ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25 28 5.8
2PARP2_HUMAN (Q9UGN5) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30... 28 7.6

>PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25|
          Length = 672

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
 Frame = +3

Query: 33  CMVMHKHT*YICVYELNLYLGTNS--------EINTCSSTRSEGAAHVFCLNSQVC 176
           C     +  YIC Y  N   G+NS        ++ TC ST ++ A+   C N   C
Sbjct: 90  CQYASTYNNYICCYSTNTQCGSNSSPQVSASGQVVTC-STNTQCASGYTCNNGACC 144



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>PARP2_HUMAN (Q9UGN5) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2)|
           (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose]
           synthetase 2) (pADPRT-2) (hPARP-2)
          Length = 583

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 126 TRSEGAAHVFCLNSQVCDMLLGMHKTSFNSVK 221
           T   G AHV+C  + V D++L      FN+ K
Sbjct: 99  TAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNK 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,993,952
Number of Sequences: 219361
Number of extensions: 656302
Number of successful extensions: 1263
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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