>ref|XM_470194.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1869

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  aagaaaggacgggttttaactagggcgtcaaccatgatcctgttcaagctgnctcttagc 454
            ||||| |||||| ||  ||| ||||| || ||||| | ||||||||||||| |  |||  
Sbjct: 1715 aagaatggacggcttcgaacaagggcatccaccataaccctgttcaagctgcccgttact 1656

                                                                 
Query: 455  ccgagccatcgcagtcttgggaacaatggtttcttaaaccaccgcatcgcaag 507
            || |||||||||| |||||||||  |||||||||| |||||||| || |||||
Sbjct: 1655 cctagccatcgcaatcttgggaaatatggtttcttgaaccaccggattgcaag 1603



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  taaagatccagcagctgcaag 550
            |||||||||||||||||||||
Sbjct: 1580 taaagatccagcagctgcaag 1560

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                           
Query: 395     aagaaaggacgggttttaactagggcgtcaaccatgatcctgttcaagctgnctcttagc 454
               ||||| |||||| ||  ||| ||||| || ||||| | ||||||||||||| |  |||  
Sbjct: 1937806 aagaatggacggcttcgaacaagggcatccaccataaccctgttcaagctgcccgttact 1937865

                                                                    
Query: 455     ccgagccatcgcagtcttgggaacaatggtttcttaaaccaccgcatcgcaag 507
               || |||||||||| |||||||||  |||||||||| |||||||| || |||||
Sbjct: 1937866 cctagccatcgcaatcttgggaaatatggtttcttgaaccaccggattgcaag 1937918



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 530     taaagatccagcagctgcaag 550
               |||||||||||||||||||||
Sbjct: 1937941 taaagatccagcagctgcaag 1937961

>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                         
Query: 395   aagaaaggacgggttttaactagggcgtcaaccatgatcctgttcaagctgnctcttagc 454
             ||||| |||||| ||  ||| ||||| || ||||| | ||||||||||||| |  |||  
Sbjct: 37605 aagaatggacggcttcgaacaagggcatccaccataaccctgttcaagctgcccgttact 37546

                                                                  
Query: 455   ccgagccatcgcagtcttgggaacaatggtttcttaaaccaccgcatcgcaag 507
             || |||||||||| |||||||||  |||||||||| |||||||| || |||||
Sbjct: 37545 cctagccatcgcaatcttgggaaatatggtttcttgaaccaccggattgcaag 37493



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 530   taaagatccagcagctgcaag 550
             |||||||||||||||||||||
Sbjct: 37470 taaagatccagcagctgcaag 37450

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                           
Query: 395     aagaaaggacgggttttaactagggcgtcaaccatgatcctgttcaagctgnctcttagc 454
               ||||| |||||| ||  ||| ||||| || ||||| | ||||||||||||| |  |||  
Sbjct: 1937804 aagaatggacggcttcgaacaagggcatccaccataaccctgttcaagctgcccgttact 1937863

                                                                    
Query: 455     ccgagccatcgcagtcttgggaacaatggtttcttaaaccaccgcatcgcaag 507
               || |||||||||| |||||||||  |||||||||| |||||||| || |||||
Sbjct: 1937864 cctagccatcgcaatcttgggaaatatggtttcttgaaccaccggattgcaag 1937916



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 530     taaagatccagcagctgcaag 550
               |||||||||||||||||||||
Sbjct: 1937939 taaagatccagcagctgcaag 1937959

>dbj|AK100737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118C14, full
            insert sequence
          Length = 2292

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  aagaaaggacgggttttaactagggcgtcaaccatgatcctgttcaagctgnctcttagc 454
            ||||| |||||| ||  ||| ||||| || ||||| | ||||||||||||| |  |||  
Sbjct: 1796 aagaatggacggcttcgaacaagggcatccaccataaccctgttcaagctgcccgttact 1737

                                                                 
Query: 455  ccgagccatcgcagtcttgggaacaatggtttcttaaaccaccgcatcgcaag 507
            || |||||||||| |||||||||  |||||||||| |||||||| || |||||
Sbjct: 1736 cctagccatcgcaatcttgggaaatatggtttcttgaaccaccggattgcaag 1684



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  taaagatccagcagctgcaag 550
            |||||||||||||||||||||
Sbjct: 1661 taaagatccagcagctgcaag 1641

>emb|AL136379.19| Human DNA sequence from clone RP5-881P19 on chromosome 1q42.11-42.3
             Contains the WNT3A gene for wingless-type MMTV integration
             site family member 3A protein, a novel protein, the ARF1
             gene for ADP-ribosylation factor 1 protein, a C1orf35 gene
             for chromosome 1 open reading frame 35, the MRPL55 gene
             for  mitochondrial ribosomal protein L55, a novel
             processed pseudogene and six CpG islands, complete
             sequence
          Length = 127816

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 79    gccacatgcacacggaacaggcacat 104
             ||||||||||||||| ||||||||||
Sbjct: 89222 gccacatgcacacggcacaggcacat 89247

>gb|AC004916.2|AC004916 Homo sapiens PAC clone RP5-891L14 from 7p22, complete sequence
          Length = 129014

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 79    gccacatgcacacggaacaggcacat 104
             ||||||||||||||| ||||||||||
Sbjct: 24421 gccacatgcacacggcacaggcacat 24446

>gb|AY107148.1| Zea mays PCO064822 mRNA sequence
          Length = 684

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 531 aaagatccagcagctgcaaggt 552
           ||||||||||||||||||||||
Sbjct: 641 aaagatccagcagctgcaaggt 662

>emb|AL138816.12| Human DNA sequence from clone RP11-235O20 on chromosome 13 Contains the
             3' end of the gene for a novel protein similar to heparan
             sulfate 6-sulfotransferase, complete sequence
          Length = 142420

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   ggaaatgtaacagcaagaaaa 127
             |||||||||||||||||||||
Sbjct: 12955 ggaaatgtaacagcaagaaaa 12975

>gb|AC104763.12| Homo sapiens chromosome 17, clone RP11-3K24, complete sequence
          Length = 163418

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 193   tggggcaagcaaacatggctcacagcagc 221
             |||||||||||| |||||||||| |||||
Sbjct: 41467 tggggcaagcaagcatggctcactgcagc 41495

>gb|AC073911.38| Homo sapiens 12 BAC RP11-386I8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 144266

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 201    gcaaacatggctcacagcagc 221
              |||||||||||||||||||||
Sbjct: 101836 gcaaacatggctcacagcagc 101856

>emb|AL603926.6| Human DNA sequence from clone RP11-356L9 on chromosome 22, complete
              sequence
          Length = 180455

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 201    gcaaacatggctcacagcagc 221
              |||||||||||||||||||||
Sbjct: 115834 gcaaacatggctcacagcagc 115854

>dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2589O24, complete
             sequence
          Length = 64281

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 461   catcgcagtcttgggaacaatggtt 485
             |||| ||||||||||||||||||||
Sbjct: 25215 catctcagtcttgggaacaatggtt 25239

>ref|XM_864554.1| PREDICTED: Bos taurus similar to Zinc finger and BTB domain
            containing protein 4 (KAISO-like zinc finger protein 1)
            (KAISO-L1) (LOC613607), mRNA
          Length = 2593

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  gtccccagctcctcgccgcc 381
            ||||||||||||||||||||
Sbjct: 1967 gtccccagctcctcgccgcc 1986

>ref|XM_748044.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu1g17710)
           partial mRNA
          Length = 1290

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 532 aagatccagcagctgcaagg 551
           ||||||||||||||||||||
Sbjct: 963 aagatccagcagctgcaagg 944

>gb|AC145879.2| Pan troglodytes BAC clone RP43-20K4 from 7, complete sequence
          Length = 151392

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gaaatgtaacagcaagaaaa 127
             ||||||||||||||||||||
Sbjct: 80892 gaaatgtaacagcaagaaaa 80873

>gb|AC093461.4| Homo sapiens BAC clone RP11-764P14 from 7, complete sequence
          Length = 37408

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gaaatgtaacagcaagaaaa 127
             ||||||||||||||||||||
Sbjct: 13544 gaaatgtaacagcaagaaaa 13525

>emb|AL365338.17| Human DNA sequence from clone RP11-123N4 on chromosome 9 Contain the 3'
             end of the gene for rab6 GTPase activating protein (GAP
             and centrosome-associated) (GAPCENA), a pseudogene similar
             to part of thyroid receptor interacting protein 15
             (TRIP15), the 3' end of the STRBP gene for spermatid
             perinuclear RNA binding protein (FLJ11307), a novel gene
             (GL012) and a CpG island, complete sequence
          Length = 150230

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   gtccaactgccagggctcaa 302
             ||||||||||||||||||||
Sbjct: 34756 gtccaactgccagggctcaa 34775

>emb|AL161772.17| Human DNA sequence from clone RP11-172H24 on chromosome 13 Contains the
             3' end of the gene for polycystic kidney disease,
             autosomal recessive (Probe hTg737) (TG737), a novel
             pseudogene (FLJ124251 and FLJ14793), the 5' end of the
             IL17D gene for interleukin 17D and a CpG island, complete
             sequence
          Length = 125579

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   caaacatggctcacagcagc 221
             ||||||||||||||||||||
Sbjct: 53625 caaacatggctcacagcagc 53606

>emb|BX571813.8| Zebrafish DNA sequence from clone DKEY-14O6 in linkage group 3, complete
              sequence
          Length = 233901

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    acaagagaccaacacaagat 168
              ||||||||||||||||||||
Sbjct: 231838 acaagagaccaacacaagat 231819

>gb|AC123024.12| Homo sapiens 12 BAC RP11-264E13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 82875

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    atgatgtaacaacaaatgtttgcc 81
             ||||| ||||||||||||||||||
Sbjct: 43025 atgatttaacaacaaatgtttgcc 43002

>gb|AC123025.5| Homo sapiens 12 BAC RP11-642J16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 89119

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    atgatgtaacaacaaatgtttgcc 81
             ||||| ||||||||||||||||||
Sbjct: 51269 atgatttaacaacaaatgtttgcc 51246

>gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, complete sequence
          Length = 198146

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    caaacatggctcacagcagc 221
              ||||||||||||||||||||
Sbjct: 104842 caaacatggctcacagcagc 104823

>gb|AC020907.6| Homo sapiens chromosome 19 clone CTD-2527I21, complete sequence
          Length = 169891

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   caaacatggctcacagcagc 221
             ||||||||||||||||||||
Sbjct: 40530 caaacatggctcacagcagc 40549

>gb|AC104827.4| Homo sapiens BAC clone RP11-778J15 from 4, complete sequence
          Length = 157262

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   gcaaacatggctcacagcag 220
             ||||||||||||||||||||
Sbjct: 67022 gcaaacatggctcacagcag 67003

>gb|AC079807.5| Homo sapiens BAC clone RP11-760G15 from 2, complete sequence
          Length = 156175

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  caaacatggctcacagcagc 221
            ||||||||||||||||||||
Sbjct: 6931 caaacatggctcacagcagc 6912

>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14,
             complete sequence
          Length = 157355

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   acaagagaccaacacaagat 168
             ||||||||||||||||||||
Sbjct: 79283 acaagagaccaacacaagat 79264

>gb|AC007172.6|AC007172 Homo sapiens chromosome 9, clone hRPK.538_E_7, complete sequence
          Length = 168535

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    gtccaactgccagggctcaa 302
              ||||||||||||||||||||
Sbjct: 122131 gtccaactgccagggctcaa 122112


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,041,881
Number of Sequences: 3902068
Number of extensions: 4041881
Number of successful extensions: 72734
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72642
Number of HSP's gapped (non-prelim): 92
length of query: 552
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 529
effective length of database: 17,143,297,704
effective search space: 9068804485416
effective search space used: 9068804485416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)