ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2g21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB182641.1| Zea mays zcyb mRNA for cytochrome b561, complete cds Length = 958 Score = 377 bits (190), Expect = e-101 Identities = 472/566 (83%) Strand = Plus / Plus Query: 13 ggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggccgccgcc 72 |||||| |||||||||| |||||||||| ||||||||| |||||||| ||||| || ||| Sbjct: 55 ggcgtgcgggcggcgcccttcacgtacgcggcgcacgcactggccgtcgcggcggcggcc 114 Query: 73 atggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgacaacaag 132 ||||| || ||||| |||||| ||||||||||| |||||| |||| || ||||||| Sbjct: 115 atggttctcgtctggtccatccagttccgcggcgggctcgccatcgagtccaccaacaag 174 Query: 133 aacctcatcttcaacgttcatcctgttcttatgttgattggctttattattcttggcagt 192 |||||||||||||||||||| |||||||||||| | || || | | ||||| | ||| || Sbjct: 175 aacctcatcttcaacgttcaccctgttcttatgcttatcggttatgttattatcggcggt 234 Query: 193 gaagctataatggtatacaaggtacttcctacggtgaaccatgatacaactaagttgatc 252 |||||||||||||| |||| ||||||||| || ||| ||||| ||||||||| ||||| Sbjct: 235 gaagctataatggtgtacagggtacttccaacatcgaatcatgacacaactaagctgatc 294 Query: 253 catctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttc 312 |||||| | ||||| | ||||| ||||| || |||||||| || ||||||| ||||||| Sbjct: 295 catctaattctccacgggattgcacttgtccttggtgcggttggaatatactttgctttc 354 Query: 313 aagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggcttggaata 372 || ||||||||||| | ||| ||||| || | ||||| ||||| |||||| |||| ||| Sbjct: 355 aaaaatcacaatgagagtgggattgccaatctttacagcctgcactcttggattgggata 414 Query: 373 ggaacaatttctctatatggtattcagtggatatttggattcttgaccttcttcttcccc 432 ||||||||| || | |||||||||||||||||| |||||||| | || ||||||||||| Sbjct: 415 ggaacaattactttgtatggtattcagtggataattggattcgtcacgttcttcttccct 474 Query: 433 aaggctgcgccaaatgtgaggaagggtgctcttccttggcacgtacttcttggaatcttc 492 ||||||||||| |||| |||||||| |||||||||||||||||| |||| |||| Sbjct: 475 ggtgctgcgccaaacgtgaagaagggtgttcttccttggcacgtactctttgggctcttt 534 Query: 493 gtttacattttagccctggcaacggcagaacttgggtttctggagaagctcaccttcctc 552 || ||||| ||||| ||||| | |||||||| || ||||| ||||||||||| |||||| Sbjct: 535 gtctacatcttagcactggctaatgcagaactcggctttcttgagaagctcactttcctc 594 Query: 553 caaagctcaggcatcgacaaatatgg 578 | |||||||| ||||||||||||| Sbjct: 595 gagagctcaggtctcgacaaatatgg 620
>ref|XM_466997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 750 Score = 363 bits (183), Expect = 4e-97 Identities = 369/431 (85%) Strand = Plus / Plus Query: 148 gttcatcctgttcttatgttgattggctttattattcttggcagtgaagctataatggta 207 ||||| |||||||||||| | ||||||| ||| || || ||||||||||||||||||||| Sbjct: 190 gttcaccctgttcttatgcttattggctatataatcctaggcagtgaagctataatggta 249 Query: 208 tacaaggtacttcctacggtgaaccatgatacaactaagttgatccatctagtactccat 267 |||||||| |||||||| ||| ||||||||||||||| ||||||||||| | |||||| Sbjct: 250 tacaaggtccttcctacttggaagcatgatacaactaagctgatccatctaattctccat 309 Query: 268 gctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaatgaa 327 || ||||| ||||| |||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 310 gcaattgcccttgtattcggtgcggttgggatatactgcgctttcaaatttcacaatgaa 369 Query: 328 actggaattgcgaacttgtacagtctgcattcttggcttggaataggaacaatttctcta 387 | ||||||||| ||| | ||||||||||||||||||||||| || |||||||||| | | Sbjct: 370 agtggaattgccaacctctacagtctgcattcttggcttgggattggaacaatttgtttg 429 Query: 388 tatggtattcagtggatatttggattcttgaccttcttcttccccaaggctgcgccaaat 447 |||||||||||||||||||| || || | | |||||||||||| ||| |||||| Sbjct: 430 tatggtattcagtggatattcgggtttgttgctttcttcttcccccgtgcttcgccaagc 489 Query: 448 gtgaggaagggtgctcttccttggcacgtacttcttggaatcttcgtttacattttagcc 507 ||||||||||||| |||||||||||| |||| |||| ||||||| |||||||||||| Sbjct: 490 gtgaggaagggtgttcttccttggcatatactgtttgggctcttcgtctacattttagcc 549 Query: 508 ctggcaacggcagaacttgggtttctggagaagctcaccttcctccaaagctcaggcatc 567 ||||| || |||||||| || ||||| ||||||||||| ||||||||||||||||| || Sbjct: 550 ctggccaccgcagaactcggatttcttgagaagctcactttcctccaaagctcagggctc 609 Query: 568 gacaaatatgg 578 ||||||||||| Sbjct: 610 gacaaatatgg 620 Score = 222 bits (112), Expect = 1e-54 Identities = 136/144 (94%) Strand = Plus / Plus Query: 4 atggggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcg 63 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggggctcggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcg 60 Query: 64 gccgccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagcc 123 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 61 gccgccaccatggtgctggtctggtgcatccacttccgcggcggcctcgccttcgaggcc 120 Query: 124 gacaacaagaacctcatcttcaac 147 ||||||||||||||||||||| Sbjct: 121 acaaacaagaacctcatcttcaac 144
>gb|AY104321.1| Zea mays PCO083972 mRNA sequence Length = 1138 Score = 361 bits (182), Expect = 2e-96 Identities = 470/566 (83%) Strand = Plus / Plus Query: 13 ggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggccgccgcc 72 |||||| |||||||||| |||||||||| ||||||||| |||||||| ||||| || ||| Sbjct: 231 ggcgtgcgggcggcgcccttcacgtacgcggcgcacgcactggccgtcgcggcggcggcc 290 Query: 73 atggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgacaacaag 132 ||||| || ||||| |||||| |||||||| || |||||| |||| || ||||||| Sbjct: 291 atggttctcgtctggtccatccagttccgcggtgggctcgccatcgagtccaccaacaag 350 Query: 133 aacctcatcttcaacgttcatcctgttcttatgttgattggctttattattcttggcagt 192 |||||||||||||||||||| |||||||||||| | || || | | ||||| | ||| || Sbjct: 351 aacctcatcttcaacgttcaccctgttcttatgcttatcggttatgttattatcggcggt 410 Query: 193 gaagctataatggtatacaaggtacttcctacggtgaaccatgatacaactaagttgatc 252 |||||||||||||| |||| ||||||||| || ||| ||||| ||||||||| ||||| Sbjct: 411 gaagctataatggtgtacagggtacttccaacatcgaatcatgacacaactaagctgatc 470 Query: 253 catctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttc 312 |||||| | ||||| | ||||| || || || |||||||| || ||||||| ||||||| Sbjct: 471 catctaattctccacgggattgcactcgtccttggtgcggttggaatatactttgctttc 530 Query: 313 aagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggcttggaata 372 || ||||||||||| | ||| ||||| || | ||||| ||||| |||||| |||| ||| Sbjct: 531 aaaaatcacaatgagagtgggattgccaatctttacagcctgcactcttggattgggata 590 Query: 373 ggaacaatttctctatatggtattcagtggatatttggattcttgaccttcttcttcccc 432 ||||||||| || | |||||||||||||||||| |||||||| | || ||||||||||| Sbjct: 591 ggaacaattactttgtatggtattcagtggataattggattcgtcacgttcttcttccct 650 Query: 433 aaggctgcgccaaatgtgaggaagggtgctcttccttggcacgtacttcttggaatcttc 492 ||||||||||| |||| |||||||| |||||||||||||||||| |||| |||| Sbjct: 651 ggtgctgcgccaaacgtgaagaagggtgttcttccttggcacgtactctttgggctcttt 710 Query: 493 gtttacattttagccctggcaacggcagaacttgggtttctggagaagctcaccttcctc 552 || ||||| ||||| ||||| | |||||||| || ||||| ||||||||||| |||||| Sbjct: 711 gtctacatcttagcactggctaatgcagaactcggctttcttgagaagctcactttcctc 770 Query: 553 caaagctcaggcatcgacaaatatgg 578 | |||||||| ||||||||||||| Sbjct: 771 gagagctcaggtctcgacaaatatgg 796
>gb|AY108215.1| Zea mays PCO083971 mRNA sequence Length = 706 Score = 276 bits (139), Expect = 8e-71 Identities = 379/459 (82%) Strand = Plus / Plus Query: 13 ggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggccgccgcc 72 |||||| |||||||||| |||||||||| |||||||||||||||||| ||||| || ||| Sbjct: 216 ggcgtgcgggcggcgcccttcacgtacgcggcgcacgcgctggccgtcgcggcggcggcc 275 Query: 73 atggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgacaacaag 132 |||||| || |||| |||| |||||||||| || |||||| |||| ||| ||||||| Sbjct: 276 atggtgttggtctgggccatctacttccgcggtgggctcgccatcgaggccaccaacaag 335 Query: 133 aacctcatcttcaacgttcatcctgttcttatgttgattggctttattattcttggcagt 192 |||||||||||||||||||| |||||||||||| | || || | |||||| | ||| | Sbjct: 336 aacctcatcttcaacgttcaccctgttcttatgcttatcggttatattatcatcggcggc 395 Query: 193 gaagctataatggtatacaaggtacttcctacggtgaaccatgatacaactaagttgatc 252 ||||||||||||||||||| ||||||||| || |||||| || |||| |||| ||||| Sbjct: 396 gaagctataatggtatacagggtacttccaacatcgaaccacgagacaaataagctgatc 455 Query: 253 catctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttc 312 |||||||| ||||| | ||||| ||||| || |||||||| || ||||| | || ||| Sbjct: 456 catctagttctccacgggattgcacttgtccttggtgcggttggaatatatttcgccttc 515 Query: 313 aagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggcttggaata 372 || ||||| ||||| | ||| ||||| || | |||||| |||| |||||| |||| ||| Sbjct: 516 aaaaatcataatgagagtgggattgccaatctttacagtttgcactcttggattgggata 575 Query: 373 ggaacaatttctctatatggtattcagtggatatttggattcttgaccttcttcttcccc 432 || || ||| || | |||||||||||||||||| |||||||| | || ||||||||||| Sbjct: 576 gggacgattactttgtatggtattcagtggatagttggattcgttacattcttcttccct 635 Query: 433 aaggctgcgccaaatgtgaggaagggtgctcttccttgg 471 ||||||||||| |||| |||||||| |||||||||| Sbjct: 636 ggtgctgcgccaaacgtgaagaagggtgttcttccttgg 674
>ref|XM_473298.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 711 Score = 242 bits (122), Expect = 1e-60 Identities = 350/426 (82%) Strand = Plus / Plus Query: 7 gggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcc 66 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gggctgggcgtgaaggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcg 69 Query: 67 gccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgac 126 || | ||||||||| |||||||||| |||||| ||||||||||| ||||| || ||| Sbjct: 70 gcggtcatggtgctcgtctggtgcatcagcttccggggcggcctcgcgttcgaggcggac 129 Query: 127 aacaagaacctcatcttcaacgttcatcctgttcttatgttgattggctttattattctt 186 |||||||||||||||||||||||||| |||||||||||| ||||||| | ||||| || Sbjct: 130 aacaagaacctcatcttcaacgttcaccctgttcttatgctgattgggtacattatcctc 189 Query: 187 ggcagtgaagctataatggtatacaaggtacttcctacggtgaaccatgatacaactaag 246 ||||||||||| |||||| | |||||| || | || | ||||||| || ||||| ||| Sbjct: 190 ggcagtgaagccataatgatctacaagatattcccaaaactgaaccacgacacaaccaag 249 Query: 247 ttgatccatctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgt 306 ||||||| || | ||||| || || || |||| || || || |||||||| ||||| Sbjct: 250 ctgatccacctgattctccacgcgatcgccattgttcttggcgccgtcgggatctactgc 309 Query: 307 gctttcaagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggctt 366 || |||||| ||||| || | || || || ||| | ||||| |||||||| ||||| Sbjct: 310 gccttcaagttccacaacgagagcgggatcgccaacctctacagcctgcattcctggctc 369 Query: 367 ggaataggaacaatttctctatatggtattcagtggatatttggattcttgaccttcttc 426 || || |||||||| || || || || ||||||||||||||||||||| || | |||||| Sbjct: 370 ggcatcggaacaatctcgctgtacggcattcagtggatatttggattcgtggcgttcttc 429 Query: 427 ttcccc 432 | |||| Sbjct: 430 tacccc 435 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 532 ctggagaagctcaccttcctccaaagctcaggcatcgacaa 572 ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 535 ctggagaagctgaccttcctccagagctccggcctcgacaa 575
>dbj|AK069219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012J01, full insert sequence Length = 1046 Score = 242 bits (122), Expect = 1e-60 Identities = 350/426 (82%) Strand = Plus / Plus Query: 7 gggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcc 66 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gggctgggcgtgaaggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcg 252 Query: 67 gccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgac 126 || | ||||||||| |||||||||| |||||| ||||||||||| ||||| || ||| Sbjct: 253 gcggtcatggtgctcgtctggtgcatcagcttccggggcggcctcgcgttcgaggcggac 312 Query: 127 aacaagaacctcatcttcaacgttcatcctgttcttatgttgattggctttattattctt 186 |||||||||||||||||||||||||| |||||||||||| ||||||| | ||||| || Sbjct: 313 aacaagaacctcatcttcaacgttcaccctgttcttatgctgattgggtacattatcctc 372 Query: 187 ggcagtgaagctataatggtatacaaggtacttcctacggtgaaccatgatacaactaag 246 ||||||||||| |||||| | |||||| || | || | ||||||| || ||||| ||| Sbjct: 373 ggcagtgaagccataatgatctacaagatattcccaaaactgaaccacgacacaaccaag 432 Query: 247 ttgatccatctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgt 306 ||||||| || | ||||| || || || |||| || || || |||||||| ||||| Sbjct: 433 ctgatccacctgattctccacgcgatcgccattgttcttggcgccgtcgggatctactgc 492 Query: 307 gctttcaagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggctt 366 || |||||| ||||| || | || || || ||| | ||||| |||||||| ||||| Sbjct: 493 gccttcaagttccacaacgagagcgggatcgccaacctctacagcctgcattcctggctc 552 Query: 367 ggaataggaacaatttctctatatggtattcagtggatatttggattcttgaccttcttc 426 || || |||||||| || || || || ||||||||||||||||||||| || | |||||| Sbjct: 553 ggcatcggaacaatctcgctgtacggcattcagtggatatttggattcgtggcgttcttc 612 Query: 427 ttcccc 432 | |||| Sbjct: 613 tacccc 618 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 532 ctggagaagctcaccttcctccaaagctcaggcatcgacaa 572 ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 718 ctggagaagctgaccttcctccagagctccggcctcgacaa 758
>dbj|AK061426.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G12, full insert sequence Length = 1078 Score = 242 bits (122), Expect = 1e-60 Identities = 350/426 (82%) Strand = Plus / Plus Query: 7 gggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcc 66 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 gggctgggcgtgaaggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcg 250 Query: 67 gccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgac 126 || | ||||||||| |||||||||| |||||| ||||||||||| ||||| || ||| Sbjct: 251 gcggtcatggtgctcgtctggtgcatcagcttccggggcggcctcgcgttcgaggcggac 310 Query: 127 aacaagaacctcatcttcaacgttcatcctgttcttatgttgattggctttattattctt 186 |||||||||||||||||||||||||| |||||||||||| ||||||| | ||||| || Sbjct: 311 aacaagaacctcatcttcaacgttcaccctgttcttatgctgattgggtacattatcctc 370 Query: 187 ggcagtgaagctataatggtatacaaggtacttcctacggtgaaccatgatacaactaag 246 ||||||||||| |||||| | |||||| || | || | ||||||| || ||||| ||| Sbjct: 371 ggcagtgaagccataatgatctacaagatattcccaaaactgaaccacgacacaaccaag 430 Query: 247 ttgatccatctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgt 306 ||||||| || | ||||| || || || |||| || || || |||||||| ||||| Sbjct: 431 ctgatccacctgattctccacgcgatcgccattgttcttggcgccgtcgggatctactgc 490 Query: 307 gctttcaagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggctt 366 || |||||| ||||| || | || || || ||| | ||||| |||||||| ||||| Sbjct: 491 gccttcaagttccacaacgagagcgggatcgccaacctctacagcctgcattcctggctc 550 Query: 367 ggaataggaacaatttctctatatggtattcagtggatatttggattcttgaccttcttc 426 || || |||||||| || || || || ||||||||||||||||||||| || | |||||| Sbjct: 551 ggcatcggaacaatctcgctgtacggcattcagtggatatttggattcgtggcgttcttc 610 Query: 427 ttcccc 432 | |||| Sbjct: 611 tacccc 616 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 532 ctggagaagctcaccttcctccaaagctcaggcatcgacaa 572 ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 716 ctggagaagctgaccttcctccagagctccggcctcgacaa 756
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 232 bits (117), Expect = 1e-57 Identities = 141/149 (94%) Strand = Plus / Minus Query: 1 gcgatggggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtg 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25818420 gcgatggggctcggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtg 25818361 Query: 61 gcggccgccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaa 120 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 25818360 gcggccgccaccatggtgctggtctggtgcatccacttccgcggcggcctcgccttcgag 25818301 Query: 121 gccgacaacaagaacctcatcttcaacgt 149 ||| ||||||||||||||||||||||| Sbjct: 25818300 gccacaaacaagaacctcatcttcaacgt 25818272 Score = 200 bits (101), Expect = 4e-48 Identities = 179/205 (87%) Strand = Plus / Minus Query: 195 agctataatggtatacaaggtacttcctacggtgaaccatgatacaactaagttgatcca 254 ||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||| Sbjct: 25817029 agctataatggtatacaaggtccttcctacttggaagcatgatacaactaagctgatcca 25816970 Query: 255 tctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaa 314 |||| | |||||||| ||||| ||||| |||||||||| ||||||||||| |||||||| Sbjct: 25816969 tctaattctccatgcaattgcccttgtattcggtgcggttgggatatactgcgctttcaa 25816910 Query: 315 gaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggcttggaatagg 374 ||||||||||| ||||||||| ||| | ||||||||||||||||||||||| || || Sbjct: 25816909 atttcacaatgaaagtggaattgccaacctctacagtctgcattcttggcttgggattgg 25816850 Query: 375 aacaatttctctatatggtattcag 399 |||||||| | | |||||||||||| Sbjct: 25816849 aacaatttgtttgtatggtattcag 25816825 Score = 139 bits (70), Expect = 1e-29 Identities = 136/158 (86%) Strand = Plus / Minus Query: 421 ttcttcttccccaaggctgcgccaaatgtgaggaagggtgctcttccttggcacgtactt 480 |||||||||||| ||| |||||| ||||||||||||| |||||||||||| |||| Sbjct: 25816316 ttcttcttcccccgtgcttcgccaagcgtgaggaagggtgttcttccttggcatatactg 25816257 Query: 481 cttggaatcttcgtttacattttagccctggcaacggcagaacttgggtttctggagaag 540 |||| ||||||| ||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 25816256 tttgggctcttcgtctacattttagccctggccaccgcagaactcggatttcttgagaag 25816197 Query: 541 ctcaccttcctccaaagctcaggcatcgacaaatatgg 578 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 25816196 ctcactttcctccaaagctcagggctcgacaaatatgg 25816159 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 gttcatcctgttcttatgttgattggctttattattcttggcagtgaag 196 ||||| |||||||||||| | ||||||| ||| || || |||||||||| Sbjct: 25817156 gttcaccctgttcttatgcttattggctatataatcctaggcagtgaag 25817108
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 232 bits (117), Expect = 1e-57 Identities = 141/149 (94%) Strand = Plus / Minus Query: 1 gcgatggggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtg 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65026 gcgatggggctcggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtg 64967 Query: 61 gcggccgccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaa 120 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64966 gcggccgccaccatggtgctggtctggtgcatccacttccgcggcggcctcgccttcgag 64907 Query: 121 gccgacaacaagaacctcatcttcaacgt 149 ||| ||||||||||||||||||||||| Sbjct: 64906 gccacaaacaagaacctcatcttcaacgt 64878 Score = 200 bits (101), Expect = 4e-48 Identities = 179/205 (87%) Strand = Plus / Minus Query: 195 agctataatggtatacaaggtacttcctacggtgaaccatgatacaactaagttgatcca 254 ||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||| Sbjct: 63635 agctataatggtatacaaggtccttcctacttggaagcatgatacaactaagctgatcca 63576 Query: 255 tctagtactccatgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaa 314 |||| | |||||||| ||||| ||||| |||||||||| ||||||||||| |||||||| Sbjct: 63575 tctaattctccatgcaattgcccttgtattcggtgcggttgggatatactgcgctttcaa 63516 Query: 315 gaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggcttggaatagg 374 ||||||||||| ||||||||| ||| | ||||||||||||||||||||||| || || Sbjct: 63515 atttcacaatgaaagtggaattgccaacctctacagtctgcattcttggcttgggattgg 63456 Query: 375 aacaatttctctatatggtattcag 399 |||||||| | | |||||||||||| Sbjct: 63455 aacaatttgtttgtatggtattcag 63431 Score = 139 bits (70), Expect = 1e-29 Identities = 136/158 (86%) Strand = Plus / Minus Query: 421 ttcttcttccccaaggctgcgccaaatgtgaggaagggtgctcttccttggcacgtactt 480 |||||||||||| ||| |||||| ||||||||||||| |||||||||||| |||| Sbjct: 62922 ttcttcttcccccgtgcttcgccaagcgtgaggaagggtgttcttccttggcatatactg 62863 Query: 481 cttggaatcttcgtttacattttagccctggcaacggcagaacttgggtttctggagaag 540 |||| ||||||| ||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 62862 tttgggctcttcgtctacattttagccctggccaccgcagaactcggatttcttgagaag 62803 Query: 541 ctcaccttcctccaaagctcaggcatcgacaaatatgg 578 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 62802 ctcactttcctccaaagctcagggctcgacaaatatgg 62765 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 gttcatcctgttcttatgttgattggctttattattcttggcagtgaag 196 ||||| |||||||||||| | ||||||| ||| || || |||||||||| Sbjct: 63762 gttcaccctgttcttatgcttattggctatataatcctaggcagtgaag 63714
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 180 bits (91), Expect = 3e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 7 gggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcc 66 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89465 gggctgggcgtgaaggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcg 89406 Query: 67 gccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgac 126 || | ||||||||| |||||||||| |||||| ||||||||||| ||||| || ||| Sbjct: 89405 gcggtcatggtgctcgtctggtgcatcagcttccggggcggcctcgcgttcgaggcggac 89346 Query: 127 aacaagaacctcatcttcaacgt 149 ||||||||||||||||||||||| Sbjct: 89345 aacaagaacctcatcttcaacgt 89323 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 ctggagaagctcaccttcctccaaagctcaggcatcgacaa 572 ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 87700 ctggagaagctgaccttcctccagagctccggcctcgacaa 87660 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 gttcatcctgttcttatgttgattggctttattattcttggcagtgaag 196 ||||| |||||||||||| ||||||| | ||||| || |||||||||| Sbjct: 88283 gttcaccctgttcttatgctgattgggtacattatcctcggcagtgaag 88235 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 397 cagtggatatttggattcttgaccttcttcttcccc 432 |||||||||||||||||| || | ||||||| |||| Sbjct: 87835 cagtggatatttggattcgtggcgttcttctacccc 87800
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 180 bits (91), Expect = 3e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 7 gggctgggcgtgagggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcc 66 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26649907 gggctgggcgtgaaggcggcgccgttcacgtacgtggcgcacgcgctggccgtggcggcg 26649848 Query: 67 gccgccatggtgctgtactggtgcatccacttccgcggcggcctcgccttcgaagccgac 126 || | ||||||||| |||||||||| |||||| ||||||||||| ||||| || ||| Sbjct: 26649847 gcggtcatggtgctcgtctggtgcatcagcttccggggcggcctcgcgttcgaggcggac 26649788 Query: 127 aacaagaacctcatcttcaacgt 149 ||||||||||||||||||||||| Sbjct: 26649787 aacaagaacctcatcttcaacgt 26649765 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 ctggagaagctcaccttcctccaaagctcaggcatcgacaa 572 ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 26648142 ctggagaagctgaccttcctccagagctccggcctcgacaa 26648102 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 gttcatcctgttcttatgttgattggctttattattcttggcagtgaag 196 ||||| |||||||||||| ||||||| | ||||| || |||||||||| Sbjct: 26648725 gttcaccctgttcttatgctgattgggtacattatcctcggcagtgaag 26648677 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 gtggcgcacgcgctggccgtggcggccgc 68 ||||||||||||||||| |||||||||| Sbjct: 26354080 gtggcgcacgcgctggcgctggcggccgc 26354108 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 397 cagtggatatttggattcttgaccttcttcttcccc 432 |||||||||||||||||| || | ||||||| |||| Sbjct: 26648277 cagtggatatttggattcgtggcgttcttctacccc 26648242
>dbj|AK062638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-D05, full insert sequence Length = 553 Score = 139 bits (70), Expect = 1e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 421 ttcttcttccccaaggctgcgccaaatgtgaggaagggtgctcttccttggcacgtactt 480 |||||||||||| ||| |||||| ||||||||||||| |||||||||||| |||| Sbjct: 27 ttcttcttcccccgtgcttcgccaagcgtgaggaagggtgttcttccttggcatatactg 86 Query: 481 cttggaatcttcgtttacattttagccctggcaacggcagaacttgggtttctggagaag 540 |||| ||||||| ||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 87 tttgggctcttcgtctacattttagccctggccaccgcagaactcggatttcttgagaag 146 Query: 541 ctcaccttcctccaaagctcaggcatcgacaaatatgg 578 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 147 ctcactttcctccaaagctcagggctcgacaaatatgg 184
>gb|AY110878.1| Zea mays CL16535_1 mRNA sequence Length = 1068 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 92 tccacttccgcggcggcctcgccttcgaagccgacaacaagaacctcatcttcaacgttc 151 |||||||||||||||||||||| |||| || | ||||||||||||||||||||||||| Sbjct: 285 tccacttccgcggcggcctcgcgctcgaggcacagaacaagaacctcatcttcaacgttc 344 Query: 152 atcctgttcttatgttgattggctttattattcttggcagtgaagctataatggtataca 211 |||||||||||||| |||| |||| ||||| || ||||||||||| || ||| | |||| Sbjct: 345 atcctgttcttatgctgatcggctacattatcctcggcagtgaagccattatgatctaca 404 Query: 212 aggt 215 |||| Sbjct: 405 aggt 408
>ref|NM_197235.1| Oryza sativa (japonica cultivar-group) putative cytochrome b-561 (OSJNBb0073N24.15), mRNA Length = 693 Score = 79.8 bits (40), Expect = 9e-12 Identities = 136/168 (80%) Strand = Plus / Plus Query: 265 catgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaat 324 ||||||||||| ||| |||| ||| | || || ||||| ||| |||||| ||||||| Sbjct: 250 catgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaat 309 Query: 325 gaaactggaattgcgaacttgtacagtctgcattcttggcttggaataggaacaatttct 384 |||| ||||||||| ||| | ||||| ||||| || ||| ||||| | ||||| || | | Sbjct: 310 gaaagtggaattgctaacctctacagcctgcactcctgggttggacttggaactatctgt 369 Query: 385 ctatatggtattcagtggatatttggattcttgaccttcttcttcccc 432 |||||||| | |||||||||||||| ||| | ||||||||||||||| Sbjct: 370 ttatatggtgtacagtggatatttggcttcgtcaccttcttcttcccc 417 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 126 caacaagaacctcatcttcaacgttcatcctgttcttatgttgattggctttattattct 185 ||||||| |||||||||||||||||||||||| |||||| |||| || || || ||||| Sbjct: 114 caacaagggcctcatcttcaacgttcatcctgtgcttatgctgatcgggttcatcattct 173 Query: 186 tggcagtgaagctataatgg 205 || |||||||| ||||||| Sbjct: 174 aggaagtgaagccataatgg 193 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 526 gggtttctggagaagctcaccttcct 551 ||||| |||||||||||||||||||| Sbjct: 511 gggttcctggagaagctcaccttcct 536
>dbj|AK111107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A03, full insert sequence Length = 946 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 265 catgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaat 324 ||||||||||| ||| |||| ||| | || || ||||| ||| |||||| ||||||| Sbjct: 329 catgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaat 388 Query: 325 gaaactggaattgcgaacttgtacagtctgcattcttggcttggaataggaacaatttct 384 |||| ||||||||| ||| | ||||| ||||| || ||| ||||| | ||||| || | | Sbjct: 389 gaaagtggaattgctaacctctacagcctgcactcctgggttggacttggaactatctgt 448 Query: 385 ctatatggtattcagtggatatttggattcttgaccttcttcttcccc 432 |||||||| | ||||| |||||||| ||| | ||||||||||||||| Sbjct: 449 ttatatggtgtacagtgaatatttggcttcgtcaccttcttcttcccc 496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 126 caacaagaacctcatcttcaacgttcatcctgttcttatgttgattggctttattattct 185 ||||||| |||||||||||||||||||||||| |||||| |||| || || || ||||| Sbjct: 193 caacaagggcctcatcttcaacgttcatcctgtgcttatgctgatcgggttcatcattct 252 Query: 186 tggcagtgaagctataatgg 205 || |||||||| ||||||| Sbjct: 253 aggaagtgaagccataatgg 272 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 526 gggtttctggagaagctcaccttcct 551 ||||| |||||||||||||||||||| Sbjct: 590 gggttcctggagaagctcaccttcct 615
>dbj|AB205222.1| Citrullus lanatus CLb561A mRNA for cytochrome b561, complete cds Length = 968 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 130 aagaacctcatcttcaacgttcatcctgttcttatg 165 ||||| |||||||||||| ||||||||||||||||| Sbjct: 230 aagaatctcatcttcaacattcatcctgttcttatg 265
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 310 ttcaagaatcacaatgaaactggaattgcgaacttgtacagtctgcattcttggcttgga 369 ||||||||||| ||||||| ||| ||||| || ||||||| ||||||| ||||||||| Sbjct: 97454 ttcaagaatcataatgaaagtgggattgccaatctgtacagcttgcattcatggcttgga 97513 Query: 370 at 371 || Sbjct: 97514 at 97515 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 522 acttgggtttctggagaagctcaccttcct 551 |||||||||||| ||||||||||| ||||| Sbjct: 98354 acttgggtttctagagaagctcacattcct 98383 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 ttcatcctgttcttatgttgattggctt 176 ||||||||||||||||| | |||||||| Sbjct: 97183 ttcatcctgttcttatgcttattggctt 97210
>dbj|AB205223.1| Citrullus lanatus CLb561B mRNA for cytochrome b561, complete cds Length = 908 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 138 catcttcaacgttcatcctgttcttatgttgattggctttattattctt 186 ||||||||| || ||||||||||||||| ||||||| ||||| ||||| Sbjct: 141 catcttcaatgtccatcctgttcttatggtgattggacttattcttctt 189
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 397 cagtggatatttggattcttgaccttcttcttcccc 432 |||||||||||||| ||| | ||||||||||||||| Sbjct: 34822 cagtggatatttggcttcgtcaccttcttcttcccc 34787 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 526 gggtttctggagaagctcaccttcct 551 ||||| |||||||||||||||||||| Sbjct: 34693 gggttcctggagaagctcaccttcct 34668 Score = 42.1 bits (21), Expect = 2.0 Identities = 84/105 (80%) Strand = Plus / Minus Query: 265 catgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaat 324 ||||||||||| ||| |||| ||| | || || ||||| ||| |||||| ||||||| Sbjct: 35680 catgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaat 35621 Query: 325 gaaactggaattgcgaacttgtacagtctgcattcttggcttgga 369 |||| ||||||||| ||| | ||||| ||||| || ||| ||||| Sbjct: 35620 gaaagtggaattgctaacctctacagcctgcactcctgggttgga 35576
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 397 cagtggatatttggattcttgaccttcttcttcccc 432 |||||||||||||| ||| | ||||||||||||||| Sbjct: 100680 cagtggatatttggcttcgtcaccttcttcttcccc 100645 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 526 gggtttctggagaagctcaccttcct 551 ||||| |||||||||||||||||||| Sbjct: 100551 gggttcctggagaagctcaccttcct 100526 Score = 42.1 bits (21), Expect = 2.0 Identities = 84/105 (80%) Strand = Plus / Minus Query: 265 catgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaat 324 ||||||||||| ||| |||| ||| | || || ||||| ||| |||||| ||||||| Sbjct: 101538 catgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaat 101479 Query: 325 gaaactggaattgcgaacttgtacagtctgcattcttggcttgga 369 |||| ||||||||| ||| | ||||| ||||| || ||| ||||| Sbjct: 101478 gaaagtggaattgctaacctctacagcctgcactcctgggttgga 101434
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 397 cagtggatatttggattcttgaccttcttcttcccc 432 |||||||||||||| ||| | ||||||||||||||| Sbjct: 18739402 cagtggatatttggcttcgtcaccttcttcttcccc 18739367 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 526 gggtttctggagaagctcaccttcct 551 ||||| |||||||||||||||||||| Sbjct: 18739273 gggttcctggagaagctcaccttcct 18739248 Score = 42.1 bits (21), Expect = 2.0 Identities = 84/105 (80%) Strand = Plus / Minus Query: 265 catgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaat 324 ||||||||||| ||| |||| ||| | || || ||||| ||| |||||| ||||||| Sbjct: 18740260 catgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaat 18740201 Query: 325 gaaactggaattgcgaacttgtacagtctgcattcttggcttgga 369 |||| ||||||||| ||| | ||||| ||||| || ||| ||||| Sbjct: 18740200 gaaagtggaattgctaacctctacagcctgcactcctgggttgga 18740156
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 397 cagtggatatttggattcttgaccttcttcttcccc 432 |||||||||||||| ||| | ||||||||||||||| Sbjct: 18750255 cagtggatatttggcttcgtcaccttcttcttcccc 18750220 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 526 gggtttctggagaagctcaccttcct 551 ||||| |||||||||||||||||||| Sbjct: 18750126 gggttcctggagaagctcaccttcct 18750101 Score = 42.1 bits (21), Expect = 2.0 Identities = 84/105 (80%) Strand = Plus / Minus Query: 265 catgctattgcgcttgtgctcggtgcggtcgggatatactgtgctttcaagaatcacaat 324 ||||||||||| ||| |||| ||| | || || ||||| ||| |||||| ||||||| Sbjct: 18751113 catgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaat 18751054 Query: 325 gaaactggaattgcgaacttgtacagtctgcattcttggcttgga 369 |||| ||||||||| ||| | ||||| ||||| || ||| ||||| Sbjct: 18751053 gaaagtggaattgctaacctctacagcctgcactcctgggttgga 18751009
>ref|XM_308684.2| Anopheles gambiae str. PEST ENSANGP00000023085 (ENSANGG00000018996), partial mRNA Length = 1770 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 tcatcttcaacgttcatcctgttctta 163 |||||||| |||||||||||||||||| Sbjct: 1277 tcatcttctacgttcatcctgttctta 1303
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 gctggccgtggcggccgccgcc 72 |||||||||||||||||||||| Sbjct: 89738 gctggccgtggcggccgccgcc 89717
>emb|BX957335.12| Zebrafish DNA sequence from clone CH211-119A10 in linkage group 11, complete sequence Length = 168444 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 50710 ggtgcatccacttacgcggcggcctc 50735 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 50328 ggtgcatccacttacgcggcggcctc 50303
>emb|BX936405.7| Zebrafish DNA sequence from clone CH211-155J8 in linkage group 3, complete sequence Length = 134507 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 79300 ggtgcatccacttacgcggcggcctc 79325
>emb|CR361547.8| Zebrafish DNA sequence from clone CH211-22K7 in linkage group 4 Contains three novel genes and six CpG islands, complete sequence Length = 168908 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 64776 ggtgcatccacttacgcggcggcctc 64801
>emb|BX293567.21| Zebrafish DNA sequence from clone DKEYP-7A3, complete sequence Length = 82645 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 65727 ggtgcatccacttacgcggcggcctc 65702
>emb|BX005392.12| Zebrafish DNA sequence from clone DKEY-117J14 in linkage group 24, complete sequence Length = 178765 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 152309 ggtgcatccacttacgcggcggcctc 152334
>emb|AL935142.8| Zebrafish DNA sequence from clone CH211-227M23, complete sequence Length = 160780 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 ggtgcatccacttccgcggcggcctc 111 ||||||||||||| |||||||||||| Sbjct: 5309 ggtgcatccacttacgcggcggcctc 5284
>ref|NM_103970.2| Arabidopsis thaliana unknown protein AT1G50900 mRNA, complete cds Length = 784 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cttcttcttccccaaggctgc 440 ||||||||||||||||||||| Sbjct: 131 cttcttcttccccaaggctgc 151
>ref|XM_473251.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 gtggcgcacgcgctggccgtggcggccgc 68 ||||||||||||||||| |||||||||| Sbjct: 208 gtggcgcacgcgctggcgctggcggccgc 236
>gb|AC119951.12| Mus musculus chromosome 9, clone RP24-448C4, complete sequence Length = 215131 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 gaggaagggtgctcttccttg 470 ||||||||||||||||||||| Sbjct: 52444 gaggaagggtgctcttccttg 52464
>ref|NM_001014957.1| Bos taurus pyrroline-5-carboxylate reductase family, member 2 (PYCR2), mRNA Length = 1698 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 caccttcctccaaagctcagg 563 ||||||||||||||||||||| Sbjct: 1325 caccttcctccaaagctcagg 1345
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 42 ggcgcacgcgctggccgtggcggccgccg 70 ||||||||||| ||||||||||| ||||| Sbjct: 2557174 ggcgcacgcgcaggccgtggcggacgccg 2557146
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tccgcggcggcctcgccttcg 118 ||||||||||||||||||||| Sbjct: 607976 tccgcggcggcctcgccttcg 607996
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 gtggcgcacgcgctggccgtggcggccgc 68 ||||||||||||||||| |||||||||| Sbjct: 130657 gtggcgcacgcgctggcgctggcggccgc 130685
>gb|AY114573.1| Arabidopsis thaliana unknown protein (At1g50910) mRNA, complete cds Length = 624 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cttcttcttccccaaggctgc 440 ||||||||||||||||||||| Sbjct: 65 cttcttcttccccaaggctgc 85
>gb|AY072348.1| Arabidopsis thaliana unknown protein (At1g50910) mRNA, complete cds Length = 681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cttcttcttccccaaggctgc 440 ||||||||||||||||||||| Sbjct: 90 cttcttcttccccaaggctgc 110
>emb|BX818673.1|CNS0AAWR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL91ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 699 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cttcttcttccccaaggctgc 440 ||||||||||||||||||||| Sbjct: 103 cttcttcttccccaaggctgc 123
>gb|AC079284.4|AC079284 Arabidopsis thaliana chromosome 1 BAC F8A12 genomic sequence, complete sequence Length = 105445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cttcttcttccccaaggctgc 440 ||||||||||||||||||||| Sbjct: 55542 cttcttcttccccaaggctgc 55562
>gb|AF228766.1|AF228766 Pseudomonas fluorescens strain LS107d2 ECF sigma factor PrtI (prtI) gene, partial cds; transmembrane regulator PrtR (prtR) gene, complete cds; and hypothetical pseudogene, complete sequence Length = 1329 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 gccgccgccatggtgctgtac 84 ||||||||||||||||||||| Sbjct: 787 gccgccgccatggtgctgtac 807
>gb|AY085852.1| Arabidopsis thaliana clone 19056 mRNA, complete sequence Length = 723 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cttcttcttccccaaggctgc 440 ||||||||||||||||||||| Sbjct: 131 cttcttcttccccaaggctgc 151
>gb|AC134563.5| Mus musculus BAC clone RP24-179M18 from chromosome 19, complete sequence Length = 163878 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gacaacaagaacctcatcttc 144 ||||||||||||||||||||| Sbjct: 123380 gacaacaagaacctcatcttc 123360
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ctggccgtggcggccgccgcc 72 ||||||||||||||||||||| Sbjct: 1661196 ctggccgtggcggccgccgcc 1661176 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 gctggccgtggcggccgccgccatggtg 78 ||||| |||||||||||||||| ||||| Sbjct: 5885624 gctgggcgtggcggccgccgccgtggtg 5885597
>gb|AC156160.4| Monodelphis domestica, clone XX-23H4, complete sequence Length = 143400 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 ttgaccttcttcttccccaaggctg 439 |||||||||| |||||||||||||| Sbjct: 76702 ttgaccttctccttccccaaggctg 76678
>dbj|AB113568.1| Actinoplanes sp. A40644 mevalonate pathway genes and BE-40644 biosynthetic genes, complete cds Length = 22478 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 cgcgctggccgtggcggccgccgcc 72 ||||||||||||||||| ||||||| Sbjct: 2844 cgcgctggccgtggcgggcgccgcc 2868
>gb|BT021513.1| Bos taurus pyrroline-5-carboxylate reductase 1 (PYCR1), mRNA, complete cds Length = 1698 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 caccttcctccaaagctcagg 563 ||||||||||||||||||||| Sbjct: 1325 caccttcctccaaagctcagg 1345
>dbj|AK108116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C05, full insert sequence Length = 912 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 gtggcgcacgcgctggccgtggcggccgc 68 ||||||||||||||||| |||||||||| Sbjct: 274 gtggcgcacgcgctggcgctggcggccgc 302
>gb|AY147798.1| Culex tritaeniorhynchus acetylcholinesterase 2 mRNA, partial cds Length = 810 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gggcggcgccgttcacgtacg 40 ||||||||||||||||||||| Sbjct: 649 gggcggcgccgttcacgtacg 629
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 acgcgctggccgtggcggccgccgc 71 |||||||||||| |||||||||||| Sbjct: 4687876 acgcgctggccgcggcggccgccgc 4687852
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtggcgcacgcgctggccg 58 |||||||||||||||||||| Sbjct: 5872 cgtggcgcacgcgctggccg 5853
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccacttccgcggcggcctcg 112 |||||||||||||||||||| Sbjct: 1048172 ccacttccgcggcggcctcg 1048153
>ref|NM_193851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 cggcgccgttcacgtacgtggcgc 46 |||||||||||||| ||||||||| Sbjct: 26 cggcgccgttcacgaacgtggcgc 49
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cgtggcggccgccgccatgg 76 |||||||||||||||||||| Sbjct: 837408 cgtggcggccgccgccatgg 837389
>gb|AY453367.1| Uncultured bacterium clone C65 dissimilatory membrane-bound nitrate reductase (narG) gene, partial cds Length = 663 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtacgtggcgcacgcgctggccg 58 ||||||||||| |||||||||||| Sbjct: 329 cgtacgtggcgaacgcgctggccg 352
>gb|AY453362.1| Uncultured bacterium clone C57 dissimilatory membrane-bound nitrate reductase (narG) gene, partial cds Length = 662 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtacgtggcgcacgcgctggccg 58 ||||||||||| |||||||||||| Sbjct: 329 cgtacgtggcgaacgcgctggccg 352
>gb|AY453359.1| Uncultured bacterium clone C52 dissimilatory membrane-bound nitrate reductase (narG) gene, partial cds Length = 662 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtacgtggcgcacgcgctggccg 58 ||||||||||| |||||||||||| Sbjct: 329 cgtacgtggcgaacgcgctggccg 352
>gb|AC124027.2| Mus musculus chromosome X clone RP21-282L18 map qA7.2, complete sequence Length = 147432 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttggattcttgaccttctt 425 |||||||||||||||||||| Sbjct: 134644 tttggattcttgaccttctt 134663
>gb|AC124026.2| Mus musculus chromosome X clone RP21-564N13 map qA7.2, complete sequence Length = 178239 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttggattcttgaccttctt 425 |||||||||||||||||||| Sbjct: 108016 tttggattcttgaccttctt 108035
>gb|AC124022.2| Mus musculus chromosome X clone RP21-566N22 map qA7.2, complete sequence Length = 163107 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttggattcttgaccttctt 425 |||||||||||||||||||| Sbjct: 9837 tttggattcttgaccttctt 9856
>gb|AC124021.2| Mus musculus chromosome X clone RP21-566N22 map qA7.2, complete sequence Length = 152943 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttggattcttgaccttctt 425 |||||||||||||||||||| Sbjct: 3996 tttggattcttgaccttctt 4015
>gb|AC124020.2| Mus musculus chromosome X clone RP21-564N13 map qA7.2, complete sequence Length = 155466 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttggattcttgaccttctt 425 |||||||||||||||||||| Sbjct: 100072 tttggattcttgaccttctt 100091
>gb|AY514485.1| Avian infectious bronchitis virus strain Cal99, complete genome Length = 27693 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacgtacttcttggaatctt 491 |||||||||||||||||||| Sbjct: 12511 cacgtacttcttggaatctt 12492
>ref|XM_650427.1| Entamoeba histolytica HM-1:IMSS Pten 3-phosphoinositide phosphatase (27.t00028) partial mRNA Length = 1308 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cttcttggaatcttcgttta 497 |||||||||||||||||||| Sbjct: 55 cttcttggaatcttcgttta 36
>gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, complete sequence Length = 154836 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atcacaatgaaactggaatt 336 |||||||||||||||||||| Sbjct: 152015 atcacaatgaaactggaatt 152034
>emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 in linkage group 14, complete sequence Length = 156128 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 tgcatccacttccgcggcggcctc 111 ||||||||||| |||||||||||| Sbjct: 4975 tgcatccacttacgcggcggcctc 4998
>gb|AC150250.1| Uncultured bacterium zdt-25h12 clone zdt-25h12, complete sequence Length = 41495 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ggctgggcgtgagggcggcg 27 |||||||||||||||||||| Sbjct: 27016 ggctgggcgtgagggcggcg 27035
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ggccgccgccatggtgctgt 82 |||||||||||||||||||| Sbjct: 1718184 ggccgccgccatggtgctgt 1718165
>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete sequence Length = 187418 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cttgtacagtctgcattctt 361 |||||||||||||||||||| Sbjct: 136834 cttgtacagtctgcattctt 136853
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 tggccgtggcggccgccgccatggtgct 80 |||||| |||||||| |||||||||||| Sbjct: 2848178 tggccgcggcggccggcgccatggtgct 2848151
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 cggcgccgttcacgtacgtggcgc 46 |||||||||||||| ||||||||| Sbjct: 15326470 cggcgccgttcacgaacgtggcgc 15326493
>gb|AY197568.1| Myxococcus xanthus isolate C257/780 hypothetical adventurous gliding motility protein M (agmM), hypothetical TPR-like protein, and adventurous gliding motility protein R (agmR) genes, complete cds Length = 4461 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ctggccgtggcggccgccgc 71 |||||||||||||||||||| Sbjct: 1098 ctggccgtggcggccgccgc 1079
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atcacaatgaaactggaatt 336 |||||||||||||||||||| Sbjct: 132559 atcacaatgaaactggaatt 132578
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ctggccgtggcggccgccgc 71 |||||||||||||||||||| Sbjct: 1598697 ctggccgtggcggccgccgc 1598716
>gb|AE004797.1| Pseudomonas aeruginosa PAO1, section 358 of 529 of the complete genome Length = 12378 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccacttccgcggcggcctcg 112 |||||||||||||||||||| Sbjct: 1976 ccacttccgcggcggcctcg 1995
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 tggccgtggcggccgccgccatggtgct 80 |||||| |||||||| |||||||||||| Sbjct: 91659 tggccgcggcggccggcgccatggtgct 91632
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 tggccgtggcggccgccgccatggtgct 80 |||||| |||||||| |||||||||||| Sbjct: 8324 tggccgcggcggccggcgccatggtgct 8297
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 cggcgccgttcacgtacgtggcgc 46 |||||||||||||| ||||||||| Sbjct: 4011 cggcgccgttcacgaacgtggcgc 4034
>dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1039D07 Length = 135301 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 cggcgccgttcacgtacgtggcgc 46 |||||||||||||| ||||||||| Sbjct: 67829 cggcgccgttcacgaacgtggcgc 67852
>dbj|AK108314.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-G07, full insert sequence Length = 821 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 cggcgccgttcacgtacgtggcgc 46 |||||||||||||| ||||||||| Sbjct: 112 cggcgccgttcacgaacgtggcgc 135
>gb|U30252.3| Synechococcus sp. PCC 7942 cosmids 7H1 and 2E8, complete sequence Length = 60090 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ggccgccgccatggtgctgt 82 |||||||||||||||||||| Sbjct: 10476 ggccgccgccatggtgctgt 10457
>gb|DQ083171.1| Phrynocephalus przewalskii microsatellite Phr72 sequence Length = 813 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 tcagtggatatttggattct 415 |||||||||||||||||||| Sbjct: 511 tcagtggatatttggattct 530
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cggccgccgccatggtgctg 81 |||||||||||||||||||| Sbjct: 4041975 cggccgccgccatggtgctg 4041956
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccgcggcggcctcgccttcg 118 |||||||||||||||||||| Sbjct: 6300428 ccgcggcggcctcgccttcg 6300447
>gb|AC126052.4| Mus musculus BAC clone RP23-277H6 from 7, complete sequence Length = 202833 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cttgtacagtctgcattctt 361 |||||||||||||||||||| Sbjct: 61604 cttgtacagtctgcattctt 61623
>emb|AL807822.7| Mouse DNA sequence from clone RP23-31A20 on chromosome X, complete sequence Length = 116719 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tgttgattggctttattatt 183 |||||||||||||||||||| Sbjct: 25746 tgttgattggctttattatt 25765
>emb|AL808110.7| Mouse DNA sequence from clone RP23-62O13 on chromosome X, complete sequence Length = 175963 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttggattcttgaccttctt 425 |||||||||||||||||||| Sbjct: 77959 tttggattcttgaccttctt 77978
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtggcgcacgcgctggccg 58 |||||||||||||||||||| Sbjct: 4209239 cgtggcgcacgcgctggccg 4209220
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ggccgccgccatggtgctgt 82 |||||||||||||||||||| Sbjct: 2598600 ggccgccgccatggtgctgt 2598619 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,346,105 Number of Sequences: 3902068 Number of extensions: 5346105 Number of successful extensions: 110217 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108976 Number of HSP's gapped (non-prelim): 1236 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
