ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2f23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) 46 8e-05
2VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) 45 1e-04
3VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) 44 4e-04
4MST1_DROHY (Q08695) Axoneme-associated protein mst101(1) 39 0.017
5VCL_THECC (Q43358) Vicilin precursor 32 1.2
6TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein) 32 2.0
7ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disint... 31 3.5
8GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor 31 3.5
9TICN1_HUMAN (Q08629) Testican-1 precursor (SPOCK protein) 31 3.5
10MACA1_RHOOP (O84992) Maleylacetate reductase 1 (EC 1.3.1.32) (Ma... 30 6.0
11PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakar... 30 7.8
12VNCS_PAVPN (P18547) Noncapsid protein NS-1 (Nonstructural protei... 30 7.8

>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 12/154 (7%)
 Frame = +3

Query: 156  QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQ--- 326
            +G   C    +  K  A KK+C  E   +E    ++  CE +    ++ A K+QC +   
Sbjct: 963  KGKKKCKKLGKKSKRAAEKKKCA-EAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAK 1021

Query: 327  ---------QCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQ 479
                     QC      L         E    +  E  +Q    C+ + +  K  A KKQ
Sbjct: 1022 KLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKLKEAAEQK--QCEERAKKLKEAAEKKQ 1079

Query: 480  CVDECHRREHHHPSRAACERKCSHWRDPTRKERC 581
            C +E  ++E     +  CE +    ++   K++C
Sbjct: 1080 C-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQC 1112



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 30/143 (20%), Positives = 55/143 (38%)
 Frame = +3

Query: 171  CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 350
            C+ + +  K  A KKQC +E   +E     +  CE +    ++ A K+QC ++  +    
Sbjct: 1064 CEERAKKLKEAAEKKQC-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKK---- 1118

Query: 351  LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 530
                      E+  AE+          C+   +  K  A KK+C  E  ++E     +  
Sbjct: 1119 ----------EKEAAEK--------KRCEEAAKREKEAAEKKKCA-EAAKKEKEATEKQK 1159

Query: 531  CERKCSHWRDPTRKERCVXTCMR 599
            C       ++   K++C     R
Sbjct: 1160 CAEAAKKEKEAAEKKKCAEAAKR 1182



 Score = 37.7 bits (86), Expect = 0.029
 Identities = 28/150 (18%), Positives = 55/150 (36%)
 Frame = +3

Query: 150 DDQGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQ 329
           ++    +C    +  K    KK+C +E  ++E     +  CE+     ++ A K++C + 
Sbjct: 360 EEDEKKACKELAKKKKEADEKKKC-EEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEE- 417

Query: 330 CMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREH 509
                                A + E +      C+   ++ K  A KK+C  E  ++E 
Sbjct: 418 ---------------------AAKKEKEAAERKKCEELAKNIKKAAEKKKC-KEAAKKEK 455

Query: 510 HHPSRAACERKCSHWRDPTRKERCVXTCMR 599
               R  CE      +    K++C  T  +
Sbjct: 456 EAAERKKCEELAKKIKKAAEKKKCEETAKK 485



 Score = 35.0 bits (79), Expect = 0.19
 Identities = 27/137 (19%), Positives = 50/137 (36%)
 Frame = +3

Query: 171 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 350
           C    +  K  A KK+C ++   +      +  CE+     ++ A K++C +   +    
Sbjct: 511 CKKLAKKEKETAEKKKC-EKAAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKK---- 565

Query: 351 LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 530
                      R  A E +        C+   +  K  A KK+C +E  ++E     R  
Sbjct: 566 -----------RKEAAEKK-------KCEKAAKERKEAAEKKKC-EEAAKKEKEVAERKK 606

Query: 531 CERKCSHWRDPTRKERC 581
           CE      +    K++C
Sbjct: 607 CEELAKKIKKAAEKKKC 623



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 8/151 (5%)
 Frame = +3

Query: 171  CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 350
            C+   +  K  A KK+C  E   +E     +  CE      ++ A +++C +   +    
Sbjct: 671  CEKAAKKRKEAAEKKKCA-EAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKA 729

Query: 351  LXXXXXXXXIERPHAEEVEVDDQSNDSCDH------KCQH--HKVPARKKQCVDECHRRE 506
                      ++  A E     + N           KC+    K  A KK+C  E  ++E
Sbjct: 730  AEKKKCKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKC-KEAAKKE 788

Query: 507  HHHPSRAACERKCSHWRDPTRKERCVXTCMR 599
                 +  CE+     ++   K++C  T  +
Sbjct: 789  KEAAEKKKCEKTAKKRKEEAEKKKCEKTAKK 819



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/129 (19%), Positives = 49/129 (37%)
 Frame = +3

Query: 195 KVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLNLXXXXXXX 374
           K  A KK+C      ++     +A C+      ++   K++C +   +            
Sbjct: 343 KEEAEKKKCAALAKKQKEEDEKKA-CKELAKKKKEADEKKKCEEAANK------------ 389

Query: 375 XIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHW 554
             E+  AE+ +        C+   +  K  A KK+C +E  ++E     R  CE    + 
Sbjct: 390 --EKKAAEKKK--------CEKAAKERKEAAEKKKC-EEAAKKEKEAAERKKCEELAKNI 438

Query: 555 RDPTRKERC 581
           +    K++C
Sbjct: 439 KKAAEKKKC 447



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>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)|
          Length = 605

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 4/149 (2%)
 Frame = +3

Query: 141 RPVDD--QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKE 314
           R  DD  Q  + C  +CQ   +  R +   D+C  R          E +     DP R+ 
Sbjct: 32  RSEDDPQQRYEDCRKRCQ---LETRGQTEQDKCEDRSETQLK----EEQQRDGEDPQRRY 84

Query: 315 Q-CVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQ-HHKVPARKKQCVD 488
           Q C Q C +    L         E+   ++ +  D+    C  +CQ   + P RK+QCV 
Sbjct: 85  QDCRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQWQEQRPERKQQCVK 144

Query: 489 ECHRREHHHPSRAACERKCSHWRDPTRKE 575
           EC  +    P +   E K   WR+   +E
Sbjct: 145 ECREQYQEDPWKGERENK---WREEEEEE 170



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>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)|
          Length = 588

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 13/127 (10%)
 Frame = +3

Query: 201 PARKKQCVDECHSREHHHPSRASCERKCSHW------------RDPARK-EQCVQQCMRY 341
           P R + C   C         +  CE  C                DP R+ E+C Q+C + 
Sbjct: 38  PKRYEDCRRRCEWDTRGQKEQQQCEESCKSQYGEKDQQQRHRPEDPQRRYEECQQECRQQ 97

Query: 342 GLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPS 521
                       ++R   E+ +   Q  +   H  Q  + P RK+QCV EC  R   +P 
Sbjct: 98  EERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPERKQQCVRECRERYQENPW 157

Query: 522 RAACERK 542
           R   E +
Sbjct: 158 RREREEE 164



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = +3

Query: 180 KCQHH-----KVPARKKQCVDECHSREHHHPSRASCERK 281
           +CQ H     + P RK+QCV EC  R   +P R   E +
Sbjct: 126 ECQQHCHQQEQRPERKQQCVRECRERYQENPWRREREEE 164



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>MST1_DROHY (Q08695) Axoneme-associated protein mst101(1)|
          Length = 344

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
 Frame = +3

Query: 171 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 350
           C    +  K  A KK+C  E   +E     +  C       ++ A K++C +   +    
Sbjct: 109 CAEAAKKEKEAAEKKKCA-EAAKKEKEAAEKKKCAEAAKKEKEAAEKKKCAEAAKKEKEA 167

Query: 351 LXXXXXXXXIERPHAEEVEVDDQS---NDSCDHKCQHHKVPARKKQCVDECHRREHHHPS 521
                     ++    E+   +Q       C    +  K  A KK+C +E  ++E     
Sbjct: 168 AEKKKCAEAAQKKKCAELAKKEQEAAEKKKCAEAAKKEKEAAEKKKC-EERAKKEKEAAE 226

Query: 522 RAACERKCSHWRDPTRKERC 581
           +  CE +    ++   K++C
Sbjct: 227 KKKCEERAKKEKEAAEKKKC 246



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>VCL_THECC (Q43358) Vicilin precursor|
          Length = 525

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
 Frame = +3

Query: 270 CERKC-SHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKC 446
           C+R+C S   +   +EQC Q+C                ER + E+             + 
Sbjct: 45  CQRRCESEATEEREQEQCEQRC----------------EREYKEQ------------QRQ 76

Query: 447 QHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKER 578
           Q  ++  + +QC   C  ++     +  C+RKC  W     +ER
Sbjct: 77  QEEELQRQYQQCQGRCQEQQQGQREQQQCQRKC--WEQYKEQER 118



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>TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein)|
          Length = 442

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 32/125 (25%), Positives = 42/125 (33%), Gaps = 12/125 (9%)
 Frame = +3

Query: 153 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC--- 320
           D   D C  +KC  HKV   +      C SR+H  P +        HW  P+   +C   
Sbjct: 83  DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHKHWLGPSNLVKCKPC 142

Query: 321 --VQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKC------QHHKVPARKK 476
              Q  M  G +         +E  HA         N  CD  C      +  K  A K 
Sbjct: 143 PVAQSAMVCGSDGHTYTSKCKLEF-HA--CSTGKSLNSLCDGPCPCLPEPEPLKPKAEKS 199

Query: 477 QCVDE 491
            C D+
Sbjct: 200 ACTDK 204



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>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1911

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 1/125 (0%)
 Frame = +3

Query: 174  DIKCQHHKVPARKKQ-CVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 350
            D +C H  +P+   Q C  +C  R      ++ C  +C               CM+Y ++
Sbjct: 884  DKECDHLPLPSFVTQSCNTDCELRGMLLAKKSECSSQCGQGY-----RTLDIHCMKYSIH 938

Query: 351  LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 530
                           + V+VDD       H C     P  ++ C   C     H+   + 
Sbjct: 939  -------------EGQTVQVDD-------HYCGDQLKPPTQELCHGNCVFTRWHYSEWSQ 978

Query: 531  CERKC 545
            C R C
Sbjct: 979  CSRSC 983



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>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor|
          Length = 639

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
 Frame = +3

Query: 243 EHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQS 422
           E  +PS   C R C+  +D  R + C  +C    +          I RP  +  E + Q 
Sbjct: 29  EKQNPSHNKCLRSCNSEKDSYRNQACHARCNLLKVEEEEECEEGQIPRPRPQHPERERQQ 88

Query: 423 NDSCD-------------HKCQHHKVPARKKQCVDECHRREHHHPSRAACERK 542
           +   +                Q H+    +++   E HR+E  H  + + E +
Sbjct: 89  HGEKEEDEGEQPRPFPFPRPRQPHQEEEHEQKEEHEWHRKEEKHGGKGSEEEQ 141



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>TICN1_HUMAN (Q08629) Testican-1 precursor (SPOCK protein)|
          Length = 439

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +3

Query: 153 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC 320
           D   D C  +KC  HKV   +      C SR+H  P +        HW  P+   +C
Sbjct: 80  DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAQKHWVGPSNLVKC 136



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>MACA1_RHOOP (O84992) Maleylacetate reductase 1 (EC 1.3.1.32) (Maleylacetate|
           reductase I)
          Length = 357

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -1

Query: 327 AARTVPSLPGLSNGYTSSRKTPCLGDDAPGCGTRRRTVSSSPE--LYDV 187
           AART      L   Y  S  TP LG+   G  T R T++  PE  +YDV
Sbjct: 109 AARTGVDQVILPTTYAGSEVTPVLGETVEGRKTTRSTLAVLPETVIYDV 157



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>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1054

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 168 SCDIKCQHHK--VPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRY 341
           +CD  CQH+    P  K+ C  E            SC+ +C       R+  C  QC +Y
Sbjct: 45  NCDYNCQHYMECCPDFKRVCSPEL-----------SCKGRCFESFARGRECDCDSQCKQY 93

Query: 342 G 344
           G
Sbjct: 94  G 94



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>VNCS_PAVPN (P18547) Noncapsid protein NS-1 (Nonstructural protein NS1)|
          Length = 660

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 436 TTSANIIKFRRGRSSAWTSATDGSIITRAGRLARGSVAI 552
           TT A +I  +RG  ++W  ATD    +    L +G V I
Sbjct: 52  TTDAEMINLQRGAETSWDQATDMEWESEIDSLTKGQVLI 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,912,526
Number of Sequences: 219361
Number of extensions: 1536658
Number of successful extensions: 5371
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5342
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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