Clone Name | basd2h17 |
---|---|
Clone Library Name | barley_pub |
>IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 496 Score = 36.2 bits (82), Expect = 0.080 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKNSDRCRSSDAQE 593 +SGLPVVD+ + VG++ D +A K+ DVMT + C D +E Sbjct: 121 ISGLPVVDNEDKLVGIITHRD-VKAIEDKTKKVKDVMTKDVV----------CAKEDVEE 169 Query: 594 ED 599 E+ Sbjct: 170 EE 171
>Y922_METJA (Q58332) Hypothetical protein MJ0922| Length = 138 Score = 33.5 bits (75), Expect = 0.52 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSD----RARASHGSRTKIADVMTSPAITLSCD 554 +S LPV+D + +G+V +D R + T I DVMT IT+ D Sbjct: 39 ISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHED 89
>Y100_METJA (Q57564) Hypothetical protein MJ0100| Length = 509 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSR 503 +SG+PVVD RR VG+V D +R G + Sbjct: 480 ISGVPVVDDYRRVVGIVTSEDISRLFGGKK 509 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKNSD 566 ++ LP+VD + VG++ D A+A ++ I ++MT IT D+ D Sbjct: 419 INHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAHEDEPVD 469
>T3RE_SALTY (P40815) Type III restriction-modification system StyLTI enzyme res| (EC 3.1.21.5) Length = 990 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +2 Query: 155 GSGLRLGLDENPDAIISGEWPENFS-LLSYDD 247 G GLRL +DEN + EWP S L+ YD+ Sbjct: 534 GRGLRLPVDENGHRVHQEEWPSRLSFLIGYDE 565
>IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 481 Score = 30.0 bits (66), Expect = 5.7 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTS-PAIT----LSCDKNSD 566 +SG+PVVD +G++ D R K+ DVMT P +T +S D+ SD Sbjct: 117 ISGVPVVDDKGLLIGILTNRD-VRFETDLSKKVGDVMTKMPLVTAHVGISLDEASD 171
>IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 481 Score = 30.0 bits (66), Expect = 5.7 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTS-PAIT----LSCDKNSD 566 +SG+PVVD +G++ D R K+ DVMT P +T +S D+ SD Sbjct: 117 ISGVPVVDDKGLLIGILTNRD-VRFETDLSKKVGDVMTKMPLVTAHVGISLDEASD 171
>IMDH_MYCTU (P65167) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMT-SPAIT 542 +SGLPVVD VG++ D R ++A+VMT +P IT Sbjct: 154 ISGLPVVDDDGALVGIITNRD-MRFEVDQSKQVAEVMTKAPLIT 196
>IMDH_MYCLE (Q49729) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMT-SPAITLSCDKNSD 566 +SGLPVVD + G++ D R ++A+VMT +P IT + ++D Sbjct: 154 ISGLPVVDDSGALAGIITNRD-MRFEVDQSKQVAEVMTKTPLITAAEGVSAD 204
>IMDH_MYCBO (P65168) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMT-SPAIT 542 +SGLPVVD VG++ D R ++A+VMT +P IT Sbjct: 154 ISGLPVVDDDGALVGIITNRD-MRFEVDQSKQVAEVMTKAPLIT 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,729,737 Number of Sequences: 219361 Number of extensions: 955610 Number of successful extensions: 2804 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2728 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2804 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)