Clone Name | basd2g19 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KNG_ANAMI (P83857) Kininogen [Contains: Bradykinin] (Fragments) | 28 | 5.6 | 2 | MATK_MUSLA (Q8HV04) Maturase K (Intron maturase) | 28 | 7.3 | 3 | CHST9_HUMAN (Q7L1S5) Carbohydrate sulfotransferase 9 (EC 2.8.2.-... | 28 | 7.3 | 4 | VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) | 27 | 9.5 | 5 | FTHS_BACAN (Q81RE1) Formate--tetrahydrofolate ligase (EC 6.3.4.3... | 27 | 9.5 |
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>KNG_ANAMI (P83857) Kininogen [Contains: Bradykinin] (Fragments)| Length = 188 Score = 28.1 bits (61), Expect = 5.6 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = -3 Query: 196 YVFKSEAGSDQHRSLEKTSRSSFPW*AGEATSLANLPTTPSMYTTYNAFMFSRIS 32 +V SE GSD SL+ TSRS P AG +N P T Y +Y R+S Sbjct: 30 FVXYSENGSDSVYSLQFTSRSDCP--AG-----SNKPWTECDYLSYERRFNERLS 77
>MATK_MUSLA (Q8HV04) Maturase K (Intron maturase)| Length = 511 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%) Frame = +2 Query: 149 FQTSVLITSSLRLENVLLISYLTDLFTVRFYTRKLLINLL-------FCCYSG 286 + +SVLI SS +L S++ D+FT +F T +I L+ FC SG Sbjct: 338 YLSSVLINSSAVRNQMLENSFIMDIFTKKFDTIVPIIPLVRSSSKAKFCTVSG 390
>CHST9_HUMAN (Q7L1S5) Carbohydrate sulfotransferase 9 (EC 2.8.2.-)| (N-acetylgalactosamine-4-O-sulfotransferase 2) (GalNAc-4-O-sulfotransferase 2) (GALNAc-4-ST2) Length = 438 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -2 Query: 89 SHHSLNVHH-IQRIYVFEDFQVLACXQPRA 3 SHH ++ H + RIYV + ++L C P+A Sbjct: 188 SHHQSHLFHTVSRIYVEDKHKILYCEVPKA 217
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +3 Query: 219 TFLQFVFTPENC**IYCFAVILEAHIVPLSFT 314 T L+FV TPE+ +Y F V H+ +++T Sbjct: 461 TTLKFVDTPESLSGLYVFVVYFNGHVEAVAYT 492
>FTHS_BACAN (Q81RE1) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 562 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +3 Query: 6 TRLXARKDLEILENINALYVVYIEGVVGRLAREVASPAH-QGKLDLDVFSKL 158 T + D+EI + N + I + L E+ H +GKL LD+F +L Sbjct: 3 TTTTVKSDIEIAQEANMKKIQEIAADLNILEDELEPYGHYKGKLSLDIFKRL 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,094,267 Number of Sequences: 219361 Number of extensions: 753225 Number of successful extensions: 1830 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1830 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)