ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2g13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103914.1| Zea mays PCO130298 mRNA sequence 248 1e-62
2ref|NM_193093.2| Oryza sativa (japonica cultivar-group), mRNA 228 9e-57
3dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 2e-54
4ref|XM_470714.1| Oryza sativa (japonica cultivar-group), mRNA 176 3e-41
5dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clon... 176 3e-41
6dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 3e-41
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 155 1e-34
8gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom... 155 1e-34
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
11dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
12gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence 119 6e-24
13gb|AY105580.1| Zea mays PCO127552 mRNA sequence 119 6e-24
14emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31... 52 0.001
15gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, comp... 44 0.29
16ref|XM_476683.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
17ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.29
18ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.29
19gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence 44 0.29
20ref|XM_366654.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 44 0.29
21ref|XM_548299.2| PREDICTED: Canis familiaris similar to abhydrol... 44 0.29
22gb|AC102637.7| Mus musculus chromosome 6, clone RP23-216B9, comp... 44 0.29
23gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC... 44 0.29
24dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
25emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein 44 0.29
26dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
27dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
28dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
29gb|AY111861.1| Zea mays CL2457_1 mRNA sequence 44 0.29
30gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) 44 0.29
31dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds 44 0.29
32ref|XM_468382.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
33ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.1
34ref|NM_207381.2| Homo sapiens tumor necrosis factor, alpha-induc... 42 1.1
35emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 42 1.1
36dbj|AK123281.1| Homo sapiens cDNA FLJ41287 fis, clone BRAMY20384... 42 1.1
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
38gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394... 42 1.1
39dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.1
40dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
41dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
42dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
43dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
44gb|AY517501.1| Homo sapiens hypothetical protein HCSM mRNA, comp... 42 1.1
45gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.5
46ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
47ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
48ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.5
49ref|XM_586137.2| PREDICTED: Bos taurus similar to heme binding p... 40 4.5
50ref|XM_589604.2| PREDICTED: Bos taurus similar to PAS domain con... 40 4.5
51gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosom... 40 4.5
52gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Ca... 40 4.5
53emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment ... 40 4.5
54gb|AE005948.1| Caulobacter crescentus CB15 section 274 of 359 of... 40 4.5
55dbj|AB225079.1| Aspergillus oryzae cDNA, contig sequence: AoEST1930 40 4.5
56dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 4.5
57gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.5
58emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-7... 40 4.5
59dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
60dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
61dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 4.5
62emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of ... 40 4.5
63dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
64dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
65dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
66dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
67dbj|AK113051.1| Ciona intestinalis cDNA, clone:ciad002e04, full ... 40 4.5
68gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
69emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.5
70emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.5 
>gb|AY103914.1| Zea mays PCO130298 mRNA sequence
          Length = 1127

 Score =  248 bits (125), Expect = 1e-62
 Identities = 224/257 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
           |||| |||||||||||||||| | |||||||| ||||| || |||| ||||||||| |||
Sbjct: 256 gagttctccgaggacctcaagctgttcgtcggtaacctgccgttcagcgtcgacagtgcg 315

                                                                       
Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 316 cagctggccgggctcttcgagcaggctggctccgtcgagatggtcgaggttgtatacgat 375

                                                                       
Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262
           |||||||| || ||||| ||||||||||||||||| ||||||  ||||| ||| ||||  
Sbjct: 376 agaatgactgggcggagtcgtggatttggattcgtgacaatgtcttcagctgaagaagcc 435

                                                                       
Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322
           |  || || |||||||||||||| || ||||| || |||||||||||| ||||||| |||
Sbjct: 436 ggggctgctgtcgagcaattcaacggttatacatttcaaggaagacctctgagggtgaac 495

                            
Query: 323 tccggaccaccaccacc 339
           | ||| ||||| |||||
Sbjct: 496 tgcgggccaccgccacc 512
to top
>ref|NM_193093.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1053

 Score =  228 bits (115), Expect = 9e-57
 Identities = 205/235 (87%)
 Strand = Plus / Plus

                                                                       
Query: 90  ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149
           |||||||||||||||| || || || ||||| || |||| ||||||||||||||||||||
Sbjct: 294 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 353

                                                                       
Query: 150 ccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgatagaatga 209
           | |||||||||||||||||||||||||| |||||||||||||||||||| || |||  ||
Sbjct: 354 cggggctcttcgagcaggccggctccgttgagatggtcgaggttgtatatgacagacaga 413

                                                                       
Query: 210 ccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagttgctgccg 269
           ||||| | |||||||| ||||||||||||||||||  | ||| ||| |||| || ||| |
Sbjct: 414 ccggaagaagccgtggctttggattcgtcacaatgtctacagctgaagaagctggtgctg 473

                                                                  
Query: 270 ccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaactc 324
           ||||||| ||||||||||| || || ||||||||||||||| ||||||| |||||
Sbjct: 474 ccgtcgaacaattcaatggatacacattccaaggaagacctctgagggtaaactc 528
to top
>dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D01, full
           insert sequence
          Length = 1052

 Score =  220 bits (111), Expect = 2e-54
 Identities = 204/235 (86%)
 Strand = Plus / Plus

                                                                       
Query: 90  ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149
           |||||||||||||||| || || || ||||| || |||| ||||||||||||||||||||
Sbjct: 294 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 353

                                                                       
Query: 150 ccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgatagaatga 209
           | |||||||||||||||||||||||||| |||||||||||||||||||| || |||  ||
Sbjct: 354 cggggctcttcgagcaggccggctccgttgagatggtcgaggttgtatatgacagacaga 413

                                                                       
Query: 210 ccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagttgctgccg 269
           ||||| | |||||||| ||||||||||||||||||  | ||| ||| |||| || ||| |
Sbjct: 414 ccggaagaagccgtggctttggattcgtcacaatgtctacagctgaagaagctggtgctg 473

                                                                  
Query: 270 ccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaactc 324
           || |||| ||||||||||| || || ||||||||||||||| ||||||| |||||
Sbjct: 474 ccatcgaacaattcaatggatacacattccaaggaagacctctgagggtaaactc 528
to top
>ref|XM_470714.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 798

 Score =  176 bits (89), Expect = 3e-41
 Identities = 215/257 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
           |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 241 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 300

                                                                       
Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202
           ||||||||||| ||||||||||||||||||||||||||||||||||||||  | || |||
Sbjct: 301 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggtcatctatgat 360

                                                                       
Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262
           |   |||| ||| |||| ||||| ||||| || || ||||||  |   ||||| ||||||
Sbjct: 361 aagctgactggaaggagtcgtgggtttgggtttgtgacaatgtctagtgttgaagaagtt 420

                                                                       
Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322
           |  || || ||||||||||||||||||||||   |  | || ||| ||||||||||||||
Sbjct: 421 gaggcagctgtcgagcaattcaatggctatatacttgatgggagatctttgagggttaac 480

                            
Query: 323 tccggaccaccaccacc 339
           || || |||||||||||
Sbjct: 481 tcagggccaccaccacc 497
to top
>dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G07, full
           insert sequence
          Length = 1112

 Score =  176 bits (89), Expect = 3e-41
 Identities = 215/257 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
           |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 324 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 383

                                                                       
Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202
           ||||||||||| ||||||||||||||||||||||||||||||||||||||  | || |||
Sbjct: 384 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggtcatctatgat 443

                                                                       
Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262
           |   |||| ||| |||| ||||| ||||| || || ||||||  |   ||||| ||||||
Sbjct: 444 aagctgactggaaggagtcgtgggtttgggtttgtgacaatgtctagtgttgaagaagtt 503

                                                                       
Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322
           |  || || ||||||||||||||||||||||   |  | || ||| ||||||||||||||
Sbjct: 504 gaggcagctgtcgagcaattcaatggctatatacttgatgggagatctttgagggttaac 563

                            
Query: 323 tccggaccaccaccacc 339
           || || |||||||||||
Sbjct: 564 tcagggccaccaccacc 580
to top
>dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L09, full
           insert sequence
          Length = 1172

 Score =  176 bits (89), Expect = 3e-41
 Identities = 215/257 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
           |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 332 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 391

                                                                       
Query: 143 cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggttgtatacgat 202
           ||||||||||| ||||||||||||||||||||||||||||||||||||||  | || |||
Sbjct: 392 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggtcatctatgat 451

                                                                       
Query: 203 agaatgaccggacggagccgtggatttggattcgtcacaatgggttcagttgaggaagtt 262
           |   |||| ||| |||| ||||| ||||| || || ||||||  |   ||||| ||||||
Sbjct: 452 aagctgactggaaggagtcgtgggtttgggtttgtgacaatgtctagtgttgaagaagtt 511

                                                                       
Query: 263 gctgccgccgtcgagcaattcaatggctataccttccaaggaagacctttgagggttaac 322
           |  || || ||||||||||||||||||||||   |  | || ||| ||||||||||||||
Sbjct: 512 gaggcagctgtcgagcaattcaatggctatatacttgatgggagatctttgagggttaac 571

                            
Query: 323 tccggaccaccaccacc 339
           || || |||||||||||
Sbjct: 572 tcagggccaccaccacc 588
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                            
Query: 83       gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
                |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 14706611 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 14706552

                                                                  
Query: 143      cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192
                ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 14706551 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggt 14706502



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 309      ctttgagggttaactccggaccaccaccacc 339
                |||||||||||||||| || |||||||||||
Sbjct: 14705559 ctttgagggttaactcagggccaccaccacc 14705529



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 251      gttgaggaagttgctgccgccgtcgagcaattcaatggctat 292
                ||||| |||||||  || || |||||||||||||||||||||
Sbjct: 14705951 gttgaagaagttgaggcagctgtcgagcaattcaatggctat 14705910
to top
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
             sequence
          Length = 130306

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                         
Query: 83    gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
             |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 45523 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 45464

                                                               
Query: 143   cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192
             ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 45463 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggt 45414



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 309   ctttgagggttaactccggaccaccaccacc 339
             |||||||||||||||| || |||||||||||
Sbjct: 44471 ctttgagggttaactcagggccaccaccacc 44441



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 251   gttgaggaagttgctgccgccgtcgagcaattcaatggctat 292
             ||||| |||||||  || || |||||||||||||||||||||
Sbjct: 44863 gttgaagaagttgaggcagctgtcgagcaattcaatggctat 44822
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                            
Query: 83       gagtactccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcg 142
                |||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 14701145 gagttctccgacgacctgagggtcttcgtcggcaacctgcccttcagcgtcgacagcgcc 14701086

                                                                  
Query: 143      cagctcgccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192
                ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 14701085 cagctcgccggcctcttcgagcaggccggctccgtcgagatggtcgaggt 14701036



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 309      ctttgagggttaactccggaccaccaccacc 339
                |||||||||||||||| || |||||||||||
Sbjct: 14700093 ctttgagggttaactcagggccaccaccacc 14700063



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 251      gttgaggaagttgctgccgccgtcgagcaattcaatggctat 292
                ||||| |||||||  || || |||||||||||||||||||||
Sbjct: 14700485 gttgaagaagttgaggcagctgtcgagcaattcaatggctat 14700444
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                            
Query: 90       ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149
                |||||||||||||||| || || || ||||| || |||| ||||||||||||||||||||
Sbjct: 26158462 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 26158521

                                                           
Query: 150      ccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192
                | |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 26158522 cggggctcttcgagcaggccggctccgttgagatggtcgaggt 26158564



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                            
Query: 189      aggttgtatacgatagaatgaccggacggagccgtggatttggattcgtcacaatgggtt 248
                |||||||||| || |||  ||||||| | |||||||| ||||||||||||||||||  | 
Sbjct: 26159073 aggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtcta 26159132

                                                        
Query: 249      cagttgaggaagttgctgccgccgtcgagcaattcaatgg 288
                ||| ||| |||| || ||| |||||||| |||||||||||
Sbjct: 26159133 cagctgaagaagctggtgctgccgtcgaacaattcaatgg 26159172



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 105     tcttcgtcggcaacctccccttcacc 130
               ||||||||||||||||||||| ||||
Sbjct: 3156347 tcttcgtcggcaacctcccctacacc 3156322



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 296      ttccaaggaagacctttgagggttaactc 324
                ||||||||||||||| ||||||| |||||
Sbjct: 26159554 ttccaaggaagacctctgagggtaaactc 26159582
to top
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                         
Query: 90    ccgaggacctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcg 149
             |||||||||||||||| || || || ||||| || |||| ||||||||||||||||||||
Sbjct: 50320 ccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcg 50379

                                                        
Query: 150   ccgggctcttcgagcaggccggctccgtcgagatggtcgaggt 192
             | |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 50380 cggggctcttcgagcaggccggctccgttgagatggtcgaggt 50422



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                         
Query: 189   aggttgtatacgatagaatgaccggacggagccgtggatttggattcgtcacaatgggtt 248
             |||||||||| || |||  ||||||| | |||||||| ||||||||||||||||||  | 
Sbjct: 50931 aggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtcta 50990

                                                     
Query: 249   cagttgaggaagttgctgccgccgtcgagcaattcaatgg 288
             ||| ||| |||| || ||| |||||||| |||||||||||
Sbjct: 50991 cagctgaagaagctggtgctgccgtcgaacaattcaatgg 51030



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 296   ttccaaggaagacctttgagggttaactc 324
             ||||||||||||||| ||||||| |||||
Sbjct: 51412 ttccaaggaagacctctgagggtaaactc 51440
to top
>gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence
          Length = 1109

 Score =  119 bits (60), Expect = 6e-24
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                       
Query: 98  ctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctc 157
           |||| |||||||||||| ||||| || |||| |||||||||||| |||||||| || || 
Sbjct: 826 ctcagggtcttcgtcggtaaccttccgttcagcgtcgacagcgcccagctcgcgggactt 767

                                               
Query: 158 ttcgagcaggccggctccgtcgagatggtcgaggtt 193
           ||||||||||||||||||||||||||||||||||||
Sbjct: 766 ttcgagcaggccggctccgtcgagatggtcgaggtt 731
to top
>gb|AY105580.1| Zea mays PCO127552 mRNA sequence
          Length = 1133

 Score =  119 bits (60), Expect = 6e-24
 Identities = 87/96 (90%)
 Strand = Plus / Plus

                                                                       
Query: 98  ctcaaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctc 157
           |||| |||||||||||| ||||| || |||| |||||||||||| |||||||| || || 
Sbjct: 305 ctcagggtcttcgtcggtaaccttccgttcagcgtcgacagcgcccagctcgcgggactt 364

                                               
Query: 158 ttcgagcaggccggctccgtcgagatggtcgaggtt 193
           ||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttcgagcaggccggctccgtcgagatggtcgaggtt 400
to top
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein
          Length = 1318

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159
           |||||| | |||||||||||| |||| |  ||||||||||| ||  |||||   ||||||
Sbjct: 508 caaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctctt 567

                                 
Query: 160 cgagcaggccggctccgtcgag 181
           |||||||||||||  |||||||
Sbjct: 568 cgagcaggccggcgtcgtcgag 589
to top
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence
          Length = 210248

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 46    gcagagcgagggcgagggcgggggcg 71
             |||||| |||||||||||||||||||
Sbjct: 80737 gcagagggagggcgagggcgggggcg 80762
to top
>ref|XM_476683.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 105 tcttcgtcggcaacctccccttcacc 130
           ||||||||||||||||||||| ||||
Sbjct: 397 tcttcgtcggcaacctcccctacacc 422
to top
>ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA
          Length = 1327

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 105 tcttcgtcggcaacctccccttcacc 130
           ||||||||||||||||||||| ||||
Sbjct: 395 tcttcgtcggcaacctcccctacacc 420
to top
>ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA
          Length = 1390

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 105 tcttcgtcggcaacctccccttcacc 130
           ||||||||||||||||||||| ||||
Sbjct: 412 tcttcgtcggcaacctcccctacacc 437
to top
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence
          Length = 1108

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159
           |||||||| |||||| ||||| |||| |  ||||||||||| ||  |||||   ||||||
Sbjct: 720 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 661

                                 
Query: 160 cgagcaggccggctccgtcgag 181
           ||| |||||||||  |||||||
Sbjct: 660 cgaccaggccggcgtcgtcgag 639
to top
>ref|XM_366654.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02730.4) partial mRNA
          Length = 1098

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 104 gtcttcgtcggcaacctccccttcac 129
           ||||| ||||||||||||||||||||
Sbjct: 670 gtctttgtcggcaacctccccttcac 695
to top
>ref|XM_548299.2| PREDICTED: Canis familiaris similar to abhydrolase domain
          containing 1 (predicted) (LOC491179), mRNA
          Length = 1417

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 43 ggagcagagcgagggcgagggcgggggcga 72
          ||||||| ||||||||||||||| ||||||
Sbjct: 56 ggagcagggcgagggcgagggcgagggcga 27
to top
>gb|AC102637.7| Mus musculus chromosome 6, clone RP23-216B9, complete sequence
          Length = 196356

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 46   gcagagcgagggcgagggcgggggcg 71
            |||||| |||||||||||||||||||
Sbjct: 9294 gcagagggagggcgagggcgggggcg 9319
to top
>gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC 6J18, genomic sequence
          Length = 111865

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 104   gtcttcgtcggcaacctccccttcac 129
             ||||| ||||||||||||||||||||
Sbjct: 91148 gtctttgtcggcaacctccccttcac 91173
to top
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455F03
          Length = 158201

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 105   tcttcgtcggcaacctccccttcacc 130
             ||||||||||||||||||||| ||||
Sbjct: 71337 tcttcgtcggcaacctcccctacacc 71312
to top
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein
          Length = 3176

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                       
Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159
           |||||||| |||||| ||||| |||| |  ||||||||||| ||  |||||   ||||||
Sbjct: 711 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 770

                                 
Query: 160 cgagcaggccggctccgtcgag 181
           ||| |||||||||  |||||||
Sbjct: 771 cgaccaggccggcgtcgtcgag 792
to top
>dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B02, full
           insert sequence
          Length = 1327

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 105 tcttcgtcggcaacctccccttcacc 130
           ||||||||||||||||||||| ||||
Sbjct: 395 tcttcgtcggcaacctcccctacacc 420
to top
>dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110K07, full
           insert sequence
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 105 tcttcgtcggcaacctccccttcacc 130
           ||||||||||||||||||||| ||||
Sbjct: 397 tcttcgtcggcaacctcccctacacc 422
to top
>dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106F16, full
           insert sequence
          Length = 1389

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 105 tcttcgtcggcaacctccccttcacc 130
           ||||||||||||||||||||| ||||
Sbjct: 411 tcttcgtcggcaacctcccctacacc 436
to top
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence
          Length = 1273

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                       
Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159
           |||||||| |||||| ||||| |||| |  ||||||||||| ||  |||||   ||||||
Sbjct: 498 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 557

                                 
Query: 160 cgagcaggccggctccgtcgag 181
           ||| |||||||||  |||||||
Sbjct: 558 cgaccaggccggcgtcgtcgag 579
to top
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                       
Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159
           |||||||| |||||| ||||| |||| |  ||||||||||| ||  |||||   ||||||
Sbjct: 498 caaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcagctctt 557

                                 
Query: 160 cgagcaggccggctccgtcgag 181
           ||| |||||||||  |||||||
Sbjct: 558 cgaccaggccggcgtcgtcgag 579
to top
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds
          Length = 1161

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                       
Query: 100 caaggtcttcgtcggcaacctccccttcaccgtcgacagcgcgcagctcgccgggctctt 159
           |||||| | |||||||||||| |||| |  ||| ||||||| ||  |||||   ||||||
Sbjct: 383 caaggtgtacgtcggcaacctgccctacgacgtggacagcgagcgcctcgcgcagctctt 442

                                 
Query: 160 cgagcaggccggctccgtcgag 181
           |||||||||||||  |||||||
Sbjct: 443 cgagcaggccggcgtcgtcgag 464
to top
>ref|XM_468382.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1327

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 cgacagcgcgcagctcgccgg 153
           |||||||||||||||||||||
Sbjct: 509 cgacagcgcgcagctcgccgg 529
to top
>ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_E04.28
           mRNA
          Length = 1332

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 cgacagcgcgcagctcgccgg 153
           |||||||||||||||||||||
Sbjct: 510 cgacagcgcgcagctcgccgg 530
to top
>ref|NM_207381.2| Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 3
           (TNFAIP8L3), mRNA
          Length = 2292

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  ggggagcagagcgagggcgag 61
           |||||||||||||||||||||
Sbjct: 380 ggggagcagagcgagggcgag 400
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 95     gacctcaaggtcttcgtcggcaacc 119
              ||||||| |||||||||||||||||
Sbjct: 261225 gacctcacggtcttcgtcggcaacc 261201
to top
>dbj|AK123281.1| Homo sapiens cDNA FLJ41287 fis, clone BRAMY2038484, moderately
           similar to Homo sapiens MDC-3.13 isoform 2 mRNA
          Length = 1986

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  ggggagcagagcgagggcgag 61
           |||||||||||||||||||||
Sbjct: 110 ggggagcagagcgagggcgag 130
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 133      cgacagcgcgcagctcgccgg 153
                |||||||||||||||||||||
Sbjct: 34941505 cgacagcgcgcagctcgccgg 34941525
to top
>gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394B5 map 15q21.2, complete
              sequence
          Length = 189796

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     ggggagcagagcgagggcgag 61
              |||||||||||||||||||||
Sbjct: 104521 ggggagcagagcgagggcgag 104501
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 95      gacctcaaggtcttcgtcggcaacc 119
               ||||||| |||||||||||||||||
Sbjct: 7560686 gacctcacggtcttcgtcggcaacc 7560710



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 51      gcgagggcgagggcgggggcg 71
               |||||||||||||||||||||
Sbjct: 4069509 gcgagggcgagggcgggggcg 4069529



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 48      agagcgagggcgagggcgggggcga 72
               |||||||||||||||||| ||||||
Sbjct: 2300075 agagcgagggcgagggcgagggcga 2300051



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      agcagagcgagggcgagggc 64
               ||||||||||||||||||||
Sbjct: 8197288 agcagagcgagggcgagggc 8197307
to top
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0643F09
          Length = 161001

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  cgacagcgcgcagctcgccgg 153
            |||||||||||||||||||||
Sbjct: 1846 cgacagcgcgcagctcgccgg 1866
to top
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_E04
          Length = 118192

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    cgacagcgcgcagctcgccgg 153
              |||||||||||||||||||||
Sbjct: 101002 cgacagcgcgcagctcgccgg 101022
to top
>dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B08, full
           insert sequence
          Length = 1328

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 cgacagcgcgcagctcgccgg 153
           |||||||||||||||||||||
Sbjct: 509 cgacagcgcgcagctcgccgg 529
to top
>dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L06, full
           insert sequence
          Length = 1332

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 cgacagcgcgcagctcgccgg 153
           |||||||||||||||||||||
Sbjct: 510 cgacagcgcgcagctcgccgg 530
to top
>gb|AY517501.1| Homo sapiens hypothetical protein HCSM mRNA, complete cds
          Length = 2292

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  ggggagcagagcgagggcgag 61
           |||||||||||||||||||||
Sbjct: 380 ggggagcagagcgagggcgag 400
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 149     gccgggctcttcgagcaggccggc 172
               ||||| ||||||||||||||||||
Sbjct: 1566196 gccggcctcttcgagcaggccggc 1566219
to top
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
           ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 100 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 151
to top
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
           ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 481 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 532
to top
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2
           mRNA
          Length = 1302

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
           ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 475 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 526
to top
>ref|XM_586137.2| PREDICTED: Bos taurus similar to heme binding protein 2
           (LOC509223), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gcgcagctcgccgggctctt 159
           ||||||||||||||||||||
Sbjct: 543 gcgcagctcgccgggctctt 562
to top
>ref|XM_589604.2| PREDICTED: Bos taurus similar to PAS domain containing
            serine/threonine-protein kinase (PAS-kinase) (PASKIN)
            (hPASK) (LOC512154), mRNA
          Length = 4612

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 30   aggacgccgagggggagcagagcg 53
            ||||| ||||||||||||||||||
Sbjct: 2063 aggaccccgagggggagcagagcg 2086
to top
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete
             sequence
          Length = 159954

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ccttccaaggaagacctttg 313
             ||||||||||||||||||||
Sbjct: 98167 ccttccaaggaagacctttg 98186
to top
>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 203038

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    cgagggcgagggcgggggcg 71
             ||||||||||||||||||||
Sbjct: 39813 cgagggcgagggcgggggcg 39832



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    cgagggcgagggcgggggcg 71
             ||||||||||||||||||||
Sbjct: 39788 cgagggcgagggcgggggcg 39807
to top
>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24
          Length = 294850

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    cgagggcgagggcgggggcg 71
             ||||||||||||||||||||
Sbjct: 54937 cgagggcgagggcgggggcg 54956
to top
>gb|AE005948.1| Caulobacter crescentus CB15 section 274 of 359 of the complete genome
          Length = 13101

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   agagcgagggcgagggcgggggcg 71
            ||||||||||||||||| ||||||
Sbjct: 1108 agagcgagggcgagggcaggggcg 1085
to top
>dbj|AB225079.1| Aspergillus oryzae cDNA, contig sequence: AoEST1930
          Length = 1152

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 tcttcgtcggcaacctccccttca 128
           |||||||||||||| |||||||||
Sbjct: 524 tcttcgtcggcaacatccccttca 547
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 105     tcttcgtcggcaacctccccttca 128
               |||||||||||||| |||||||||
Sbjct: 1024272 tcttcgtcggcaacatccccttca 1024295
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 259     agttgctgccgccgtcgagcaatt 282
               |||||||||||||| |||||||||
Sbjct: 4751774 agttgctgccgccgccgagcaatt 4751797
to top
>emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-716K17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168744

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ccggaccaccaccacccaga 343
             ||||||||||||||||||||
Sbjct: 97452 ccggaccaccaccacccaga 97433
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     gagcgagggcgagggcgggg 68
              ||||||||||||||||||||
Sbjct: 415915 gagcgagggcgagggcgggg 415934
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 154      gctcttcgagcaggccggctccgtcgag 181
                |||||||||||||||||||  |||||||
Sbjct: 27874438 gctcttcgagcaggccggcgtcgtcgag 27874411
to top
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     cgaggacctcaaggtcttcg 110
              ||||||||||||||||||||
Sbjct: 569743 cgaggacctcaaggtcttcg 569762
to top
>emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ccggaccaccaccacccaga 343
             ||||||||||||||||||||
Sbjct: 82858 ccggaccaccaccacccaga 82877
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 130   cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
             ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 82540 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 82489
to top
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full
           insert sequence
          Length = 1230

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
           ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 478 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 529
to top
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full
           insert sequence
          Length = 927

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
           ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 100 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 151
to top
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full
           insert sequence
          Length = 1302

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 130 cgtcgacagcgcgcagctcgccgggctcttcgagcaggccggctccgtcgag 181
           ||||||||||| |   ||||||  |||||||||||||||||||  |||||||
Sbjct: 475 cgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgag 526
to top
>dbj|AK113051.1| Ciona intestinalis cDNA, clone:ciad002e04, full insert sequence
          Length = 1797

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 cgtggatttggattcgtcacaatg 244
           ||||||| ||||||||||||||||
Sbjct: 733 cgtggatatggattcgtcacaatg 756
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     gagcgagggcgagggcgggg 68
              ||||||||||||||||||||
Sbjct: 415915 gagcgagggcgagggcgggg 415934
to top
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     gagcgagggcgagggcgggg 68
              ||||||||||||||||||||
Sbjct: 148966 gagcgagggcgagggcgggg 148985
to top
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gagcgagggcgagggcgggg 68
              ||||||||||||||||||||
Sbjct: 130857 gagcgagggcgagggcgggg 130838


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,224,407
Number of Sequences: 3902068
Number of extensions: 2224407
Number of successful extensions: 49212
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 48432
Number of HSP's gapped (non-prelim): 776
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top