ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd2f24 |
|---|---|
| Clone Library Name | barley_pub |
>MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 1| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 667 Score = 88.2 bits (217), Expect = 2e-17 Identities = 46/65 (70%), Positives = 49/65 (75%), Gaps = 2/65 (3%) Frame = +2 Query: 452 AFEKNSRIASGYVGLRDVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625 A EK+ R A GY GLR+V E KDD QSFFLAETLKYLYLLFS SV+ DEWVFNT Sbjct: 581 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 640 Query: 626 EAHPL 640 EAHPL Sbjct: 641 EAHPL 645
>MA122_DROME (P53625) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 2| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 643 Score = 88.2 bits (217), Expect = 2e-17 Identities = 46/65 (70%), Positives = 49/65 (75%), Gaps = 2/65 (3%) Frame = +2 Query: 452 AFEKNSRIASGYVGLRDVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625 A EK+ R A GY GLR+V E KDD QSFFLAETLKYLYLLFS SV+ DEWVFNT Sbjct: 557 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 616 Query: 626 EAHPL 640 EAHPL Sbjct: 617 EAHPL 621
>MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IC) (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C member 1) (HMIC) Length = 630 Score = 81.6 bits (200), Expect = 2e-15 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 2/78 (2%) Frame = +2 Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSG--EKDDKMQSFFLAETLKYLYLLFSP 586 +PI E +V A EK R +G+ G++DV S D+K QSFFLAETLKYLYLLFS Sbjct: 538 NPIYREWGWEVVLALEKYCRTEAGFSGIQDVYSSTPNHDNKQQSFFLAETLKYLYLLFSE 597 Query: 587 PSVVSFDEWVFNTEAHPL 640 ++S ++WVFNTEAHPL Sbjct: 598 DDLLSLEDWVFNTEAHPL 615
>MA1A1_PIG (O02773) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 659 Score = 80.9 bits (198), Expect = 3e-15 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Frame = +2 Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDV--NSGEKDDKMQSFFLAETLKYLYLLFSP 586 DP + + EA EK+ R+ GY GLRDV ++ DD QSFFLAETLKYLYL+FS Sbjct: 567 DPKYRKWAWEAVEALEKHCRVNGGYSGLRDVYVSAQTYDDVQQSFFLAETLKYLYLIFSD 626 Query: 587 PSVVSFDEWVFNTEAHPL 640 ++ + W+FNTEAHPL Sbjct: 627 DDLLPLEHWIFNTEAHPL 644
>MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 77.4 bits (189), Expect = 3e-14 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 2/65 (3%) Frame = +2 Query: 452 AFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625 A EK+ R++ G+ G++DV + DD QSFFLAETLKYLYLLFS ++ D WVFNT Sbjct: 560 AIEKSCRVSGGFSGVKDVYAPTPVHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNT 619 Query: 626 EAHPL 640 EAHPL Sbjct: 620 EAHPL 624
>MA1A1_MOUSE (P45700) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 655 Score = 77.0 bits (188), Expect = 4e-14 Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Frame = +2 Query: 449 EAFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFN 622 EA E + R+ GY GLRDV + DD QSFFLAETLKYLYL+FS ++ + W+FN Sbjct: 575 EALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFN 634 Query: 623 TEAHP 637 TEAHP Sbjct: 635 TEAHP 639
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 77.0 bits (188), Expect = 4e-14 Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Frame = +2 Query: 452 AFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625 A EK R+ G+ G++DV S DD QSFFLAETLKYLYLLFS ++ D WVFNT Sbjct: 560 AIEKYCRVNGGFSGVKDVYSSTPTHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNT 619 Query: 626 EAHPL 640 EAHPL Sbjct: 620 EAHPL 624
>MA1A1_RABIT (P45701) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Fragment) Length = 469 Score = 72.8 bits (177), Expect = 8e-13 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Frame = +2 Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVN-SGEK-DDKMQSFFLAETLKYLYLLFSP 586 DP + + EA E + R+ GY GLRDV + EK D+ QSFFLAETLKYLYL+FS Sbjct: 377 DPKYRKWAWEAVEALESHCRVNGGYSGLRDVYFTHEKYDNVQQSFFLAETLKYLYLIFSD 436 Query: 587 PSVVSFDEWVFNTEAHPL 640 ++ + W+FNTEAH L Sbjct: 437 DDLLPLEHWIFNTEAHLL 454
>MA1A1_HUMAN (P33908) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 653 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Frame = +2 Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSP 586 DP + + EA E + R+ GY GLRDV + DD QSFFLAETLKYLYL+FS Sbjct: 561 DPKYRKWAWEAVEALENHCRVNGGYSGLRDVYLLHESYDDVQQSFFLAETLKYLYLIFSD 620 Query: 587 PSVVSFDEWVFNTEAHPL 640 ++ + W+FN+EAH L Sbjct: 621 DDLLPLEHWIFNSEAHLL 638
>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase) Length = 699 Score = 67.8 bits (164), Expect = 3e-11 Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 5/72 (6%) Frame = +2 Query: 440 KVKEAFEKNSRIASG-YVGLRDVNSGEKD---DKMQSFFLAETLKYLYLLFS-PPSVVSF 604 ++ ++F + +R+ SG Y + +V +K DKM+SFFL ETLKYL+LLFS P+++S Sbjct: 622 EILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSL 681 Query: 605 DEWVFNTEAHPL 640 D +VFNTEAHPL Sbjct: 682 DAYVFNTEAHPL 693
>EDEM3_HUMAN (Q9BZQ6) ER degradation-enhancing alpha-mannosidase-like 3| Length = 889 Score = 65.9 bits (159), Expect = 1e-10 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Frame = +2 Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPS 592 DP E + + E K +R+ G+ ++DV +G +D+M SFFLAE KYLYLLF+ Sbjct: 376 DPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKE 435 Query: 593 VVSFD--EWVFNTEAHPL 640 + FD +++F TEAH L Sbjct: 436 DIIFDIEDYIFTTEAHLL 453
>EDEM2_HUMAN (Q9BV94) ER degradation-enhancing alpha-mannosidase-like 2| precursor Length = 578 Score = 64.3 bits (155), Expect = 3e-10 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 19/95 (20%) Frame = +2 Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPS 592 DP E E+ EK S++ G+ ++D+ + D++M+SFFLAET+KYLYLLF P + Sbjct: 386 DPTLLELGRDAVESIEKISKVECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTN 445 Query: 593 VV-----SFDE--------------WVFNTEAHPL 640 + +FD ++FNTEAHP+ Sbjct: 446 FIHNNGSTFDAVITPYGECILGAGGYIFNTEAHPI 480
>YH04_YEAST (P38888) Protein YHR204W| Length = 796 Score = 57.0 bits (136), Expect = 5e-08 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Frame = +2 Query: 443 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 616 +K+ F+ N G+ G ++V +GE D+M++F L+ETLKYLYLLF + + S + + Sbjct: 437 LKQRFKSNC----GFAGFQNVITGELQDRMETFVLSETLKYLYLLFDEENELHNSASDVI 492 Query: 617 FNTEAHPL 640 F+TEAHP+ Sbjct: 493 FSTEAHPM 500
>EDEM1_MOUSE (Q925U4) ER degradation-enhancing alpha-mannosidase-like 1| Length = 652 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Frame = +2 Query: 443 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 616 + ++ EK +++ GY L V K+D+M+SFFL+ET KYLYLLF + V S ++ Sbjct: 512 ILQSLEKYTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYM 571 Query: 617 FNTEAH 634 F TE H Sbjct: 572 FTTEGH 577
>EDEM1_HUMAN (Q92611) ER degradation-enhancing alpha-mannosidase-like 1| Length = 657 Score = 53.5 bits (127), Expect = 5e-07 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = +2 Query: 443 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 616 + ++ EK +++ GY L V +D+M+SFFL+ET KYLYLLF + V S ++ Sbjct: 517 ILQSLEKYTKVKCGYATLHHVIDKSTEDRMESFFLSETCKYLYLLFDEDNPVHKSGTRYM 576 Query: 617 FNTEAH 634 F TE H Sbjct: 577 FTTEGH 582
>MNS1_CANAL (Q8J0Q0) Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC| 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 565 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%) Frame = +2 Query: 464 NSRIASGYVGLRDVNSGEKD------DKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625 NS + L DV S + + D +SF+ AETLKYLYLLF + + ++VFNT Sbjct: 442 NSEGEVSFSSLSDVTSFDSNGLPKFKDNTESFWWAETLKYLYLLFDDTNKIPLTDYVFNT 501 Query: 626 EAHP 637 EAHP Sbjct: 502 EAHP 505
>YKU1_SCHPO (Q9P7C3) Putative mannosyl-oligosaccharide 1,2-alpha-mannosidase| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 521 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = +2 Query: 515 EKDDKMQSFFLAETLKYLYLLFSPP-SVVSFDEWVFNTEAHP 637 ++ DK +SF+ AETLKYLYLLF S++ + FNTEAHP Sbjct: 467 DQRDKTESFWFAETLKYLYLLFEDDFSILPLTNYTFNTEAHP 508
>MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase) Length = 549 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 2/43 (4%) Frame = +2 Query: 515 EKDDKMQSFFLAETLKYLYLLFSPPSVVSFD--EWVFNTEAHP 637 +K + M+SF+LAETLKYLY+LF + FD + VFNTEAHP Sbjct: 491 KKSNNMESFWLAETLKYLYILF----LDEFDLTKVVFNTEAHP 529
>MAN12_PENCI (P31723) Mannosyl-oligosaccharide alpha-1,2-mannosidase precursor| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 511 Score = 45.1 bits (105), Expect = 2e-04 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Frame = +2 Query: 452 AFEKNSRIASGYVGLRDVNS---GEKDDKMQSFFLAETLKYLYLLFSPPSVVSFDE---- 610 A R SG+ + DVN G K D +SF AE +KY YL S + + Sbjct: 436 AINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKN 495 Query: 611 -WVFNTEAHPL 640 +V+NTEAHP+ Sbjct: 496 TFVYNTEAHPI 506
>KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)| Length = 1357 Score = 36.2 bits (82), Expect = 0.084 Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%) Frame = +2 Query: 275 LVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEID-PINNERREKVKE 451 ++SE E EIS L NE++ L KD VE NN+ REK E Sbjct: 1000 VISEREKEISGLWNELDSL---------------------KDAVEHQRKKNNDLREKNWE 1038 Query: 452 AFEKNSRIASGYVGLRD-VNSGEKDDKMQ----SFFLAETLKYLYLLFSPPSVVSFDEWV 616 A E +AS L+D VN K+ + Q E LK L+ S PS +S+ EW+ Sbjct: 1039 AME---ALASTEKMLQDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWL 1095 Query: 617 FNTE 628 E Sbjct: 1096 HGFE 1099
>KTN1_VULVU (O97961) Kinectin| Length = 1330 Score = 33.9 bits (76), Expect = 0.42 Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Frame = +2 Query: 275 LVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEA 454 ++SE E EI+ L+NE++ L A+ RK NN+ REK EA Sbjct: 1000 VISEREKEITGLQNELDSL-------------KEAVEHQRKK-------NNDLREKNWEA 1039 Query: 455 FEKNSRIASGYVGLRD-VNSGEKDDKMQ-----SFFLAETLKYLYLLFSPPSVVSFDEWV 616 E +AS L+D VN K ++ Q E LK L+ S P +++ EW+ Sbjct: 1040 ME---ALASTEKMLQDKVNKTSKVERQQYVEAIELEAKEVLKKLFPKVSVPPNLNYGEWL 1096 Query: 617 FNTEAHP 637 E P Sbjct: 1097 RGFEKKP 1103
>FLIDP_VIBPA (Q56705) Polar flagellar hook-associated protein 2 (HAP2) (Filament| cap protein) (Flagellar cap protein) Length = 670 Score = 33.5 bits (75), Expect = 0.55 Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Frame = +2 Query: 263 DRQSLVSEYESEISQ-LKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERRE 439 + + L+ + ++EI Q + +E +L ++ + +L E A I R ++DP ER E Sbjct: 353 EAKQLLEQEKAEIEQKIADEKQELDAKVERG--ELSEEQAKQIHR---AKLDPQERERLE 407 Query: 440 KVKEAFEKNSRIASG---YVGLRDVNSGEKDD 526 K+ EA K ++ S Y+G+ +V +G+ + Sbjct: 408 KIDEAEAKIAKAQSSFEEYLGMTEVQAGQDSE 439
>ASNA_MYCGA (Q7NAM0) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine| synthetase A) Length = 329 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/49 (30%), Positives = 30/49 (61%) Frame = +2 Query: 260 WDRQSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLV 406 WD + +SE + + LKN +N+++ L++A +++ E I +KDL+ Sbjct: 118 WDWELRISENDRNVEFLKNTVNKIYKVLKEAQLKVNEKYGI-FEQKDLL 165
>Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (ORF R8)| Length = 470 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Frame = +2 Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448 Q+ + E ++ + N+IN +L+ ++ E+N I KD +I+ + E+R+ VK Sbjct: 38 QNEIKRIEKQLKSINNDINIKENELKSLLLEDEKNL---ISSKD--KINKLKQEQRDLVK 92 Query: 449 EAFEKN---SRIASGYVGLRDVNSGEKDDK 529 + F++ S++ L+ + +KD K Sbjct: 93 KDFDQKQMISKLTKDLTNLKLESETKKDQK 122
>NOG1_YEAST (Q02892) Nucleolar GTP-binding protein 1| Length = 647 Score = 31.2 bits (69), Expect = 2.7 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%) Frame = +2 Query: 275 LVSEYESEI---SQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKV 445 L S E+++ S++ N +N++H +A ++ P I K+L + DP + RR+ Sbjct: 340 LASRIENKLKSQSRINNVLNKIHVAQPQARDDVKRTPFIPESVKNLKKYDPEDPNRRKLA 399 Query: 446 KEAFEKNSRIASGYVGLRDVNSGEK----DDKMQSFFLAETL--KYLYLLFSP 586 ++ +N G G+ +VN +K DD+ ++ + E L K +Y P Sbjct: 400 RDIEAEN-----GGAGVFNVNLKDKYLLEDDEWKNDIMPEILDGKNVYDFLDP 447
>YIO4_YEAST (P40460) Hypothetical 80.5 kDa protein in SLN1-RAD25 intergenic| region Length = 691 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +2 Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLV-EIDPIN 424 E EI L++ I++LH LRK GI E+ R+ L E+D IN Sbjct: 389 EEEIKALQSNISELHKILRKKGISTEQFELQNQEREKLTRELDKIN 434
>RAD50_HUMAN (Q92878) DNA repair protein RAD50 (EC 3.6.-.-) (hRAD50)| Length = 1312 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/64 (29%), Positives = 35/64 (54%) Frame = +2 Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448 + +V YE+E+ LKN + ++ L K ++L+ RK +E D N+E EK++ Sbjct: 238 KEIVKSYENELDPLKNRLKEIEHNLSKI-MKLDNEIKALDSRKKQMEKD--NSELEEKME 294 Query: 449 EAFE 460 + F+ Sbjct: 295 KVFQ 298
>NOG1_ASHGO (Q74ZK6) Nucleolar GTP-binding protein 1| Length = 642 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/79 (26%), Positives = 38/79 (48%) Frame = +2 Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469 ++ I+ + N+I+ H Q R G+ E P I K++ + DP + ERR ++ +N Sbjct: 351 QTRITNVLNKIHVAHPQKRDDGV--ERTPYIPEAFKNVKKYDPEDPERRPLARDIEAENG 408 Query: 470 RIASGYVGLRDVNSGEKDD 526 + L+D E D+ Sbjct: 409 GAGVFNINLKDSYLLENDE 427
>YM74_YEAST (Q05024) Hypothetical 26.5 kDa protein in FUS2-RNH1 intergenic| region Length = 226 Score = 30.8 bits (68), Expect = 3.5 Identities = 24/91 (26%), Positives = 44/91 (48%) Frame = +2 Query: 266 RQSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKV 445 R++L Y + + IN+L L + G ++ENP + IP+ DL+ D + R +K Sbjct: 29 RKALQILYSVNLDSQRKLINELI--LERFG-DIQENPRVLIPKNDLISRDQELSLRLQKE 85 Query: 446 KEAFEKNSRIASGYVGLRDVNSGEKDDKMQS 538 +E +++R G + +K+D S Sbjct: 86 EERPLRSTRKRKGKSESKSKRKKKKNDSPDS 116
>RAD50_MOUSE (P70388) DNA repair protein RAD50 (EC 3.6.-.-) (mRad50)| Length = 1312 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = +2 Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448 Q +V YE E+ LKN + ++ L K ++L+ RK +E D N+E +K++ Sbjct: 238 QEIVRSYEDELEPLKNRLKEIEHNLSKI-MKLDNEIKALESRKKQMEKD--NSELEQKME 294 Query: 449 EAFE 460 + F+ Sbjct: 295 KVFQ 298
>Y1383_METJA (Q58778) Hypothetical protein MJ1383 precursor| Length = 256 Score = 30.4 bits (67), Expect = 4.6 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Frame = +2 Query: 278 VSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGI-PRKDLVEIDPINNERREKVKEA 454 + +E+ + +L IN+L + +K G+ L +G+ PR EID E +K+K Sbjct: 39 IKVWEAHVEKLL--INELE-RAKKVGLNLFI--CVGMHPRAIPPEID----EALDKIKSY 89 Query: 455 FEKNSRIAS-GYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSP 586 NSR+ G +GL EK+ ++ LAE L ++ +P Sbjct: 90 INYNSRVVGIGEIGLEKATKEEKEVFIKQLLLAEELNMPAVVHTP 134
>PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog| Length = 501 Score = 30.0 bits (66), Expect = 6.0 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Frame = +2 Query: 260 WDRQSLVSEYESEISQLKNEINQL----HGQLRKAGIQLEENPAIGIPRKDLVEIDPINN 427 W R+ + E ++ K E+N+L G+L++ G EE G P +D ++ P Sbjct: 12 WVRRGVAKETPDKVELSKEEVNRLIAEAKGKLQEEGGSEEEE--AGNPSEDGMQSGPTQA 69 Query: 428 ERREKVKEAFEKNSRI-----ASGYVGLRDVNSGEKDDKMQSFFLAETL 559 RE +++ ++ R +GY D+++ +++D + + E+L Sbjct: 70 PPRESLEDGDPQDDRTLDDDELAGY----DLDNYDEEDNPDAETIGESL 114
>Y577_METJA (Q57997) Protein MJ0577| Length = 162 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 5/50 (10%) Frame = +2 Query: 278 VSEYESEIS-----QLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEI 412 V E+E+E+ + KN++ + +L G ++++ +GIP +++V+I Sbjct: 66 VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKI 115
>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1281 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/82 (21%), Positives = 38/82 (46%) Frame = +2 Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469 + E+ LK +++L L ++EE + G ++K+ E+N+ Sbjct: 322 QQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS-------------YQLKQLEEQNA 368 Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535 R+ V +RD++S EK + ++ Sbjct: 369 RLKDALVRMRDLSSSEKQEHVK 390
>TEA1_SCHPO (P87061) Tip elongation aberrant protein 1 (Cell polarity protein| tea1) Length = 1147 Score = 29.6 bits (65), Expect = 7.9 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +2 Query: 314 NEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDP-INNERREKVKEAFEKNSRIASGYV 490 NEI LH Q+R +LE+ R+ L+ I + R +++EA EK S + Sbjct: 881 NEIELLHDQIRITNAKLEK-------REKLINASKYIEDTLRSEIQEAAEKVSNLEFSNF 933 Query: 491 GLRDVNS 511 L++ NS Sbjct: 934 NLKEENS 940
>CGAT1_HUMAN (Q8TDX6) Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1| (EC 2.4.1.174) (beta4GalNAcT-1) Length = 532 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = +2 Query: 260 WDRQ--SLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPR 394 W+ Q + VS + +I+QLK E+ + QLR Q + +G+ R Sbjct: 64 WEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDR 110
>NOG1_CANGA (Q6FRV0) Nucleolar GTP-binding protein 1| Length = 645 Score = 29.6 bits (65), Expect = 7.9 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 9/113 (7%) Frame = +2 Query: 275 LVSEYESEI---SQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKV 445 L S E+++ +++ N +N++H +A +E P I K L + DP + ERR Sbjct: 340 LASRIENKLKSQARITNVLNKIHVAKPQARDDVERTPYIPEEFKKLKKYDPEDPERRLLA 399 Query: 446 KEAFEKNSRIASGYVGLRDVNSGEK----DDKMQSFFLAETL--KYLYLLFSP 586 ++ +N G G+ ++N +K DD+ ++ + E + K +Y P Sbjct: 400 RDIEAEN-----GGAGVFNINLKDKYILDDDEWKNDIMPEIMDGKNVYDFLDP 447
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) (p135) Length = 1278 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/82 (21%), Positives = 38/82 (46%) Frame = +2 Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469 + E+ LK +++L L ++EE + G ++K+ E+N+ Sbjct: 322 QQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS-------------YQLKQLEEQNA 368 Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535 R+ V +RD++S EK + ++ Sbjct: 369 RLKDALVRMRDLSSSEKQEHVK 390
>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1280 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/82 (21%), Positives = 38/82 (46%) Frame = +2 Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469 + E+ LK +++L L ++EE + G ++K+ E+N+ Sbjct: 321 QQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS-------------YQLKQLEEQNA 367 Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535 R+ V +RD++S EK + ++ Sbjct: 368 RLKDALVRMRDLSSSEKQEHVK 389
>DYNA_XENLA (Q6PCJ1) Dynactin-1| Length = 1232 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/82 (23%), Positives = 40/82 (48%) Frame = +2 Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469 E L+ E++ L ++ + I LE I + ++ E +VK+ E+N+ Sbjct: 273 EERAESLQQEVDTLKDKVEEHKIDLE------ILKHEIEEKGSDGAASSYQVKQLEEQNA 326 Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535 R+ V +RD+++ EK + ++ Sbjct: 327 RLKEALVRMRDLSASEKQEHIK 348
>RAD50_RAT (Q9JIL8) DNA repair protein RAD50 (EC 3.6.-.-)| Length = 1312 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/64 (28%), Positives = 35/64 (54%) Frame = +2 Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448 + +V YE+E+ LKN + ++ L K ++L+ RK +E D N+E +K++ Sbjct: 238 REIVKAYENELEPLKNRLKEIEHNLSKI-MRLDNEIKALDSRKKQMEKD--NSELEQKME 294 Query: 449 EAFE 460 + F+ Sbjct: 295 KVFQ 298
>FGL2_HUMAN (Q14314) Fibroleukin precursor (Fibrinogen-like protein 2) (pT49)| Length = 439 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +2 Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGI 358 +S V++ SE+ K EIN LHG+L K + Sbjct: 134 ESEVNKLSSELKNAKEEINVLHGRLEKLNL 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,148,035 Number of Sequences: 219361 Number of extensions: 972801 Number of successful extensions: 3412 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3399 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
