than 10.0: 26652 Number of HSP's better than 10.0 without gapping: 26481 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 79937 Number of HSP's gapped (non-prelim): 44930 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
