ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2g24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 75443 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 75400
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 118595 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 118552
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 725 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 682
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 119679 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 119636 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 95477 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 95520
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 119679 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 119636 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 95477 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 95520
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 119628 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 119585 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 95422 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 95465
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 382095 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 382138
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 123212 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 123169
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 113534 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 113491
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 31508055 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 31508098
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 368216 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 368173 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 184821 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 184778
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 84541 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 84498
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 119648 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 119605 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 95470 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 95513
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 122519 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 122562 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 14244 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 14287
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 141052 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 141095
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 93648 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 93691
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 44639 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 44596 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 20479 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 20522
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 58367 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 58324
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1268 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 1225
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 27712 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 27755
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 9268404 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 9268447 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 9227904 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 9227947 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 9164493 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 9164536 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 9056318 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 9056361
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 19938389 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 19938432 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 10387256 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 10387299 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 10277042 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 10276999
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 9241877 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 9241834
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 12825753 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 12825710
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 31598571 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 31598614
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 33525887 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 33525930
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 47654 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 47611
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 71084 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 71127
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 123478 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 123435 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 99359 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 99402
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 53090 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 53047
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 48 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 91
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 162 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 205
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 299
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 159 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 202
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 51 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 94
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 257 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 300
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 163 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 206
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 50 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 93
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 53 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 96
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 171 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 214
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 126 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 169
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 253 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 296
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 51 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 94
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 53 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 96
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 19949665 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 19949708 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 10393295 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 10393338 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 10283081 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 10283038
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 124195 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 124152 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 100036 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 100079
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 119622 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 119579 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 95417 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 95460
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 119814 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 119771 Score = 75.8 bits (38), Expect = 6e-12 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 95080 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 95123
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 43 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 86
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 232 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 275
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 202 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 159
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 132518 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 132475 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 104360 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 104403
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 136043 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 136000 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106587 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106630
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 131410 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 131367 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 103225 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 103268
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106262 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106305 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 135647 accgtgaaaacggggttgtgggagagcaa 135619
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 140103 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 140060 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 109957 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 110000
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 123417 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgct 123374 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 99320 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgct 99363
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 139329 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 139286 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 110616 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 110659
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 141851 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 141808 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 111806 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 111849
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 134724 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 134681 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 105558 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105601
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 131534 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 131491 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 101911 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 101954
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 136681 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 136638 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106876 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106919
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 254 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 297
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 1781 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 1824
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4147 accgtgaaaacggggttgtgggagagcaatataagcgttgtgct 4190
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135289 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135246 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 105747 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105790
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 46509 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 46552
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 753 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 796
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 359 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 316
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 136 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 179
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 5673 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgct 5716
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||| | || |||||||||| Sbjct: 213 accgtgaaaacggggttgtgggagagcagtacaagcgttgtgct 256
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 136334 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 136291 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106091 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106134
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135424 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135381 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 105919 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105962
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| | |||||||||| Sbjct: 257 accgtgaaaacggggttgtgggagagcaatataagcgttgtgct 300
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135422 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135379 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 105916 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105959
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135334 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135291 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 105794 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105837
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 234 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 277
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135923 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135880 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106484 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106527
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 133966 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 133923 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 104005 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 104048
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 136041 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135998 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106585 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106628
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| | |||||||||| Sbjct: 150988 accgtgaaaacggggttgtgggagagcaatataagcgttgtgct 150945 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| | |||||||||| Sbjct: 117678 accgtgaaaacggggttgtgggagagcaatataagcgttgtgct 117721
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 132511 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 132468 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 104358 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 104401
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135772 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135729 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106366 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106409
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 139456 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 139413 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 109843 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 109886
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135301 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135258 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 105761 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105804
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 4757 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 4800
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 261 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgct 304
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 4757 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 4800
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 258 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 301
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 67.9 bits (34), Expect = 2e-09 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||||||||||||||||||| | |||||||||| Sbjct: 257 accgtgaaaacggggttgtgggagagcaatataagcgttgtgct 300
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 65.9 bits (33), Expect = 6e-09 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgc 43 |||||||||||||||||||||||||||||| || |||| |||| Sbjct: 177288 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgc 177330
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 63.9 bits (32), Expect = 2e-08 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgt 38 |||||||||||||||||||||||||||||| || |||| Sbjct: 4488 accgtgaaaacggggttgtgggagagcaatacaagcgt 4525
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 63.9 bits (32), Expect = 2e-08 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgt 38 |||||||||||||||||||||||||||||| || |||| Sbjct: 23437 accgtgaaaacggggttgtgggagagcaatacaagcgt 23400
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 63.9 bits (32), Expect = 2e-08 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgt 38 |||||||||||||||||||||||||||||| || |||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 63.9 bits (32), Expect = 2e-08 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgt 38 |||||||||||||||||||||||||||||| || |||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaatacaagcgt 293
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 63.9 bits (32), Expect = 2e-08 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgt 38 |||||||||||||||||||||||||||||| || |||| Sbjct: 127607 accgtgaaaacggggttgtgggagagcaatacaagcgt 127570 Score = 63.9 bits (32), Expect = 2e-08 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgt 38 |||||||||||||||||||||||||||||| || |||| Sbjct: 107315 accgtgaaaacggggttgtgggagagcaatacaagcgt 107352
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 61.9 bits (31), Expect = 9e-08 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcg 37 |||||||||||||||||||||||||||||| || ||| Sbjct: 2024 accgtgaaaacggggttgtgggagagcaatacaagcg 2060
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 139247 accgtgaaaacggggttgtgggagagcaat 139218 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 109850 accgtgaaaacggggttgtgggagagcaat 109879
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 306 accgtgaaaacggggttgtgggagagcaat 335
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 146302 accgtgaaaacggggttgtgggagagcaat 146273 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 112160 accgtgaaaacggggttgtgggagagcaat 112189
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 132741 accgtgaaaacggggttgtgggagagcaat 132712 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 104023 accgtgaaaacggggttgtgggagagcaat 104052
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 258 accgtgaaaacggggttgtgggagagcaat 287
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 60.0 bits (30), Expect = 4e-07 Identities = 30/30 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||||||||||||||||||||||||||||| Sbjct: 47 accgtgaaaacggggttgtgggagagcaat 76
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 60.0 bits (30), Expect = 4e-07 Identities = 40/44 (90%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 ||||||||||||||||||||||||||| || || |||| ||||| Sbjct: 130278 accgtgaaaacggggttgtgggagagctatacaagcgtcgtgct 130235 Score = 60.0 bits (30), Expect = 4e-07 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 ||||||||||||||||||||||||||| || || |||| ||||| Sbjct: 102178 accgtgaaaacggggttgtgggagagctatacaagcgtcgtgct 102221
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 60.0 bits (30), Expect = 4e-07 Identities = 40/44 (90%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 ||||||||||||||||||||||||||| || || |||| ||||| Sbjct: 487 accgtgaaaacggggttgtgggagagcgatacaagcgtcgtgct 444
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaa 284
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 2301 accgtgaaaacggggttgtgggagagcaa 2329
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 133702 accgtgaaaacggggttgtgggagagcaa 133674 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 104947 accgtgaaaacggggttgtgggagagcaa 104975
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 117892 accgtgaaaacggggttgtgggagagcaa 117864 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 ||||||||||||||||||||||||||||| Sbjct: 90210 accgtgaaaacggggttgtgggagagcaa 90238
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 56.0 bits (28), Expect = 6e-06 Identities = 28/28 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagca 28 |||||||||||||||||||||||||||| Sbjct: 88605 accgtgaaaacggggttgtgggagagca 88632
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 54.0 bits (27), Expect = 2e-05 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 ||||||||||||||||||||||||||| Sbjct: 86519 accgtgaaaacggggttgtgggagagc 86545
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 54.0 bits (27), Expect = 2e-05 Identities = 27/27 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagc 27 ||||||||||||||||||||||||||| Sbjct: 131613 accgtgaaaacggggttgtgggagagc 131587 Score = 54.0 bits (27), Expect = 2e-05 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 ||||||||||||||||||||||||||| Sbjct: 103781 accgtgaaaacggggttgtgggagagc 103807
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 54.0 bits (27), Expect = 2e-05 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 ||||||||||||||||||||||||||| Sbjct: 2857 accgtgaaaacggggttgtgggagagc 2883
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 54.0 bits (27), Expect = 2e-05 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 ||||||||||||||||||||||||||| Sbjct: 1112 accgtgaaaacggggttgtgggagagc 1138
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 52.0 bits (26), Expect = 9e-05 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||| ||||||||||||||||||||||||| Sbjct: 52429 accgcgaaaacggggttgtgggagagcaat 52400 Score = 52.0 bits (26), Expect = 9e-05 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||| ||||||||||||||||||||||||| Sbjct: 37399 accgcgaaaacggggttgtgggagagcaat 37428
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 52.0 bits (26), Expect = 9e-05 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||| ||||||||||||||||||||||||| Sbjct: 257 accgcgaaaacggggttgtgggagagcaat 286
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 52.0 bits (26), Expect = 9e-05 Identities = 33/36 (91%) Strand = Plus / Minus Query: 7 aaaacggggttgtgggagagcaatncangcgttgtg 42 |||||||||||||||||||||||| | |||||||| Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtg 6249
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 52.0 bits (26), Expect = 9e-05 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagag 26 |||||||||||||||||||||||||| Sbjct: 142622 accgtgaaaacggggttgtgggagag 142597 Score = 52.0 bits (26), Expect = 9e-05 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagag 26 |||||||||||||||||||||||||| Sbjct: 110706 accgtgaaaacggggttgtgggagag 110731
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 52.0 bits (26), Expect = 9e-05 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 |||| ||||||||||||||||||||||||| Sbjct: 4327 accgcgaaaacggggttgtgggagagcaat 4356
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 52.0 bits (26), Expect = 9e-05 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||||||||| ||||||||||||||| || |||| ||||| Sbjct: 358 accgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgct 400
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 50.1 bits (25), Expect = 4e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagcaa 29 |||||||||||||||||||||| |||||| Sbjct: 258 accgtgaaaacggggttgtgggggagcaa 286
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 46.1 bits (23), Expect = 0.006 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||||||||||||||||||||| |||| Sbjct: 258 accgtgaaaacggggttgtgggggagc 284
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 46.1 bits (23), Expect = 0.006 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||||||||||||||||||||| |||| Sbjct: 241 accgtgaaaacggggttgtgggggagc 267
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 46.1 bits (23), Expect = 0.006 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||||||||||||||||||||| |||| Sbjct: 128189 accgtgaaaacggggttgtgggggagc 128163 Score = 46.1 bits (23), Expect = 0.006 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||||||||||||||||||||| |||| Sbjct: 95258 accgtgaaaacggggttgtgggggagc 95284
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 44.1 bits (22), Expect = 0.022 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagag 26 |||||||| ||||||||||||||||| Sbjct: 144177 accgtgaagacggggttgtgggagag 144202 Score = 44.1 bits (22), Expect = 0.022 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagag 26 |||||||| ||||||||||||||||| Sbjct: 88674 accgtgaagacggggttgtgggagag 88649
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 42.1 bits (21), Expect = 0.086 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggaga 25 ||||||||| ||||||||||||||| Sbjct: 259 accgtgaaagcggggttgtgggaga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 42.1 bits (21), Expect = 0.086 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggaga 25 ||||||||| ||||||||||||||| Sbjct: 3293 accgtgaaagcggggttgtgggaga 3317
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 42.1 bits (21), Expect = 0.086 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgg 21 ||||||||||||||||||||| Sbjct: 79513 accgtgaaaacggggttgtgg 79493
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 0.34 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggag 24 |||||||||||||||||| ||||| Sbjct: 3148002 accgtgaaaacggggttgagggag 3147979
>dbj|AP006655.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09O10, TM0341, complete sequence Length = 69777 Score = 40.1 bits (20), Expect = 0.34 Identities = 36/42 (85%) Strand = Plus / Plus Query: 3 cgtgaaaacggggttgtgggagagcaatncangcgttgtgct 44 |||||||| || ||||||||||||| || || || ||||||| Sbjct: 34558 cgtgaaaatggagttgtgggagagctatacaagcattgtgct 34599
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gaaaacggggttgtgggag 24 ||||||||||||||||||| Sbjct: 988534 gaaaacggggttgtgggag 988516
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 aacggggttgtgggagagc 27 ||||||||||||||||||| Sbjct: 139005 aacggggttgtgggagagc 138987 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 aacggggttgtgggagagc 27 ||||||||||||||||||| Sbjct: 82872 aacggggttgtgggagagc 82890
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 38.2 bits (19), Expect = 1.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||| |||| ||||||||||||||||| Sbjct: 259 accgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 38.2 bits (19), Expect = 1.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||| |||| ||||||||||||||||| Sbjct: 125006 accgcgaaagcggggttgtgggagagc 124980 Score = 38.2 bits (19), Expect = 1.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 1 accgtgaaaacggggttgtgggagagc 27 |||| |||| ||||||||||||||||| Sbjct: 94860 accgcgaaagcggggttgtgggagagc 94886
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 36.2 bits (18), Expect = 5.3 Identities = 27/30 (90%) Strand = Plus / Minus Query: 1 accgtgaaaacggggttgtgggagagcaat 30 ||||| |||| | ||||||||||||||||| Sbjct: 3557 accgtaaaaatgaggttgtgggagagcaat 3528
>gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome 6, complete sequence Length = 179698 Score = 36.2 bits (18), Expect = 5.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ggggttgtgggagagcaa 29 |||||||||||||||||| Sbjct: 147531 ggggttgtgggagagcaa 147514 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 115,626 Number of Sequences: 3902068 Number of extensions: 115626 Number of successful extensions: 30868 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30553 Number of HSP's gapped (non-prelim): 314 length of query: 44 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 24 effective length of database: 17,155,003,908 effective search space: 411720093792 effective search space used: 411720093792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
