Clone Name | basd2g18 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5781 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ctccttgttcgccagcttta 221 |||||||||||||||||||| Sbjct: 4869 ctccttgttcgccagcttta 4850
>ref|XM_464427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3544 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctttactgtctccttgttcg 212 |||||||||||||||||||| Sbjct: 2082 ctttactgtctccttgttcg 2063
>gb|BC028712.1| Homo sapiens ankyrin repeat domain 19, mRNA (cDNA clone MGC:27029 IMAGE:4837806), complete cds Length = 2351 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acaagctctgaagactgtgg 169 |||||||||||||||||||| Sbjct: 2170 acaagctctgaagactgtgg 2151
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ctccttgttcgccagcttta 221 |||||||||||||||||||| Sbjct: 25400959 ctccttgttcgccagcttta 25400978 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctttactgtctccttgttcg 212 |||||||||||||||||||| Sbjct: 5149219 ctttactgtctccttgttcg 5149200
>gb|AC084451.1|AC084451 Caenorhabditis briggsae cosmid CB023N02, complete sequence Length = 79813 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctgatgaaatcgacacttgt 36 |||||||||||||||||||| Sbjct: 52048 ctgatgaaatcgacacttgt 52067
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctttactgtctccttgttcg 212 |||||||||||||||||||| Sbjct: 109717 ctttactgtctccttgttcg 109698
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ctccttgttcgccagcttta 221 |||||||||||||||||||| Sbjct: 56621 ctccttgttcgccagcttta 56640
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctttactgtctccttgttcg 212 |||||||||||||||||||| Sbjct: 42672 ctttactgtctccttgttcg 42653
>dbj|AK120559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131N16, full insert sequence Length = 5783 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ctccttgttcgccagcttta 221 |||||||||||||||||||| Sbjct: 4871 ctccttgttcgccagcttta 4852
>dbj|AK110819.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-G07, full insert sequence Length = 1697 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctttactgtctccttgttcg 212 |||||||||||||||||||| Sbjct: 652 ctttactgtctccttgttcg 633
>dbj|AK072184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H24, full insert sequence Length = 3544 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctttactgtctccttgttcg 212 |||||||||||||||||||| Sbjct: 2082 ctttactgtctccttgttcg 2063 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,054,244 Number of Sequences: 3902068 Number of extensions: 2054244 Number of successful extensions: 36047 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36012 Number of HSP's gapped (non-prelim): 35 length of query: 317 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 295 effective length of database: 17,147,199,772 effective search space: 5058423932740 effective search space used: 5058423932740 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)