Clone Name | basd2g13 |
---|---|
Clone Library Name | barley_pub |
>gb|AY103914.1| Zea mays PCO130298 mRNA sequence Length = 1127 Score = 248 bits (125), Expect = 1e-62 Identities = 224/257 (87%) Strand = Plus / Plus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||||||||||||| | |||||||| ||||| || |||| ||||||||| ||| Sbjct: 256 gagttctccgaggacctcaagctgttcgtcggtaacctgccgttcagcgtcgacagtgcg 315 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 316 cagctggccgggctcttcgagcaggctggctccgtcgagatggtcgaggttgtatacgat 375 Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262 |||||||| || ||||| ||||||||||||||||| |||||| ||||| ||| |||| Sbjct: 376 agaatgactgggcggagtcgtggatttggattcgtgacaatgtcttcagctgaagaagcc 435 Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322 | || || |||||||||||||| || ||||| || |||||||||||| ||||||| ||| Sbjct: 436 ggggctgctgtcgagcaattcaacggttatacatttcaaggaagacctctgagggtgaac 495 Query: 323 tccggaccaccaccacc 339 | ||| ||||| ||||| Sbjct: 496 tgcgggccaccgccacc 512
>ref|NM_193093.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1053 Score = 228 bits (115), Expect = 9e-57 Identities = 205/235 (87%) Strand = Plus / Plus Query: 90 ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149 |||||||||||||||| || || || ||||| || |||| |||||||||||||||||||| Sbjct: 294 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 353 Query: 150 ccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgatagaatga 209 | |||||||||||||||||||||||||| |||||||||||||||||||| || ||| || Sbjct: 354 cggggctcttcgagcaggccggctccgttgagatggtcgaggttgtatatgacagacaga 413 Query: 210 ccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagttgctgccg 269 ||||| | |||||||| |||||||||||||||||| | ||| ||| |||| || ||| | Sbjct: 414 ccggaagaagccgtggctttggattcgtcacaatgtctacagctgaagaagctggtgctg 473 Query: 270 ccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaactc 324 ||||||| ||||||||||| || || ||||||||||||||| ||||||| ||||| Sbjct: 474 ccgtcgaacaattcaatggatacacattccaaggaagacctctgagggtaaactc 528
>dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D01, full insert sequence Length = 1052 Score = 220 bits (111), Expect = 2e-54 Identities = 204/235 (86%) Strand = Plus / Plus Query: 90 ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149 |||||||||||||||| || || || ||||| || |||| |||||||||||||||||||| Sbjct: 294 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 353 Query: 150 ccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgatagaatga 209 | |||||||||||||||||||||||||| |||||||||||||||||||| || ||| || Sbjct: 354 cggggctcttcgagcaggccggctccgttgagatggtcgaggttgtatatgacagacaga 413 Query: 210 ccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagttgctgccg 269 ||||| | |||||||| |||||||||||||||||| | ||| ||| |||| || ||| | Sbjct: 414 ccggaagaagccgtggctttggattcgtcacaatgtctacagctgaagaagctggtgctg 473 Query: 270 ccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaactc 324 || |||| ||||||||||| || || ||||||||||||||| ||||||| ||||| Sbjct: 474 ccatcgaacaattcaatggatacacattccaaggaagacctctgagggtaaactc 528
>ref|XM_470714.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 176 bits (89), Expect = 3e-41 Identities = 215/257 (83%) Strand = Plus / Plus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| Sbjct: 241 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 300 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202 ||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||| Sbjct: 301 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggtcatctatgat 360 Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262 | |||| ||| |||| ||||| ||||| || || |||||| | ||||| |||||| Sbjct: 361 aagctgactggaaggagtcgtgggtttgggtttgtgacaatgtctagtgttgaagaagtt 420 Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322 | || || |||||||||||||||||||||| | | || ||| |||||||||||||| Sbjct: 421 gaggcagctgtcgagcaattcaatggctatatacttgatgggagatctttgagggttaac 480 Query: 323 tccggaccaccaccacc 339 || || ||||||||||| Sbjct: 481 tcagggccaccaccacc 497
>dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G07, full insert sequence Length = 1112 Score = 176 bits (89), Expect = 3e-41 Identities = 215/257 (83%) Strand = Plus / Plus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| Sbjct: 324 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 383 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202 ||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||| Sbjct: 384 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggtcatctatgat 443 Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262 | |||| ||| |||| ||||| ||||| || || |||||| | ||||| |||||| Sbjct: 444 aagctgactggaaggagtcgtgggtttgggtttgtgacaatgtctagtgttgaagaagtt 503 Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322 | || || |||||||||||||||||||||| | | || ||| |||||||||||||| Sbjct: 504 gaggcagctgtcgagcaattcaatggctatatacttgatgggagatctttgagggttaac 563 Query: 323 tccggaccaccaccacc 339 || || ||||||||||| Sbjct: 564 tcagggccaccaccacc 580
>dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L09, full insert sequence Length = 1172 Score = 176 bits (89), Expect = 3e-41 Identities = 215/257 (83%) Strand = Plus / Plus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| Sbjct: 332 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 391 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202 ||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||| Sbjct: 392 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggtcatctatgat 451 Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262 | |||| ||| |||| ||||| ||||| || || |||||| | ||||| |||||| Sbjct: 452 aagctgactggaaggagtcgtgggtttgggtttgtgacaatgtctagtgttgaagaagtt 511 Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322 | || || |||||||||||||||||||||| | | || ||| |||||||||||||| Sbjct: 512 gaggcagctgtcgagcaattcaatggctatatacttgatgggagatctttgagggttaac 571 Query: 323 tccggaccaccaccacc 339 || || ||||||||||| Sbjct: 572 tcagggccaccaccacc 588
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 1e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| Sbjct: 14706611 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 14706552 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14706551 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggt 14706502 Score = 46.1 bits (23), Expect = 0.074 Identities = 29/31 (93%) Strand = Plus / Minus Query: 309 ctttgagggttaactccggaccaccaccacc 339 |||||||||||||||| || ||||||||||| Sbjct: 14705559 ctttgagggttaactcagggccaccaccacc 14705529 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Minus Query: 251 gttgaggaagttgctgccgccgtcgagcaattcaatggctat 292 ||||| ||||||| || || ||||||||||||||||||||| Sbjct: 14705951 gttgaagaagttgaggcagctgtcgagcaattcaatggctat 14705910
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 155 bits (78), Expect = 1e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| Sbjct: 45523 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 45464 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 45463 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggt 45414 Score = 46.1 bits (23), Expect = 0.074 Identities = 29/31 (93%) Strand = Plus / Minus Query: 309 ctttgagggttaactccggaccaccaccacc 339 |||||||||||||||| || ||||||||||| Sbjct: 44471 ctttgagggttaactcagggccaccaccacc 44441 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Minus Query: 251 gttgaggaagttgctgccgccgtcgagcaattcaatggctat 292 ||||| ||||||| || || ||||||||||||||||||||| Sbjct: 44863 gttgaagaagttgaggcagctgtcgagcaattcaatggctat 44822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 1e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 83 gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142 |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| Sbjct: 14701145 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 14701086 Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14701085 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggt 14701036 Score = 46.1 bits (23), Expect = 0.074 Identities = 29/31 (93%) Strand = Plus / Minus Query: 309 ctttgagggttaactccggaccaccaccacc 339 |||||||||||||||| || ||||||||||| Sbjct: 14700093 ctttgagggttaactcagggccaccaccacc 14700063 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Minus Query: 251 gttgaggaagttgctgccgccgtcgagcaattcaatggctat 292 ||||| ||||||| || || ||||||||||||||||||||| Sbjct: 14700485 gttgaagaagttgaggcagctgtcgagcaattcaatggctat 14700444
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 133 bits (67), Expect = 4e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 90 ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149 |||||||||||||||| || || || ||||| || |||| |||||||||||||||||||| Sbjct: 26158462 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 26158521 Query: 150 ccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 26158522 cggggctcttcgagcaggccggctccgttgagatggtcgaggt 26158564 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 189 aggttgtatacgatagaatgaccggacggagccgtggatttggattcgtcacaatgggtt 248 |||||||||| || ||| ||||||| | |||||||| |||||||||||||||||| | Sbjct: 26159073 aggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtcta 26159132 Query: 249 cagttgaggaagttgctgccgccgtcgagcaattcaatgg 288 ||| ||| |||| || ||| |||||||| ||||||||||| Sbjct: 26159133 cagctgaagaagctggtgctgccgtcgaacaattcaatgg 26159172 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 3156347 tcttcgtcggcaacctcccctacacc 3156322 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ttccaaggaagacctttgagggttaactc 324 ||||||||||||||| ||||||| ||||| Sbjct: 26159554 ttccaaggaagacctctgagggtaaactc 26159582
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 133 bits (67), Expect = 4e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 90 ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149 |||||||||||||||| || || || ||||| || |||| |||||||||||||||||||| Sbjct: 50320 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 50379 Query: 150 ccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 50380 cggggctcttcgagcaggccggctccgttgagatggtcgaggt 50422 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 189 aggttgtatacgatagaatgaccggacggagccgtggatttggattcgtcacaatgggtt 248 |||||||||| || ||| ||||||| | |||||||| |||||||||||||||||| | Sbjct: 50931 aggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtcta 50990 Query: 249 cagttgaggaagttgctgccgccgtcgagcaattcaatgg 288 ||| ||| |||| || ||| |||||||| ||||||||||| Sbjct: 50991 cagctgaagaagctggtgctgccgtcgaacaattcaatgg 51030 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ttccaaggaagacctttgagggttaactc 324 ||||||||||||||| ||||||| ||||| Sbjct: 51412 ttccaaggaagacctctgagggtaaactc 51440
>gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence Length = 1109 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 98 ctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctc 157 |||| |||||||||||| ||||| || |||| |||||||||||| |||||||| || || Sbjct: 826 ctcagggtcttcgtcggtaaccttccgttcagcgtcgacagcgcccagctcgcgggactt 767 Query: 158 ttcgagcaggccggctccgtcgagatggtcgaggtt 193 |||||||||||||||||||||||||||||||||||| Sbjct: 766 ttcgagcaggccggctccgtcgagatggtcgaggtt 731
>gb|AY105580.1| Zea mays PCO127552 mRNA sequence Length = 1133 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 98 ctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctc 157 |||| |||||||||||| ||||| || |||| |||||||||||| |||||||| || || Sbjct: 305 ctcagggtcttcgtcggtaaccttccgttcagcgtcgacagcgcccagctcgcgggactt 364 Query: 158 ttcgagcaggccggctccgtcgagatggtcgaggtt 193 |||||||||||||||||||||||||||||||||||| Sbjct: 365 ttcgagcaggccggctccgtcgagatggtcgaggtt 400
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159 |||||| | |||||||||||| |||| | ||||||||||| || ||||| |||||| Sbjct: 508 caaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctctt 567 Query: 160 cgagcaggccggctccgtcgag 181 ||||||||||||| ||||||| Sbjct: 568 cgagcaggccggcgtcgtcgag 589
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 gcagagcgagggcgagggcgggggcg 71 |||||| ||||||||||||||||||| Sbjct: 80737 gcagagggagggcgagggcgggggcg 80762
>ref|XM_476683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1299 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 397 tcttcgtcggcaacctcccctacacc 422
>ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA Length = 1327 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 395 tcttcgtcggcaacctcccctacacc 420
>ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA Length = 1390 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 412 tcttcgtcggcaacctcccctacacc 437
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence Length = 1108 Score = 44.1 bits (22), Expect = 0.29 Identities = 67/82 (81%) Strand = Plus / Minus Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159 |||||||| |||||| ||||| |||| | ||||||||||| || ||||| |||||| Sbjct: 720 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 661 Query: 160 cgagcaggccggctccgtcgag 181 ||| ||||||||| ||||||| Sbjct: 660 cgaccaggccggcgtcgtcgag 639
>ref|XM_366654.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02730.4) partial mRNA Length = 1098 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 104 gtcttcgtcggcaacctccccttcac 129 ||||| |||||||||||||||||||| Sbjct: 670 gtctttgtcggcaacctccccttcac 695
>ref|XM_548299.2| PREDICTED: Canis familiaris similar to abhydrolase domain containing 1 (predicted) (LOC491179), mRNA Length = 1417 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 43 ggagcagagcgagggcgagggcgggggcga 72 ||||||| ||||||||||||||| |||||| Sbjct: 56 ggagcagggcgagggcgagggcgagggcga 27
>gb|AC102637.7| Mus musculus chromosome 6, clone RP23-216B9, complete sequence Length = 196356 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 gcagagcgagggcgagggcgggggcg 71 |||||| ||||||||||||||||||| Sbjct: 9294 gcagagggagggcgagggcgggggcg 9319
>gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC 6J18, genomic sequence Length = 111865 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 104 gtcttcgtcggcaacctccccttcac 129 ||||| |||||||||||||||||||| Sbjct: 91148 gtctttgtcggcaacctccccttcac 91173
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 71337 tcttcgtcggcaacctcccctacacc 71312
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 44.1 bits (22), Expect = 0.29 Identities = 67/82 (81%) Strand = Plus / Plus Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159 |||||||| |||||| ||||| |||| | ||||||||||| || ||||| |||||| Sbjct: 711 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 770 Query: 160 cgagcaggccggctccgtcgag 181 ||| ||||||||| ||||||| Sbjct: 771 cgaccaggccggcgtcgtcgag 792
>dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B02, full insert sequence Length = 1327 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 395 tcttcgtcggcaacctcccctacacc 420
>dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110K07, full insert sequence Length = 1299 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 397 tcttcgtcggcaacctcccctacacc 422
>dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106F16, full insert sequence Length = 1389 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttcacc 130 ||||||||||||||||||||| |||| Sbjct: 411 tcttcgtcggcaacctcccctacacc 436
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 44.1 bits (22), Expect = 0.29 Identities = 67/82 (81%) Strand = Plus / Plus Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159 |||||||| |||||| ||||| |||| | ||||||||||| || ||||| |||||| Sbjct: 498 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 557 Query: 160 cgagcaggccggctccgtcgag 181 ||| ||||||||| ||||||| Sbjct: 558 cgaccaggccggcgtcgtcgag 579
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) Length = 1251 Score = 44.1 bits (22), Expect = 0.29 Identities = 67/82 (81%) Strand = Plus / Plus Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159 |||||||| |||||| ||||| |||| | ||||||||||| || ||||| |||||| Sbjct: 498 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 557 Query: 160 cgagcaggccggctccgtcgag 181 ||| ||||||||| ||||||| Sbjct: 558 cgaccaggccggcgtcgtcgag 579
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds Length = 1161 Score = 44.1 bits (22), Expect = 0.29 Identities = 67/82 (81%) Strand = Plus / Plus Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159 |||||| | |||||||||||| |||| | ||| ||||||| || ||||| |||||| Sbjct: 383 caaggtgtacgtcggcaacctgccctacgacgtggacagcgagcgcctcgcgcagctctt 442 Query: 160 cgagcaggccggctccgtcgag 181 ||||||||||||| ||||||| Sbjct: 443 cgagcaggccggcgtcgtcgag 464
>ref|XM_468382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 509 cgacagcgcgcagctcgccgg 529
>ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_E04.28 mRNA Length = 1332 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 510 cgacagcgcgcagctcgccgg 530
>ref|NM_207381.2| Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 3 (TNFAIP8L3), mRNA Length = 2292 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ggggagcagagcgagggcgag 61 ||||||||||||||||||||| Sbjct: 380 ggggagcagagcgagggcgag 400
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 gacctcaaggtcttcgtcggcaacc 119 ||||||| ||||||||||||||||| Sbjct: 261225 gacctcacggtcttcgtcggcaacc 261201
>dbj|AK123281.1| Homo sapiens cDNA FLJ41287 fis, clone BRAMY2038484, moderately similar to Homo sapiens MDC-3.13 isoform 2 mRNA Length = 1986 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ggggagcagagcgagggcgag 61 ||||||||||||||||||||| Sbjct: 110 ggggagcagagcgagggcgag 130
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 34941505 cgacagcgcgcagctcgccgg 34941525
>gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394B5 map 15q21.2, complete sequence Length = 189796 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ggggagcagagcgagggcgag 61 ||||||||||||||||||||| Sbjct: 104521 ggggagcagagcgagggcgag 104501
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gacctcaaggtcttcgtcggcaacc 119 ||||||| ||||||||||||||||| Sbjct: 7560686 gacctcacggtcttcgtcggcaacc 7560710 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gcgagggcgagggcgggggcg 71 ||||||||||||||||||||| Sbjct: 4069509 gcgagggcgagggcgggggcg 4069529 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 agagcgagggcgagggcgggggcga 72 |||||||||||||||||| |||||| Sbjct: 2300075 agagcgagggcgagggcgagggcga 2300051 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 agcagagcgagggcgagggc 64 |||||||||||||||||||| Sbjct: 8197288 agcagagcgagggcgagggc 8197307
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 1846 cgacagcgcgcagctcgccgg 1866
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 101002 cgacagcgcgcagctcgccgg 101022
>dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B08, full insert sequence Length = 1328 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 509 cgacagcgcgcagctcgccgg 529
>dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L06, full insert sequence Length = 1332 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgacagcgcgcagctcgccgg 153 ||||||||||||||||||||| Sbjct: 510 cgacagcgcgcagctcgccgg 530
>gb|AY517501.1| Homo sapiens hypothetical protein HCSM mRNA, complete cds Length = 2292 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ggggagcagagcgagggcgag 61 ||||||||||||||||||||| Sbjct: 380 ggggagcagagcgagggcgag 400
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 gccgggctcttcgagcaggccggc 172 ||||| |||||||||||||||||| Sbjct: 1566196 gccggcctcttcgagcaggccggc 1566219
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 100 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 151
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 481 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 532
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2 mRNA Length = 1302 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 475 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 526
>ref|XM_586137.2| PREDICTED: Bos taurus similar to heme binding protein 2 (LOC509223), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcgcagctcgccgggctctt 159 |||||||||||||||||||| Sbjct: 543 gcgcagctcgccgggctctt 562
>ref|XM_589604.2| PREDICTED: Bos taurus similar to PAS domain containing serine/threonine-protein kinase (PAS-kinase) (PASKIN) (hPASK) (LOC512154), mRNA Length = 4612 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aggacgccgagggggagcagagcg 53 ||||| |||||||||||||||||| Sbjct: 2063 aggaccccgagggggagcagagcg 2086
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ccttccaaggaagacctttg 313 |||||||||||||||||||| Sbjct: 98167 ccttccaaggaagacctttg 98186
>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203038 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cgagggcgagggcgggggcg 71 |||||||||||||||||||| Sbjct: 39813 cgagggcgagggcgggggcg 39832 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cgagggcgagggcgggggcg 71 |||||||||||||||||||| Sbjct: 39788 cgagggcgagggcgggggcg 39807
>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24 Length = 294850 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cgagggcgagggcgggggcg 71 |||||||||||||||||||| Sbjct: 54937 cgagggcgagggcgggggcg 54956
>gb|AE005948.1| Caulobacter crescentus CB15 section 274 of 359 of the complete genome Length = 13101 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 agagcgagggcgagggcgggggcg 71 ||||||||||||||||| |||||| Sbjct: 1108 agagcgagggcgagggcaggggcg 1085
>dbj|AB225079.1| Aspergillus oryzae cDNA, contig sequence: AoEST1930 Length = 1152 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttca 128 |||||||||||||| ||||||||| Sbjct: 524 tcttcgtcggcaacatccccttca 547
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 tcttcgtcggcaacctccccttca 128 |||||||||||||| ||||||||| Sbjct: 1024272 tcttcgtcggcaacatccccttca 1024295
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 agttgctgccgccgtcgagcaatt 282 |||||||||||||| ||||||||| Sbjct: 4751774 agttgctgccgccgccgagcaatt 4751797
>emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-716K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168744 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccggaccaccaccacccaga 343 |||||||||||||||||||| Sbjct: 97452 ccggaccaccaccacccaga 97433
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gagcgagggcgagggcgggg 68 |||||||||||||||||||| Sbjct: 415915 gagcgagggcgagggcgggg 415934
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 gctcttcgagcaggccggctccgtcgag 181 ||||||||||||||||||| ||||||| Sbjct: 27874438 gctcttcgagcaggccggcgtcgtcgag 27874411
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgaggacctcaaggtcttcg 110 |||||||||||||||||||| Sbjct: 569743 cgaggacctcaaggtcttcg 569762
>emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173641 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccggaccaccaccacccaga 343 |||||||||||||||||||| Sbjct: 82858 ccggaccaccaccacccaga 82877
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 82540 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 82489
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 478 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 529
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 100 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 151
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 40.1 bits (20), Expect = 4.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181 ||||||||||| | |||||| ||||||||||||||||||| ||||||| Sbjct: 475 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 526
>dbj|AK113051.1| Ciona intestinalis cDNA, clone:ciad002e04, full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 cgtggatttggattcgtcacaatg 244 ||||||| |||||||||||||||| Sbjct: 733 cgtggatatggattcgtcacaatg 756
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gagcgagggcgagggcgggg 68 |||||||||||||||||||| Sbjct: 415915 gagcgagggcgagggcgggg 415934
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gagcgagggcgagggcgggg 68 |||||||||||||||||||| Sbjct: 148966 gagcgagggcgagggcgggg 148985
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gagcgagggcgagggcgggg 68 |||||||||||||||||||| Sbjct: 130857 gagcgagggcgagggcgggg 130838 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,224,407 Number of Sequences: 3902068 Number of extensions: 2224407 Number of successful extensions: 49212 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 48432 Number of HSP's gapped (non-prelim): 776 length of query: 343 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 321 effective length of database: 17,147,199,772 effective search space: 5504251126812 effective search space used: 5504251126812 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)