ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2i02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 632 bits (319), Expect = e-178 Identities = 323/325 (99%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 120057 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 119998 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119997 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 119938 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119937 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 119878 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119877 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 119818 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119817 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 119758 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 119757 gttgagtgccgcaccctagatggct 119733 Score = 632 bits (319), Expect = e-178 Identities = 323/325 (99%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 94837 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 94896 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94897 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 94956 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94957 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 95016 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95017 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 95076 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95077 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 95136 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 95137 gttgagtgccgcaccctagatggct 95161
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 968 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 909 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 908 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 849 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 789 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 729 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 669 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 668 gttgagtgccgcaccctagatggct 644
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 44882 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 44823 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 44822 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 44763 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44762 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 44703 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44702 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 44643 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44642 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 44583 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 44582 gttgagtgccgcaccctagatggct 44558 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 20236 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 20295 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 20296 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 20355 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20356 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 20415 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20416 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 20475 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20476 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 20535 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 20536 gttgagtgccgcaccctagatggct 20560
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1511 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 1452 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1451 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 1392 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 1332 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 1272 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 1212 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 1211 gttgagtgccgcaccctagatggct 1187
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123721 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 123662 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 123661 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 123602 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123601 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 123542 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123541 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 123482 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123481 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 123422 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 123421 gttgagtgccgcaccctagatggct 123397 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99116 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 99175 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 99176 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 99235 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99236 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 99295 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99296 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 99355 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99356 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 99415 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 99416 gttgagtgccgcaccctagatggct 99440
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124438 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 124379 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124378 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 124319 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124318 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 124259 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124258 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 124199 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124198 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 124139 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 124138 gttgagtgccgcaccctagatggct 124114 Score = 624 bits (315), Expect = e-176 Identities = 322/325 (99%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99793 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 99852 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 99853 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 99912 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99913 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 99972 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99973 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 100032 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100033 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 100092 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 100093 gttgagtgccgcaccctagatggct 100117
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 118838 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 118779 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 118778 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 118719 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118718 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 118659 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118658 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 118599 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118598 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 118539 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 118538 gttgagtgccgcaccctagatggct 118514
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 119922 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 119863 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119862 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 119803 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119802 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 119743 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119742 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 119683 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 119623 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 119622 gttgagtgccgcaccctagatggct 119598 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 95234 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 95293 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95294 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 95353 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95354 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 95413 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95414 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 95473 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95474 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 95533 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 95534 gttgagtgccgcaccctagatggct 95558
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 119922 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 119863 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119862 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 119803 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119802 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 119743 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119742 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 119683 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 119623 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 119622 gttgagtgccgcaccctagatggct 119598 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 95234 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 95293 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95294 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 95353 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95354 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 95413 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95414 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 95473 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95474 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 95533 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 95534 gttgagtgccgcaccctagatggct 95558
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 119871 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 119812 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119811 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 119752 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 119692 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 119632 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 119572 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 119571 gttgagtgccgcaccctagatggct 119547 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 95179 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 95238 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95239 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 95298 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95299 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 95358 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95359 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 95418 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95419 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 95478 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 95479 gttgagtgccgcaccctagatggct 95503
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 31507812 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 31507871 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 31507872 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 31507931 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507932 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 31507991 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507992 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 31508051 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508052 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 31508111 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 31508112 gttgagtgccgcaccctagatggct 31508136
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 84784 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 84725 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 84724 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 84665 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84664 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 84605 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84604 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 84545 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84544 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 84485 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 84484 gttgagtgccgcaccctagatggct 84460
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 119891 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 119832 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119831 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 119772 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119771 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 119712 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119711 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 119652 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119651 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 119592 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 119591 gttgagtgccgcaccctagatggct 119567 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 95227 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 95286 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95287 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 95346 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95347 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 95406 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95407 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 95466 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95467 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 95526 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 95527 gttgagtgccgcaccctagatggct 95551
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 122276 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 122335 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 122336 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 122395 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122396 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 122455 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122456 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 122515 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122516 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 122575 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 122576 gttgagtgccgcaccctagatggct 122600 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 14001 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 14060 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 14061 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 14120 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14121 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 14180 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14181 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 14240 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14241 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 14300 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 14301 gttgagtgccgcaccctagatggct 14325
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 140809 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 140868 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 140869 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 140928 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140929 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 140988 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140989 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 141048 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141049 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 141108 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 141109 gttgagtgccgcaccctagatggct 141133
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 93405 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 93464 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 93465 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 93524 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93525 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 93584 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93585 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 93644 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93645 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 93704 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 93705 gttgagtgccgcaccctagatggct 93729
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 58610 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 58551 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 58550 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 58491 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58490 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 58431 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58430 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 58371 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58370 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 58311 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 58310 gttgagtgccgcaccctagatggct 58286
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 27469 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 27528 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 27529 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 27588 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27589 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 27648 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27649 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 27708 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27709 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 27768 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 27769 gttgagtgccgcaccctagatggct 27793
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9268161 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 9268220 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9268221 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 9268280 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268281 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 9268340 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268341 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 9268400 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268401 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 9268460 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 9268461 gttgagtgccgcaccctagatggct 9268485 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9227661 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 9227720 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9227721 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 9227780 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227781 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 9227840 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227841 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 9227900 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227901 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 9227960 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 9227961 gttgagtgccgcaccctagatggct 9227985 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9164250 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 9164309 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9164310 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 9164369 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164370 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 9164429 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164430 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 9164489 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164490 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 9164549 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 9164550 gttgagtgccgcaccctagatggct 9164574 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9056075 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 9056134 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9056135 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 9056194 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056195 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 9056254 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056255 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 9056314 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056315 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 9056374 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 9056375 gttgagtgccgcaccctagatggct 9056399
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 19938146 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 19938205 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19938206 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 19938265 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938266 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 19938325 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938326 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 19938385 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938386 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 19938445 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 19938446 gttgagtgccgcaccctagatggct 19938470 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10387013 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 10387072 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10387073 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 10387132 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387133 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 10387192 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387193 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 10387252 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387253 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 10387312 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 10387313 gttgagtgccgcaccctagatggct 10387337 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10277285 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 10277226 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10277225 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 10277166 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277165 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 10277106 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277105 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 10277046 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277045 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 10276986 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 10276985 gttgagtgccgcaccctagatggct 10276961 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ttgtgctgctaggcgaagcggttgagtgc 320 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 31598328 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 31598387 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 31598388 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 31598447 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598448 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 31598507 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598508 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 31598567 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598568 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 31598627 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 31598628 gttgagtgccgcaccctagatggct 31598652
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 33525644 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 33525703 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 33525704 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 33525763 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525764 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 33525823 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525824 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 33525883 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525884 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 33525943 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 33525944 gttgagtgccgcaccctagatggct 33525968 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttc 75 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 47897 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 47838 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 47837 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 47778 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47777 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 47718 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47717 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 47658 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47657 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 47598 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 47597 gttgagtgccgcaccctagatggct 47573
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 70841 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 70900 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 70901 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 70960 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70961 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 71020 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71021 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 71080 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71081 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 71140 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 71141 gttgagtgccgcaccctagatggct 71165
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 13 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 72 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 132 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 192 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 252 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 312 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 313 gttgagtgccgcaccctagatggct 337
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 14 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 73 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 74 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 133 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 193 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 253 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 313 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 314 gttgagtgccgcaccctagatggct 338
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 69 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 70 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 129 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 189 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 249 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 309 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 310 gttgagtgccgcaccctagatggct 334
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 19949422 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 19949481 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19949482 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 19949541 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949542 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 19949601 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949602 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 19949661 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949662 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 19949721 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 19949722 gttgagtgccgcaccctagatggct 19949746 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10393052 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 10393111 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10393112 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 10393171 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393172 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 10393231 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393232 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 10393291 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393292 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 10393351 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 10393352 gttgagtgccgcaccctagatggct 10393376 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10283324 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 10283265 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10283264 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 10283205 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283204 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 10283145 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283144 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 10283085 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283084 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 10283025 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 10283024 gttgagtgccgcaccctagatggct 10283000 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ttgtgctgctaggcgaagcggttgagtgc 320 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 119865 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 119806 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119805 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 119746 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119745 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 119686 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119685 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 119626 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119625 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 119566 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 119565 gttgagtgccgcaccctagatggct 119541 Score = 617 bits (311), Expect = e-173 Identities = 321/325 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 95174 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 95233 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95234 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 95293 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95294 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 95353 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95354 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 95413 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95414 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 95473 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 95474 gttgagtgccgcaccctagatggct 95498
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 609 bits (307), Expect = e-171 Identities = 320/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9242120 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 9242061 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9242060 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 9242001 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242000 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 9241941 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9241940 ccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcc 9241881 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241880 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 9241821 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 9241820 gttgagtgccgcaccctagatggct 9241796 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 174 actgaaacatcttagtagccagaggaaaagaaag 207 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 609 bits (307), Expect = e-171 Identities = 320/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 53333 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 53274 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 53273 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 53214 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53213 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 53154 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 53153 ccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcc 53094 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53093 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 53034 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 53033 gttgagtgccgcaccctagatggct 53009
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 601 bits (303), Expect = e-169 Identities = 319/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||| Sbjct: 123455 ggcttgcggtggatacctaggtacccagagatgaggaagggcgtagcaagcgacgaaatg 123396 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 123395 cttcggggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaa 123336 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123335 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 123276 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123275 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 123216 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123215 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 123156 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 123155 gttgagtgccgcaccctagatggct 123131
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 601 bits (303), Expect = e-169 Identities = 319/325 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||| Sbjct: 12825996 ggcttgcggtggatacctaggtacccagagatgaggaagggcgtagcaagcgacgaaatg 12825937 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 12825936 cttcggggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaa 12825877 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825876 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 12825817 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825816 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 12825757 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825756 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 12825697 Query: 312 gttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||| Sbjct: 12825696 gttgagtgccgcaccctagatggct 12825672
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 595 bits (300), Expect = e-167 Identities = 320/326 (98%), Gaps = 1/326 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaag-ggcgtagcaagcgacgaaat 70 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 123661 ggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaat 123602 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 123601 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 123542 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123541 actgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 123482 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123481 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 123422 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123421 ctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagc 123362 Query: 311 ggttgagtgccgcaccctagatggct 336 |||||||||||||||||||||||||| Sbjct: 123361 ggttgagtgccgcaccctagatggct 123336 Score = 595 bits (300), Expect = e-167 Identities = 320/326 (98%), Gaps = 1/326 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaag-ggcgtagcaagcgacgaaat 70 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 99076 ggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaat 99135 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 99136 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 99195 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99196 actgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 99255 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99256 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 99315 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99316 ctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagc 99375 Query: 311 ggttgagtgccgcaccctagatggct 336 |||||||||||||||||||||||||| Sbjct: 99376 ggttgagtgccgcaccctagatggct 99401
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 595 bits (300), Expect = e-167 Identities = 320/326 (98%), Gaps = 1/326 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaag-ggcgtagcaagcgacgaaat 70 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 5429 ggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaat 5488 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5489 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 5548 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5549 actgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 5608 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5609 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 5668 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5669 ctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagc 5728 Query: 311 ggttgagtgccgcaccctagatggct 336 |||||||||||||||||||||||||| Sbjct: 5729 ggttgagtgccgcaccctagatggct 5754
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 595 bits (300), Expect = e-167 Identities = 320/326 (98%), Gaps = 1/326 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaag-ggcgtagcaagcgacgaaat 70 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 17 ggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaat 76 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 77 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 136 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 actgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 196 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 256 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 257 ctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagc 316 Query: 311 ggttgagtgccgcaccctagatggct 336 |||||||||||||||||||||||||| Sbjct: 317 ggttgagtgccgcaccctagatggct 342
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 567 bits (286), Expect = e-159 Identities = 292/294 (99%) Strand = Plus / Plus Query: 43 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 103 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 162 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 163 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 223 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 283 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 294
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 551 bits (278), Expect = e-154 Identities = 313/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 136576 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 136517 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 136516 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaa 136457 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136456 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 136398 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136397 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 136338 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 136337 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 136278 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 136277 gtggagtgctgcaccctagatggc 136254 Score = 551 bits (278), Expect = e-154 Identities = 313/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 105849 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 105908 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 105909 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaa 105968 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105969 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106027 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106028 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106087 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106088 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 106147 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 106148 gtggagtgctgcaccctagatggc 106171
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 543 bits (274), Expect = e-151 Identities = 312/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139571 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 139512 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 139511 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 139452 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139451 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 139393 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139392 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 139333 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 139332 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 139273 Query: 312 gttgagtgccgcaccctagatggc 335 || |||| | |||||||||||||| Sbjct: 139272 gtggagtactgcaccctagatggc 139249 Score = 543 bits (274), Expect = e-151 Identities = 312/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110374 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 110433 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 110434 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 110493 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110494 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 110552 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110553 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 110612 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 110613 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 110672 Query: 312 gttgagtgccgcaccctagatggc 335 || |||| | |||||||||||||| Sbjct: 110673 gtggagtactgcaccctagatggc 110696
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 543 bits (274), Expect = e-151 Identities = 312/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142093 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 142034 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || Sbjct: 142033 cttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaa 141974 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141973 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 141915 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141914 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 141855 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141854 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 141795 Query: 312 gttgagtgccgcaccctagatggc 335 ||||||| | |||||||||||||| Sbjct: 141794 gttgagtactgcaccctagatggc 141771 Score = 543 bits (274), Expect = e-151 Identities = 312/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111564 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 111623 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || Sbjct: 111624 cttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaa 111683 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111684 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 111742 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111743 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 111802 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111803 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 111862 Query: 312 gttgagtgccgcaccctagatggc 335 ||||||| | |||||||||||||| Sbjct: 111863 gttgagtactgcaccctagatggc 111886
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 537 bits (271), Expect = e-150 Identities = 312/325 (96%), Gaps = 1/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 134966 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 134907 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 134906 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 134847 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134846 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 134788 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134787 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 134728 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134727 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 134668 Query: 312 gttgagtgccgcaccctagatggct 336 || |||||| ||||||||||||||| Sbjct: 134667 gtggagtgctgcaccctagatggct 134643 Score = 537 bits (271), Expect = e-150 Identities = 312/325 (96%), Gaps = 1/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 105316 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 105375 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 105376 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 105435 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105436 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 105494 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105495 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 105554 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105555 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 105614 Query: 312 gttgagtgccgcaccctagatggct 336 || |||||| ||||||||||||||| Sbjct: 105615 gtggagtgctgcaccctagatggct 105639
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 132983 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 132924 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || Sbjct: 132923 cttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaa 132864 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132863 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 132805 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132804 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 132745 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 132744 taaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcg 132685 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||||||||||||||||| Sbjct: 132684 gtggagtgccgcaccctagatggc 132661 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 103781 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 103840 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || Sbjct: 103841 cttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaa 103900 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103901 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 103959 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103960 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 104019 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 104020 taaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcg 104079 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||||||||||||||||| Sbjct: 104080 gtggagtgccgcaccctagatggc 104103
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 83 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaa 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 321 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 322 gtggagtgctgcaccctagatggc 345
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 83 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaa 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 321 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 322 gtggagtgctgcaccctagatggc 345
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 83 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaa 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 321 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 322 gtggagtgctgcaccctagatggc 345
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 83 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaa 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 321 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 322 gtggagtgctgcaccctagatggc 345
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 127849 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 127790 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 127789 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 127730 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127729 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 127671 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127670 ccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcc 127611 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127610 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcg 127551 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 127550 gtggagtgctgcaccctagatggc 127527 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107073 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 107132 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 107133 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 107192 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107193 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 107251 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107252 ccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcc 107311 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107312 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcg 107371 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 107372 gtggagtgctgcaccctagatggc 107395
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134208 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 134149 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 134148 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 134089 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134088 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 134030 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134029 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 133970 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133969 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 133910 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 133909 gtggaatgctgcaccctagatggc 133886 Score = 535 bits (270), Expect = e-149 Identities = 311/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103763 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 103822 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 103823 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 103882 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103883 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 103941 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103942 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 104001 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104002 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 104061 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 104062 gtggaatgctgcaccctagatggc 104085
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 529 bits (267), Expect = e-147 Identities = 277/281 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 13 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 72 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 132 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 192 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 252 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgt 292 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 taaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 529 bits (267), Expect = e-147 Identities = 277/281 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 13 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 72 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 132 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 192 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 252 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgt 292 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 taaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 132760 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 132701 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| Sbjct: 132700 cttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaa 132641 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132640 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 132582 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132581 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 132522 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132521 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 132462 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 132461 gtagaatgctgcaccctagatggc 132438 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 104118 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 104177 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| Sbjct: 104178 cttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaa 104237 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104238 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 104296 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104297 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 104356 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104357 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 104416 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 104417 gtagaatgctgcaccctagatggc 104440
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 131652 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 131593 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| Sbjct: 131592 cttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaa 131533 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131532 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 131474 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131473 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 131414 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131413 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 131354 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 131353 gtagaatgctgcaccctagatggc 131330 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 102983 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 103042 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| Sbjct: 103043 cttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaa 103102 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103103 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 103161 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103162 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 103221 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103222 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 103281 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 103282 gtagaatgctgcaccctagatggc 103305
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 140345 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 140286 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 140285 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 140226 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140225 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 140167 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140166 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 140107 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 140106 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 140047 Query: 312 gttgagtgccgcaccctagatggc 335 | || ||| |||||||||||||| Sbjct: 140046 gcggaatgctgcaccctagatggc 140023 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 109715 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 109774 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 109775 cttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaa 109834 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 109835 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 109893 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109894 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 109953 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 109954 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 110013 Query: 312 gttgagtgccgcaccctagatggc 335 | || ||| |||||||||||||| Sbjct: 110014 gcggaatgctgcaccctagatggc 110037
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 14 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 73 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || Sbjct: 74 cttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaa 133 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 192 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 252 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 253 taaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcg 312 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||||||||||||||||| Sbjct: 313 gtggagtgccgcaccctagatggc 336
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 83 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaa 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 321 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 322 gtggagtgctgcaccctagatggc 345
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 83 cttcggggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaa 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcg 321 Query: 312 gttgagtgccgcaccctagatggc 335 || |||||| |||||||||||||| Sbjct: 322 gtggagtgctgcaccctagatggc 345
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 133944 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 133885 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || Sbjct: 133884 cttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaa 133825 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133824 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 133766 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133765 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 133706 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 133705 taaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcg 133646 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||||||||||||||||| Sbjct: 133645 gtggagtgccgcaccctagatggc 133622 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 104705 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 104764 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || Sbjct: 104765 cttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaa 104824 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104825 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 104883 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104884 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 104943 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 104944 taaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcg 105003 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||||||||||||||||| Sbjct: 105004 gtggagtgccgcaccctagatggc 105027
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 132753 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 132694 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| Sbjct: 132693 cttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaa 132634 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132633 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 132575 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132574 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 132515 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132514 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 132455 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 132454 gtagaatgctgcaccctagatggc 132431 Score = 527 bits (266), Expect = e-147 Identities = 310/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 104116 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 104175 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| Sbjct: 104176 cttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaa 104235 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104236 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 104294 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104295 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 104354 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104355 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 104414 Query: 312 gttgagtgccgcaccctagatggc 335 || || ||| |||||||||||||| Sbjct: 104415 gtagaatgctgcaccctagatggc 104438
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 521 bits (263), Expect = e-145 Identities = 304/317 (95%), Gaps = 1/317 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggg 130454 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | || Sbjct: 130453 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tg 130395 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130394 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 130335 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130334 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 130275 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| Sbjct: 130274 tgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagt 130215 Query: 319 gccgcaccctagatggc 335 ||||||||||||||||| Sbjct: 130214 gccgcaccctagatggc 130198 Score = 521 bits (263), Expect = e-145 Identities = 304/317 (95%), Gaps = 1/317 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggg 102002 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | || Sbjct: 102003 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tg 102061 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102062 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 102121 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102122 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 102181 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| Sbjct: 102182 tgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagt 102241 Query: 319 gccgcaccctagatggc 335 ||||||||||||||||| Sbjct: 102242 gccgcaccctagatggc 102258
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 519 bits (262), Expect = e-144 Identities = 309/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 106020 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 106079 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 106080 cttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 106139 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106140 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106198 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106199 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106258 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106259 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 106318 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||| |||||||||||||| Sbjct: 106319 gtggagtgttgcaccctagatggc 106342 Score = 505 bits (255), Expect = e-140 Identities = 309/325 (95%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 135889 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 135830 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 135829 cttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 135770 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135769 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135711 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135710 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135651 Query: 252 taaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 135650 taaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagc 135591 Query: 311 ggttgagtgccgcaccctagatggc 335 || ||||| |||||||||||||| Sbjct: 135590 agtggagtgttgcaccctagatggc 135566
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 519 bits (262), Expect = e-144 Identities = 309/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 136165 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 136106 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 136105 cttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 136046 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136045 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135987 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135986 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135927 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135926 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 135867 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||| |||||||||||||| Sbjct: 135866 gtggagtgttgcaccctagatggc 135843 Score = 519 bits (262), Expect = e-144 Identities = 309/324 (95%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 106242 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 106301 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 106302 cttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 106361 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106362 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106420 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106421 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106480 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106481 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 106540 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||| |||||||||||||| Sbjct: 106541 gtggagtgttgcaccctagatggc 106564
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 515 bits (260), Expect = e-143 Identities = 301/314 (95%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 81 Query: 82 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 141 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 82 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 140 Query: 142 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 201 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 200 Query: 202 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 260 Query: 262 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 321 ||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 261 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatact 320 Query: 322 gcaccctagatggc 335 |||||||||||||| Sbjct: 321 gcaccctagatggc 334
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 507 bits (256), Expect = e-141 Identities = 310/326 (95%), Gaps = 2/326 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 15 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 74 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 75 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaa 134 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 135 ctg-ctgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtag 193 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 194 ccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagc 253 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 254 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 313 Query: 311 ggttgagtgccgcaccctagatggct 336 ||| ||||||| ||||||||||||| Sbjct: 314 ggtgaagtgccgaaccctagatggct 339
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 504 bits (254), Expect = e-139 Identities = 307/324 (94%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 139489 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 139430 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 139429 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaa 139370 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 139369 ctgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtag 139311 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139310 ccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 139251 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 139250 taaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcg 139191 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||| |||||||||||| Sbjct: 139190 gtgaagtgccgaaccctagatggc 139167 Score = 504 bits (254), Expect = e-139 Identities = 307/324 (94%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 109608 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 109667 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 109668 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaa 109727 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 109728 ctgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtag 109786 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109787 ccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 109846 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 109847 taaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcg 109906 Query: 312 gttgagtgccgcaccctagatggc 335 || ||||||| |||||||||||| Sbjct: 109907 gtgaagtgccgaaccctagatggc 109930
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 504 bits (254), Expect = e-139 Identities = 308/324 (95%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 139698 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 139639 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 139638 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaa 139579 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139578 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 139520 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139519 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 139460 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139459 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 139400 Query: 312 gt-tgagtgccgcaccctagatgg 334 || || ||| ||||||||||||| Sbjct: 139399 gtgcgaatgctgcaccctagatgg 139376 Score = 504 bits (254), Expect = e-139 Identities = 308/324 (95%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 109601 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 109660 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 109661 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaa 109720 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 109721 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 109779 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109780 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 109839 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 109840 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 109899 Query: 312 gt-tgagtgccgcaccctagatgg 334 || || ||| ||||||||||||| Sbjct: 109900 gtgcgaatgctgcaccctagatgg 109923
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 500 bits (252), Expect = e-138 Identities = 302/318 (94%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagagacgaagaagggcgtattaatcgacgaaatgcttcggg 46333 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 46334 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 46392 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46393 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagagg 46452 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 46453 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 46512 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 46513 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 46572 Query: 319 gccgcaccctagatggct 336 ||||||||||||||||| Sbjct: 46573 accgcaccctagatggct 46590
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 136923 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 136864 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 136863 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 136804 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136803 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 136745 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136744 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 136685 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136684 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 136625 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 136624 gcctgaatgctgcaccctagatggc 136600 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 106634 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 106693 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 106694 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 106753 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106754 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106812 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106813 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106872 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106873 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 106932 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 106933 gcctgaatgctgcaccctagatggc 106957
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 135531 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 135472 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 135471 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 135412 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135411 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135353 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135352 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135293 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135292 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 135233 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 135232 gcctgaatgctgcaccctagatggc 135208 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 105505 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 105564 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 105565 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 105624 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105625 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 105683 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105684 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 105743 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105744 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 105803 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 105804 gcctgaatgctgcaccctagatggc 105828
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 498 bits (251), Expect = e-138 Identities = 301/317 (94%), Gaps = 1/317 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 130 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 131 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tg 189 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 190 ctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggagg 249 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 309 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 310 tgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagt 369 Query: 319 gccgcaccctagatggc 335 |||| |||||||||||| Sbjct: 370 gccgaaccctagatggc 386
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 135666 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 135607 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 135606 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 135547 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135546 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135488 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135487 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135428 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135427 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 135368 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 135367 gcctgaatgctgcaccctagatggc 135343 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 105677 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 105736 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 105737 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 105796 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105797 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 105855 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105856 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 105915 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105916 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 105975 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 105976 gcctgaatgctgcaccctagatggc 106000
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 135664 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 135605 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 135604 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 135545 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135544 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135486 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135485 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135426 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135425 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 135366 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 135365 gcctgaatgctgcaccctagatggc 135341 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 105674 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 105733 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 105734 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 105793 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105794 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 105852 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105853 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 105912 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105913 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 105972 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 105973 gcctgaatgctgcaccctagatggc 105997
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 135576 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 135517 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 135516 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 135457 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135456 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135398 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135397 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135338 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135337 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 135278 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 135277 gcctgaatgctgcaccctagatggc 135253 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 105552 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 105611 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 105612 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 105671 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105672 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 105730 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105731 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 105790 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105791 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 105850 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 105851 gcctgaatgctgcaccctagatggc 105875
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 135543 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 135484 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 135483 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 135424 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135423 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135365 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135364 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135305 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135304 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 135245 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 135244 gcctgaatgctgcaccctagatggc 135220 Score = 498 bits (251), Expect = e-138 Identities = 308/325 (94%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 105519 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 105578 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 105579 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 105638 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105639 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 105697 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105698 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 105757 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc- 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105758 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagca 105817 Query: 311 ggttgagtgccgcaccctagatggc 335 | ||| ||| |||||||||||||| Sbjct: 105818 gcctgaatgctgcaccctagatggc 105842
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 496 bits (250), Expect = e-137 Identities = 306/324 (94%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 15 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 74 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| | Sbjct: 75 gcttcggggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttga 134 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135 actgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagta 193 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 194 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 253 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| Sbjct: 254 ctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagc 313 Query: 311 ggttgagtgccgcaccctagatgg 334 |||||||| |||||||| |||||| Sbjct: 314 ggttgagtcccgcaccccagatgg 337
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 494 bits (249), Expect = e-136 Identities = 287/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 136285 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 136226 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 136225 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 136166 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136165 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 136107 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136106 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 136047 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136046 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135988 Score = 494 bits (249), Expect = e-136 Identities = 287/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 106345 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 106404 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 106405 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 106464 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106465 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106523 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106524 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106583 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106584 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106642
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 494 bits (249), Expect = e-136 Identities = 287/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 1539 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 1598 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 1599 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 1658 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1659 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 1717 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1718 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 1777 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1778 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 1836
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 494 bits (249), Expect = e-136 Identities = 287/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 136283 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 136224 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 136223 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 136164 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136163 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 136105 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136104 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 136045 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136044 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135986 Score = 494 bits (249), Expect = e-136 Identities = 287/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 106343 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 106402 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 106403 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 106462 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106463 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106521 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106522 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106581 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106582 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106640
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 85 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 144 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 145 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 205 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 265 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 325 ccctagatggct 336 |||||||||||| Sbjct: 241 ccctagatggct 252
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 492 bits (248), Expect = e-136 Identities = 298/314 (94%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 21 tggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 80 ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcgggga 60 Query: 81 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 61 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgcc 119 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 120 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaa 179 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 239 Query: 261 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 320 |||||||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 240 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacac 299 Query: 321 cgcaccctagatgg 334 |||||||||||||| Sbjct: 300 cgcaccctagatgg 313
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 488 bits (246), Expect = e-135 Identities = 299/316 (94%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 4581 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 4582 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 4640 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 4700 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4701 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 4760 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 4761 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaat 4820 Query: 319 gccgcaccctagatgg 334 | ||||||||||||| Sbjct: 4821 gttgcaccctagatgg 4836
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 488 bits (246), Expect = e-135 Identities = 299/316 (94%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 4581 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 4582 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 4640 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 4700 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4701 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 4760 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 4761 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaat 4820 Query: 319 gccgcaccctagatgg 334 | ||||||||||||| Sbjct: 4821 gttgcaccctagatgg 4836
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 486 bits (245), Expect = e-134 Identities = 304/323 (94%), Gaps = 1/323 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 131776 ggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatg 131717 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || Sbjct: 131716 cttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaa 131657 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131656 cttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 131598 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131597 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 131538 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 131537 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatca 131478 Query: 312 gttgagtgccgcaccctagatgg 334 || |||||| | ||||||||||| Sbjct: 131477 gtggagtgcggaaccctagatgg 131455 Score = 486 bits (245), Expect = e-134 Identities = 304/323 (94%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 101669 ggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatg 101728 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || Sbjct: 101729 cttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaa 101788 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 101789 cttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 101847 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101848 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 101907 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 101908 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatca 101967 Query: 312 gttgagtgccgcaccctagatgg 334 || |||||| | ||||||||||| Sbjct: 101968 gtggagtgcggaaccctagatgg 101990
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 486 bits (245), Expect = e-134 Identities = 286/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 136014 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 135955 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| || Sbjct: 135954 cttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaa 135895 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135894 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 135836 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135835 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 135776 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135775 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135717 Score = 486 bits (245), Expect = e-134 Identities = 286/299 (95%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 106124 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 106183 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| || Sbjct: 106184 cttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaa 106243 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106244 ctgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 106302 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106303 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 106362 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106363 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106421
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 480 bits (242), Expect = e-132 Identities = 277/288 (96%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 23 gatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 82 ||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| Sbjct: 1 gatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagt 60 Query: 83 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 142 ||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||| Sbjct: 61 tgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctga 119 Query: 143 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 202 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 179 Query: 203 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 239 Query: 263 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 240 aacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 287
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 93 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 152 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 153 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 213 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 273 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 333 ggct 336 |||| Sbjct: 241 ggct 244
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 474 bits (239), Expect = e-131 Identities = 242/243 (99%) Strand = Plus / Plus Query: 94 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 153 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 154 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 214 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 274 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 334 gct 336 ||| Sbjct: 241 gct 243
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 470 bits (237), Expect = e-129 Identities = 305/326 (93%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 86276 gggcttacggtggatacctaggcacccagagacgaggaagggcgtggtaagcgacgaaat 86335 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| | Sbjct: 86336 gcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaaccctttta 86395 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86396 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 86454 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86455 gccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagc 86514 Query: 251 ctaaaccgtgaaaacggggttgtgggagag--caatacaagcgttgtgctgctaggcgaa 308 |||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 86515 ctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaa 86574 Query: 309 gcggttgagtgccgcaccctagatgg 334 |||||||||| | ||||||||||||| Sbjct: 86575 gcggttgagtcctgcaccctagatgg 86600
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 470 bits (237), Expect = e-129 Identities = 302/323 (93%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| || Sbjct: 83 cttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 cttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatct 321 Query: 312 gttgagtgccgcaccctagatgg 334 || |||||| | ||||||||||| Sbjct: 322 gtggagtgcggtaccctagatgg 344
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 470 bits (237), Expect = e-129 Identities = 302/323 (93%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatg 82 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| || Sbjct: 83 cttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaa 142 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 cttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 201 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 261 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 262 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatct 321 Query: 312 gttgagtgccgcaccctagatgg 334 || |||||| | ||||||||||| Sbjct: 322 gtggagtgcggtaccctagatgg 344
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 470 bits (237), Expect = e-129 Identities = 302/323 (93%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 511 ggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatg 570 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| || Sbjct: 571 cttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaa 630 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 cttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtag 689 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 749 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcg 311 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 750 taaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatct 809 Query: 312 gttgagtgccgcaccctagatgg 334 || |||||| | ||||||||||| Sbjct: 810 gtggagtgcggtaccctagatgg 832
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 470 bits (237), Expect = e-129 Identities = 305/326 (93%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 88362 gggcttacggtggatacctaggcacccagagacgaggaagggcgtggtaagcgacgaaat 88421 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| Sbjct: 88422 gcttcggggagttgaaaattagcatagatccggagattcccgaataggttaacctttttc 88481 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 88482 actgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagta 88540 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88541 gccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 88600 Query: 251 ctaaaccgtgaaaacggggttgtgggagag--caatacaagcgttgtgctgctaggcgaa 308 |||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 88601 ctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaa 88660 Query: 309 gcggttgagtgccgcaccctagatgg 334 |||||||||| | ||||||||||||| Sbjct: 88661 gcggttgagtcctgcaccctagatgg 88686
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 468 bits (236), Expect = e-129 Identities = 239/240 (99%) Strand = Plus / Plus Query: 97 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 156 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 217 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 277 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 466 bits (235), Expect = e-128 Identities = 295/313 (94%), Gaps = 2/313 (0%) Strand = Plus / Minus Query: 23 gatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 82 ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 142794 Query: 83 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 142 ||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||| Sbjct: 142793 tgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctga 142735 Query: 143 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 202 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142734 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 142675 Query: 203 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142674 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 142615 Query: 263 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgcc 321 |||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 142614 aacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgct 142555 Query: 322 gcaccctagatgg 334 ||||||||||||| Sbjct: 142554 gcaccctagatgg 142542 Score = 466 bits (235), Expect = e-128 Identities = 295/313 (94%), Gaps = 2/313 (0%) Strand = Plus / Plus Query: 23 gatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 82 ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 110534 Query: 83 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 142 ||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||| Sbjct: 110535 tgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctga 110593 Query: 143 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 202 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110594 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 110653 Query: 203 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110654 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 110713 Query: 263 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgcc 321 |||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 110714 aacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgct 110773 Query: 322 gcaccctagatgg 334 ||||||||||||| Sbjct: 110774 gcaccctagatgg 110786
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 464 bits (234), Expect = e-128 Identities = 278/292 (95%), Gaps = 1/292 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 4312 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 4313 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 4371 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4372 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 4431 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4432 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 4491 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 4492 tgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagc 4543
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 464 bits (234), Expect = e-128 Identities = 278/292 (95%), Gaps = 1/292 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 23613 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 23612 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 23554 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23553 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 23494 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23493 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 23434 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 23433 tgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagc 23382
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 462 bits (233), Expect = e-127 Identities = 285/299 (95%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 115 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatg 174 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 175 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaa 234 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-a 190 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 235 ctg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtga 293 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 353 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 309 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 354 ctaaaccgtgaaaac-gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaag 411
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3904 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 3963 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 3964 gcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttga 4023 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| || || | |||||||||||| ||||||||||||||||||||||| Sbjct: 4024 actgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagta 4082 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4083 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 4142 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 4143 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagc 4202 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | |||||| |||||| Sbjct: 4203 agttgagttctgcaccccagatgg 4226
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 146545 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 146486 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| | Sbjct: 146485 gcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttga 146426 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 146425 actac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagta 146367 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146366 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 146307 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 146306 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagc 146247 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | | ||||||||||| Sbjct: 146246 agttgagtcctgtaccctagatgg 146223 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111917 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 111976 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| | Sbjct: 111977 gcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttga 112036 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 112037 actac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagta 112095 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112096 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 112155 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 112156 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagc 112215 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | | ||||||||||| Sbjct: 112216 agttgagtcctgtaccctagatgg 112239
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 456 bits (230), Expect = e-125 Identities = 295/316 (93%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 2125 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 2126 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 2184 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2185 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 2244 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 2245 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccg 2304 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| Sbjct: 2305 tgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagt 2364 Query: 319 gccgcaccctagatgg 334 | ||||||||||||| Sbjct: 2365 cctgcaccctagatgg 2380
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 73 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 74 gcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttga 133 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| || || | |||||||||||| ||||||||||||||||||||||| Sbjct: 134 actgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagta 192 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 252 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 253 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagc 312 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | |||||| |||||| Sbjct: 313 agttgagttctgcaccccagatgg 336
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 151231 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 151172 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 151171 gcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttga 151112 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| || || | |||||||||||| ||||||||||||||||||||||| Sbjct: 151111 actgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagta 151053 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 151052 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 150993 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 150992 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagc 150933 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | |||||| |||||| Sbjct: 150932 agttgagttctgcaccccagatgg 150909 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 117435 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 117494 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 117495 gcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttga 117554 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| || || | |||||||||||| ||||||||||||||||||||||| Sbjct: 117555 actgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagta 117613 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117614 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 117673 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 117674 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagc 117733 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | |||||| |||||| Sbjct: 117734 agttgagttctgcaccccagatgg 117757
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 456 bits (230), Expect = e-125 Identities = 295/316 (93%), Gaps = 1/316 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 118068 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 118067 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 118009 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118008 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 117949 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 117948 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccg 117889 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| Sbjct: 117888 tgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagt 117829 Query: 319 gccgcaccctagatgg 334 | ||||||||||||| Sbjct: 117828 cctgcaccctagatgg 117813 Score = 456 bits (230), Expect = e-125 Identities = 295/316 (93%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 90034 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 90035 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 90093 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90094 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 90153 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 90154 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccg 90213 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| Sbjct: 90214 tgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagt 90273 Query: 319 gccgcaccctagatgg 334 | ||||||||||||| Sbjct: 90274 cctgcaccctagatgg 90289
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 456 bits (230), Expect = e-125 Identities = 301/324 (92%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 73 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 74 gcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttga 133 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| || || | |||||||||||| ||||||||||||||||||||||| Sbjct: 134 actgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagta 192 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 gccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagc 252 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 253 ctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagc 312 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | |||||| |||||| Sbjct: 313 agttgagttctgcaccccagatgg 336
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 442 bits (223), Expect = e-121 Identities = 301/325 (92%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||| |||| || |||||||||| Sbjct: 52671 ggcttacggtggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatg 52612 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 52611 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaa 52552 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 52551 ctgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtag 52493 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52492 ccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcc 52433 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gc 310 ||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | Sbjct: 52432 taaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacga 52373 Query: 311 ggttgagtgccgcaccctagatggc 335 | |||| ||| |||||||||||||| Sbjct: 52372 gcttgaatgctgcaccctagatggc 52348 Score = 442 bits (223), Expect = e-121 Identities = 301/325 (92%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||| |||| || |||||||||| Sbjct: 37157 ggcttacggtggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatg 37216 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 37217 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaa 37276 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 37277 ctgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtag 37335 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 37336 ccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcc 37395 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gc 310 ||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | Sbjct: 37396 taaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacga 37455 Query: 311 ggttgagtgccgcaccctagatggc 335 | |||| ||| |||||||||||||| Sbjct: 37456 gcttgaatgctgcaccctagatggc 37480
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 442 bits (223), Expect = e-121 Identities = 298/320 (93%), Gaps = 4/320 (1%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 131790 Query: 79 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 137 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 131789 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 131731 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 |||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 131730 gctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 131671 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131670 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131611 Query: 258 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 317 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 131610 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 131551 Query: 318 --tgccgcaccctagatggc 335 ||| |||||||||||||| Sbjct: 131550 aatgctgcaccctagatggc 131531 Score = 442 bits (223), Expect = e-121 Identities = 298/320 (93%), Gaps = 4/320 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 103604 Query: 79 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 137 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 103605 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 103663 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 |||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 103664 gctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 103723 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103724 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 103783 Query: 258 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 317 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 103784 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 103843 Query: 318 --tgccgcaccctagatggc 335 ||| |||||||||||||| Sbjct: 103844 aatgctgcaccctagatggc 103863
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 442 bits (223), Expect = e-121 Identities = 301/325 (92%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||| |||| || |||||||||| Sbjct: 4085 ggcttacggtggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatg 4144 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 4145 cttcggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaa 4204 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 4205 ctgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtag 4263 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4264 ccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcc 4323 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gc 310 ||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | Sbjct: 4324 taaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacga 4383 Query: 311 ggttgagtgccgcaccctagatggc 335 | |||| ||| |||||||||||||| Sbjct: 4384 gcttgaatgctgcaccctagatggc 4408
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 438 bits (221), Expect = e-120 Identities = 303/330 (91%), Gaps = 7/330 (2%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||||||| Sbjct: 128431 ggcttacggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatg 128372 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| || Sbjct: 128371 cttcggggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaa 128312 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 128311 ctgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtag 128253 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||| Sbjct: 128252 ccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcc 128193 Query: 252 taaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggc 305 ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 128192 taaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggc 128133 Query: 306 gaagcggttgagtgccgcaccctagatggc 335 ||||||||||||| |||||||||||||||| Sbjct: 128132 gaagcggttgagtcccgcaccctagatggc 128103 Score = 438 bits (221), Expect = e-120 Identities = 303/330 (91%), Gaps = 7/330 (2%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||||||| Sbjct: 95016 ggcttacggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatg 95075 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| || Sbjct: 95076 cttcggggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaa 95135 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95136 ctgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtag 95194 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||| Sbjct: 95195 ccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcc 95254 Query: 252 taaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggc 305 ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 95255 taaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggc 95314 Query: 306 gaagcggttgagtgccgcaccctagatggc 335 ||||||||||||| |||||||||||||||| Sbjct: 95315 gaagcggttgagtcccgcaccctagatggc 95344
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 434 bits (219), Expect = e-119 Identities = 293/317 (92%), Gaps = 1/317 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgg 77 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 78 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 137 |||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-t 123 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124 gctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggag 183 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 184 gaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaacc 243 Query: 258 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 317 ||||||||||||||||||| |||| | | |||| |||| ||||||||||||| |||||| Sbjct: 244 gtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgag 303 Query: 318 tgccgcaccctagatgg 334 | | ||||||||||||| Sbjct: 304 tcctgcaccctagatgg 320
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 434 bits (219), Expect = e-119 Identities = 297/320 (92%), Gaps = 4/320 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 2680 Query: 79 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 137 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 2681 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 2739 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 |||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2740 gctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagag 2799 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2800 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 2859 Query: 258 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 317 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 2860 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 2919 Query: 318 --tgccgcaccctagatggc 335 ||| |||||||||||||| Sbjct: 2920 aatgctgcaccctagatggc 2939
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 434 bits (219), Expect = e-119 Identities = 297/320 (92%), Gaps = 4/320 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 935 Query: 79 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 137 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 936 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 994 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 |||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 995 gctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagag 1054 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1114 Query: 258 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 317 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 1115 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 1174 Query: 318 --tgccgcaccctagatggc 335 ||| |||||||||||||| Sbjct: 1175 aatgctgcaccctagatggc 1194
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 432 bits (218), Expect = e-118 Identities = 299/324 (92%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 116195 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 116136 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| || Sbjct: 116135 gcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaa 116076 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 116075 actgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagta 116017 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 116016 gccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagc 115957 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||| |||||||||| |||| | | ||| |||||| ||||||||||||| Sbjct: 115956 ctaaaccgtgaaaac-gggttgtgggggagctaaataagtgttgtgttgctaggcgaagc 115898 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | ||||||||||||| Sbjct: 115897 agttgagtcctgcaccctagatgg 115874 Score = 432 bits (218), Expect = e-118 Identities = 299/324 (92%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 85925 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 85984 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| || Sbjct: 85985 gcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaa 86044 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 86045 actgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagta 86103 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 86104 gccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagc 86163 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||| |||||||||| |||| | | ||| |||||| ||||||||||||| Sbjct: 86164 ctaaaccgtgaaaac-gggttgtgggggagctaaataagtgttgtgttgctaggcgaagc 86222 Query: 311 ggttgagtgccgcaccctagatgg 334 ||||||| | ||||||||||||| Sbjct: 86223 agttgagtcctgcaccctagatgg 86246
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 430 bits (217), Expect = e-117 Identities = 279/295 (94%), Gaps = 4/295 (1%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgg 77 |||||||||||||||||||||| |||||||||||||||| || | |||||||||||||| Sbjct: 1788 cggtggatacctaggcacccagagacgaggaagggcgtagtaatc-acgaaatgcttcgg 1846 Query: 78 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 137 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1847 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1905 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagag 1965 Query: 198 gaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 256 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1966 gaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2025 Query: 257 cgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 2026 cgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagc 2080
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 424 bits (214), Expect = e-116 Identities = 273/292 (93%), Gaps = 1/292 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 177053 ggtggatacctaggcacccagagaggaggaagggcgtagtaatcgacgaaatgcttcggg 177112 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 177113 gagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 177171 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 177172 ctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagagg 177231 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 177232 aaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccg 177291 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 177292 tgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagc 177343 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 gcgaactgaaacatcttagtagc 192 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 gcgaactgaaacatcttagtagc 192 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 414 bits (209), Expect = e-113 Identities = 299/328 (91%), Gaps = 5/328 (1%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 15 gggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 74 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||||||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 75 gcttcggggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaa 134 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| |||||||| ||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 135 actgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagta 193 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 194 gccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggc 253 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcg 306 |||||||||||||||||||||||||| |||| |||| |||| ||| ||||||||||| Sbjct: 254 ctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcg 313 Query: 307 aagcggttgagtgccgcaccctagatgg 334 |||| ||||||| | |||||| |||||| Sbjct: 314 aagcagttgagtcctgcaccccagatgg 341
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 414 bits (209), Expect = e-113 Identities = 216/219 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75781 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 75840 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75841 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 75900 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75901 ctgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 75960 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcg 230 ||||||||||||||||||||||||||||||||||||||| Sbjct: 75961 ccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ggcgaactgaaacatcttag 188 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 410 bits (207), Expect = e-111 Identities = 207/207 (100%) Strand = Plus / Plus Query: 130 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 190 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 250 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 310 cggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggct 207
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 410 bits (207), Expect = e-111 Identities = 245/257 (95%), Gaps = 1/257 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 79689 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 79688 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 79630 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79629 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 79570 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 79569 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 79510 Query: 259 tgaaaacggggttgtgg 275 ||||||||||||||||| Sbjct: 79509 tgaaaacggggttgtgg 79493
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 408 bits (206), Expect = e-111 Identities = 289/316 (91%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 83 gagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-tg 141 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 ctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagagg 201 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 202 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccg 261 Query: 259 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 318 |||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| | Sbjct: 262 tgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaat 321 Query: 319 gccgcaccctagatgg 334 | ||||| ||||||| Sbjct: 322 cctgcaccatagatgg 337
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 406 bits (205), Expect = e-110 Identities = 276/299 (92%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||| |||| || |||||||||| Sbjct: 15 ggcttacggtggatacctaggcacccagagacgaggaagggtgtagtaatcgacgaaatg 74 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||| |||||||| ||| || ||||||| | | Sbjct: 75 cttcggggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcaca 134 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135 ctgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtag 193 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 194 ccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcc 253 Query: 252 taaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 254 taaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 312
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 402 bits (203), Expect = e-109 Identities = 210/213 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75697 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 75638 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 75637 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 75578 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75577 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 75518 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgta 224 ||||||||||||||||||||||||||||||||| Sbjct: 75517 ccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 220 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 280 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 75362 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 151 gcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 402 bits (203), Expect = e-109 Identities = 210/213 (98%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 381841 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 381900 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 381901 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 381960 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381961 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 382020 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgta 224 ||||||||||||||||||||||||||||||||| Sbjct: 382021 ccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Plus Query: 220 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 280 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 382176 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 151 gcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 151 gcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 402 bits (203), Expect = e-109 Identities = 210/213 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113788 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 113729 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 113728 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 113669 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113668 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 113609 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgta 224 ||||||||||||||||||||||||||||||||| Sbjct: 113608 ccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 220 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 280 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 113453 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 151 gcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 402 bits (203), Expect = e-109 Identities = 210/213 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368470 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 368411 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 368410 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 368351 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368350 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 368291 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgta 224 ||||||||||||||||||||||||||||||||| Sbjct: 368290 ccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 402 bits (203), Expect = e-109 Identities = 210/213 (98%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 185075 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 185016 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 185015 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 184956 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184955 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 184896 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgta 224 ||||||||||||||||||||||||||||||||| Sbjct: 184895 ccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 220 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 280 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 368135 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 220 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 280 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 184740 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 151 gcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 389 bits (196), Expect = e-105 Identities = 300/325 (92%), Gaps = 14/325 (4%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 718 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 659 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| | Sbjct: 658 cttcggggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---ga 604 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 ||| |||||||||||||| |||||||||||||| || |||| ||| |||||||||||| Sbjct: 603 ctg-ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtag 552 Query: 192 ccagaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 492 Query: 251 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 491 ctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagc 432 Query: 311 ggttgagtgccgcaccctagatggc 335 ||| |||||| |||||||||||||| Sbjct: 431 ggtggagtgctgcaccctagatggc 407
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 353 bits (178), Expect = 2e-94 Identities = 203/210 (96%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 101 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 160 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 161 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 221 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 281 caatacaagcgttgtgctgctaggcgaagc 310 |||||||||||| ||||||||||||||||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagc 304
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 347 bits (175), Expect = 1e-92 Identities = 206/215 (95%), Gaps = 1/215 (0%) Strand = Plus / Minus Query: 121 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 180 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 181 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 241 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 301 taggcgaagcggttgagtgccgcaccctagatggc 335 |||||||||| || || ||| |||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggc 122
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 331 bits (167), Expect = 8e-88 Identities = 173/175 (98%) Strand = Plus / Plus Query: 136 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 195 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 196 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 256 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 310 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 191
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 309 bits (156), Expect = 3e-81 Identities = 166/170 (97%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 1560 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 1619 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1620 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaa 1679 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 181 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1680 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 307 bits (155), Expect = 1e-80 Identities = 240/269 (89%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||||| Sbjct: 143934 ggcttgcggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaaatg 143993 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| ||| Sbjct: 143994 cttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaa 144053 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 ||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 144054 ctgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtag 144113 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 || ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| |||| Sbjct: 144114 ccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcc 144173 Query: 252 taaaccgtgaaaacggggttgtgggagag 280 ||||||||||| ||||||||||||||||| Sbjct: 144174 taaaccgtgaagacggggttgtgggagag 144202 Score = 307 bits (155), Expect = 1e-80 Identities = 240/269 (89%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||||| Sbjct: 88917 ggcttgcggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaaatg 88858 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| ||| Sbjct: 88857 cttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaa 88798 Query: 132 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 191 ||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 88797 ctgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtag 88738 Query: 192 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 251 || ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| |||| Sbjct: 88737 ccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcc 88678 Query: 252 taaaccgtgaaaacggggttgtgggagag 280 ||||||||||| ||||||||||||||||| Sbjct: 88677 taaaccgtgaagacggggttgtgggagag 88649
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 299 bits (151), Expect = 3e-78 Identities = 218/241 (90%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 83 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 142 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 202 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 203 aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 262 Query: 259 t 259 | Sbjct: 263 t 263
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 295 bits (149), Expect = 5e-77 Identities = 240/271 (88%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| |||| ||||||||| | |||||||||||| Sbjct: 15 gggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaat 74 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| || Sbjct: 75 gcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgt 134 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||||||| Sbjct: 135 actacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagta 194 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| Sbjct: 195 gccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagc 254 Query: 251 ctaaaccgtgaaaacggggttgtgggagagc 281 |||||||| |||| ||||||||||||||||| Sbjct: 255 ctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 295 bits (149), Expect = 5e-77 Identities = 240/271 (88%) Strand = Plus / Minus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| |||| ||||||||| | |||||||||||| Sbjct: 125250 gggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaat 125191 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| || Sbjct: 125190 gcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgt 125131 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||||||| Sbjct: 125130 actacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagta 125071 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| Sbjct: 125070 gccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagc 125011 Query: 251 ctaaaccgtgaaaacggggttgtgggagagc 281 |||||||| |||| ||||||||||||||||| Sbjct: 125010 ctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 295 bits (149), Expect = 5e-77 Identities = 240/271 (88%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| |||| ||||||||| | |||||||||||| Sbjct: 94616 gggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaat 94675 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| || Sbjct: 94676 gcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgt 94735 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||||||| Sbjct: 94736 actacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagta 94795 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| Sbjct: 94796 gccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagc 94855 Query: 251 ctaaaccgtgaaaacggggttgtgggagagc 281 |||||||| |||| ||||||||||||||||| Sbjct: 94856 ctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 3e-75 Identities = 216/240 (90%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 186 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 || ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 187 aagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 246 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 306 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 307 aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 287 bits (145), Expect = 1e-74 Identities = 216/241 (89%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 69 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 70 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 129 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 189 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 190 aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 249 Query: 259 t 259 | Sbjct: 250 t 250
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 102 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 161 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 162 acaacctggcgaactgaaacat 183 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 102 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 161 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 162 acaacctggcgaactgaaacat 183 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 102 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 161 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 162 acaacctggcgaactgaaacat 183 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 102 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 161 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 162 acaacctggcgaactgaaacat 183 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 270 bits (136), Expect = 3e-69 Identities = 200/220 (90%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 116 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 175 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 176 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 235 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 236 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 295 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 296 gctgctaggcgaagcggttgagtgccgcaccctagatggc 335 || ||||||| ||||||| ||||| |||||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggc 3477 Score = 95.6 bits (48), Expect = 9e-17 Identities = 82/94 (87%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||| |||||||||||||| |||||||| |||||||||||| ||| |||||||||||| Sbjct: 3787 ggctggcggtggatacctatgcacccagagacgaggaagggcatagttagcgacgaaatg 3728 Query: 72 cttcggggagttgaaaataagcatagatccggag 105 |||| | |||||| |||||||| |||||| |||| Sbjct: 3727 cttcagagagttgcaaataagcgtagatcaggag 3694
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 268 bits (135), Expect = 1e-68 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaa-t 70 ||||| ||||||||||| |||||||||| ||||||||| |||||| ||||||||||| | Sbjct: 89867 ggcttacggtggataccaaggcacccagagacgaggaagagcgtagtaagcgacgaaaat 89808 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | Sbjct: 89807 gcttcggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttga 89748 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 89747 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttacta 89689 Query: 191 gccagaggaaaagaaagcaaa 211 ||||||||||||||||||||| Sbjct: 89688 gccagaggaaaagaaagcaaa 89668
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 268 bits (135), Expect = 1e-68 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaa-t 70 ||||| ||||||||||| |||||||||| ||||||||| |||||| ||||||||||| | Sbjct: 403 ggcttacggtggataccaaggcacccagagacgaggaagagcgtagtaagcgacgaaaat 462 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | Sbjct: 463 gcttcggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttga 522 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 523 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttacta 581 Query: 191 gccagaggaaaagaaagcaaa 211 ||||||||||||||||||||| Sbjct: 582 gccagaggaaaagaaagcaaa 602
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 266 bits (134), Expect = 4e-68 Identities = 134/134 (100%) Strand = Plus / Plus Query: 203 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 263 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 323 caccctagatggct 336 |||||||||||||| Sbjct: 121 caccctagatggct 134
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 262 bits (132), Expect = 6e-67 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 60 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 120 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 179 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 180 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 239 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 240 atgggagcagcctaaaccgt 259 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 261 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 320 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 321 cgcaccctagatgg 334 ||||||||||||| Sbjct: 6224 tgcaccctagatgg 6211
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 262 bits (132), Expect = 6e-67 Identities = 132/132 (100%) Strand = Plus / Plus Query: 205 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 265 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 325 ccctagatggct 336 |||||||||||| Sbjct: 121 ccctagatggct 132
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 262 bits (132), Expect = 6e-67 Identities = 132/132 (100%) Strand = Plus / Plus Query: 205 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 265 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 325 ccctagatggct 336 |||||||||||| Sbjct: 121 ccctagatggct 132
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 260 bits (131), Expect = 3e-66 Identities = 131/131 (100%) Strand = Plus / Plus Query: 206 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 266 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 326 cctagatggct 336 ||||||||||| Sbjct: 121 cctagatggct 131
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 260 bits (131), Expect = 3e-66 Identities = 131/131 (100%) Strand = Plus / Plus Query: 206 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 266 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 326 cctagatggct 336 ||||||||||| Sbjct: 124 cctagatggct 134
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 256 bits (129), Expect = 4e-65 Identities = 129/129 (100%) Strand = Plus / Plus Query: 208 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 268 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 328 tagatggct 336 ||||||||| Sbjct: 121 tagatggct 129
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 244 bits (123), Expect = 2e-61 Identities = 215/245 (87%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| ||||||||||||||| || ||| |||| ||||||||||| |||||||||||| Sbjct: 4048 gggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaat 4107 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||| ||||| | |||||||||||||||||||| ||| || |||| || Sbjct: 4108 gcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgt 4167 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||| ||||||||||| || | |||||| ||||||| ||||||||||||||||||| Sbjct: 4168 actgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagta 4226 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 4227 gccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagc 4286 Query: 251 ctaaa 255 ||||| Sbjct: 4287 ctaaa 4291
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 244 bits (123), Expect = 2e-61 Identities = 215/245 (87%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| ||||||||||||||| || ||| |||| ||||||||||| |||||||||||| Sbjct: 15 gggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaat 74 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||| ||||| | |||||||||||||||||||| ||| || |||| || Sbjct: 75 gcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgt 134 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||| ||||||||||| || | |||||| ||||||| ||||||||||||||||||| Sbjct: 135 actgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagta 193 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 194 gccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagc 253 Query: 251 ctaaa 255 ||||| Sbjct: 254 ctaaa 258
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 236 bits (119), Expect = 4e-59 Identities = 225/261 (86%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||| |||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 82 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| Sbjct: 83 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctg 142 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 143 taaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 202 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 || | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| Sbjct: 203 aataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccg 262 Query: 259 tgaaaacggggttgtgggaga 279 ||||| ||||||||||||||| Sbjct: 263 tgaaagcggggttgtgggaga 283
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 236 bits (119), Expect = 4e-59 Identities = 214/245 (87%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| ||||||||||||||| || ||| |||| ||||||||||| |||||||||||| Sbjct: 15 gggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaat 74 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||||||||| ||||| | |||||||||||||||||||| ||| || |||| || Sbjct: 75 gcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgt 134 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 |||||| ||||||| ||| || | |||||| ||||||| ||||||||||||||||||| Sbjct: 135 actgcc-gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagta 193 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 194 gccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagc 253 Query: 251 ctaaa 255 ||||| Sbjct: 254 ctaaa 258
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 220 bits (111), Expect = 2e-54 Identities = 223/261 (85%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||| |||| |||| ||||||||||| |||||||||||||||| ||| Sbjct: 3057 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgctttggg 3116 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| Sbjct: 3117 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctg 3176 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 3177 taaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 3236 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 || | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| Sbjct: 3237 aataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccg 3296 Query: 259 tgaaaacggggttgtgggaga 279 ||||| ||||||||||||||| Sbjct: 3297 tgaaagcggggttgtgggaga 3317
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 216 bits (109), Expect = 3e-53 Identities = 170/191 (89%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| |||||||||||||||||||||| |||| |||||||||| || |||||||| Sbjct: 716 gggcttacggtggatacctaggcacccagagacgaagaagggcgtactaaccgacgaaac 775 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||||||||||| |||||| |||||| ||||||||||||||| |||||| |||||| || | Sbjct: 776 gcttcggggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttga 835 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 836 acttcctgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagta 895 Query: 191 gccagaggaaa 201 ||||||||||| Sbjct: 896 gccagaggaaa 906
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 216 bits (109), Expect = 3e-53 Identities = 221/259 (85%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||| |||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtcagcgacgaaatgcttcggg 82 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 83 gagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacctg 142 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 143 tagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 202 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||| Sbjct: 203 aaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaaccg 262 Query: 259 tgaaaacggggttgtggga 277 |||| ||||||||||||| Sbjct: 263 cgaaagcggggttgtggga 281
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 214 bits (108), Expect = 1e-52 Identities = 213/246 (86%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| ||||||||||||||| || ||| |||| ||||||||||| ||||||||||| Sbjct: 15 gggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaac 74 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct-ttta 129 |||||||||||| ||||| | | ||||||||||||||||| ||| || |||| ||| Sbjct: 75 gcttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttg 134 Query: 130 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 189 |||||| ||||||| ||| ||| | |||||||||||||| |||||||||||||||||| Sbjct: 135 tactgcc-gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagt 193 Query: 190 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 249 | ||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 194 aaccagaggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaag 253 Query: 250 cctaaa 255 |||||| Sbjct: 254 cctaaa 259
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 200 bits (101), Expect = 2e-48 Identities = 210/247 (85%) Strand = Plus / Minus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| ||||||||||||||||| |||| |||| |||||||||| || |||||||| Sbjct: 115661 gggcttacggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaac 115602 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||| |||| || ||| || |||||| ||||||||||| ||| |||||| |||||| || | Sbjct: 115601 gctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttga 115542 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | ||||||| || || | ||||||||||||| ||| ||||||||||||||| Sbjct: 115541 actctccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagta 115482 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| Sbjct: 115481 gccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagt 115422 Query: 251 ctaaacc 257 ||||||| Sbjct: 115421 ctaaacc 115415 Score = 200 bits (101), Expect = 2e-48 Identities = 210/247 (85%) Strand = Plus / Plus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 |||||| ||||||||||||||||| |||| |||| |||||||||| || |||||||| Sbjct: 86327 gggcttacggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaac 86386 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 ||| |||| || ||| || |||||| ||||||||||| ||| |||||| |||||| || | Sbjct: 86387 gctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttga 86446 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| | ||||||| || || | ||||||||||||| ||| ||||||||||||||| Sbjct: 86447 actctccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagta 86506 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| Sbjct: 86507 gccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagt 86566 Query: 251 ctaaacc 257 ||||||| Sbjct: 86567 ctaaacc 86573
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 200 bits (101), Expect = 2e-48 Identities = 219/259 (84%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||| |||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 1849 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 1850 gagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacctg 1909 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 1910 tataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 1969 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 || | |||||||||||||||||| |||||| ||||||||||| |||| | |||||||||| Sbjct: 1970 aataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaaccg 2029 Query: 259 tgaaaacggggttgtggga 277 | ||| ||||||||||||| Sbjct: 2030 ttaaagcggggttgtggga 2048
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 190 bits (96), Expect = 2e-45 Identities = 206/241 (85%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctagaaacgatgaagggcgtagaaagcgacgaaatgcttcggt 485 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| || Sbjct: 486 taactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgcttg 542 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| || | |||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 543 ctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagagg 602 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 || |||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| Sbjct: 603 aacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccg 662 Query: 259 t 259 | Sbjct: 663 t 663
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 190 bits (96), Expect = 2e-45 Identities = 217/254 (85%), Gaps = 3/254 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| | || ||||||| || || || ||||||||||||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgcttcggg 80 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||| Sbjct: 81 gagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctg 139 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 || | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| |||||| Sbjct: 140 cttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagagg 197 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||| |||||||||| ||| || |||||| |||||| |||| |||| |||||||||||| Sbjct: 198 aaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccg 257 Query: 259 tgaaaacggggttg 272 |||| ||||||| Sbjct: 258 ctaaaatggggttg 271
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 184 bits (93), Expect = 1e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 47 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 105 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 106 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 165 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 166 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 226 tagcggcgagcgaaatgggagcagcctaaacc 257 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 182 bits (92), Expect = 5e-43 Identities = 204/240 (85%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||| ||| |||| ||||||||| | || | ||||||||||||||| Sbjct: 10 ggyggagacctaggcactcagagacgaagaagggcgtggaaaccaacgaaatgcttcggg 69 Query: 79 gagttgaaaataagc-atagatccggagattcccaaataggtcaaccttttaaactgcct 137 ||| || ||| |||| ||| |||||||||||||| |||||| |||||| || ||| ||| Sbjct: 70 gagctggaaacaagctata-atccggagattcccgaatagggcaacctcttgtactacct 128 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 ||||| ||| ||| ||||||||||| || ||| |||||||||||||||||| ||| Sbjct: 129 attgaattcatagataggaaagagacaacccggtgaattgaaacatcttagtagccggag 188 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 248
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 182 bits (92), Expect = 5e-43 Identities = 117/126 (92%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 24063487 ggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagagacgaaatg 24063428 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| || Sbjct: 24063427 ctttggggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaa 24063368 Query: 132 ctgcct 137 |||||| Sbjct: 24063367 ctgcct 24063362
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 182 bits (92), Expect = 5e-43 Identities = 117/126 (92%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 23991693 ggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagagacgaaatg 23991634 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| || Sbjct: 23991633 ctttggggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaa 23991574 Query: 132 ctgcct 137 |||||| Sbjct: 23991573 ctgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 182 bits (92), Expect = 5e-43 Identities = 117/126 (92%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 23909 ggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagagacgaaatg 23968 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| || Sbjct: 23969 ctttggggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaa 24028 Query: 132 ctgcct 137 |||||| Sbjct: 24029 ctgcct 24034
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 180 bits (91), Expect = 2e-42 Identities = 201/239 (84%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| ||||||||| |||| |||| |||||||||| || |||||||| ||| |||| Sbjct: 10 ggyggagacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccggg 69 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | | Sbjct: 70 aagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccg 129 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| || || | ||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 130 ctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagagg 189 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 190 aaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 178 bits (90), Expect = 8e-42 Identities = 96/98 (97%) Strand = Plus / Plus Query: 213 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 272 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 273 tgggagagcaatacaagcgttgtgctgctaggcgaagc 310 |||||||||||||||||||| ||||||||||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagc 98
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 172 bits (87), Expect = 5e-40 Identities = 120/129 (93%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 77 Query: 79 gagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcct 137 ||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| || Sbjct: 76 gagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-ct 18 Query: 138 gctgaatcc 146 ||||||||| Sbjct: 17 gctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 172 bits (87), Expect = 5e-40 Identities = 120/129 (93%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 130 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 71 Query: 79 gagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcct 137 ||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| || Sbjct: 70 gagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-ct 12 Query: 138 gctgaatcc 146 ||||||||| Sbjct: 11 gctgaatcc 3
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 170 bits (86), Expect = 2e-39 Identities = 201/240 (83%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||||| || |||| ||||||||| | | |||||| | ||| |||| Sbjct: 10 ggtggatacctaggcacctagagacgaagaagggcgtcactaccgacgatacgctccggg 69 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || || ||||| | ||||||||||||||| ||| || |||||| ||| |||| Sbjct: 70 gagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccctg 129 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| ||||| |||| |||| || |||||||||||||||||||||| |||| Sbjct: 130 ctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggagg 189 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 190 aaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 170 bits (86), Expect = 2e-39 Identities = 102/108 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 93 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 152 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggt 119 ||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 153 cttcgtggagttgaaaataagcatagatccggagattcccgaataggt 200
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 167 bits (84), Expect = 3e-38 Identities = 104/110 (94%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 77 Query: 79 gagttgaaaataagcatagatccggagattccc-aaataggtcaaccttt 127 ||||||||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 76 gagttgaaaataagcgtagatccggagattcccgatataggtcaaccttt 27
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 165 bits (83), Expect = 1e-37 Identities = 227/274 (82%), Gaps = 10/274 (3%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 139254 ggcttacggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac--aatg 139197 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||| || | |||||||||||||||||||| ||| ||| ||| |||| || || Sbjct: 139196 cttcgggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaa 139137 Query: 132 ctgcctgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatctta 187 ||||| ||||||||| | || |||||||| ||| ||||||| |||||||| | Sbjct: 139136 ctgcc----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaa 139081 Query: 188 gtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagc 247 ||||| | |||| |||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 139080 atagccgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagt 139021 Query: 248 agcctaaaccgtgaaaacggggttgtgggagagc 281 ||||||||||||| ||||||||||||||||||| Sbjct: 139020 agcctaaaccgtgggaacggggttgtgggagagc 138987 Score = 165 bits (83), Expect = 1e-37 Identities = 227/274 (82%), Gaps = 10/274 (3%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 82623 ggcttacggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac--aatg 82680 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 ||||||| || | |||||||||||||||||||| ||| ||| ||| |||| || || Sbjct: 82681 cttcgggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaa 82740 Query: 132 ctgcctgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatctta 187 ||||| ||||||||| | || |||||||| ||| ||||||| |||||||| | Sbjct: 82741 ctgcc----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaa 82796 Query: 188 gtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagc 247 ||||| | |||| |||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 82797 atagccgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagt 82856 Query: 248 agcctaaaccgtgaaaacggggttgtgggagagc 281 ||||||||||||| ||||||||||||||||||| Sbjct: 82857 agcctaaaccgtgggaacggggttgtgggagagc 82890
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 165 bits (83), Expect = 1e-37 Identities = 198/237 (83%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 ||||||||||| || ||| ||| ||||||||||| | |||||| | ||||||||||| Sbjct: 13 ggatacctagggactcagagtcgatgaagggcgtagttaccgacgatacgcttcggggag 72 Query: 82 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 141 || || |||| | |||||| |||||||| |||||| ||||||| || ||| |||| || Sbjct: 73 ctggaatcaagctttgatccgaagattcccgaatagggcaaccttatatacttcctgttg 132 Query: 142 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 201 ||| ||| |||| ||||||||||| |||||| |||||||||||||||||| | ||||| Sbjct: 133 aattcatagacaggtaagagacaacccggcgaattgaaacatcttagtagccggtggaaa 192 Query: 202 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||| ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 193 agaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 163 bits (82), Expect = 4e-37 Identities = 216/255 (84%), Gaps = 6/255 (2%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 ||||||||||||||||||||| | || ||||||| || || || ||||||||| ||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgctttggg 80 Query: 79 gagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcct 137 ||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| | Sbjct: 81 gagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc-t 137 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 ||| | |||||| |||| ||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 138 gcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagag 195 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| | Sbjct: 196 gaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatc 255 Query: 258 gtgaaaacggggttg 272 | |||| ||||||| Sbjct: 256 gctaaaatggggttg 270
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 161 bits (81), Expect = 2e-36 Identities = 183/217 (84%) Strand = Plus / Plus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 101 |||| ||||||||| | || |||||||| |||||| |||| || ||| ||||| ||| | Sbjct: 26 acgatgaagggcgtggaaaccgacgaaacgcttcgaggagctggaaacaagcaatgattc 85 Query: 102 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 161 |||||||||| |||||| |||||| || ||| ||| ||||| ||| ||| ||||| Sbjct: 86 ggagattcccgaatagggcaacctcttgtacttccttttgaattcatagaaaggaaagag 145 Query: 162 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 221 |||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 146 acaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattccc 205 Query: 222 gtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||||| ||||| ||| |||||||| Sbjct: 206 gtagtagcggcgagcgaactgggaacagtctaaaccg 242
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 159 bits (80), Expect = 7e-36 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| ||| ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggtcgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 159 bits (80), Expect = 7e-36 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 159 bits (80), Expect = 7e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 155 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 214 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 215 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 77.8 bits (39), Expect = 2e-11 Identities = 76/89 (85%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||| | || |||||||||||||| | | ||||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagagacgaggaagggcgtggttaccgacgaaatgcttcggg 82 Query: 79 gagttgaaaataagcatagatccggagat 107 |||||| ||| | || |||||||||||| Sbjct: 83 gagttggaaagaggctgagatccggagat 111
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 157 bits (79), Expect = 3e-35 Identities = 92/97 (94%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 97 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 38 Query: 72 cttcggggagttgaaaataagcatagatccggagatt 108 |||||||||||||||||||||| |||||||||||||| Sbjct: 37 cttcggggagttgaaaataagcgtagatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 157 bits (79), Expect = 3e-35 Identities = 92/97 (94%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 97 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 38 Query: 72 cttcggggagttgaaaataagcatagatccggagatt 108 |||||||||||||||||||||| |||||||||||||| Sbjct: 37 cttcggggagttgaaaataagcgtagatccggagatt 1
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 155 bits (78), Expect = 1e-34 Identities = 78/78 (100%) Strand = Plus / Plus Query: 211 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 62 Query: 271 tgtgggagagcaatacaa 288 |||||||||||||||||| Sbjct: 63 tgtgggagagcaatacaa 80
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 155 bits (78), Expect = 1e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 224 agtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 153 bits (77), Expect = 4e-34 Identities = 119/131 (90%), Gaps = 2/131 (1%) Strand = Plus / Plus Query: 23 gatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 82 ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 240 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 299 Query: 83 tgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcctgctg 141 ||||||| ||| ||||||||||||||||| | |||||||||||||| ||||| |||||| Sbjct: 300 tgaaaatcagcgtagatccggagattcccgatataggtcaacctttcgaactg-ctgctg 358 Query: 142 aatccatgagc 152 || ||| |||| Sbjct: 359 aacccacgagc 369
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 192/226 (84%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 246 || |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 192/226 (84%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 246 || |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 2e-33 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 81 |||||||||||||||||| || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 82 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 140 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 141 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 200 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 201 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 254 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 151 bits (76), Expect = 2e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 158 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 217 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 218 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 207 tcccgtagtagcggcgagcgaaacggggccagcctaaacc 246
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 151 bits (76), Expect = 2e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 62 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 121 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 122 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 181 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 182 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 241 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 242 gggagcagcctaaacc 257 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 149 bits (75), Expect = 7e-33 Identities = 197/239 (82%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||||||| |||| |||||||| | | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgaagaagggcgcaaataccggcgaaacgcttcggg 62 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || ||| ||| | |||||| |||| ||| |||||| |||||| | ||| ||| Sbjct: 63 gagctggcaatgagctttgatccgaagatccccgaatagggcaacctctagcactacctc 122 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 | ||| ||| | |||||||||| |||| || |||||||||||||| ||||||| |||| Sbjct: 123 cataattcatagggaggcaagagagaacccggtgaactgaaacatctaagtagccggagg 182 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 183 aaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 66 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 124 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 125 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 184 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 185 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 244 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 245 agcagcctaa 254 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 217 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 69.9 bits (35), Expect = 5e-09 Identities = 88/107 (82%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||||||| |||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtggaaaccgacgaaacgcttcggg 69 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 125 || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 70 aagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 147 bits (74), Expect = 3e-32 Identities = 192/232 (82%) Strand = Plus / Plus Query: 26 acctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 85 |||||||||| ||| |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 87 Query: 86 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 145 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 88 caacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaatt 147 Query: 146 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 205 ||| ||| |||||| |||| | |||||||||||||| |||||| ||||||||||| Sbjct: 148 catatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaagaa 207 Query: 206 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 147 bits (74), Expect = 3e-32 Identities = 192/232 (82%) Strand = Plus / Plus Query: 26 acctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 85 |||||||||| ||| |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 87 Query: 86 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 145 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 88 caacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaatt 147 Query: 146 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 205 ||| ||| |||||| |||| | |||||||||||||| |||||| ||||||||||| Sbjct: 148 catatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaagaa 207 Query: 206 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 217 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 217 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 60.0 bits (30), Expect = 5e-06 Identities = 97/120 (80%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| ||||||| |||||||||| ||| |||| |||||||| || | || ||| | | Sbjct: 156286 ggcttacggtggagacctaggcactcagagacgatgaagggcgcagataccggcgatacg 156227 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156226 cttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 60.0 bits (30), Expect = 5e-06 Identities = 97/120 (80%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| ||||||| |||||||||| ||| |||| |||||||| || | || ||| | | Sbjct: 77606 ggcttacggtggagacctaggcactcagagacgatgaagggcgcagataccggcgatacg 77665 Query: 72 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 131 |||||||||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77666 cttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 145 bits (73), Expect = 1e-31 Identities = 200/241 (82%), Gaps = 2/241 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||| ||| |||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcactcagagacgatgaagggcgtggtaaccgacgaaacgcttcggg 69 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 70 gagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctta 129 Query: 139 ctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || ||| Sbjct: 130 gtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccggag 188 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 248 Query: 258 g 258 | Sbjct: 249 g 249
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 145 bits (73), Expect = 1e-31 Identities = 77/79 (97%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2511 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 2570 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2571 cttcggggagttgaaaata 2589
>gb|DQ001731.1| Secale cereale voucher P.M. McNutt 006 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2582 Score = 145 bits (73), Expect = 1e-31 Identities = 77/79 (97%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2504 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 2563 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2564 cttcggggagttgaaaata 2582
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 224 agtagcggcgagcgaaatgggagcagcctaaac 256 |||||||||||||||| |||| |||||||||| Sbjct: 188212 agtagcggcgagcgaagcgggaacagcctaaac 188244 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 224 agtagcggcgagcgaaatgggagcagcctaaac 256 |||||||||||||||| |||| |||||||||| Sbjct: 149769 agtagcggcgagcgaagcgggaacagcctaaac 149801 Score = 46.1 bits (23), Expect = 0.072 Identities = 50/59 (84%) Strand = Plus / Plus Query: 47 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 105 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188035 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 188093 Score = 46.1 bits (23), Expect = 0.072 Identities = 50/59 (84%) Strand = Plus / Plus Query: 47 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 105 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 149592 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 149650
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 224 agtagcggcgagcgaaatgggagcagcctaaac 256 |||||||||||||||| |||| |||||||||| Sbjct: 189135 agtagcggcgagcgaagcgggaacagcctaaac 189167 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 224 agtagcggcgagcgaaatgggagcagcctaaac 256 |||||||||||||||| |||| |||||||||| Sbjct: 150562 agtagcggcgagcgaagcgggaacagcctaaac 150594 Score = 46.1 bits (23), Expect = 0.072 Identities = 50/59 (84%) Strand = Plus / Plus Query: 47 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 105 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188958 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 189016 Score = 46.1 bits (23), Expect = 0.072 Identities = 50/59 (84%) Strand = Plus / Plus Query: 47 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 105 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 150385 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 150443
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 143 bits (72), Expect = 4e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 224 agtagcggcgagcgaaatgggagcagcctaaa 255 ||||||||||||||||| |||| ||||||||| Sbjct: 208 agtagcggcgagcgaaacgggaacagcctaaa 239 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 47 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 106 ||||||||| | || | |||||||||||||||||| || ||| |||| |||||||||| Sbjct: 31 gaagggcgtggaaaccaacgaaatgcttcggggagctggaaacaagctacgatccggaga 90 Query: 107 ttcccaaataggtcaacc 124 ||||| ||| || ||||| Sbjct: 91 ttcccgaatggggcaacc 108
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 143 bits (72), Expect = 4e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 224 agtagcggcgagcgaaatgggagcagcctaaa 255 ||||||||||||||||| |||| ||||||||| Sbjct: 2089 agtagcggcgagcgaaacgggaacagcctaaa 2120 Score = 65.9 bits (33), Expect = 8e-08 Identities = 88/107 (82%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgg 77 |||||||||||||||||| || ||| ||||||||| | || | |||||||||||||| Sbjct: 1883 cggtggatacctaggcacttagagtcgatgaagggcgtggaaaccaacgaaatgcttcgg 1942 Query: 78 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 124 |||| || ||| |||| ||||||||||||||| ||| || ||||| Sbjct: 1943 ggagctggaaacaagctacgatccggagattcccgaatggggcaacc 1989
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 141 bits (71), Expect = 2e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 163 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 222 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 223 tagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||| |||| ||||||||||| Sbjct: 227 cagtagcggcgagcgaaaagggaacagcctaaacc 261
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 224 agtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||| |||| ||||||||||| Sbjct: 1752 agtagcggcgagcgaaaagggaacagcctaaacc 1785 Score = 44.1 bits (22), Expect = 0.28 Identities = 53/64 (82%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgg 77 |||||||||||||||||| | | ||| ||||| ||||| | |||||||| ||||||| Sbjct: 1546 cggtggatacctaggcacacggaagcgaagaaggacgtagttaccgacgaaacgcttcgg 1605 Query: 78 ggag 81 |||| Sbjct: 1606 ggag 1609
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 139 bits (70), Expect = 6e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 217 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 139 bits (70), Expect = 6e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 217 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 224 agtagcggcgagcgaaatgggagcagcctaaacc 257 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Plus Query: 42 acgaggaagggcgtagcaagcgacgaaatgcttcgg 77 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 224 agtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||| |||| ||||||||||| Sbjct: 2334597 agtagcggcgagcgaaaggggaacagcctaaacc 2334564 Score = 44.1 bits (22), Expect = 0.28 Identities = 71/88 (80%) Strand = Plus / Minus Query: 18 cggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgg 77 |||||||||||||||||| ||| ||| ||||| ||| | | |||||| | ||||||| Sbjct: 2334801 cggtggatacctaggcacacagaggcgatgaaggacgtggataccgacgatacgcttcgg 2334742 Query: 78 ggagttgaaaataagcatagatccggag 105 |||| || ||| |||| | ||||||||| Sbjct: 2334741 ggagctggaaacaagctttgatccggag 2334714
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 164 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 223 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 224 agtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||||||| |||| ||||||||||| Sbjct: 1778 agtagcggcgagcgaaaagggaacagcctaaacc 1811
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 139 bits (70), Expect = 6e-30 Identities = 198/240 (82%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcgg 77 ||||||||||||||||| | || |||| ||||||||| | || | ||||||||||||| Sbjct: 122 cggtggatacctaggcatctagagacgatgaagggcgtggaaaccaacgaaatgcttcga 181 Query: 78 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 137 |||| || ||| |||| ||| ||||||||||| |||||| |||||||||| ||| ||| Sbjct: 182 ggagctggaaacaagctatgattcggagattcccgaatagggcaaccttttatactacct 241 Query: 138 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 197 ||||| ||| ||| ||||||||||| | ||| |||||||||||||||| ||| Sbjct: 242 attgaattcatagataggaaagagacaacccagtgaag-gaaacatcttagtagctggag 300 Query: 198 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 301 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 137 bits (69), Expect = 3e-29 Identities = 76/79 (96%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2616 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 2675 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2676 cttcggggagttgaaaata 2694
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 137 bits (69), Expect = 3e-29 Identities = 76/79 (96%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2643 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 2702 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2703 cttcggggagttgaaaata 2721
>dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E04, full insert sequence Length = 986 Score = 137 bits (69), Expect = 3e-29 Identities = 76/79 (96%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 7 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 66 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 67 cttcggggagttgaaaata 85
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 163 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 222 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 223 tagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 gctaggcgaagcggttgagtgccgcacc 326 ||||| |||||||||||||| ||||||| Sbjct: 287 gctagacgaagcggttgagttccgcacc 314
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 163 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 222 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 223 tagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 48.1 bits (24), Expect = 0.018 Identities = 61/74 (82%) Strand = Plus / Plus Query: 8 gaggggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacga 67 ||||||||| ||||||||||||||||| ||| ||| ||||||||| | |||||| Sbjct: 12 gaggggcttacggtggatacctaggcattcagaggcgaagaagggcgtcgtggccgacga 71 Query: 68 aatgcttcggggag 81 |||||| ||||||| Sbjct: 72 aatgctccggggag 85 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 gctaggcgaagcggttgagtgccgcacc 326 ||||| |||||||||||||| ||||||| Sbjct: 300 gctagacgaagcggttgagttccgcacc 327
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 163 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 222 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 223 tagtagcggcgagcgaaatgggagcagcctaaaccg 258 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 48.1 bits (24), Expect = 0.018 Identities = 61/74 (82%) Strand = Plus / Plus Query: 8 gaggggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacga 67 ||||||||| ||||||||||||||||| ||| ||| ||||||||| | |||||| Sbjct: 4586 gaggggcttacggtggatacctaggcattcagaggcgaagaagggcgtcgtggccgacga 4645 Query: 68 aatgcttcggggag 81 |||||| ||||||| Sbjct: 4646 aatgctccggggag 4659 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 gctaggcgaagcggttgagtgccgcacc 326 ||||| |||||||||||||| ||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcacc 4901
>gb|AF141151.1|AF141151 Vigna unguiculata clone VU124KNF1-1 16S ribosomal RNA gene, partial sequence and 18S ribosomal RNA gene, partial sequence Length = 345 Score = 135 bits (68), Expect = 1e-28 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 23 gatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 82 |||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| Sbjct: 229 gatacctaggcacccatagacgaggaagggcgtagtaagcgacgaaatgctttggggagt 288 Query: 83 tgaaaataagcatagatccggagattccc-aaataggtcaaccttt 127 ||||||| ||| ||||||||||||||||| | |||||||||||||| Sbjct: 289 tgaaaatcagcgtagatccggagattcccgatataggtcaaccttt 334
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 133 bits (67), Expect = 4e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 151 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 210 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 211 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 270 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 271 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 330 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 331 a 331 | Sbjct: 325 a 325
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 133 bits (67), Expect = 4e-28 Identities = 195/239 (81%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||||||| |||| |||||||| || | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgatgaagggcgcagataccggcgaaacgcttcggg 62 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 ||| || || ||||||||||||| |||| ||| |||||| |||||| ||||| || Sbjct: 63 gagctggcaacaagcatagatccgaagatccccgaatagggcaacctgcaaaactaccaa 122 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 | ||| ||| || || |||||| |||| | ||| ||||||||||||||||| | || Sbjct: 123 caaaattcataagttggaaagagagaacccagtgaattgaaacatcttagtagctggtgg 182 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 183 aaaagaaagcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 241
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 133 bits (67), Expect = 4e-28 Identities = 195/239 (81%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 || ||| |||||||||||||| |||| |||||||| || | || ||||| ||| |||| Sbjct: 3 ggyggagacctaggcacccagagacgaagaagggcgcagataccggcgaaacgctccggg 62 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||| || || | | ||||||||||| ||| |||||| |||||| | |||| || Sbjct: 63 gagttggcaacaaactttgatccggagatccccgaatagggcaacctgtacaacttccaa 122 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 | |||| ||| || || ||||| ||||| | ||| ||||||||||||||||| |||| Sbjct: 123 cagaattcataagttggaaagaggcaacccagtgaattgaaacatcttagtagctggagg 182 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 257 ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 183 aaaagaaagcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 241
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 131 bits (66), Expect = 2e-27 Identities = 196/240 (81%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||||||| || |||||||| | || || ||||| |||||||| Sbjct: 136496 ggtggatacctaggcacccaaagttgatgaagggcgcggaaaccggcgaaacgcttcggg 136555 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 136556 gagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccga 136615 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | |||| Sbjct: 136616 ctgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggagg 136675 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 136676 aaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaaccg 136735 Score = 131 bits (66), Expect = 2e-27 Identities = 196/240 (81%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 78 |||||||||||||||||||| || |||||||| | || || ||||| |||||||| Sbjct: 49048 ggtggatacctaggcacccaaagttgatgaagggcgcggaaaccggcgaaacgcttcggg 48989 Query: 79 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 138 |||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 48988 gagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccga 48929 Query: 139 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 198 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | |||| Sbjct: 48928 ctgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggagg 48869 Query: 199 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 258 ||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 48868 aaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaaccg 48809
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 176 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 235 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 236 cgaaatgggagcagcctaaacc 257 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241
>dbj|AK109207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C10, full insert sequence Length = 777 Score = 131 bits (66), Expect = 2e-27 Identities = 73/76 (96%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 6 ggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatg 65 Query: 72 cttcggggagttgaaa 87 |||||||||||||||| Sbjct: 66 cttcggggagttgaaa 81
>gb|M21453.1|SPICPRGDG Spinach chloroplast 16S ribosomal RNA gene (3' end), Ile-tRNA and Ala-tRNA genes, and 23S ribosomal RNA gene (5' end) Length = 2391 Score = 131 bits (66), Expect = 2e-27 Identities = 85/92 (92%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2300 ggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatg 2359 Query: 72 cttcggggagttgaaaataagcatagatccgg 103 ||||||||||||||||||||||| |||||||| Sbjct: 2360 cttcggggagttgaaaataagcagagatccgg 2391
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 129 bits (65), Expect = 6e-27 Identities = 201/247 (81%) Strand = Plus / Minus Query: 11 gggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaat 70 ||||||| |||||||||||||||| || ||| ||||||||| | | | ||||||| Sbjct: 27819 gggcttgtggtggatacctaggcatttagaagcgatgaagggcgtgactaccaacgaaat 27760 Query: 71 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 130 |||||| |||| || || ||||| | ||| ||||| | ||| ||| | ||| |||| Sbjct: 27759 gcttcgaggagctggaagtaagctttgattcggaggtgcccgaatgaggaaactctttat 27700 Query: 131 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 190 ||| ||| |||||| ||| || ||||||||| ||| ||||||||||||||||||||||| Sbjct: 27699 actacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatcttagta 27640 Query: 191 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 250 |||| |||||||||||||||| ||||||| | |||||| ||||| ||||| |||| |||| Sbjct: 27639 gccaaaggaaaagaaagcaaacgcgattctcttagtagtggcgaacgaaaagggaacagc 27580 Query: 251 ctaaacc 257 ||||||| Sbjct: 27579 ctaaacc 27573
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 129 bits (65), Expect = 6e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 157 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 216 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 217 ttcccgtagtagcggcgagcgaaatggga 245 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|DQ001754.1| Citrus reticulata voucher P.M. McNutt 019 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2728 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2650 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2709 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2710 cttcggggagttgaaaata 2728
>gb|DQ001752.1| Salix nigra voucher P.M. McNutt 003 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2691 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2613 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2672 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2673 cttcggggagttgaaaata 2691
>gb|DQ001751.1| Rosa hybrid cultivar voucher P.M. McNutt 017 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2503 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2562 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2563 cttcggggagttgaaaata 2581
>gb|DQ001750.1| Cucurbita pepo voucher P.M. McNutt 025 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2503 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2562 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2563 cttcggggagttgaaaata 2581
>gb|DQ001749.1| Cucurbita pepo voucher P.M. McNutt 015 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2578 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2500 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2559 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2560 cttcggggagttgaaaata 2578
>gb|DQ001748.1| Fragaria vesca voucher P.M. McNutt 020 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2737 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2659 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2718 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2719 cttcggggagttgaaaata 2737
>gb|DQ001742.1| Daucus carota voucher P.M. McNutt 005 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2698 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2620 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2679 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2680 cttcggggagttgaaaata 2698
>gb|DQ001741.1| Dahlia hybrid cultivar voucher P.M. McNutt 007 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2554 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2476 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2535 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2536 cttcggggagttgaaaata 2554
>gb|DQ001740.1| Helianthus annuus voucher P.M. McNutt 021 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2551 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2473 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2532 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2533 cttcggggagttgaaaata 2551
>gb|DQ001739.1| Lactuca sativa voucher P.M. McNutt 016 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2639 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2698 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2699 cttcggggagttgaaaata 2717
>gb|DQ001738.1| Lactuca sativa voucher P.M. McNutt 004 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2635 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2694 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2695 cttcggggagttgaaaata 2713
>gb|DQ001735.1| Lemna gibba voucher P.M. McNutt 008 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2510 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2432 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatg 2491 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2492 cttcggggagttgaaaata 2510
>gb|DQ001734.1| Dracaena sanderiana voucher P.M. McNutt 011 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 129 bits (65), Expect = 6e-27 Identities = 75/79 (94%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagnnacgaggaagggcgtagcaagcgacgaaatg 71 ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 2635 ggcttacggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatg 2694 Query: 72 cttcggggagttgaaaata 90 ||||||||||||||||||| Sbjct: 2695 cttcggggagttgaaaata 2713
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 170 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 229 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 161 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 220 Query: 230 ggcgagcgaaatgggagcagcctaaacc 257 |||||||||||||||| ||||||||||| Sbjct: 221 ggcgagcgaaatgggaacagcctaaacc 248 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,353,065 Number of Sequences: 3902068 Number of extensions: 2353065 Number of successful extensions: 61133 Number of sequences better than 10.0: 4571 Number of HSP's better than 10.0 without gapping: 4480 Number of HSP's successfully gapped in prelim test: 113 Number of HSP's that attempted gapping in prelim test: 52163 Number of HSP's gapped (non-prelim): 8436 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
