ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2h17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA Length = 1474 Score = 472 bits (238), Expect = e-130 Identities = 310/330 (93%), Gaps = 3/330 (0%) Strand = Plus / Minus Query: 293 ccaccttcccacgccggcgatcagcaccgaggggcgctcctgcgcgaggccatgtcgacg 352 |||||||||||||| | ||||||||| || ||| |||||||||||||||||||||||||| Sbjct: 612 ccaccttcccacgctgccgatcagcagcgggggccgctcctgcgcgaggccatgtcgacg 553 Query: 353 cccgtgctgatggccacagcggaccaggcactggtggaggttgaaggacacttccagctt 412 ||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 552 cccgtgctgatggtcacagcggagcaggcgctggtggaggttgaaggccactttcagct- 494 Query: 413 cgtgtcaggcctcccggttgtcgacagcgcccgccgatgtgtcggggtcgtcgtcaagag 472 |||||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||| Sbjct: 493 cgtgtcaggcctcccggttgtcgacagcgctcgcagatgcgtcggggtcgtcgtgaagag 434 Query: 473 cgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctcc 532 |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 433 cgattgcgcgagggcttcacatgggccaaagacgaagattgcagatgtgatgacatctcc 374 Query: 533 agcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctgatgctcaaga 592 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 373 agcaatcacgctatcatgcgat-aaaacagtgaccgatgccgcagctctgatgctcaaga 315 Query: 593 agaagatccacagattacccgatagtaaac 622 ||||||||||||||||| |||||||||||| Sbjct: 314 agaagatccacagatta-ccgatagtaaac 286 Score = 377 bits (190), Expect = e-101 Identities = 231/244 (94%), Gaps = 3/244 (1%) Strand = Plus / Minus Query: 25 agcatccatggcgtgcatcaataccttgcagagctgctccatgttcaagggggccaaggc 84 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 874 agcatccatggcgtgcatcaataccttgcagagctgctccatgttcaaaggggccaaggc 815 Query: 85 cgaggccagaaggggcagcagagccggcagcggcgggagcttcgggtgccgggcctccac 144 |||||||||||||||| |||| | ||| |||||||||||||||||||| ||||| Sbjct: 814 tgaggccagaaggggcaa---agccaccggcgcagggagcttcgggtgccgggcgtccac 758 Query: 145 gttcatggacgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctc 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gttcatggacgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctc 698 Query: 205 cggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacctcca 264 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 697 cggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcctacctcca 638 Query: 265 gtcc 268 |||| Sbjct: 637 gtcc 634
>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA Length = 1061 Score = 468 bits (236), Expect = e-128 Identities = 305/324 (94%), Gaps = 3/324 (0%) Strand = Plus / Plus Query: 299 tcccacgccggcgatcagcaccgaggggcgctcctgcgcgaggccatgtcgacgcccgtg 358 ||||| |||||||||||||| || ||| | |||||||| ||||||||||||||||||||| Sbjct: 302 tcccatgccggcgatcagcagcgggggcctctcctgcgtgaggccatgtcgacgcccgtg 361 Query: 359 ctgatggccacagcggaccaggcactggtggaggttgaaggacacttccagcttcgtgtc 418 ||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 362 ctgatggtcacagcggagcaggcgctggtggaggttgaaggccacttccagct-cgtgtc 420 Query: 419 aggcctcccggttgtcgacagcgcccgccgatgtgtcggggtcgtcgtcaagagcgatcg 478 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggcctcccggttgtcgacagtgcccgccgatgtgtcggggtcgtcgtcaagagcgatca 480 Query: 479 cgcgagggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaat 538 || |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 481 cgtgagggcttcacatgggccaaagacgaagattgcagatgtgatgacatctccagcaat 540 Query: 539 cacgctatcatgcgataaaaacagtgaccgatgccgcagctctgatgctcaagaagaaga 598 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 541 cacgctatcatgcgat-aaaacagtgaccgatgccgcagctctgatgctcaggaagaaga 599 Query: 599 tccacagattacccgatagtaaac 622 ||||||||||| |||||||||||| Sbjct: 600 tccacagatta-ccgatagtaaac 622 Score = 317 bits (160), Expect = 2e-83 Identities = 224/244 (91%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 24 tagcatccatggcgtgcatcaataccttgcagagctgctccatgttcaagggggccaagg 83 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 36 tagcatccatggcgtgcatcaataccttgcagagctgctccatgttcaaaggggccaaga 95 Query: 84 ccgaggccagaaggggcagcagagccggcagcggcgggagcttcgggtgccgggcctcca 143 |||||||||| || || |||| || ||||||| ||| | ||||||||| |||| Sbjct: 96 gtaaggccagaagaggtag---agcc---agtggcgggacctttgagtgccgggcgtcca 149 Query: 144 cgttcatggacgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatct 203 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150 cgttcatggacgggagcgggctccggctcgggctcgacgagaaccccgatgccatcatct 209 Query: 204 ccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacctcc 263 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 ccggggagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacctcc 269 Query: 264 agtc 267 |||| Sbjct: 270 agtc 273
>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2 mRNA Length = 916 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 260 cgatctccgcgcctacctccagtc 283 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 457 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 516 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 517 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 575 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 576 atgctaaagaagaagatccacagattacc 604
>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2 mRNA Length = 1002 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 260 cgatctccgcgcctacctccagtc 283 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 457 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 516 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 517 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 575 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 576 atgctaaagaagaagatccacagattacc 604
>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2 mRNA Length = 956 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 149 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 205 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 206 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 265 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 266 cgatctccgcgcctacctccagtc 289 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 463 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 522 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 523 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 581 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 582 atgctaaagaagaagatccacagattacc 610
>ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 251 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 252 cgatctccgcgcctacctccagtc 275 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 449 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 508 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 509 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 567 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 568 atgctaaagaagaagatccacagattacc 596
>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced resistance protein 1 (Bi1) mRNA, complete cds Length = 1098 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 401 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 457 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 458 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 517 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 518 cgatctccgcgcctacctccagtc 541 Score = 115 bits (58), Expect = 2e-22 Identities = 129/150 (86%), Gaps = 2/150 (1%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 715 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 774 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 775 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 833 Query: 583 atgctcaagaagaa-gatccacagattacc 611 ||||| |||||||| ||||||||||||||| Sbjct: 834 atgctaaagaagaaggatccacagattacc 863
>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper susceptibility protein Hd002A mRNA, complete cds Length = 1265 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 567 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 623 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 624 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 683 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 684 cgatctccgcgcctacctccagtc 707 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 881 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 940 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 941 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 999 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 1000 atgctaaagaagaagatccacagattacc 1028
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 35110983 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 35111039 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 35111040 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 35111099 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 35111100 cgatctccgcgcctacctccagtc 35111123 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 568 gatgccgcagctctgatgctcaagaagaagatccacagattacc 611 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 35111716 gatgcggcagctctgatgctaaagaagaagatccacagattacc 35111759 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 497 gtcaaggacgaagattgcagatgtgatgacatctccagcaatcac 541 ||||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 35111556 gtcaaagacgaagattgcagaagtgatgacctctccagccatcac 35111600 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 196 catcatctccggcgagtggcccgagaacttctccctc 232 |||| ||||||||||||||| ||| |||||||||||| Sbjct: 8855051 catcgtctccggcgagtggctcgataacttctccctc 8855087
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 6339 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 6395 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 6396 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 6455 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 6456 cgatctccgcgcctacctccagtc 6479 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 568 gatgccgcagctctgatgctcaagaagaagatccacagattacc 611 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 7072 gatgcggcagctctgatgctaaagaagaagatccacagattacc 7115 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 497 gtcaaggacgaagattgcagatgtgatgacatctccagcaatcac 541 ||||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 6912 gtcaaagacgaagattgcagaagtgatgacctctccagccatcac 6956
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 84146 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 84202 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 84203 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 84262 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 84263 cgatctccgcgcctacctccagtc 84286 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 568 gatgccgcagctctgatgctcaagaagaagatccacagattacc 611 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 84879 gatgcggcagctctgatgctaaagaagaagatccacagattacc 84922 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 497 gtcaaggacgaagattgcagatgtgatgacatctccagcaatcac 541 ||||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 84719 gtcaaagacgaagattgcagaagtgatgacctctccagccatcac 84763
>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full insert sequence Length = 833 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 251 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 252 cgatctccgcgcctacctccagtc 275 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 449 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 508 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 509 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 567 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 568 atgctaaagaagaagatccacagattacc 596
>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full insert sequence Length = 994 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 251 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 252 cgatctccgcgcctacctccagtc 275 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 449 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 508 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 509 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 567 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 568 atgctaaagaagaagatccacagattacc 596
>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full insert sequence Length = 1002 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 260 cgatctccgcgcctacctccagtc 283 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 457 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 516 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 517 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 575 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 576 atgctaaagaagaagatccacagattacc 604
>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full insert sequence Length = 1514 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 136 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 192 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 193 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 252 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 253 cgatctccgcgcctacctccagtc 276 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 450 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 509 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 510 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 568 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 569 atgctaaagaagaagatccacagattacc 597
>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full insert sequence Length = 4217 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Minus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 3207 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 3151 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 3150 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 3091 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 3090 cgatctccgcgcctacctccagtc 3067 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 568 gatgccgcagctctgatgctcaagaagaagatccacagattacc 611 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 2474 gatgcggcagctctgatgctaaagaagaagatccacagattacc 2431 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 497 gtcaaggacgaagattgcagatgtgatgacatctccagcaatcac 541 ||||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 2634 gtcaaagacgaagattgcagaagtgatgacctctccagccatcac 2590
>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full insert sequence Length = 955 Score = 155 bits (78), Expect = 2e-34 Identities = 128/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 148 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 204 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 205 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 264 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||||||| ||||||||||| Sbjct: 265 cgatctccgcgcctacctccagtc 288 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 462 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 521 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 522 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 580 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 581 atgctaaagaagaagatccacagattacc 609
>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full insert sequence Length = 916 Score = 147 bits (74), Expect = 5e-32 Identities = 127/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 124 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 183 |||| |||||||||| || |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 184 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 243 |||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259 Query: 244 cgacctccgcgcatacctccagtc 267 ||| |||| ||| ||||||||||| Sbjct: 260 cgatctccacgcctacctccagtc 283 Score = 129 bits (65), Expect = 1e-26 Identities = 129/149 (86%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 463 tcgtcaagagcgatcgcgcgagggcttcacatgggtcaaggacgaagattgcagatgtga 522 |||||||||| || || || |||||||| |||||||||| ||||||||||||||| |||| Sbjct: 457 tcgtcaagagtgaccgggccagggcttctcatgggtcaaagacgaagattgcagaagtga 516 Query: 523 tgacatctccagcaatcacgctatcatgcgataaaaacagtgaccgatgccgcagctctg 582 |||| |||||||| ||||| ||| ||| || |||||||| | ||||| ||||||||| Sbjct: 517 tgacctctccagccatcactctaccatctga-caaaacagtaatggatgcggcagctctg 575 Query: 583 atgctcaagaagaagatccacagattacc 611 ||||| ||||||||||||||||||||||| Sbjct: 576 atgctaaagaagaagatccacagattacc 604
>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence Length = 803 Score = 117 bits (59), Expect = 5e-23 Identities = 232/287 (80%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 325 ggcgctcctgcgcgaggccatgtcgacgcccgtgctgatggccacagcggaccaggcact 384 |||||||||| ||||| ||||||| || ||||||||| |||||||||| |||||| | || Sbjct: 225 ggcgctcctgagcgagaccatgtccacacccgtgctggtggccacagcagaccagaccct 284 Query: 385 ggtggaggttgaaggacacttccagcttcgtgtcaggcctcccggttgtcgacagcgccc 444 || ||| || || | |||||| || |||||| || || ||||| |||||||||| || Sbjct: 285 ggaggacgtcgagtgccacttcgaggc-cgtgtcggggcttccggtcgtcgacagcggcc 343 Query: 445 gccgatgtgtcggggtcgtcgtcaagagcgatcgcgcgagggcttcacatgggtcaagga 504 | |||| |||||||| ||||||||| ||| || || || || || |||||||| | || Sbjct: 344 tcagatgcgtcggggtgatcgtcaagaacgaccgggcaagagcctctcatgggtccaaga 403 Query: 505 cgaagattgcagatgtgatgacatctccagcaatcacgctatcatgcgataaaaacagtg 564 ||||||| | || ||||||||||||||||| ||||| ||||| | || ||||| ||| Sbjct: 404 cgaagatatcggaagtgatgacatctccagctatcacactatcgtctga-caaaaccgtg 462 Query: 565 accgatgccgcagctctgatgctcaagaagaagatccacagattacc 611 | ||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 463 atggatgctgctgttctcatgctcaagaagaagatccacagattacc 509 Score = 105 bits (53), Expect = 2e-19 Identities = 90/104 (86%) Strand = Plus / Plus Query: 164 ctccggctcgggctcgacgagaaccccgacgccatcatctccggcgagtggcccgagaac 223 |||||||||| ||| |||||||||||||| || |||||||| |||||||| |||| Sbjct: 82 ctccggctcgagctggacgagaaccccgaggcgatcatctcnnnnncgtggcccgggaac 141 Query: 224 ttctccctcctcagctacgacgacctccgcgcatacctccagtc 267 | |||||||||||||||||||||||||||||| |||||| |||| Sbjct: 142 tgctccctcctcagctacgacgacctccgcgcctacctcgagtc 185
>ref|XM_471230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 201 tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 260 |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 197 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 256 Query: 261 tccagtc 267 || |||| Sbjct: 257 tcgagtc 263
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 201 tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 260 |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 32244 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 32185 Query: 261 tccagtc 267 || |||| Sbjct: 32184 tcgagtc 32178
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 201 tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 260 |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2416342 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 2416283 Query: 261 tccagtc 267 || |||| Sbjct: 2416282 tcgagtc 2416276
>dbj|AK066843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082B01, full insert sequence Length = 964 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 201 tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 260 |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 287 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 346 Query: 261 tccagtc 267 || |||| Sbjct: 347 tcgagtc 353
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 196 catcatctccggcgagtggcccgagaacttctccctc 232 |||| ||||||||||||||| ||| |||||||||||| Sbjct: 60069 catcgtctccggcgagtggctcgataacttctccctc 60105
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 196 catcatctccggcgagtggcccgagaacttctccctc 232 |||| ||||||||||||||| ||| |||||||||||| Sbjct: 154130 catcgtctccggcgagtggctcgataacttctccctc 154166
>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence Length = 236139 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 43 caataccttgcagagctgctcca 65 ||||||||||||||||||||||| Sbjct: 100404 caataccttgcagagctgctcca 100382
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence Length = 218608 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 380 gcactggtggaggttgaaggaca 402 ||||||||||||||||||||||| Sbjct: 45589 gcactggtggaggttgaaggaca 45611
>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete sequence Length = 208332 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 380 gcactggtggaggttgaaggaca 402 ||||||||||||||||||||||| Sbjct: 192989 gcactggtggaggttgaaggaca 193011
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence Length = 186659 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gcgggctccggctcgggctcg 179 ||||||||||||||||||||| Sbjct: 12555 gcgggctccggctcgggctcg 12535
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence Length = 168986 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gcgggctccggctcgggctcg 179 ||||||||||||||||||||| Sbjct: 30479 gcgggctccggctcgggctcg 30459
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence Length = 187517 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 98299 ggacgggcgcgggctcgggctcgggctcg 98327 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 89238 ggacgggcgcgggctcgggctcgggctcg 89266 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 80055 ggacgggcgcgggctcgggctcgggctcg 80083 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 71030 ggacgggcgcgggctcgggctcgggctcg 71058 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 64607 ggacgggcgcgggctcgggctcgggctcg 64635 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 34905 ggacgggcgcgggctcgggctcgggctcg 34933
>gb|AF487888.1| Gallus gallus suppressor of fused mRNA, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gcgggctccggctcgggctcg 179 ||||||||||||||||||||| Sbjct: 43 gcgggctccggctcgggctcg 63
>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence Length = 181245 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 gcggcgggagcttcgggtgccgggc 138 ||||||||||||| ||||||||||| Sbjct: 45056 gcggcgggagcttggggtgccgggc 45080
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10) Length = 98944 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 19840 ggacgggcgcgggctcgggctcgggctcg 19868 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 10779 ggacgggcgcgggctcgggctcgggctcg 10807 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggacgggagcgggctccggctcgggctcg 179 ||||||| |||||||| |||||||||||| Sbjct: 1596 ggacgggcgcgggctcgggctcgggctcg 1624
>ref|NM_204264.1| Gallus gallus suppressor of fused homolog (Drosophila) (SUFU), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gcgggctccggctcgggctcg 179 ||||||||||||||||||||| Sbjct: 43 gcgggctccggctcgggctcg 63
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cgagaaccccgacgccatcatctcc 205 |||| |||||||||||||||||||| Sbjct: 439047 cgagcaccccgacgccatcatctcc 439071
>gb|U29204.1|HSU29204 Human mineralocorticoid receptor (hmr1a) gene, 5' untranslated region Length = 2105 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gcggcgggagcttcgggtgccgggc 138 ||||||||||||| ||||||||||| Sbjct: 623 gcggcgggagcttggggtgccgggc 599
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cgagaaccccgacgccatcatctcc 205 |||| |||||||||||||||||||| Sbjct: 87690 cgagcaccccgacgccatcatctcc 87714
>gb|U48393.1|HSU48393 Human mineralocorticoid receptor alpha (hMR) gene, promoter, exon 1 Length = 1771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gcggcgggagcttcgggtgccgggc 138 ||||||||||||| ||||||||||| Sbjct: 643 gcggcgggagcttggggtgccgggc 619
>emb|X97925.1|HSHMRPROM H.sapiens hMR gene, complete promoter region Length = 8661 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gcggcgggagcttcgggtgccgggc 138 ||||||||||||| ||||||||||| Sbjct: 2216 gcggcgggagcttggggtgccgggc 2192
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cacgccggcgatcagcaccg 321 |||||||||||||||||||| Sbjct: 2707445 cacgccggcgatcagcaccg 2707464
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 ggccgaggccagaaggggcagcag 105 ||||||||||||||||||| |||| Sbjct: 2788190 ggccgaggccagaaggggcggcag 2788213
>ref|XM_611254.2| PREDICTED: Bos taurus hypothetical LOC508098 (LOC508098), mRNA Length = 923 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 665 cgggctccggctcgggctcg 646
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 cgggagcgggctccggctcgggct 177 ||||||| |||||||||||||||| Sbjct: 1839703 cgggagccggctccggctcgggct 1839680
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gtcgacagcgcccgccgatg 451 |||||||||||||||||||| Sbjct: 1917145 gtcgacagcgcccgccgatg 1917126
>ref|NM_031392.2| Mus musculus WD repeat domain 6 (Wdr6), mRNA Length = 4169 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2724 caagggggccagggccgaggccag 2701
>ref|XM_653577.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1065.2), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 27 cgggctccggctcgggctcg 8
>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence Length = 191038 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgaggccagaaggggcagcaga 106 ||||||||||||||||||| |||| Sbjct: 122869 gccgaggccagaaggggcatcaga 122846
>ref|NM_015278.3| Homo sapiens SAM and SH3 domain containing 1 (SASH1), mRNA Length = 7709 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 cgacgagaaccccgacgccatcatctcc 205 ||||||||||| ||| |||||||||||| Sbjct: 77071 cgacgagaacctcgaggccatcatctcc 77098
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 agcggaccaggcactggtgg 389 |||||||||||||||||||| Sbjct: 3853643 agcggaccaggcactggtgg 3853662
>ref|XM_850346.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa (LOC612613), mRNA Length = 998 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 agaaggggcagcagagccgg 111 |||||||||||||||||||| Sbjct: 42 agaaggggcagcagagccgg 23
>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760) partial mRNA Length = 3087 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tcaagaagaagatccacaga 606 |||||||||||||||||||| Sbjct: 1397 tcaagaagaagatccacaga 1378
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cggcgatcagcaccgagggg 326 |||||||||||||||||||| Sbjct: 131898 cggcgatcagcaccgagggg 131917
>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence Length = 178530 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 agctctgatgctcaagaaga 595 |||||||||||||||||||| Sbjct: 171517 agctctgatgctcaagaaga 171536
>ref|XM_815829.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504153.290) partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 cgctcctgcgcgaggccatg 346 |||||||||||||||||||| Sbjct: 1571 cgctcctgcgcgaggccatg 1590
>gb|BC035951.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone IMAGE:4506719), complete cds Length = 2083 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 703 caagggggccagggccgaggccag 680
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gccgaggccagaaggggcagcaga 106 ||||||||||||||||||| |||| Sbjct: 214947 gccgaggccagaaggggcatcaga 214970
>gb|BC053993.1| Mus musculus cDNA clone IMAGE:6314898, **** WARNING: chimeric clone **** Length = 6454 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 5037 caagggggccagggccgaggccag 5014
>gb|AY351960.1|AY351960S01 Homo sapiens PEPE1 gene, exon 1 Length = 677 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on chromosome 6 Contains the 5' part of a novel gene, the 5' part of the gene for KIAA0790 protein (KIAA0790) and a CpG island, complete sequence Length = 154288 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 97968 cgggctccggctcgggctcg 97949
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 334 gcgcgaggccatgtcgacgcccgtgctg 361 |||||||||||||||| |||| |||||| Sbjct: 2872557 gcgcgaggccatgtcgtcgccagtgctg 2872530
>ref|XM_964282.1| PREDICTED: Tribolium castaneum similar to CG8639-PA (LOC657847), mRNA Length = 3999 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ggcagcggcgggagcttcgggtgc 133 |||||||||||| ||||||||||| Sbjct: 3494 ggcagcggcgggtgcttcgggtgc 3471
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 cgggagcgggctccggctcgggctcgac 181 ||||||||||||||||||| || ||||| Sbjct: 938406 cgggagcgggctccggctccggttcgac 938379
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 88969 cgggctccggctcgggctcg 88988
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gtcgacagcgcccgccgatg 451 |||||||||||||||||||| Sbjct: 75856 gtcgacagcgcccgccgatg 75837
>gb|BC054367.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:62549 IMAGE:5346943), complete cds Length = 4104 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2652 caagggggccagggccgaggccag 2629
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aagggggccaaggccgaggc 90 |||||||||||||||||||| Sbjct: 2353174 aagggggccaaggccgaggc 2353155
>gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180309 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tggaggttgaaggacacttc 406 |||||||||||||||||||| Sbjct: 146909 tggaggttgaaggacacttc 146928
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 2449373 cgggctccggctcgggctcg 2449354
>dbj|AK146617.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920035B07 product:WD repeat domain 6, full insert sequence Length = 4044 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2681 caagggggccagggccgaggccag 2658
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gtcgacagcgcccgccgatg 451 |||||||||||||||||||| Sbjct: 2567252 gtcgacagcgcccgccgatg 2567233
>dbj|AK166265.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830027A05 product:WD repeat domain 6, full insert sequence Length = 4066 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2702 caagggggccagggccgaggccag 2679
>dbj|AK163752.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030011J15 product:WD repeat domain 6, full insert sequence Length = 4019 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2657 caagggggccagggccgaggccag 2634
>dbj|AK169357.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I920192C19 product:WD repeat domain 6, full insert sequence Length = 4088 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2725 caagggggccagggccgaggccag 2702
>dbj|AK165935.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730021L06 product:WD repeat domain 6, full insert sequence Length = 4059 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2688 caagggggccagggccgaggccag 2665
>dbj|AK052235.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330012A03 product:WD REPEAT PROTEIN WDR6 homolog [Mus musculus], full insert sequence Length = 4035 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2665 caagggggccagggccgaggccag 2642
>dbj|AK046119.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230342P20 product:WD repeat domain 6, full insert sequence Length = 4056 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2692 caagggggccagggccgaggccag 2669
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cccacgccggcgatcagcac 319 |||||||||||||||||||| Sbjct: 3041393 cccacgccggcgatcagcac 3041412
>dbj|AK079258.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530062C16 product:GABA-A RECEPTOR EPSILON-LIKE SUBUNIT homolog [Mus musculus], full insert sequence Length = 1939 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 1356 cgggctccggctcgggctcg 1337
>dbj|AK037181.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030006O19 product:WD repeat domain 6, full insert sequence Length = 4063 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2701 caagggggccagggccgaggccag 2678
>gb|AF348591.1|AF348591 Mus musculus WD repeat protein WDR6 mRNA, complete cds Length = 4107 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2720 caagggggccagggccgaggccag 2697
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 cgacgagaaccccgacgccatcatctcc 205 ||||||||||| ||| |||||||||||| Sbjct: 19900004 cgacgagaacctcgaggccatcatctcc 19900031
>dbj|AK205565.1| Mus musculus cDNA, clone:Y2G0102B21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000035223, based on BLAT search Length = 137 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 106 caagggggccagggccgaggccag 83
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcgacga 183 |||||||||| ||||||||||||| Sbjct: 8133044 cgggctccggatcgggctcgacga 8133021
>dbj|AK025495.1| Homo sapiens cDNA: FLJ21842 fis, clone HEP01849 Length = 4744 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>emb|AJ335985.1|HSA335985 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NC8RS Length = 706 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>emb|AJ335962.1|HSA335962 Homo sapiens genomic sequence surrounding NotI site, clone NR1-0F24RS Length = 773 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>emb|AJ328720.1|HSA328720 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NJ6R Length = 683 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>gb|BC050894.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:63325 IMAGE:5708880), complete cds Length = 4169 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2724 caagggggccagggccgaggccag 2701
>dbj|AK063232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F06, full insert sequence Length = 751 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 cgacgagaaccccgacgccatcatctcc 205 ||||||||||| ||| |||||||||||| Sbjct: 87 cgacgagaacctcgaggccatcatctcc 114
>tpe|BN000088.1|HSA000088 TPA: TPA_exp: Homo sapiens mRNA for putative adapter and scaffold protein (SASH1 gene) Length = 7709 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-47I22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 178484 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tggaggttgaaggacacttc 406 |||||||||||||||||||| Sbjct: 135631 tggaggttgaaggacacttc 135650
>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208102 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 150766 cgggctccggctcgggctcg 150747
>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 242832 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 53543 cgggctccggctcgggctcg 53524
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 cgacgagaaccccgacgccatcatctcc 205 ||||||||||| ||| |||||||||||| Sbjct: 20184983 cgacgagaacctcgaggccatcatctcc 20185010
>emb|AJ507735.1|HSA507735 Homo sapiens mRNA for putative adapter and scaffold protein (SASH1 gene) Length = 7240 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 70 cgggctccggctcgggctcg 51
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 36579 cgggctccggctcgggctcg 36598
>dbj|AB018333.1| Homo sapiens mRNA for KIAA0790 protein, partial cds Length = 4469 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgggctccggctcgggctcg 179 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>dbj|AB041854.1| Mus musculus wdp122 mRNA for WD-repeat protein p122, complete cds Length = 4156 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caagggggccaaggccgaggccag 93 ||||||||||| |||||||||||| Sbjct: 2790 caagggggccagggccgaggccag 2767 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,144,853 Number of Sequences: 3902068 Number of extensions: 4144853 Number of successful extensions: 82184 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80608 Number of HSP's gapped (non-prelim): 1543 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
