Clone Name | basd2h20 |
---|---|
Clone Library Name | barley_pub |
>YF69_SCHPO (O13929) Hypothetical protein C23C4.09c in chromosome I| Length = 131 Score = 89.0 bits (219), Expect = 6e-18 Identities = 51/124 (41%), Positives = 70/124 (56%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERL 298 D EL+AIRQ R+ ++ + G+ A +L+QIL AR+RL Sbjct: 2 DEELQAIRQARLAQLQAEHGSAPSNIASGPSSNQQQQEVQDEMRQNLLSQILEHPARDRL 61 Query: 299 SRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRRRN 478 RIALV+ D+A VE++LLR A+TG IS K+SE LI LLE+I+ SK+ + I R Sbjct: 62 RRIALVRKDRAEAVEELLLRMAKTGQISHKISEPELIELLEKISGEVSKRNETKIVINRR 121 Query: 479 VLDD 490 V DD Sbjct: 122 VQDD 125
>PDCD5_HUMAN (O14737) Programmed cell death protein 5 (TFAR19 protein) (TF-1| cell apoptosis-related gene 19 protein) Length = 124 Score = 83.2 bits (204), Expect = 4e-16 Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAP---SQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEAR 289 D ELEA+R++R+ E+ + G P +QQ A +LAQ+L AR Sbjct: 2 DEELEALRRQRLAELQAKHGDPGDAAQQEAKHREAEMRNS---------ILAQVLDQSAR 52 Query: 290 ERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQR 469 RLS +ALVKP+K + VE+ L++ A+ G +SEKVSE+ LI +L++++ T K T V R Sbjct: 53 ARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKTTTVKFNR 112 Query: 470 RR 475 R+ Sbjct: 113 RK 114
>PDCD5_MOUSE (P56812) Programmed cell death protein 5 (TFAR19 protein) (TF-1| cell apoptosis-related gene 19 protein) Length = 125 Score = 82.8 bits (203), Expect = 5e-16 Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAP---SQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEAR 289 D ELEA+R++R+ E+ + G P +QQ A +LAQ+L AR Sbjct: 2 DEELEALRKQRLAELQAKHGDPGDAAQQEAKQREAEMRNS---------ILAQVLDQSAR 52 Query: 290 ERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQR 469 RLS +ALVKP+K + VE+ L++ A+ G +S KVSE+ LI +LE+++ T K+T V R Sbjct: 53 ARLSNLALVKPEKTKAVENYLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFNR 112 Query: 470 RR 475 R+ Sbjct: 113 RK 114
>Y1619_METKA (Q8TUY2) DNA-binding protein MK1619| Length = 117 Score = 73.2 bits (178), Expect = 4e-13 Identities = 42/118 (35%), Positives = 68/118 (57%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERL 298 DPELE IR++++ E+ QR Q M L +IL+ EARERL Sbjct: 3 DPELERIRRKKIMEL--QRKLEESQEKKVEEEREKKALEEAQRRAM-LRRILTPEARERL 59 Query: 299 SRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 +R+ L +P A+ VE+ LL+ AQTG + EK+ E++L +L+Q++ T K+ ++ +R+ Sbjct: 60 ARVRLARPQLAQAVENYLLQLAQTGQLKEKIDEDQLKRILKQVSDATRKEYRIRFKRK 117
>YRGK_CAEEL (Q93408) Hypothetical protein D2005.3 in chromosome I| Length = 130 Score = 67.4 bits (163), Expect = 2e-11 Identities = 33/77 (42%), Positives = 52/77 (67%) Frame = +2 Query: 257 MLAQILSSEARERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTH 436 M++QIL A +RLS +A+ KP+KA+ VE L+ A+ G +S K++++ L +L+E+++ Sbjct: 47 MISQILDQAAMQRLSNLAVAKPEKAQMVEAALINMARRGQLSGKMTDDGLKALMERVSAQ 106 Query: 437 TSKQTKVTIQRRRNVLD 487 T K T V RRRN LD Sbjct: 107 TQKATSVKFDRRRNELD 123
>Y204_PICTO (Q6L2L3) DNA-binding protein PTO0204| Length = 113 Score = 62.8 bits (151), Expect = 5e-10 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 3/123 (2%) Frame = +2 Query: 113 DHDPELEAIRQRRM---QEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSE 283 D D EL+ IR+R+M Q +M +R +Q +L QILS E Sbjct: 2 DRDDELDEIRRRKMAEYQNMMQERAYEEEQKKAAAEEEARRQ--------QILRQILSPE 53 Query: 284 ARERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTI 463 ARERLSR+ LV+PD VE+ L++ A G I++ +S+ L S+L ++ T + + I Sbjct: 54 ARERLSRLKLVRPDLVENVENQLIQLAGMGRINKVISDNELKSILLRL---TENRHETRI 110 Query: 464 QRR 472 +RR Sbjct: 111 ERR 113
>Y1087_PYRFU (Q8U1W7) DNA-binding protein PF1087| Length = 112 Score = 62.0 bits (149), Expect = 8e-10 Identities = 37/111 (33%), Positives = 63/111 (56%) Frame = +2 Query: 125 ELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERLSR 304 ++E IR+R++ E+ Q+ QQ A +L +IL+ EARERL+R Sbjct: 4 DIEEIRRRKLMEL--QKKYLEQQKAQEEAERQQALIEAQIQA--ILRRILTPEARERLAR 59 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKV 457 + LVKP+ AR VE +L++ Q G I+EK+ + ++ +L QI T ++ ++ Sbjct: 60 VKLVKPELARQVELILVQLYQAGQITEKIDDAKMKKILAQIEARTRREFRI 110
>Y1060_PYRHO (O58787) DNA-binding protein PH1060| Length = 115 Score = 61.2 bits (147), Expect = 1e-09 Identities = 38/117 (32%), Positives = 65/117 (55%) Frame = +2 Query: 107 MADHDPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEA 286 M + ++E IR+R++ E+ QR QQ A +L +IL+ EA Sbjct: 1 MREMAEDIEEIRRRKLMEL--QRKYLEQQKAQEEAERQQALIEAQIQA--ILRKILTPEA 56 Query: 287 RERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKV 457 RERL+R+ LV+P+ AR VE +L++ Q G I+E++ + +L +L QI T ++ ++ Sbjct: 57 RERLARVKLVRPELARQVELILVQLYQAGQITERIDDAKLKRILAQIEAKTRREFRI 113
>Y925_PYRAB (P56813) DNA-binding protein PYRAB09250| Length = 115 Score = 60.8 bits (146), Expect = 2e-09 Identities = 37/111 (33%), Positives = 63/111 (56%) Frame = +2 Query: 125 ELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERLSR 304 ++E IR+R++ E+ QR QQ A +L +IL+ EARERL+R Sbjct: 7 DIEEIRRRKLLEL--QRKYLEQQKAQEEEARQQALIEAQIQA--ILRKILTPEARERLAR 62 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKV 457 + LV+P+ AR VE +L++ Q G I+E++ + +L +L QI T ++ ++ Sbjct: 63 VRLVRPELARQVELILVQLYQAGQITERIDDAKLKKILAQIEARTRREFRI 113
>YMW4_YEAST (Q04773) Hypothetical 16.0 kDa protein in ABF2-CHL12 intergenic| region Length = 145 Score = 60.5 bits (145), Expect = 2e-09 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAPS-QQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARER 295 DPEL+AIR+ R+ ++ G + +N+G +A L +A ER Sbjct: 2 DPELQAIREARLAQLKNNSGGTNGDRNSGANNGGGENSAPVGAA----IANFLEPQALER 57 Query: 296 LSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQ--TKVTIQR 469 LSR+ALV+ D+A+ VE L + T ++ K++E ++S+L I + Q +K+ +R Sbjct: 58 LSRVALVRRDRAQAVETYLKKLIATNNVTHKITEAEIVSILNGIAKQQNSQNNSKIIFER 117 Query: 470 R 472 + Sbjct: 118 K 118
>Y1374_SULTO (Q971I0) DNA-binding protein ST1374| Length = 118 Score = 60.1 bits (144), Expect = 3e-09 Identities = 38/120 (31%), Positives = 62/120 (51%) Frame = +2 Query: 113 DHDPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARE 292 ++D EL+ + +R+ E QR A +Q +L IL+ EAR+ Sbjct: 7 EYDAELDELLRRKALE--QQRKALEEQQRKAELEAKKDA---------ILRVILTPEARQ 55 Query: 293 RLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 RL+ + LVKP+ A +E+ L+ AQ+G I +++E L +L Q+ T K K+TI+ R Sbjct: 56 RLANVKLVKPELAEAIENQLIALAQSGRIQAPITDEELKEILAQLTNQTRKDYKITIRER 115
>Y008_THEVO (Q97CU3) DNA-binding protein TV0008| Length = 115 Score = 58.2 bits (139), Expect = 1e-08 Identities = 41/118 (34%), Positives = 62/118 (52%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERL 298 D ELE IR+R+M+E+ QR A +Q A +L QIL ARERL Sbjct: 4 DEELEKIRRRQMEEL--QRQAMQRQMA---EEEEKQREIEKARRQQILRQILDPSARERL 58 Query: 299 SRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 + + LV+PD A VE+ L++ A G I+ + E +I +L ++ T + + I+RR Sbjct: 59 NNVRLVRPDLADNVENQLIQLASMGRINRIIKESDIIDILSKL---TENKREPKIERR 113
>Y1278_PYRKO (Q5JGN3) DNA-binding protein TK1278| Length = 112 Score = 58.2 bits (139), Expect = 1e-08 Identities = 37/111 (33%), Positives = 60/111 (54%) Frame = +2 Query: 125 ELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERLSR 304 ++E IR+R++ E+ Q+ QQ A M +IL+ EARERL R Sbjct: 4 DIEEIRKRKLMEL--QKKYLEQQKAQEEALKREMELEAQLEAIMR--KILTPEARERLGR 59 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKV 457 + LVKP+ AR VE +L++ Q G I E++ + +L +L +I+ T + K+ Sbjct: 60 VKLVKPELARQVELLLVQLYQAGQIRERIDDAKLKRILAEIDARTRRDFKI 110
>Y4116_METAC (Q8TIN0) DNA-binding protein MA4116| Length = 122 Score = 56.6 bits (135), Expect = 4e-08 Identities = 36/121 (29%), Positives = 61/121 (50%) Frame = +2 Query: 107 MADHDPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEA 286 M++ D ELE IR+RR+ EI Q+ + +L QIL+ EA Sbjct: 4 MSNMDDELEEIRKRRLAEIQRQQAQQQPSDVQAAYQQEQARAEMEAQKQAILRQILTPEA 63 Query: 287 RERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQ 466 RERL+ + + +P +E L+ AQ+G + ++ +E+L +LL ++ K+ K +I Sbjct: 64 RERLTTLKMSRPALGEQLEMQLISLAQSGRLKAQIDDEQLKTLLMRMQ---PKKRKTSIT 120 Query: 467 R 469 R Sbjct: 121 R 121
>Y352_SULSO (Q980F8) DNA-binding protein SSO0352| Length = 118 Score = 55.8 bits (133), Expect = 6e-08 Identities = 29/72 (40%), Positives = 46/72 (63%) Frame = +2 Query: 257 MLAQILSSEARERLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTH 436 +L IL+ EAR+RL+ I LVKP+ A +E+ L+ AQ+G I +++E L +LEQI+ Sbjct: 44 ILRVILTPEARQRLTNIKLVKPEFAESLENQLIALAQSGRIKIPITDEELKQILEQISQQ 103 Query: 437 TSKQTKVTIQRR 472 + K+ I+ R Sbjct: 104 NRRDFKIQIRER 115
>Y052_THEAC (Q9HM19) DNA-binding protein Ta0052| Length = 115 Score = 55.8 bits (133), Expect = 6e-08 Identities = 39/120 (32%), Positives = 62/120 (51%) Frame = +2 Query: 113 DHDPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARE 292 D D ELE IR+++++ + QR A +Q +L QIL ARE Sbjct: 2 DDDEELERIRRQQLESM--QRQAMQEQ---MREEQEKQREAERARRQQILRQILDPSARE 56 Query: 293 RLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 RL+ + LV+PD A VE+ L++ A G I+ +SE +I +L ++ T + + I+RR Sbjct: 57 RLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKL---TENKREPKIERR 113
>Y691_METJA (Q58103) DNA-binding protein MJ0691| Length = 109 Score = 54.7 bits (130), Expect = 1e-07 Identities = 34/116 (29%), Positives = 61/116 (52%) Frame = +2 Query: 125 ELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERLSR 304 ++E I+++++ E+ + QQ +L +IL+ EARERL R Sbjct: 2 DVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRA--------LLRKILTPEARERLER 53 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 I L +P+ A VE L++ AQ G + +S+E +LLE+I+ T ++ ++ I R+ Sbjct: 54 IRLARPEFAEAVEVQLIQLAQLGRLPIPLSDEDFKALLERISALTKRKREIKIVRK 109
>DNBP_METTH (O27652) DNA-binding protein MTH1615| Length = 111 Score = 53.5 bits (127), Expect = 3e-07 Identities = 33/116 (28%), Positives = 61/116 (52%) Frame = +2 Query: 125 ELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERLSR 304 +LE IR+++M E+ + +QQ A ++ QIL+ EAR RL+ Sbjct: 3 DLEEIRRKKMLELQQK----AQQQAMEAEAQEQMRQQLEMQKKQIMMQILTPEARSRLAN 58 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 + L +PD +E L++ AQ G + K+++E+L LL+++ K+ ++ I R+ Sbjct: 59 LRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRV---AGKKREIKISRK 111
>Y157_METMP (Q6M0W1) DNA-binding protein MMP0157| Length = 119 Score = 53.5 bits (127), Expect = 3e-07 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 2/116 (1%) Frame = +2 Query: 131 EAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXM-MLAQILSSEARERLSRI 307 E IRQRR+QE+ + A N +L QILS EAR RL+RI Sbjct: 4 EEIRQRRLQEMQAKAQAQGAANDPEAQRQMQEQQMQYEMQKQKILRQILSEEARSRLARI 63 Query: 308 ALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQI-NTHTSKQTKVTIQRR 472 L KP A VE L++ AQ G + +++E LL++I + + ++TI R+ Sbjct: 64 KLAKPQFAEQVEMQLIQLAQAGKLPVPLTDEYFKGLLDKIYEMNRPAKKEITIMRK 119
>Y2068_ARCFU (O28211) DNA-binding protein AF2068| Length = 111 Score = 52.8 bits (125), Expect = 5e-07 Identities = 31/101 (30%), Positives = 52/101 (51%) Frame = +2 Query: 125 ELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERLSR 304 +LE IR+R++ E+ Q+ Q +L IL EA+ERLSR Sbjct: 6 DLEEIRRRKLMELQRQKELEELQKEEMRRQVEAQKKA-------ILRAILEPEAKERLSR 58 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQI 427 + L P+ A VE+ L+ AQ G I K++++ L+ +L+++ Sbjct: 59 LKLAHPEIAEAVENQLIYLAQAGRIQSKITDKMLVEILKRV 99
>Y803_METMA (Q8PYQ7) DNA-binding protein MM0803| Length = 120 Score = 52.8 bits (125), Expect = 5e-07 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 116 HDPELEAIRQRRMQEIMGQRGA-PSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARE 292 +D ELE IR+RR+ EI Q+ PS A +L QIL+ EARE Sbjct: 6 NDDELEEIRKRRLAEIQRQQAQQPSDMQAAYQQEQARAEMEAQKQS--ILRQILTPEARE 63 Query: 293 RLSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQR 469 RL+ + + +P +E L+ AQ+G + ++ +E+L +LL ++ K+ K +I R Sbjct: 64 RLTTLKMSRPALGEQLELQLISLAQSGRLQSQIDDEQLKTLLMRMQ---PKKRKTSITR 119
>Y2008_HALSA (Q9HNP3) DNA-binding protein Vng2008h| Length = 117 Score = 45.1 bits (105), Expect = 1e-04 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Frame = +2 Query: 119 DPELEAIRQRRMQEI-MGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARER 295 D LE +RQR+ +++ Q+G +++ A ML Q L+ AR+R Sbjct: 7 DDRLEELRQRKKEQLKQQQQGGDAEREAQQQQAQQAEQQKQA-----MLKQNLTDGARKR 61 Query: 296 LSRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQI 427 L+ I + KP+ A E +L AQ+G + ++ E+++ +L ++ Sbjct: 62 LNTIRMSKPEFAEQAEQQVLALAQSGRVQGRIDEDQMKEILREL 105
>Y3180_HALMA (Q5UXW7) DNA-binding protein rrnAC3180| Length = 114 Score = 42.7 bits (99), Expect = 5e-04 Identities = 27/118 (22%), Positives = 56/118 (47%) Frame = +2 Query: 119 DPELEAIRQRRMQEIMGQRGAPSQQNAGXXXXXXXXXXXXXXXXXMMLAQILSSEARERL 298 + ELE +R+++M+++ Q+G G +L Q L+ AR+RL Sbjct: 7 EEELEELRKKKMEQLKEQQG-------GEGEGQEAAQQQAEAQKQAVLKQNLTDGARKRL 59 Query: 299 SRIALVKPDKARGVEDVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTIQRR 472 + + + KP +E ++ A++G + ++ E+++ LL ++ T I+RR Sbjct: 60 NTVKMSKPQVGEQIEQQVVALARSGRVQGQIDEDQMKELLSEL---TPDSKSFDIKRR 114
>GAL1_MYCTU (P96910) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 363 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +2 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISE 385 IALV D+AR V D + RAA T G E Sbjct: 321 IALVPADRARDVADTVRRAAVTAGYDE 347
>GAL1_MYCBO (Q7U1L7) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 363 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +2 Query: 305 IALVKPDKARGVEDVLLRAAQTGGISE 385 IALV D+AR V D + RAA T G E Sbjct: 321 IALVPADRARDVADTVRRAAVTAGYDE 347
>DNAA_GEOSL (Q74GG6) Chromosomal replication initiator protein dnaA| Length = 445 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +2 Query: 314 VKPDKARGVE-DVLLRAAQTGGISEKVSEERLISLLEQINTHTSKQTKVTI 463 ++P K G + +VLL A + ++VSE L +LE + + T QTK+ + Sbjct: 25 IEPIKYLGSKKNVLLLEAPNQFVRDRVSESYLPMILESVQSLTDSQTKIEL 75
>MURG_XANOR (Q5GW41) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 441 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +2 Query: 266 QILSSEARERLSRI----ALVKPDKARGVEDVLLRAAQTGGISEKVSEER 403 Q L ++ RLS L KPD A + D++L+ A TG EER Sbjct: 333 QTLLTDPARRLSMANAARTLAKPDAAERIADIILQEAGTGDRQPPAVEER 382 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,488,476 Number of Sequences: 219361 Number of extensions: 1148042 Number of successful extensions: 3723 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3632 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3717 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)