Clone Name | basd2g18 |
---|---|
Clone Library Name | barley_pub |
>PPCKC_CHICK (P05153) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 208 QGDSKGHNPK*RQPQSSELVGCVMKSVAVCRGSRESGKLLLDL 80 QGD + P+ R+ S C +S+ +C GS E K +LD+ Sbjct: 17 QGDLESLPPQVREFIESNAKLCQPESIHICDGSEEENKKILDI 59
>DEOC_BDEBA (Q6MGR8) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 220 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -3 Query: 255 LQPVKGNLKAKVKLANKETVKVIIQNS 175 L V+ ++KA V+ AN TVKVII+ S Sbjct: 102 LDYVRDDIKAVVQAANGHTVKVIIETS 128
>TM16E_MOUSE (Q75UR0) Transmembrane protein 16E (Gnathodiaphyseal dysplasia 1| protein homolog) Length = 904 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Frame = +1 Query: 136 SSRTQQALKT-----VAVAILDYDLYCLLVRQLYFSLEVTFHWL*RVEIPRSIREPWSS 297 S T Q++K+ +A A+ L C+++ L F E W+ ++EIPR+ +E SS Sbjct: 488 SEATLQSVKSFFTPQLATALSGSCLNCIVILILNFFYEKISAWITKMEIPRTHQEYESS 546
>PAM17_CANGA (Q6FJJ0) Presequence translocated-associated motor subunit PAM17,| mitochondrial precursor Length = 186 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -3 Query: 243 KGNLKAKVKLANKETVKVIIQNSDSHSLQS 154 KGN A+ L NKE +K +IQN S QS Sbjct: 120 KGNKLAQYNLKNKEFLKHVIQNRVDASSQS 149
>COLA_CLOPE (P43153) Microbial collagenase precursor (EC 3.4.24.3) (120 kDa| collagenase) Length = 1104 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 246 VKGNLKAKVKLANKETVKVIIQNSD 172 VKGNLK +VK K+ +K + N+D Sbjct: 975 VKGNLKNEVKETAKDAIKEVENNND 999 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,429,130 Number of Sequences: 219361 Number of extensions: 695297 Number of successful extensions: 1421 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1421 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)