ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2f21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194498.1| Oryza sativa (japonica cultivar-group) hypothet... 127 4e-26
2ref|XM_477275.1| Oryza sativa (japonica cultivar-group), mRNA 127 4e-26
3gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
4gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
7dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
8dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
9dbj|AK101732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
11ref|XM_474688.1| Oryza sativa (japonica cultivar-group), predic... 111 2e-21
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
13emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 111 2e-21
14dbj|AK071690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
15ref|XM_468088.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
17gb|AC152723.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 44 0.44
18dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
19gb|AC010849.3|AC010849 Homo sapiens chromosome 14 clone CTD-2540... 42 1.7
20emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-9... 42 1.7
21gb|AC157495.2| Gallus gallus BAC clone CH261-13P20 from chromoso... 42 1.7
22gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
23gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
24gb|AC124353.5| Mus musculus BAC clone RP24-481I14 from chromosom... 40 6.9
25gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
26gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
27gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosom... 40 6.9
28gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complet... 40 6.9
29gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ... 40 6.9
30dbj|AK138503.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 6.9
31gb|AC108158.5| Homo sapiens BAC clone RP11-587F3 from 4, complet... 40 6.9
32gb|AC095059.3| Homo sapiens BAC clone RP11-428L21 from 4, comple... 40 6.9
33gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.9
34gb|AF314540.1|AF314540 Rattus norvegicus heat shock protein 22 m... 40 6.9
35gb|BC061748.1| Rattus norvegicus heat shock 22kDa protein 8, mRN... 40 6.9
36dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
38dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
41ref|NM_053612.2| Rattus norvegicus heat shock 22kDa protein 8 (H... 40 6.9
42gb|AC005519.3|AC005519 Homo sapiens PAC clone RP5-919J22 from 14... 40 6.9
43dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
44dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
45dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
46dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
47emb|Y14320.1|HSPMP693 Homo sapiens PMP69 gene, exons 3,4,5,6 & 7 40 6.9
48gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
49gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
50emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.9
51gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, compl... 40 6.9
52gb|DQ080083.1| Human papillomavirus type 102, complete genome 40 6.9 
>ref|NM_194498.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0096E22.9), mRNA
          Length = 1110

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                       
Query: 313 atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
           |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 1   atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 60

                                                                       
Query: 373 tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
           || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 61  tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 120

                                                               
Query: 433 ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
           |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 121 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 172
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>ref|XM_477275.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1463

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                       
Query: 313 atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
           |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 251 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 310

                                                                       
Query: 373 tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
           || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 311 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 370

                                                               
Query: 433 ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
           |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 371 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 422
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                          
Query: 313    atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
              |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 207765 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 207824

                                                                          
Query: 373    tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
              || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 207825 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 207884

                                                                  
Query: 433    ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
              |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 207885 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 207936
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>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0096E22, complete sequence
          Length = 133846

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                         
Query: 313   atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
             |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 57428 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 57487

                                                                         
Query: 373   tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
             || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 57488 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 57547

                                                                 
Query: 433   ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
             |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 57548 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 57599
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                          
Query: 313    atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
              |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 207765 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 207824

                                                                          
Query: 373    tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
              || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 207825 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 207884

                                                                  
Query: 433    ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
              |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 207885 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 207936
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                           
Query: 313     atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
               |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 8302822 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 8302763

                                                                           
Query: 373     tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
               || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 8302762 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 8302703

                                                                   
Query: 433     ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
               |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 8302702 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 8302651
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>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0021G06
          Length = 137678

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                        
Query: 313  atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
            |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 7920 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 7861

                                                                        
Query: 373  tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
            || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 7860 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 7801

                                                                
Query: 433  ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
            |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 7800 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 7749
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>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0639B07
          Length = 138780

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                         
Query: 313   atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
             |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 97934 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 97875

                                                                         
Query: 373   tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
             || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 97874 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 97815

                                                                 
Query: 433   ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
             |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 97814 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 97763
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>dbj|AK101732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G11, full
           insert sequence
          Length = 1613

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                       
Query: 313 atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
           |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 251 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 310

                                                                       
Query: 373 tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
           || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 311 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 370

                                                               
Query: 433 ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
           |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 371 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 422
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                          
Query: 313    atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
              |||||||| || ||||| |||||||| |||||||| || || || || || || ||| ||
Sbjct: 207763 atggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgca 207822

                                                                          
Query: 373    tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
              || ||||| |  ||||| |||   ||||||||||| ||||||||||||||||||||||||
Sbjct: 207823 tcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgt 207882

                                                                  
Query: 433    ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
              |||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 207883 ggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaata 207934
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>ref|XM_474688.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1218

 Score =  111 bits (56), Expect = 2e-21
 Identities = 143/172 (83%)
 Strand = Plus / Plus

                                                                       
Query: 313 atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
           |||||||| || |||||| |||||||||| ||||| ||  | || || || |  ||| ||
Sbjct: 103 atggtgaaaaaacattcagatttgatcggctggacagttattgatgctgaagctgatgca 162

                                                                       
Query: 373 tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
           || ||||| || ||||| ||||| ||||||||||| || ||||||||||||||||||| |
Sbjct: 163 tcagacgtggaaatggatgataaattctggcatgaaatacttgatcttttcttcgtgcat 222

                                                               
Query: 433 ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
           |||||||| |||| | | ||||||||||| ||||| ||||||||||| ||||
Sbjct: 223 ggtagggtttcaaaggggagggaagaggatgaccttgtcttctttgttaata 274
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 2e-21
 Identities = 143/172 (83%)
 Strand = Plus / Minus

                                                                           
Query: 313     atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
               |||||||| || |||||| |||||||||| ||||| ||  | || || || |  ||| ||
Sbjct: 5629541 atggtgaaaaaacattcagatttgatcggctggacagttattgatgctgaagctgatgca 5629482

                                                                           
Query: 373     tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
               || ||||| || ||||| ||||| ||||||||||| || ||||||||||||||||||| |
Sbjct: 5629481 tcagacgtggaaatggatgataaattctggcatgaaatacttgatcttttcttcgtgcat 5629422

                                                                   
Query: 433     ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
               |||||||| |||| | | ||||||||||| ||||| ||||||||||| ||||
Sbjct: 5629421 ggtagggtttcaaaggggagggaagaggatgaccttgtcttctttgttaata 5629370
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>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
             complete sequence
          Length = 162227

 Score =  111 bits (56), Expect = 2e-21
 Identities = 143/172 (83%)
 Strand = Plus / Minus

                                                                         
Query: 313   atggtgaagaagcattcacatttgatcgggtggactgtcgtcgaggccgaggacgatcca 372
             |||||||| || |||||| |||||||||| ||||| ||  | || || || |  ||| ||
Sbjct: 86748 atggtgaaaaaacattcagatttgatcggctggacagttattgatgctgaagctgatgca 86689

                                                                         
Query: 373   tcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgcgt 432
             || ||||| || ||||| ||||| ||||||||||| || ||||||||||||||||||| |
Sbjct: 86688 tcagacgtggaaatggatgataaattctggcatgaaatacttgatcttttcttcgtgcat 86629

                                                                 
Query: 433   ggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
             |||||||| |||| | | ||||||||||| ||||| ||||||||||| ||||
Sbjct: 86628 ggtagggtttcaaaggggagggaagaggatgaccttgtcttctttgttaata 86577
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>dbj|AK071690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114H04, full
           insert sequence
          Length = 1741

 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                       
Query: 371 catcggacgtcgagatggacgataagttctggcatgagatgcttgatcttttcttcgtgc 430
           |||| ||||| || ||||| ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 296 catcagacgtggaaatggatgataaattctggcatgaaatacttgatcttttcttcgtgc 355

                                                                 
Query: 431 gtggtagggtgtcaaggagcagggaagaggacgacctcgtcttctttgtcaata 484
            ||||||||| |||| | | ||||||||||| ||||| ||||||||||| ||||
Sbjct: 356 atggtagggtttcaaaggggagggaagaggatgaccttgtcttctttgttaata 409
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>ref|XM_468088.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 774

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 203 cgccgccttccacctcctcgccgtcc 228
           ||||||| ||||||||||||||||||
Sbjct: 214 cgccgccctccacctcctcgccgtcc 189
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 203      cgccgccttccacctcctcgccgtcc 228
                ||||||| ||||||||||||||||||
Sbjct: 32984579 cgccgccctccacctcctcgccgtcc 32984554
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>gb|AC152723.3| Ornithorhynchus anatinus chromosome UNK clone OABb-121A1, complete
             sequence
          Length = 142600

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 207   gccttccacctcctcgccgtcc 228
             ||||||||||||||||||||||
Sbjct: 54370 gccttccacctcctcgccgtcc 54349
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 203   cgccgccttccacctcctcgccgtcc 228
             ||||||| ||||||||||||||||||
Sbjct: 30519 cgccgccctccacctcctcgccgtcc 30494
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>gb|AC010849.3|AC010849 Homo sapiens chromosome 14 clone CTD-2540C19 map 14q31, complete
            sequence
          Length = 151659

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 489  gatgcagaaaatggaagatct 509
            |||||||||||||||||||||
Sbjct: 6807 gatgcagaaaatggaagatct 6787
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>emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-959A22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168677

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 489   gatgcagaaaatggaagatct 509
             |||||||||||||||||||||
Sbjct: 13555 gatgcagaaaatggaagatct 13575
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>gb|AC157495.2| Gallus gallus BAC clone CH261-13P20 from chromosome unknown, complete
             sequence
          Length = 228855

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   ctccccccgtcgcgatggcgg 202
             |||||||||||||||||||||
Sbjct: 88359 ctccccccgtcgcgatggcgg 88339
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>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05,
             complete sequence
          Length = 109853

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   cggcgccgccttccacctcc 219
             ||||||||||||||||||||
Sbjct: 76305 cggcgccgccttccacctcc 76286
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>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11,
             complete sequence
          Length = 177574

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   cggcgccgccttccacctcc 219
             ||||||||||||||||||||
Sbjct: 48391 cggcgccgccttccacctcc 48372
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>gb|AC124353.5| Mus musculus BAC clone RP24-481I14 from chromosome 12, complete sequence
          Length = 152881

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     ctccgtctccgtctcccttcccct 35
              |||||||| |||||||||||||||
Sbjct: 133981 ctccgtcttcgtctcccttcccct 134004
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>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete
             sequence
          Length = 208661

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tctccgtctcccttcccctt 36
             ||||||||||||||||||||
Sbjct: 68854 tctccgtctcccttcccctt 68873
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>gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0060B06, complete sequence
          Length = 162568

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     ctccgtctccgtctcccttcccct 35
              |||||||||||||||||| |||||
Sbjct: 102326 ctccgtctccgtctccctccccct 102349
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>gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosome 12, complete
             sequence
          Length = 189420

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tctcccttccccttgcttgc 42
             ||||||||||||||||||||
Sbjct: 92260 tctcccttccccttgcttgc 92279
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>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence
          Length = 215406

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    gctccgtctccgtctccctt 30
             ||||||||||||||||||||
Sbjct: 56872 gctccgtctccgtctccctt 56853
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>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
              gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 49     cgagagtctcctccgctggcgggg 72
              |||||||||||||| |||||||||
Sbjct: 160271 cgagagtctcctccactggcgggg 160294
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>dbj|AK138503.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330043P19 product:hypothetical
            PDZ/DHR/GLGF domain/PDZ domain profile containing
            protein, full insert sequence
          Length = 1360

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   ctccgtctccgtctcccttcccct 35
            |||||||| |||||||||||||||
Sbjct: 1070 ctccgtcttcgtctcccttcccct 1047
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>gb|AC108158.5| Homo sapiens BAC clone RP11-587F3 from 4, complete sequence
          Length = 10302

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  gtcaaggagcagggaagagg 460
            ||||||||||||||||||||
Sbjct: 1192 gtcaaggagcagggaagagg 1211
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>gb|AC095059.3| Homo sapiens BAC clone RP11-428L21 from 4, complete sequence
          Length = 109586

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    gtcaaggagcagggaagagg 460
              ||||||||||||||||||||
Sbjct: 108778 gtcaaggagcagggaagagg 108797
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 155     ccacgcgcgtcccctcctgatccc 178
               ||||||||||||||||| ||||||
Sbjct: 3310469 ccacgcgcgtcccctccagatccc 3310446
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>gb|AF314540.1|AF314540 Rattus norvegicus heat shock protein 22 mRNA, complete cds
          Length = 633

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tcctacccaagccgcttgcg 103
           ||||||||||||||||||||
Sbjct: 73  tcctacccaagccgcttgcg 92
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>gb|BC061748.1| Rattus norvegicus heat shock 22kDa protein 8, mRNA (cDNA clone
           MGC:72354 IMAGE:5599613), complete cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tcctacccaagccgcttgcg 103
           ||||||||||||||||||||
Sbjct: 391 tcctacccaagccgcttgcg 410
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 270     cggcgacggccaggcagcgccctc 293
               ||||||||||| ||||||||||||
Sbjct: 8263243 cggcgacggcccggcagcgccctc 8263220
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 12       ctccgtctccgtctcccttcccct 35
                |||||||||||||||||| |||||
Sbjct: 20559532 ctccgtctccgtctccctccccct 20559555
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      tctcccttccccttgcttgc 42
               ||||||||||||||||||||
Sbjct: 5915225 tctcccttccccttgcttgc 5915206
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 198     ggcggcgccgccttccacctcctcgccg 225
               |||||||||||||||| ||||| |||||
Sbjct: 5649268 ggcggcgccgccttccgcctccccgccg 5649295
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      cggcgccgccttccacctcc 219
                ||||||||||||||||||||
Sbjct: 15962640 cggcgccgccttccacctcc 15962621
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>ref|NM_053612.2| Rattus norvegicus heat shock 22kDa protein 8 (Hspb8), mRNA
          Length = 1795

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tcctacccaagccgcttgcg 103
           ||||||||||||||||||||
Sbjct: 391 tcctacccaagccgcttgcg 410
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>gb|AC005519.3|AC005519 Homo sapiens PAC clone RP5-919J22 from 14q24.3, complete sequence
          Length = 163983

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     tctcccttccccttgcttgcccca 46
              |||||||||||||||||| |||||
Sbjct: 118509 tctcccttccccttgcttccccca 118532
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>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0073I05
          Length = 182291

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tctcccttccccttgcttgc 42
              ||||||||||||||||||||
Sbjct: 102335 tctcccttccccttgcttgc 102316
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>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021C04
          Length = 162115

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 198   ggcggcgccgccttccacctcctcgccg 225
             |||||||||||||||| ||||| |||||
Sbjct: 41415 ggcggcgccgccttccgcctccccgccg 41442
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>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1114_D06
          Length = 107621

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   tctcccttccccttgcttgc 42
            ||||||||||||||||||||
Sbjct: 8328 tctcccttccccttgcttgc 8309
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>dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090N24, full
           insert sequence
          Length = 1410

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 198 ggcggcgccgccttccacctcctcgccg 225
           |||||||||||||||| ||||| |||||
Sbjct: 174 ggcggcgccgccttccgcctccccgccg 201
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>emb|Y14320.1|HSPMP693 Homo sapiens PMP69 gene, exons 3,4,5,6 & 7
          Length = 6060

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 23   tctcccttccccttgcttgcccca 46
            |||||||||||||||||| |||||
Sbjct: 2017 tctcccttccccttgcttccccca 2040
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 12       ctccgtctccgtctcccttcccct 35
                |||||||||||||||||| |||||
Sbjct: 20869767 ctccgtctccgtctccctccccct 20869790
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 270     cggcgacggccaggcagcgccctc 293
               ||||||||||| ||||||||||||
Sbjct: 8263124 cggcgacggcccggcagcgccctc 8263101
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>emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa0095H15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142670

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 270   cggcgacggccaggcagcgccctc 293
             ||||||||||| ||||||||||||
Sbjct: 79652 cggcgacggcccggcagcgccctc 79675
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>gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     ctccgtctccgtctcccttcccct 35
              |||||||| |||||||||||||||
Sbjct: 101636 ctccgtcttcgtctcccttcccct 101613
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>gb|DQ080083.1| Human papillomavirus type 102, complete genome
          Length = 8078

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    ctgctctgctccgtctccgt 23
            ||||||||||||||||||||
Sbjct: 3391 ctgctctgctccgtctccgt 3372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,752,451
Number of Sequences: 3902068
Number of extensions: 3752451
Number of successful extensions: 77184
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76478
Number of HSP's gapped (non-prelim): 706
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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